ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal39f10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_469788.1| Oryza sativa (japonica cultivar-group), mRNA 111 1e-21
2dbj|AK122157.1| Oryza sativa (japonica cultivar-group) cDNA clon... 111 1e-21
3gb|AF377947.3| Oryza sativa (japonica cultivar-group) chromosome... 107 2e-20
4gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 107 2e-20
5gb|AC092556.8| Oryza sativa chromosome 3 BAC OSJNBa0047E24 genom... 107 2e-20
6gb|AC135225.4| Oryza sativa chromosome 3 BAC OJ1112_G08 genomic ... 107 2e-20
7dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 107 2e-20
8gb|AC182696.2| Populus trichocarpa clone Pop1-69I10, complete se... 44 0.20
9gb|AC063944.25| Homo sapiens 3 BAC RP11-446H18 (Roswell Park Can... 44 0.20
10gb|AC090900.3| Drosophila melanogaster clone BACR30C07, complete... 42 0.79
11emb|AL034349.3|HS86D1 Human DNA sequence from clone RP1-86D1 on ... 42 0.79
12gb|AC026464.7| Homo sapiens chromosome 16 clone RP11-343C2, comp... 42 0.79
13gb|AC020892.7|AC020892 Homo sapiens chromosome 15 clone RP11-313... 42 0.79
14gb|AE003812.4| Drosophila melanogaster chromosome 2R, section 38... 42 0.79
15gb|AC004306.1|AC004306 Drosophila melanogaster DNA sequence (P1 ... 42 0.79
16gb|AC087552.3| Oryza sativa (japonica cultivar-group) chromosome... 40 3.1
17gb|AC136843.6| Oryza sativa (japonica cultivar-group) chromosome... 40 3.1
18gb|AY763719.1| Trichopsis pumila 12S ribosomal RNA gene, partial... 40 3.1
19gb|AC116694.9| Mus musculus chromosome 7, clone RP24-386G12, com... 40 3.1
20gb|AC122212.2| Mus musculus BAC clone RP23-99K17 from 10, comple... 40 3.1
21emb|AL451146.7| Human DNA sequence from clone RP11-510K18 on chr... 40 3.1
22emb|AL359881.28| Human DNA sequence from clone RP11-338N10 on ch... 40 3.1
23emb|BX842608.1|OSJN00298 Oryza sativa genomic DNA, chromosome 4,... 40 3.1
24emb|AL662964.3|OSJN00161 Oryza sativa genomic DNA, chromosome 4,... 40 3.1
25dbj|AP007166.1| Aspergillus oryzae RIB40 genomic DNA, SC113 40 3.1
26gb|AC107383.3| Homo sapiens BAC clone RP11-125C20 from 4, comple... 40 3.1
27gb|AC098965.2| Homo sapiens chromosome 16 clone RP11-419L9, comp... 40 3.1
28gb|AC125783.2| Oryza sativa (japonica cultivar-group) chromosome... 40 3.1
29dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.1
30dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.1
31dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.1
32dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.1
33dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.1
34dbj|AP004730.2| Oryza sativa (japonica cultivar-group) genomic D... 40 3.1
35dbj|AP004328.2| Oryza sativa (japonica cultivar-group) genomic D... 40 3.1
36dbj|AP006456.4| Oryza sativa (japonica cultivar-group) genomic D... 40 3.1
37dbj|AP006459.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.1
38gb|AC153535.4| Mus musculus 10 BAC RP23-398N22 (Roswell Park Can... 40 3.1
39gb|AC153562.2| Mus musculus 10 BAC RP23-143D12 (Roswell Park Can... 40 3.1
40gb|AY829092.1| Illiosentis sp. MGV-2005 28S ribosomal RNA gene, ... 40 3.1
41gb|AC153560.5| Mus musculus 10 BAC RP23-376E10 (Roswell Park Can... 40 3.1
42gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 3.1 
>ref|XM_469788.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2465

