ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal39e18
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_549856.1| Oryza sativa (japonica cultivar-group), mRNA 484 e-133
2dbj|AK070363.1| Oryza sativa (japonica cultivar-group) cDNA clon... 484 e-133
3gb|AY107854.1| Zea mays PCO142176 mRNA sequence 404 e-109
4dbj|AK058708.1| Oryza sativa (japonica cultivar-group) cDNA clon... 363 5e-97
5dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 347 3e-92
6dbj|AP002863.3| Oryza sativa (japonica cultivar-group) genomic D... 347 3e-92
7dbj|AP002845.3| Oryza sativa (japonica cultivar-group) genomic D... 347 3e-92
8gb|AC134409.12| Mus musculus chromosome 5, clone RP24-355F10, co... 44 0.59
9gb|AC113099.12| Mus musculus chromosome 8, clone RP23-314N20, co... 42 2.3
10gb|AC140205.2| Mus musculus BAC clone RP24-344F2 from chromosome... 42 2.3
11gb|AC121131.14| Mus musculus chromosome 8, clone RP23-187D7, com... 42 2.3
12gb|AC154279.2| Mus musculus BAC clone RP24-271E12 from chromosom... 40 9.2
13gb|AC140843.2| Mus musculus BAC clone RP24-443L17 from chromosom... 40 9.2
14gb|AC102145.3| Mus musculus chromosome 6, clone RP23-302K3, comp... 40 9.2
15emb|AL138795.21| Human DNA sequence from clone RP4-790G17 on chr... 40 9.2
16gb|AC158922.8| Mus musculus chromosome 15, clone RP23-182C12, co... 40 9.2
17dbj|BA000023.2| Sulfolobus tokodaii str. 7 DNA, complete genome 40 9.2
18gb|AC022878.8| Homo sapiens chromosome 11, clone RP11-413N13, co... 40 9.2
19gb|AC007145.10| Drosophila melanogaster, chromosome 2L, region 3... 40 9.2
20gb|AC156021.2| Mus musculus BAC clone RP23-256A5 from chromosome... 40 9.2
21ref|NM_062162.3| Caenorhabditis elegans Y49F6B.2 (Y49F6B.2) mRNA... 40 9.2
22gb|AC007082.5|AC007082 Drosophila melanogaster, chromosome 2L, r... 40 9.2
23gb|AC006790.2| Caenorhabditis elegans cosmid Y49F6B, complete se... 40 9.2
24gb|AC154849.2| Mus musculus BAC clone RP23-35P8 from chromosome ... 40 9.2
25gb|AC007878.2| Homo sapiens BAC clone RP11-236P2 from 2, complet... 40 9.2
26gb|AC098485.6| Homo sapiens BAC clone CTD-2053I13 from 2, comple... 40 9.2
27dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 9.2
28gb|AC153884.1| Mus musculus 6 BAC RP23-476E22 (Roswell Park Can... 40 9.2
29gb|AC007461.8|AC007461 Homo sapiens chromosome 17, clone 84_E_24... 40 9.2
30gb|AE003662.3| Drosophila melanogaster chromosome 2L, section 71... 40 9.2
31gb|AC004704.2|AC004704 Homo sapiens chromosome 4 clone B341C20 m... 40 9.2
32emb|CT030659.8| Mouse DNA sequence from clone RP23-125F8 on chro... 40 9.2
33gb|AC145927.3| Gallus gallus BAC clone CH261-29M22 from chromoso... 40 9.2
34gb|U00090.1| Rhizobium sp. NGR234 plasmid pNGR234a, complete seq... 40 9.2
35emb|AL626808.28| Mouse DNA sequence from clone RP23-383I7 on chr... 40 9.2

>ref|XM_549856.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2381

 Score =  484 bits (244), Expect = e-133
 Identities = 549/653 (84%)
 Strand = Plus / Plus

                                                                        
Query: 23   gttgaagggttgaaaagtgttctgaannnnnnnaagtcccggattcccgagttcaaagtt 82
            ||||||||||||||||| ||||||||       ||||| |||||||| || |||||||||
Sbjct: 930  gttgaagggttgaaaagcgttctgaatttcttcaagtctcggattcctgaattcaaagtt 989

                                                                        
Query: 83   caagtcataaacgtggaggtgcccgaggaagctgagttagttgcggattcgtcagaagag 142
            ||||| ||||| || || ||| | ||||||||||| |||| | | |||||||||||||| 
Sbjct: 990  caagtaataaatgtagatgtgtctgaggaagctgaattagcttcagattcgtcagaagaa 1049

                                                                        
Query: 143  ttagtgcaagatgatgtgaagagcacgtcagagagttcgttggaagagcctgtcgccgag 202
            ||||||||||||||||||||||||||||||||||  || ||||||||  ||  | | |||
Sbjct: 1050 ttagtgcaagatgatgtgaagagcacgtcagagaactcattggaagattctaccactgag 1109

