| Clone Name | baal38o15 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY571339.1| Psephurus gladius mitochondrion, complete genome Length = 16483 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 166 tactacaaggcctcgacctca 186 ||||||||||||||||||||| Sbjct: 4422 tactacaaggcctcgacctca 4442
>gb|AY510085.1| Acipenser dabryanus mitochondrion, complete genome Length = 16438 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 166 tactacaaggcctcgacctca 186 ||||||||||||||||||||| Sbjct: 4422 tactacaaggcctcgacctca 4442
>gb|AY442351.1| Huso huso mitochondrion, complete genome Length = 16760 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 166 tactacaaggcctcgacctca 186 ||||||||||||||||||||| Sbjct: 4474 tactacaaggcctcgacctca 4494
>dbj|AP006356.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT06I08, TM0082b, complete sequence Length = 93398 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 ctttgccaacaatagtttctc 340 ||||||||||||||||||||| Sbjct: 91698 ctttgccaacaatagtttctc 91678
>ref|NM_115647.1| Arabidopsis thaliana unknown protein AT3G57850 mRNA, complete cds Length = 273 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 tttggggaggaactcgctat 58 |||||||||||||||||||| Sbjct: 118 tttggggaggaactcgctat 137
>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome Length = 3730232 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 367 acatcacttcactggaaatg 386 |||||||||||||||||||| Sbjct: 1206493 acatcacttcactggaaatg 1206512
>gb|AY661656.1| Sorghum bicolor clone BAC 88M4, complete sequence Length = 279448 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 gctgcttgtcgtcatggctc 111 |||||||||||||||||||| Sbjct: 51120 gctgcttgtcgtcatggctc 51139
>ref|XM_808059.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053508723.50) partial mRNA Length = 1752 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 ttggaaacctgaagctgctt 98 |||||||||||||||||||| Sbjct: 161 ttggaaacctgaagctgctt 142
>gb|AC003085.2| Homo sapiens BAC clone CTB-94H21 from 7, complete sequence Length = 124836 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 384 atgttggatttatctggcaa 403 |||||||||||||||||||| Sbjct: 21920 atgttggatttatctggcaa 21939
>gb|AC142286.1| Pan troglodytes BAC clone RP43-169G24 from 7, complete sequence Length = 194546 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 384 atgttggatttatctggcaa 403 |||||||||||||||||||| Sbjct: 116947 atgttggatttatctggcaa 116928
>gb|AC051649.21| Homo sapiens chromosome 11, clone RP11-534I22, complete sequence Length = 188519 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 ggagggtgagctgcctgcag 219 |||||||||||||||||||| Sbjct: 24162 ggagggtgagctgcctgcag 24143
>gb|AC123789.6| Homo sapiens chromosome 11, clone RP5-998N23, complete sequence Length = 137691 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 ggagggtgagctgcctgcag 219 |||||||||||||||||||| Sbjct: 108652 ggagggtgagctgcctgcag 108633
>emb|BX294155.1| Pirellula sp. strain 1 complete genome; segment 23/24 Length = 306550 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 catcgttcaaggatctgtac 245 |||||||||||||||||||| Sbjct: 169263 catcgttcaaggatctgtac 169282
>emb|AL132977.1|ATT10K17 Arabidopsis thaliana DNA chromosome 3, BAC clone T10K17 Length = 109016 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 tttggggaggaactcgctat 58 |||||||||||||||||||| Sbjct: 19715 tttggggaggaactcgctat 19734
>emb|AJ585409.1| Brachypelma angustum mitochondrial nd1 gene (partial), 16S rRNA gene (partial) and tRNA-Leu gene Length = 928 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 445 agaatctattgttccttgat 464 |||||||||||||||||||| Sbjct: 843 agaatctattgttccttgat 824
>gb|AF087017.1| Homo sapiens H19 gene, complete sequence Length = 40558 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 ggagggtgagctgcctgcag 219 |||||||||||||||||||| Sbjct: 32327 ggagggtgagctgcctgcag 32308
>dbj|AK128774.1| Homo sapiens cDNA FLJ45387 fis, clone BRHIP3024703 Length = 4783 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 ggagggtgagctgcctgcag 219 |||||||||||||||||||| Sbjct: 194 ggagggtgagctgcctgcag 213
>gb|AC004556.1|AC004556 Homo sapiens Chromosome 11p15.5 PAC pDJ998n23 containing H19 gene, complete sequence Length = 100316 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 ggagggtgagctgcctgcag 219 |||||||||||||||||||| Sbjct: 29034 ggagggtgagctgcctgcag 29053
>gb|AC144631.3| Mus musculus BAC clone RP23-112C14 from 3, complete sequence Length = 179548 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 ccttcattggaaacctgaag 92 |||||||||||||||||||| Sbjct: 82103 ccttcattggaaacctgaag 82122 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,624,455 Number of Sequences: 3902068 Number of extensions: 3624455 Number of successful extensions: 62894 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 19 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 62850 Number of HSP's gapped (non-prelim): 44 length of query: 538 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 515 effective length of database: 17,143,297,704 effective search space: 8828798317560 effective search space used: 8828798317560 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)