 Score =  111 bits (56), Expect = 1e-21
 Identities = 89/100 (89%)
 Strand = Plus / Plus

                                                                        
Query: 111  cgaaagagaaaaaaggctgaagctttgcgactggttgacatggagaagagacaaaaacaa 170
            ||||| |||||||||||||||||  ||||| |  ||||||||||||||||||||||||||
Sbjct: 1651 cgaaaaagaaaaaaggctgaagcaatgcgattacttgacatggagaagagacaaaaacaa 1710

                                                    
Query: 171  agattggaagaagtccgtgaaacacaaagaaagagtgaag 210
            ||||| ||||||||||||||| ||||  |||||| |||||
Sbjct: 1711 agattagaagaagtccgtgaatcacagcgaaagaatgaag 1750



 Score =  111 bits (56), Expect = 1e-21
 Identities = 84/92 (91%), Gaps = 1/92 (1%)
 Strand = Plus / Plus

                                                                        
Query: 1    aaagcacaaagaatctgatgagtacaaaagggcacaagaggaggagtgggcatccagaca 60
            ||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||
Sbjct: 1551 aaagcacaaagaatccgatgagtacaaacgggcacaggaggaggagtgggcatccagaca 1610

                                            
Query: 61   gcgtcagtttagcaatacaggctgaggaggca 92
            ||||||  |  | |||||||||||||||||||
Sbjct: 1611 gcgtcaactgcg-aatacaggctgaggaggca 1641
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>dbj|AK122157.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033145P19, full
            insert sequence
          Length = 2647

 Score =  111 bits (56), Expect = 1e-21
 Identities = 84/92 (91%), Gaps = 1/92 (1%)
 Strand = Plus / Plus

                                                                        
Query: 1    aaagcacaaagaatctgatgagtacaaaagggcacaagaggaggagtgggcatccagaca 60
            ||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||
Sbjct: 1801 aaagcacaaagaatccgatgagtacaaacgggcacaggaggaggagtgggcatccagaca 1860

                                            
Query: 61   gcgtcagtttagcaatacaggctgaggaggca 92
            ||||||  |  | |||||||||||||||||||
Sbjct: 1861 gcgtcaactgcg-aatacaggctgaggaggca 1891



 Score = 95.6 bits (48), Expect = 6e-17
 Identities = 87/100 (87%)
 Strand = Plus / Plus

                                                                        
Query: 111  cgaaagagaaaaaaggctgaagctttgcgactggttgacatggagaagagacaaaaacaa 170
            ||||| |||||||||||||||||  ||||| |  |||||||||||||||||| |||||||
Sbjct: 1901 cgaaaaagaaaaaaggctgaagcaatgcgattacttgacatggagaagagacgaaaacaa 1960

                                                    
Query: 171  agattggaagaagtccgtgaaacacaaagaaagagtgaag 210
            |||||  |||||||||||||| ||||  |||||| |||||
Sbjct: 1961 agattacaagaagtccgtgaatcacagcgaaagaatgaag 2000
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>gb|AF377947.3| Oryza sativa (japonica cultivar-group) chromosome 3, BAC clone
             OSJNBa0032E21, complete sequence
          Length = 137580

 Score =  107 bits (54), Expect = 2e-20
 Identities = 63/66 (95%)
 Strand = Plus / Minus

                                                                         
Query: 1     aaagcacaaagaatctgatgagtacaaaagggcacaagaggaggagtgggcatccagaca 60
             ||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||
Sbjct: 66910 aaagcacaaagaatccgatgagtacaaacgggcacaggaggaggagtgggcatccagaca 66851

                   
Query: 61    gcgtca 66
             ||||||
Sbjct: 66850 gcgtca 66845



 Score =  107 bits (54), Expect = 2e-20
 Identities = 78/86 (90%)
 Strand = Plus / Minus

                                                                         
Query: 111   cgaaagagaaaaaaggctgaagctttgcgactggttgacatggagaagagacaaaaacaa 170
             ||||| |||||||||||||||||  ||||| |  ||||||||||||||||||||||||||
Sbjct: 66545 cgaaaaagaaaaaaggctgaagcaatgcgattacttgacatggagaagagacaaaaacaa 66486