                                                                        
Query: 203  gaattccaggaggaagatgtttccgacggagattcagactcgaacgacgagagtaagggg 262
            ||  | ||| |||| |||||| | || ||||||||||||||    || || |||||  | 
Sbjct: 1110 gagcttcagcaggatgatgttccagatggagattcagactcagctgaagatagtaaaagt 1169

                                                                        
Query: 263  ccggaagtaaagcttttcatcagcggagtagttcataataaagaggaggctggagcaaaa 322
            || ||| | ||||| ||||| || ||||| |||||||| || ||||| ||||||||||||
Sbjct: 1170 ccagaaatgaagctcttcattagtggagtggttcataacaaggaggatgctggagcaaaa 1229

                                                                        
Query: 323  tcttatgttcgagttcctgctgaaataaataacctggaaagggactcctttgaactgtac 382
            || |||||||||||||| |||||||| |||||  |||||| ||| ||||| ||||| |||
Sbjct: 1230 tcatatgttcgagttccagctgaaatcaataatttggaaaaggattccttcgaactttac 1289

                                                                        
Query: 383  attcctggaaaaggttctgatcgggatctgagtgaaacaaaggccgcgaaacagaaagtt 442
            ||||||||||||||||||||||| ||||||  ||| |||||||| || ||||||||||||
Sbjct: 1290 attcctggaaaaggttctgatcgagatctggctgatacaaaggctgcaaaacagaaagtt 1349

                                                                        
Query: 443  gcggatatggccgctaaattggcgtcagagctcatgccctctgatgttgcaaaggcatta 502
            || |||||||| || |||||||| ||||| || ||||| ||||||||||| |||||||||
Sbjct: 1350 gctgatatggctgccaaattggcatcagaacttatgccttctgatgttgcgaaggcatta 1409

                                                                        
Query: 503  tggggcaccaccaagagttcctccaagataaataaagaagtccaggagcttttgaagctt 562
            ||||| || ||||||||||| || ||||||||||||||||| || ||||| || ||||||
Sbjct: 1410 tggggaacgaccaagagttcttcgaagataaataaagaagtacaagagctcttaaagctt 1469

                                                                        
Query: 563  acactgagcaaggcccgagtcaagctgactgagaataccattttcaatcggattgttacg 622
            || || |||||||| ||||||||||||||||||||||| ||||||||| ||||  |||| 
Sbjct: 1470 accctcagcaaggctcgagtcaagctgactgagaatacaattttcaataggatcattact 1529

                                                                 
Query: 623  gactctaatggctcagatcctttcaatggtctctatgtaggagcatttagtcc 675
            |||  ||| ||||||||||| || | |||||||||||| ||||||||||||||
Sbjct: 1530 gacagtaacggctcagatccatttagtggtctctatgtgggagcatttagtcc 1582



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>dbj|AK070363.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023047F20, full
            insert sequence
          Length = 2381

 Score =  484 bits (244), Expect = e-133
 Identities = 549/653 (84%)
 Strand = Plus / Plus

                                                                        
Query: 23   gttgaagggttgaaaagtgttctgaannnnnnnaagtcccggattcccgagttcaaagtt 82
            ||||||||||||||||| ||||||||       ||||| |||||||| || |||||||||
Sbjct: 930  gttgaagggttgaaaagcgttctgaatttcttcaagtctcggattcctgaattcaaagtt 989

                                                                        
Query: 83   caagtcataaacgtggaggtgcccgaggaagctgagttagttgcggattcgtcagaagag 142
            ||||| ||||| || || ||| | ||||||||||| |||| | | |||||||||||||| 
Sbjct: 990  caagtaataaatgtagatgtgtctgaggaagctgaattagcttcagattcgtcagaagaa 1049

                                                                        
Query: 143  ttagtgcaagatgatgtgaagagcacgtcagagagttcgttggaagagcctgtcgccgag 202
            ||||||||||||||||||||||||||||||||||  || ||||||||  ||  | | |||
Sbjct: 1050 ttagtgcaagatgatgtgaagagcacgtcagagaactcattggaagattctaccactgag 1109

                                                                        
Query: 203  gaattccaggaggaagatgtttccgacggagattcagactcgaacgacgagagtaagggg 262
            ||  | ||| |||| |||||| | || ||||||||||||||    || || |||||  | 
Sbjct: 1110 gagcttcagcaggatgatgttccagatggagattcagactcagctgaagatagtaaaagt 1169

                                                                        
Query: 263  ccggaagtaaagcttttcatcagcggagtagttcataataaagaggaggctggagcaaaa 322
            || ||| | ||||| ||||| || ||||| |||||||| || ||||| ||||||||||||
Sbjct: 1170 ccagaaatgaagctcttcattagtggagtggttcataacaaggaggatgctggagcaaaa 1229