                                       
Query: 171   agattggaagaagtccgtgaaacaca 196
             ||||| ||||||||||||||| ||||
Sbjct: 66485 agattagaagaagtccgtgaatcaca 66460
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  107 bits (54), Expect = 2e-20
 Identities = 78/86 (90%)
 Strand = Plus / Plus

                                                                            
Query: 111      cgaaagagaaaaaaggctgaagctttgcgactggttgacatggagaagagacaaaaacaa 170
                ||||| |||||||||||||||||  ||||| |  ||||||||||||||||||||||||||
Sbjct: 30737238 cgaaaaagaaaaaaggctgaagcaatgcgattacttgacatggagaagagacaaaaacaa 30737297

                                          
Query: 171      agattggaagaagtccgtgaaacaca 196
                ||||| ||||||||||||||| ||||
Sbjct: 30737298 agattagaagaagtccgtgaatcaca 30737323



 Score =  107 bits (54), Expect = 2e-20
 Identities = 63/66 (95%)
 Strand = Plus / Plus

                                                                            
Query: 1        aaagcacaaagaatctgatgagtacaaaagggcacaagaggaggagtgggcatccagaca 60
                ||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||
Sbjct: 30736873 aaagcacaaagaatccgatgagtacaaacgggcacaggaggaggagtgggcatccagaca 30736932

                      
Query: 61       gcgtca 66
                ||||||
Sbjct: 30736933 gcgtca 30736938
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>gb|AC092556.8| Oryza sativa chromosome 3 BAC OSJNBa0047E24 genomic sequence, complete
             sequence
          Length = 157970

 Score =  107 bits (54), Expect = 2e-20
 Identities = 63/66 (95%)
 Strand = Plus / Minus

                                                                         
Query: 1     aaagcacaaagaatctgatgagtacaaaagggcacaagaggaggagtgggcatccagaca 60
             ||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||
Sbjct: 25517 aaagcacaaagaatccgatgagtacaaacgggcacaggaggaggagtgggcatccagaca 25458

                   
Query: 61    gcgtca 66
             ||||||
Sbjct: 25457 gcgtca 25452



 Score =  107 bits (54), Expect = 2e-20
 Identities = 78/86 (90%)
 Strand = Plus / Minus

                                                                         
Query: 111   cgaaagagaaaaaaggctgaagctttgcgactggttgacatggagaagagacaaaaacaa 170
             ||||| |||||||||||||||||  ||||| |  ||||||||||||||||||||||||||
Sbjct: 25152 cgaaaaagaaaaaaggctgaagcaatgcgattacttgacatggagaagagacaaaaacaa 25093

                                       
Query: 171   agattggaagaagtccgtgaaacaca 196
             ||||| ||||||||||||||| ||||
Sbjct: 25092 agattagaagaagtccgtgaatcaca 25067
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>gb|AC135225.4| Oryza sativa chromosome 3 BAC OJ1112_G08 genomic sequence, complete
             sequence
          Length = 128294

 Score =  107 bits (54), Expect = 2e-20
 Identities = 78/86 (90%)
 Strand = Plus / Plus

                                                                         
Query: 111   cgaaagagaaaaaaggctgaagctttgcgactggttgacatggagaagagacaaaaacaa 170
             ||||| |||||||||||||||||  ||||| |  ||||||||||||||||||||||||||
Sbjct: 45939 cgaaaaagaaaaaaggctgaagcaatgcgattacttgacatggagaagagacaaaaacaa 45998

                                       
Query: 171   agattggaagaagtccgtgaaacaca 196
             ||||| ||||||||||||||| ||||
Sbjct: 45999 agattagaagaagtccgtgaatcaca 46024



 Score =  107 bits (54), Expect = 2e-20
 Identities = 63/66 (95%)
 Strand = Plus / Plus

                                                                         
Query: 1     aaagcacaaagaatctgatgagtacaaaagggcacaagaggaggagtgggcatccagaca 60
             ||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||
Sbjct: 45574 aaagcacaaagaatccgatgagtacaaacgggcacaggaggaggagtgggcatccagaca 45633

                   
Query: 61    gcgtca 66
             ||||||
Sbjct: 45634 gcgtca 45639
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  107 bits (54), Expect = 2e-20
 Identities = 78/86 (90%)
 Strand = Plus / Plus

                                                                            
Query: 111      cgaaagagaaaaaaggctgaagctttgcgactggttgacatggagaagagacaaaaacaa 170
                ||||| |||||||||||||||||  ||||| |  ||||||||||||||||||||||||||
Sbjct: 30828662 cgaaaaagaaaaaaggctgaagcaatgcgattacttgacatggagaagagacaaaaacaa 30828721

                                          
Query: 171      agattggaagaagtccgtgaaacaca 196
                ||||| ||||||||||||||| ||||
Sbjct: 30828722 agattagaagaagtccgtgaatcaca 30828747



 Score =  107 bits (54), Expect = 2e-20
 Identities = 63/66 (95%)
 Strand = Plus / Plus

                                                                            
Query: 1        aaagcacaaagaatctgatgagtacaaaagggcacaagaggaggagtgggcatccagaca 60
                ||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||
Sbjct: 30828297 aaagcacaaagaatccgatgagtacaaacgggcacaggaggaggagtgggcatccagaca 30828356

                      
Query: 61       gcgtca 66
                ||||||
Sbjct: 30828357 gcgtca 30828362
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>gb|AC182696.2| Populus trichocarpa clone Pop1-69I10, complete sequence
          Length = 92421

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 192   acacaaagaaagagtgaagaaa 213
             ||||||||||||||||||||||
Sbjct: 64005 acacaaagaaagagtgaagaaa 64026
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>gb|AC063944.25| Homo sapiens 3 BAC RP11-446H18 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 180389

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 160    gacaaaaacaaagattggaaga 181
              ||||||||||||||||||||||
Sbjct: 122832 gacaaaaacaaagattggaaga 122811
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>gb|AC090900.3| Drosophila melanogaster clone BACR30C07, complete sequence
          Length = 186286

 Score = 42.1 bits (21), Expect = 0.79
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 84     gaggaggcaaaggaggcgaag 104
              |||||||||||||||||||||
Sbjct: 106913 gaggaggcaaaggaggcgaag 106893
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>emb|AL034349.3|HS86D1 Human DNA sequence from clone RP1-86D1 on chromosome 6q22.2-23.1
             Contains two novel genes and the 5' end of the PTPRK gene
             for protein tyrosine phosphatase, receptor type K
             (R-PTP-KAPPA) and a CpG island, complete sequence
          Length = 112604

 Score = 42.1 bits (21), Expect = 0.79
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 112   gaaagagaaaaaaggctgaag 132
             |||||||||||||||||||||
Sbjct: 64632 gaaagagaaaaaaggctgaag 64612
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>gb|AC026464.7| Homo sapiens chromosome 16 clone RP11-343C2, complete sequence
          Length = 190185

 Score = 42.1 bits (21), Expect = 0.79
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 195    caaagaaagagtgaagaaact 215
              |||||||||||||||||||||
Sbjct: 171963 caaagaaagagtgaagaaact 171943
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>gb|AC020892.7|AC020892 Homo sapiens chromosome 15 clone RP11-313P18 map 15q21.2, complete
             sequence
          Length = 186253

 Score = 42.1 bits (21), Expect = 0.79
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 188   tgaaacacaaagaaagagtgaagaa 212
             ||||| |||||||||||||||||||
Sbjct: 62980 tgaaagacaaagaaagagtgaagaa 62956
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>gb|AE003812.4| Drosophila melanogaster chromosome 2R, section 38 of 73 of the complete
              sequence
          Length = 255772