                                                                        
Query: 323  tcttatgttcgagttcctgctgaaataaataacctggaaagggactcctttgaactgtac 382
            || |||||||||||||| |||||||| |||||  |||||| ||| ||||| ||||| |||
Sbjct: 1230 tcatatgttcgagttccagctgaaatcaataatttggaaaaggattccttcgaactttac 1289

                                                                        
Query: 383  attcctggaaaaggttctgatcgggatctgagtgaaacaaaggccgcgaaacagaaagtt 442
            ||||||||||||||||||||||| ||||||  ||| |||||||| || ||||||||||||
Sbjct: 1290 attcctggaaaaggttctgatcgagatctggctgatacaaaggctgcaaaacagaaagtt 1349

                                                                        
Query: 443  gcggatatggccgctaaattggcgtcagagctcatgccctctgatgttgcaaaggcatta 502
            || |||||||| || |||||||| ||||| || ||||| ||||||||||| |||||||||
Sbjct: 1350 gctgatatggctgccaaattggcatcagaacttatgccttctgatgttgcgaaggcatta 1409

                                                                        
Query: 503  tggggcaccaccaagagttcctccaagataaataaagaagtccaggagcttttgaagctt 562
            ||||| || ||||||||||| || ||||||||||||||||| || ||||| || ||||||
Sbjct: 1410 tggggaacgaccaagagttcttcgaagataaataaagaagtacaagagctcttaaagctt 1469

                                                                        
Query: 563  acactgagcaaggcccgagtcaagctgactgagaataccattttcaatcggattgttacg 622
            || || |||||||| ||||||||||||||||||||||| ||||||||| ||||  |||| 
Sbjct: 1470 accctcagcaaggctcgagtcaagctgactgagaatacaattttcaataggatcattact 1529

                                                                 
Query: 623  gactctaatggctcagatcctttcaatggtctctatgtaggagcatttagtcc 675
            |||  ||| ||||||||||| || | |||||||||||| ||||||||||||||
Sbjct: 1530 gacagtaacggctcagatccatttagtggtctctatgtgggagcatttagtcc 1582



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>gb|AY107854.1| Zea mays PCO142176 mRNA sequence
          Length = 1557

 Score =  404 bits (204), Expect = e-109
 Identities = 360/412 (87%)
 Strand = Plus / Plus

                                                                       
Query: 264 cggaagtaaagcttttcatcagcggagtagttcataataaagaggaggctggagcaaaat 323
           ||||||| |||||||| || || ||||| ||||| |||||||| || |||||||||||||
Sbjct: 285 cggaagtgaagctttttattagtggagtggttcacaataaagaagatgctggagcaaaat 344

                                                                       
Query: 324 cttatgttcgagttcctgctgaaataaataacctggaaagggactcctttgaactgtaca 383
           | |||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||||
Sbjct: 345 catatgttcgagttccagctgaaataaataacatggaaaaggactcctttgaactgtaca 404

                                                                       
Query: 384 ttcctggaaaaggttctgatcgggatctgagtgaaacaaaggccgcgaaacagaaagttg 443
           |||||||| ||||||||||||| ||| ||  |||||||||||| || |||||||||||||
Sbjct: 405 ttcctggagaaggttctgatcgtgatttggctgaaacaaaggctgcaaaacagaaagttg 464

                                                                       
Query: 444 cggatatggccgctaaattggcgtcagagctcatgccctctgatgttgcaaaggcattat 503
           | |||||||| |||||||| || |||||||| ||||| ||||||||||| ||||||||||
Sbjct: 465 cagatatggctgctaaattagcctcagagcttatgccgtctgatgttgccaaggcattat 524

                                                                       
Query: 504 ggggcaccaccaagagttcctccaagataaataaagaagtccaggagcttttgaagctta 563
           |||| ||  |||||||||| || ||||||||||||||||| ||||||||||| | |||||
Sbjct: 525 ggggtacagccaagagttcttcaaagataaataaagaagttcaggagcttttaaggctta 584

                                                                       
Query: 564 cactgagcaaggcccgagtcaagctgactgagaataccattttcaatcggattgttacgg 623
           |  | ||||||||||||||||||||||| || ||||||||||| || || ||  ||| ||
Sbjct: 585 cgttaagcaaggcccgagtcaagctgaccgaaaataccatttttaaacgaatcattatgg 644

                                                               
Query: 624 actctaatggctcagatcctttcaatggtctctatgtaggagcatttagtcc 675
           || ||||  || ||||||| || |||||||||||||| ||||||||||||||
Sbjct: 645 acactaacagcacagatccatttaatggtctctatgtgggagcatttagtcc 696



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 139/171 (81%), Gaps = 3/171 (1%)
 Strand = Plus / Plus

                                                                       
Query: 56  aagtcccggattcccgagttcaaagttcaagtcataaacgtggaggtgcccgaggaagct 115
           ||||| |||||||| || ||||||||||| || ||||| || || ||| | |||||| ||
Sbjct: 80  aagtctcggattcctgaattcaaagttcaggtgataaatgttgatgtggctgaggaaact 139

                                                                       
Query: 116 gagttagttgcggattcgtcagaagagttagtgcaagatgatgtgaagagcacgtcagag 175
           || |||| |||  ||||||| ||||| |||||||||||||||||||| || ||  |||| 
Sbjct: 140 gaattagctgcaaattcgtctgaagaattagtgcaagatgatgtgaaaagtactccagaa 199

                                                              
Query: 176 agttcgttggaagagcctgtcgccgaggaattc---caggaggaagatgtt 223
           || || ||||||||||| | | | |||||| ||   |||||||||||||||
Sbjct: 200 agctcattggaagagccagccactgaggaactcgagcaggaggaagatgtt 250



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>dbj|AK058708.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-D03, full
           insert sequence
          Length = 1178

 Score =  363 bits (183), Expect = 5e-97
 Identities = 324/371 (87%)
 Strand = Plus / Plus

                                                                       
Query: 305 gaggaggctggagcaaaatcttatgttcgagttcctgctgaaataaataacctggaaagg 364
           ||||| |||||||||||||| |||||||||||||| |||||||| |||||  |||||| |
Sbjct: 12  gaggatgctggagcaaaatcatatgttcgagttccagctgaaatcaataatttggaaaag 71

                                                                       
Query: 365 gactcctttgaactgtacattcctggaaaaggttctgatcgggatctgagtgaaacaaag 424
           || ||||| ||||| |||||||||||||||||||||||||| ||||||  ||| ||||||
Sbjct: 72  gattccttcgaactttacattcctggaaaaggttctgatcgagatctggctgatacaaag 131

                                                                       
Query: 425 gccgcgaaacagaaagttgcggatatggccgctaaattggcgtcagagctcatgccctct 484
           || || |||||||||||||| |||||||| || |||||||| ||||| || ||||| |||
Sbjct: 132 gctgcaaaacagaaagttgctgatatggctgccaaattggcatcagaacttatgccttct 191

                                                                       
Query: 485 gatgttgcaaaggcattatggggcaccaccaagagttcctccaagataaataaagaagtc 544
           |||||||| |||||||||||||| || ||||||||||| || ||||||||||||||||| 
Sbjct: 192 gatgttgcgaaggcattatggggaacgaccaagagttcttcgaagataaataaagaagta 251

                                                                       
Query: 545 caggagcttttgaagcttacactgagcaaggcccgagtcaagctgactgagaataccatt 604
           || ||||| || |||||||| || |||||||| ||||||||||||||||||||||| |||
Sbjct: 252 caagagctcttaaagcttaccctcagcaaggctcgagtcaagctgactgagaatacaatt 311

                                                                       
Query: 605 ttcaatcggattgttacggactctaatggctcagatcctttcaatggtctctatgtagga 664
           |||||| ||||  |||| |||  ||| ||||||||||| || | |||||||||||| |||
Sbjct: 312 ttcaataggatcattactgacagtaacggctcagatccatttagtggtctctatgtggga 371

                      
Query: 665 gcatttagtcc 675
           |||||||||||
Sbjct: 372 gcatttagtcc 382



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              complete sequence
          Length = 43261740

 Score =  347 bits (175), Expect = 3e-92
 Identities = 417/500 (83%)
 Strand = Plus / Minus

                                                                          
Query: 23     gttgaagggttgaaaagtgttctgaannnnnnnaagtcccggattcccgagttcaaagtt 82
              ||||||||||||||||| ||||||||       ||||| |||||||| || |||||||||
Sbjct: 418073 gttgaagggttgaaaagcgttctgaatttcttcaagtctcggattcctgaattcaaagtt 418014

                                                                          
Query: 83     caagtcataaacgtggaggtgcccgaggaagctgagttagttgcggattcgtcagaagag 142
              ||||| ||||| || || ||| | ||||||||||| |||| | | |||||||||||||| 
Sbjct: 418013 caagtaataaatgtagatgtgtctgaggaagctgaattagcttcagattcgtcagaagaa 417954

                                                                          
Query: 143    ttagtgcaagatgatgtgaagagcacgtcagagagttcgttggaagagcctgtcgccgag 202
              ||||||||||||||||||||||||||||||||||  || ||||||||  ||  | | |||
Sbjct: 417953 ttagtgcaagatgatgtgaagagcacgtcagagaactcattggaagattctaccactgag 417894

                                                                          
Query: 203    gaattccaggaggaagatgtttccgacggagattcagactcgaacgacgagagtaagggg 262
              ||  | ||| |||| |||||| | || ||||||||||||||    || || |||||  | 
Sbjct: 417893 gagcttcagcaggatgatgttccagatggagattcagactcagctgaagatagtaaaagt 417834

                                                                          
Query: 263    ccggaagtaaagcttttcatcagcggagtagttcataataaagaggaggctggagcaaaa 322
              || ||| | ||||| ||||| || ||||| |||||||| || ||||| ||||||||||||
Sbjct: 417833 ccagaaatgaagctcttcattagtggagtggttcataacaaggaggatgctggagcaaaa 417774