 Score = 42.1 bits (21), Expect = 0.79
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 84     gaggaggcaaaggaggcgaag 104
              |||||||||||||||||||||
Sbjct: 231770 gaggaggcaaaggaggcgaag 231750
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>gb|AC004306.1|AC004306 Drosophila melanogaster DNA sequence (P1 DS01386 (D198)), complete
             sequence
          Length = 61849

 Score = 42.1 bits (21), Expect = 0.79
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 84    gaggaggcaaaggaggcgaag 104
             |||||||||||||||||||||
Sbjct: 58676 gaggaggcaaaggaggcgaag 58656
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>gb|AC087552.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0519E07,
             complete sequence
          Length = 151399

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 172   gattggaagaagtccgtgaa 191
             ||||||||||||||||||||
Sbjct: 71181 gattggaagaagtccgtgaa 71200
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>gb|AC136843.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0094M06, complete sequence
          Length = 135583

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 172   gattggaagaagtccgtgaa 191
             ||||||||||||||||||||
Sbjct: 65367 gattggaagaagtccgtgaa 65348
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>gb|AY763719.1| Trichopsis pumila 12S ribosomal RNA gene, partial sequence; tRNA-Val
            gene, complete sequence; and 16S ribosomal RNA gene,
            partial sequence; mitochondrial
          Length = 2068

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 203  gagtgaagaaactatacagctgaa 226
            |||||||||||||||| |||||||
Sbjct: 1003 gagtgaagaaactataaagctgaa 980
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>gb|AC116694.9| Mus musculus chromosome 7, clone RP24-386G12, complete sequence
          Length = 195638

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 191   aacacaaagaaagagtgaag 210
             ||||||||||||||||||||
Sbjct: 78928 aacacaaagaaagagtgaag 78909
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>gb|AC122212.2| Mus musculus BAC clone RP23-99K17 from 10, complete sequence
          Length = 198928

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 163   aaaaacaaagattggaagaagtcc 186
             ||||| ||||||||||||||||||
Sbjct: 94733 aaaaaaaaagattggaagaagtcc 94710
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>emb|AL451146.7| Human DNA sequence from clone RP11-510K18 on chromosome 10 Contains a
              serine/threonine protein kinase pseudogene, complete
              sequence
          Length = 200891

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 154    agaagagacaaaaacaaaga 173
              ||||||||||||||||||||
Sbjct: 164394 agaagagacaaaaacaaaga 164413
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>emb|AL359881.28| Human DNA sequence from clone RP11-338N10 on chromosome 1 Contains part
             of the CAMTA1 gene for calmodulin binding transcription
             activator 1 and two CpG islands, complete sequence
          Length = 65922

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 81    gctgaggaggcaaaggaggc 100
             ||||||||||||||||||||
Sbjct: 61023 gctgaggaggcaaaggaggc 61004
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>emb|BX842608.1|OSJN00298 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1340F09, complete
              sequence
          Length = 149449

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 172    gattggaagaagtccgtgaa 191
              ||||||||||||||||||||
Sbjct: 131465 gattggaagaagtccgtgaa 131484
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>emb|AL662964.3|OSJN00161 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027H09,
             complete sequence
          Length = 155672

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 172   gattggaagaagtccgtgaa 191
             ||||||||||||||||||||
Sbjct: 83781 gattggaagaagtccgtgaa 83800
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>dbj|AP007166.1| Aspergillus oryzae RIB40 genomic DNA, SC113
          Length = 1841713

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 155     gaagagacaaaaacaaagat 174
               ||||||||||||||||||||
Sbjct: 1241284 gaagagacaaaaacaaagat 1241303
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>gb|AC107383.3| Homo sapiens BAC clone RP11-125C20 from 4, complete sequence
          Length = 173808

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 141   ctggttgacatggagaagag 160
             ||||||||||||||||||||
Sbjct: 60773 ctggttgacatggagaagag 60754
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>gb|AC098965.2| Homo sapiens chromosome 16 clone RP11-419L9, complete sequence
          Length = 191911