                                                                          
Query: 323    tcttatgttcgagttcctgctgaaataaataacctggaaagggactcctttgaactgtac 382
              || |||||||||||||| |||||||| |||||  |||||| ||| ||||| ||||| |||
Sbjct: 417773 tcatatgttcgagttccagctgaaatcaataatttggaaaaggattccttcgaactttac 417714

                                                                          
Query: 383    attcctggaaaaggttctgatcgggatctgagtgaaacaaaggccgcgaaacagaaagtt 442
              ||||||||||||||||||||||| ||||||  ||| |||||||| || ||||||||||||
Sbjct: 417713 attcctggaaaaggttctgatcgagatctggctgatacaaaggctgcaaaacagaaagtt 417654

                                                                          
Query: 443    gcggatatggccgctaaattggcgtcagagctcatgccctctgatgttgcaaaggcatta 502
              || |||||||| || |||||||| ||||| || ||||| ||||||||||| |||||||||
Sbjct: 417653 gctgatatggctgccaaattggcatcagaacttatgccttctgatgttgcgaaggcatta 417594

                                  
Query: 503    tggggcaccaccaagagttc 522
              ||||| || |||||||||||
Sbjct: 417593 tggggaacgaccaagagttc 417574



 Score =  109 bits (55), Expect = 1e-20
 Identities = 100/115 (86%)
 Strand = Plus / Minus

                                                                          
Query: 528    agataaataaagaagtccaggagcttttgaagcttacactgagcaaggcccgagtcaagc 587
              |||||||||||||||| || ||||| || |||||||| || |||||||| ||||||||||
Sbjct: 417269 agataaataaagaagtacaagagctcttaaagcttaccctcagcaaggctcgagtcaagc 417210

                                                                     
Query: 588    tgactgagaataccattttcaatcggattgttacggactctaatggctcagatcc 642
              ||||||||||||| ||||||||| ||||  |||| |||  ||| |||||||||||
Sbjct: 417209 tgactgagaatacaattttcaataggatcattactgacagtaacggctcagatcc 417155



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 650    ggtctctatgtaggagcatttagtcc 675
              ||||||||||| ||||||||||||||
Sbjct: 417072 ggtctctatgtgggagcatttagtcc 417047



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>dbj|AP002863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0005A05
          Length = 190834

 Score =  347 bits (175), Expect = 3e-92
 Identities = 417/500 (83%)
 Strand = Plus / Minus

                                                                          
Query: 23     gttgaagggttgaaaagtgttctgaannnnnnnaagtcccggattcccgagttcaaagtt 82
              ||||||||||||||||| ||||||||       ||||| |||||||| || |||||||||
Sbjct: 169911 gttgaagggttgaaaagcgttctgaatttcttcaagtctcggattcctgaattcaaagtt 169852

                                                                          
Query: 83     caagtcataaacgtggaggtgcccgaggaagctgagttagttgcggattcgtcagaagag 142
              ||||| ||||| || || ||| | ||||||||||| |||| | | |||||||||||||| 
Sbjct: 169851 caagtaataaatgtagatgtgtctgaggaagctgaattagcttcagattcgtcagaagaa 169792

                                                                          
Query: 143    ttagtgcaagatgatgtgaagagcacgtcagagagttcgttggaagagcctgtcgccgag 202
              ||||||||||||||||||||||||||||||||||  || ||||||||  ||  | | |||
Sbjct: 169791 ttagtgcaagatgatgtgaagagcacgtcagagaactcattggaagattctaccactgag 169732

                                                                          
Query: 203    gaattccaggaggaagatgtttccgacggagattcagactcgaacgacgagagtaagggg 262
              ||  | ||| |||| |||||| | || ||||||||||||||    || || |||||  | 
Sbjct: 169731 gagcttcagcaggatgatgttccagatggagattcagactcagctgaagatagtaaaagt 169672

                                                                          
Query: 263    ccggaagtaaagcttttcatcagcggagtagttcataataaagaggaggctggagcaaaa 322
              || ||| | ||||| ||||| || ||||| |||||||| || ||||| ||||||||||||
Sbjct: 169671 ccagaaatgaagctcttcattagtggagtggttcataacaaggaggatgctggagcaaaa 169612

                                                                          
Query: 323    tcttatgttcgagttcctgctgaaataaataacctggaaagggactcctttgaactgtac 382
              || |||||||||||||| |||||||| |||||  |||||| ||| ||||| ||||| |||
Sbjct: 169611 tcatatgttcgagttccagctgaaatcaataatttggaaaaggattccttcgaactttac 169552

                                                                          
Query: 383    attcctggaaaaggttctgatcgggatctgagtgaaacaaaggccgcgaaacagaaagtt 442
              ||||||||||||||||||||||| ||||||  ||| |||||||| || ||||||||||||
Sbjct: 169551 attcctggaaaaggttctgatcgagatctggctgatacaaaggctgcaaaacagaaagtt 169492

                                                                          
Query: 443    gcggatatggccgctaaattggcgtcagagctcatgccctctgatgttgcaaaggcatta 502
              || |||||||| || |||||||| ||||| || ||||| ||||||||||| |||||||||
Sbjct: 169491 gctgatatggctgccaaattggcatcagaacttatgccttctgatgttgcgaaggcatta 169432

                                  
Query: 503    tggggcaccaccaagagttc 522
              ||||| || |||||||||||
Sbjct: 169431 tggggaacgaccaagagttc 169412



 Score =  109 bits (55), Expect = 1e-20
 Identities = 100/115 (86%)
 Strand = Plus / Minus

                                                                          
Query: 528    agataaataaagaagtccaggagcttttgaagcttacactgagcaaggcccgagtcaagc 587
              |||||||||||||||| || ||||| || |||||||| || |||||||| ||||||||||
Sbjct: 169107 agataaataaagaagtacaagagctcttaaagcttaccctcagcaaggctcgagtcaagc 169048

                                                                     
Query: 588    tgactgagaataccattttcaatcggattgttacggactctaatggctcagatcc 642
              ||||||||||||| ||||||||| ||||  |||| |||  ||| |||||||||||
Sbjct: 169047 tgactgagaatacaattttcaataggatcattactgacagtaacggctcagatcc 168993



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 650    ggtctctatgtaggagcatttagtcc 675
              ||||||||||| ||||||||||||||
Sbjct: 168910 ggtctctatgtgggagcatttagtcc 168885



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>dbj|AP002845.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0482C06
          Length = 182779

 Score =  347 bits (175), Expect = 3e-92
 Identities = 417/500 (83%)
 Strand = Plus / Minus

                                                                         
Query: 23    gttgaagggttgaaaagtgttctgaannnnnnnaagtcccggattcccgagttcaaagtt 82
             ||||||||||||||||| ||||||||       ||||| |||||||| || |||||||||
Sbjct: 58274 gttgaagggttgaaaagcgttctgaatttcttcaagtctcggattcctgaattcaaagtt 58215

                                                                         
Query: 83    caagtcataaacgtggaggtgcccgaggaagctgagttagttgcggattcgtcagaagag 142
             ||||| ||||| || || ||| | ||||||||||| |||| | | |||||||||||||| 
Sbjct: 58214 caagtaataaatgtagatgtgtctgaggaagctgaattagcttcagattcgtcagaagaa 58155

                                                                         
Query: 143   ttagtgcaagatgatgtgaagagcacgtcagagagttcgttggaagagcctgtcgccgag 202
             ||||||||||||||||||||||||||||||||||  || ||||||||  ||  | | |||
Sbjct: 58154 ttagtgcaagatgatgtgaagagcacgtcagagaactcattggaagattctaccactgag 58095

                                                                         
Query: 203   gaattccaggaggaagatgtttccgacggagattcagactcgaacgacgagagtaagggg 262
             ||  | ||| |||| |||||| | || ||||||||||||||    || || |||||  | 
Sbjct: 58094 gagcttcagcaggatgatgttccagatggagattcagactcagctgaagatagtaaaagt 58035

                                                                         
Query: 263   ccggaagtaaagcttttcatcagcggagtagttcataataaagaggaggctggagcaaaa 322
             || ||| | ||||| ||||| || ||||| |||||||| || ||||| ||||||||||||
Sbjct: 58034 ccagaaatgaagctcttcattagtggagtggttcataacaaggaggatgctggagcaaaa 57975

                                                                         
Query: 323   tcttatgttcgagttcctgctgaaataaataacctggaaagggactcctttgaactgtac 382
             || |||||||||||||| |||||||| |||||  |||||| ||| ||||| ||||| |||
Sbjct: 57974 tcatatgttcgagttccagctgaaatcaataatttggaaaaggattccttcgaactttac 57915

                                                                         
Query: 383   attcctggaaaaggttctgatcgggatctgagtgaaacaaaggccgcgaaacagaaagtt 442
             ||||||||||||||||||||||| ||||||  ||| |||||||| || ||||||||||||
Sbjct: 57914 attcctggaaaaggttctgatcgagatctggctgatacaaaggctgcaaaacagaaagtt 57855

                                                                         
Query: 443   gcggatatggccgctaaattggcgtcagagctcatgccctctgatgttgcaaaggcatta 502
             || |||||||| || |||||||| ||||| || ||||| ||||||||||| |||||||||
Sbjct: 57854 gctgatatggctgccaaattggcatcagaacttatgccttctgatgttgcgaaggcatta 57795

                                 
Query: 503   tggggcaccaccaagagttc 522
             ||||| || |||||||||||
Sbjct: 57794 tggggaacgaccaagagttc 57775



 Score =  109 bits (55), Expect = 1e-20
 Identities = 100/115 (86%)
 Strand = Plus / Minus