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 189   gaaacacaaagaaagagtgaagaa 212
             |||||||||||||||| |||||||
Sbjct: 65490 gaaacacaaagaaagaatgaagaa 65513
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>gb|AC125783.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBb0039K08, complete sequence
          Length = 122163

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 172   gattggaagaagtccgtgaa 191
             ||||||||||||||||||||
Sbjct: 70869 gattggaagaagtccgtgaa 70850
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 172     gattggaagaagtccgtgaa 191
               ||||||||||||||||||||
Sbjct: 1788513 gattggaagaagtccgtgaa 1788532
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 172      gattggaagaagtccgtgaa 191
                ||||||||||||||||||||
Sbjct: 25758526 gattggaagaagtccgtgaa 25758507



 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 172      gattggaagaagtccgtgaa 191
                ||||||||||||||||||||
Sbjct: 15892769 gattggaagaagtccgtgaa 15892750
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 172      gattggaagaagtccgtgaa 191
                ||||||||||||||||||||
Sbjct: 27225200 gattggaagaagtccgtgaa 27225219
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 172      gattggaagaagtccgtgaa 191
                ||||||||||||||||||||
Sbjct: 19021660 gattggaagaagtccgtgaa 19021641
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 172     gattggaagaagtccgtgaa 191
               ||||||||||||||||||||
Sbjct: 1978304 gattggaagaagtccgtgaa 1978323
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>dbj|AP004730.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0009J19
          Length = 156988

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 172    gattggaagaagtccgtgaa 191
              ||||||||||||||||||||
Sbjct: 114330 gattggaagaagtccgtgaa 114311
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>dbj|AP004328.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OJ1616_B03
          Length = 96081

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 172   gattggaagaagtccgtgaa 191
             ||||||||||||||||||||
Sbjct: 19144 gattggaagaagtccgtgaa 19125
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>dbj|AP006456.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0030A22
          Length = 141096

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 172   gattggaagaagtccgtgaa 191
             ||||||||||||||||||||
Sbjct: 17068 gattggaagaagtccgtgaa 17087
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>dbj|AP006459.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0084D17
          Length = 143931

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 172   gattggaagaagtccgtgaa 191
             ||||||||||||||||||||
Sbjct: 90419 gattggaagaagtccgtgaa 90438
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>gb|AC153535.4| Mus musculus 10 BAC RP23-398N22 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 200061

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 190   aaacacaaagaaagagtgaa 209
             ||||||||||||||||||||
Sbjct: 78179 aaacacaaagaaagagtgaa 78198
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>gb|AC153562.2| Mus musculus 10 BAC RP23-143D12 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 212486

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 106    ggctacgaaagagaaaaaag 125
              ||||||||||||||||||||
Sbjct: 168316 ggctacgaaagagaaaaaag 168297
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>gb|AY829092.1| Illiosentis sp. MGV-2005 28S ribosomal RNA gene, partial sequence
          Length = 2743

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 129  gaagctttgcgactggttga 148
            ||||||||||||||||||||
Sbjct: 1838 gaagctttgcgactggttga 1857
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>gb|AC153560.5| Mus musculus 10 BAC RP23-376E10 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 183485

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 106    ggctacgaaagagaaaaaag 125
              ||||||||||||||||||||
Sbjct: 128136 ggctacgaaagagaaaaaag 128155
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 172      gattggaagaagtccgtgaa 191
                ||||||||||||||||||||
Sbjct: 26077196 gattggaagaagtccgtgaa 26077177



 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 172      gattggaagaagtccgtgaa 191
                ||||||||||||||||||||
Sbjct: 15980145 gattggaagaagtccgtgaa 15980126


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,560,304
Number of Sequences: 3902068
Number of extensions: 3560304
Number of successful extensions: 75771
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 75477
Number of HSP's gapped (non-prelim): 294
length of query: 242
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 220
effective length of database: 17,147,199,772
effective search space: 3772383949840
effective search space used: 3772383949840
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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