                                                                         
Query: 528   agataaataaagaagtccaggagcttttgaagcttacactgagcaaggcccgagtcaagc 587
             |||||||||||||||| || ||||| || |||||||| || |||||||| ||||||||||
Sbjct: 57470 agataaataaagaagtacaagagctcttaaagcttaccctcagcaaggctcgagtcaagc 57411

                                                                    
Query: 588   tgactgagaataccattttcaatcggattgttacggactctaatggctcagatcc 642
             ||||||||||||| ||||||||| ||||  |||| |||  ||| |||||||||||
Sbjct: 57410 tgactgagaatacaattttcaataggatcattactgacagtaacggctcagatcc 57356



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 650   ggtctctatgtaggagcatttagtcc 675
             ||||||||||| ||||||||||||||
Sbjct: 57273 ggtctctatgtgggagcatttagtcc 57248



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>gb|AC134409.12| Mus musculus chromosome 5, clone RP24-355F10, complete sequence
          Length = 141528

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 200   gaggaattccaggaggaagatg 221
             ||||||||||||||||||||||
Sbjct: 93720 gaggaattccaggaggaagatg 93741



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>gb|AC113099.12| Mus musculus chromosome 8, clone RP23-314N20, complete sequence
          Length = 199694

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 524    tccaagataaataaagaagtc 544
              |||||||||||||||||||||
Sbjct: 155462 tccaagataaataaagaagtc 155482



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 524   tccaagataaataaagaagtc 544
             |||||||||||||||||||||
Sbjct: 23779 tccaagataaataaagaagtc 23759



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>gb|AC140205.2| Mus musculus BAC clone RP24-344F2 from chromosome 8, complete sequence
          Length = 140215

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 524    tccaagataaataaagaagtc 544
              |||||||||||||||||||||
Sbjct: 101829 tccaagataaataaagaagtc 101849



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>gb|AC121131.14| Mus musculus chromosome 8, clone RP23-187D7, complete sequence
          Length = 188634

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 524   tccaagataaataaagaagtc 544
             |||||||||||||||||||||
Sbjct: 35989 tccaagataaataaagaagtc 35969



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 524 tccaagataaataaagaagtc 544
           |||||||||||||||||||||
Sbjct: 214 tccaagataaataaagaagtc 234



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>gb|AC154279.2| Mus musculus BAC clone RP24-271E12 from chromosome 17, complete sequence
          Length = 173729

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 628    taatggctcagatcctttca 647
              ||||||||||||||||||||
Sbjct: 138518 taatggctcagatcctttca 138537



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>gb|AC140843.2| Mus musculus BAC clone RP24-443L17 from chromosome 14, complete
             sequence
          Length = 124918

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 313   tggagcaaaatcttatgttc 332
             ||||||||||||||||||||
Sbjct: 95612 tggagcaaaatcttatgttc 95593



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>gb|AC102145.3| Mus musculus chromosome 6, clone RP23-302K3, complete sequence
          Length = 199882

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 476   atgccctctgatgttgcaaaggca 499
             ||||||||||||||| ||||||||
Sbjct: 36109 atgccctctgatgtttcaaaggca 36086



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>emb|AL138795.21| Human DNA sequence from clone RP4-790G17 on chromosome 1q21.1-21.3
             Contains the ANP32E gene for acidic (leucine-rich) nuclear
             phosphoprotein 32 family, member E, the CA14 gene for
             carbonic anhydrase XIV, the gene for a likely ortholog of
             C. elegans anterior pharynx defective 1A (APH-1A), the
             gene for a novel protein (FLJ23221), a novel gene and the
             MRPS21 gene for mitochondrial ribosomal protein S21,
             complete sequence
          Length = 132823

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 531   taaataaagaagtccaggag 550
             ||||||||||||||||||||
Sbjct: 72710 taaataaagaagtccaggag 72691



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>gb|AC158922.8| Mus musculus chromosome 15, clone RP23-182C12, complete sequence
          Length = 201723

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 531   taaataaagaagtccaggag 550
             ||||||||||||||||||||
Sbjct: 64855 taaataaagaagtccaggag 64874



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>dbj|BA000023.2| Sulfolobus tokodaii str. 7 DNA, complete genome
          Length = 2694756

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 484     tgatgttgcaaaggcattat 503
               ||||||||||||||||||||
Sbjct: 1211504 tgatgttgcaaaggcattat 1211523



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>gb|AC022878.8| Homo sapiens chromosome 11, clone RP11-413N13, complete sequence
          Length = 179652

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 467   tcagagctcatgccctctga 486
             ||||||||||||||||||||
Sbjct: 99266 tcagagctcatgccctctga 99285



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>gb|AC007145.10| Drosophila melanogaster, chromosome 2L, region 37D, BAC clone BACR10I09,
              complete sequence
          Length = 169289

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 554    ttgaagcttacactgagcaa 573
              ||||||||||||||||||||
Sbjct: 155060 ttgaagcttacactgagcaa 155079



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>gb|AC156021.2| Mus musculus BAC clone RP23-256A5 from chromosome 5, complete sequence
          Length = 217987

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 313   tggagcaaaatcttatgttc 332
             ||||||||||||||||||||
Sbjct: 56287 tggagcaaaatcttatgttc 56268



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>ref|NM_062162.3| Caenorhabditis elegans Y49F6B.2 (Y49F6B.2) mRNA, complete cds
          Length = 816

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 189 agcctgtcgccgaggaattc 208
           ||||||||||||||||||||
Sbjct: 119 agcctgtcgccgaggaattc 138



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>gb|AC007082.5|AC007082 Drosophila melanogaster, chromosome 2L, region 37D, BAC clone
             BACR28G24, complete sequence
          Length = 171375

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 554   ttgaagcttacactgagcaa 573
             ||||||||||||||||||||
Sbjct: 18669 ttgaagcttacactgagcaa 18688



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>gb|AC006790.2| Caenorhabditis elegans cosmid Y49F6B, complete sequence
          Length = 52139

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 189   agcctgtcgccgaggaattc 208
             ||||||||||||||||||||
Sbjct: 37375 agcctgtcgccgaggaattc 37394



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>gb|AC154849.2| Mus musculus BAC clone RP23-35P8 from chromosome 13, complete sequence
          Length = 200650

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 313    tggagcaaaatcttatgttc 332
              ||||||||||||||||||||
Sbjct: 118386 tggagcaaaatcttatgttc 118367



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>gb|AC007878.2| Homo sapiens BAC clone RP11-236P2 from 2, complete sequence
          Length = 185134

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 343    tgaaataaataacctggaaa 362
              ||||||||||||||||||||
Sbjct: 137173 tgaaataaataacctggaaa 137154



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>gb|AC098485.6| Homo sapiens BAC clone CTD-2053I13 from 2, complete sequence
          Length = 88404

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 316   agcaaaatcttatgttcgag 335
             ||||||||||||||||||||
Sbjct: 31267 agcaaaatcttatgttcgag 31248



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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 184     ggaagagcctgtcgccgagg 203
               ||||||||||||||||||||
Sbjct: 6931044 ggaagagcctgtcgccgagg 6931063



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>gb|AC153884.1| Mus musculus  6 BAC RP23-476E22 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 195597

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 476    atgccctctgatgttgcaaaggca 499
              ||||||||||||||| ||||||||
Sbjct: 184792 atgccctctgatgtttcaaaggca 184769



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>gb|AC007461.8|AC007461 Homo sapiens chromosome 17, clone 84_E_24, complete sequence
          Length = 180385

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 340    tgctgaaataaataacctgg 359
              ||||||||||||||||||||
Sbjct: 134183 tgctgaaataaataacctgg 134202



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>gb|AE003662.3| Drosophila melanogaster chromosome 2L, section 71 of 83 of the complete
              sequence
          Length = 266205

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 554    ttgaagcttacactgagcaa 573
              ||||||||||||||||||||
Sbjct: 150241 ttgaagcttacactgagcaa 150260



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>gb|AC004704.2|AC004704 Homo sapiens chromosome 4 clone B341C20 map 4q25, complete sequence
          Length = 134187

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 288    gagtagttcataataaagag 307
              ||||||||||||||||||||
Sbjct: 112371 gagtagttcataataaagag 112390



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>emb|CT030659.8| Mouse DNA sequence from clone RP23-125F8 on chromosome 9, complete
             sequence
          Length = 199662

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 313   tggagcaaaatcttatgttc 332
             ||||||||||||||||||||
Sbjct: 70374 tggagcaaaatcttatgttc 70393



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>gb|AC145927.3| Gallus gallus BAC clone CH261-29M22 from chromosome unknown, complete
              sequence
          Length = 227692

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 542    gtccaggagcttttgaagct 561
              ||||||||||||||||||||
Sbjct: 206825 gtccaggagcttttgaagct 206806



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>gb|U00090.1| Rhizobium sp. NGR234 plasmid pNGR234a, complete sequence
          Length = 536165

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 387    ctggaaaaggttctgatcgg 406
              ||||||||||||||||||||
Sbjct: 353030 ctggaaaaggttctgatcgg 353011



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>emb|AL626808.28| Mouse DNA sequence from clone RP23-383I7 on chromosome 4, complete
             sequence
          Length = 203992

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 313   tggagcaaaatcttatgttc 332
             ||||||||||||||||||||
Sbjct: 55915 tggagcaaaatcttatgttc 55934


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,549,040
Number of Sequences: 3902068
Number of extensions: 5549040
Number of successful extensions: 99606
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 99478
Number of HSP's gapped (non-prelim): 123
length of query: 675
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 652
effective length of database: 17,143,297,704
effective search space: 11177430103008
effective search space used: 11177430103008
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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