ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal39d15 |
|---|---|
| Clone Library Name | barley_pub |
>SC24A_ARATH (Q9SFU0) Protein transport protein Sec24-like At3g07100| Length = 1038 Score = 317 bits (813), Expect = 2e-86 Identities = 148/216 (68%), Positives = 176/216 (81%) Frame = +2 Query: 14 VVHPLAEAPDGEEVPVVNFGSAGVIRCRRCRTYINPYATFADAGRKWRCNLCTLLNDVPG 193 VV PLAE P+GEEVP+++FGS G+IRCRRCRTY+NP+ TF D+GRKWRCN+C++LNDVPG Sbjct: 345 VVCPLAETPEGEEVPLIDFGSTGIIRCRRCRTYVNPFVTFTDSGRKWRCNICSMLNDVPG 404 Query: 194 EYFCGLDASGRRFDTDQRPELSKGTVEFVAPTEYMVRPPMPPSYFFLIDVSVSAVRSGLL 373 EYF LDA+GRR D DQRPEL+KG+VE +APTEYMVRPPMPP YFFLIDVS+SA +SG+L Sbjct: 405 EYFSHLDATGRRMDMDQRPELTKGSVEIIAPTEYMVRPPMPPIYFFLIDVSISATKSGML 464 Query: 374 EVVAKTIKSCLDDLLGFPRTQIGFLTFDSTLHFHNFKSSLSQPQMMXXXXXXXXXXXXXX 553 EVVA+TIKSCLD+L G+PRTQIGF+T+DSTLHF+N KSSLSQPQMM Sbjct: 465 EVVAQTIKSCLDNLPGYPRTQIGFITYDSTLHFYNMKSSLSQPQMMVVSDLDDIFVPLPD 524 Query: 554 XXXXXXXXSRHVIESFLDNLPNMFQDNVNVESALGP 661 SR V+++FLD+LP MFQDN NVESA GP Sbjct: 525 DLLVNLSESRTVVDAFLDSLPLMFQDNFNVESAFGP 560
>SC24B_ARATH (Q9M081) Putative protein transport protein Sec24-like At4g32640| Length = 1069 Score = 192 bits (489), Expect = 6e-49 Identities = 98/216 (45%), Positives = 127/216 (58%), Gaps = 1/216 (0%) Frame = +2 Query: 14 VVHPLAEA-PDGEEVPVVNFGSAGVIRCRRCRTYINPYATFADAGRKWRCNLCTLLNDVP 190 +V PLA + P E + VV+FG G +RC RC+ YINP+ F D GRK+ CN C ++ P Sbjct: 403 MVQPLALSHPSEEPIQVVDFGEGGPVRCSRCKGYINPFMKFIDQGRKFICNFCGYTDETP 462 Query: 191 GEYFCGLDASGRRFDTDQRPELSKGTVEFVAPTEYMVRPPMPPSYFFLIDVSVSAVRSGL 370 +Y C L GRR D D+RPEL +GTVEFVA EYMVR PMP YFFLIDVS++A+++G Sbjct: 463 RDYHCNLGPDGRRRDVDERPELCRGTVEFVATKEYMVRDPMPAVYFFLIDVSMNAIQTGA 522 Query: 371 LEVVAKTIKSCLDDLLGFPRTQIGFLTFDSTLHFHNFKSSLSQPQMMXXXXXXXXXXXXX 550 I+ L DL PRT +G TFDST+HF+N K +L QP M+ Sbjct: 523 TAAACNAIQQVLSDLPEGPRTFVGIATFDSTIHFYNLKRALQQPLMLIVPDVQDVYTPLE 582 Query: 551 XXXXXXXXXSRHVIESFLDNLPNMFQDNVNVESALG 658 R +E LD++P MFQ++ ESA G Sbjct: 583 TDVVVQLSECRQHLELLLDSIPTMFQESKIPESAFG 618
>SC24C_ARATH (Q9M291) Protein transport protein Sec24-like CEF| Length = 1097 Score = 192 bits (488), Expect = 7e-49 Identities = 95/216 (43%), Positives = 130/216 (60%), Gaps = 1/216 (0%) Frame = +2 Query: 14 VVHPLAEA-PDGEEVPVVNFGSAGVIRCRRCRTYINPYATFADAGRKWRCNLCTLLNDVP 190 +V P+A + P E + VV+FG +G +RC RC+ Y+NP+ F D GRK+ CNLC ++ P Sbjct: 407 IVQPMALSHPSEEPIQVVDFGESGPVRCSRCKGYVNPFMKFIDQGRKFICNLCGYTDETP 466 Query: 191 GEYFCGLDASGRRFDTDQRPELSKGTVEFVAPTEYMVRPPMPPSYFFLIDVSVSAVRSGL 370 +Y C L GRR D D+RPEL +GTV+FVA EYMVR PMP YFFLIDVS++A+++G Sbjct: 467 RDYQCNLGPDGRRRDADERPELCRGTVDFVATKEYMVRDPMPAVYFFLIDVSMNAIQTGA 526 Query: 371 LEVVAKTIKSCLDDLLGFPRTQIGFLTFDSTLHFHNFKSSLSQPQMMXXXXXXXXXXXXX 550 I+ L DL PRT +G TFDST+HF+N K +L QP M+ Sbjct: 527 TAAACSAIQQVLSDLPEGPRTFVGIATFDSTIHFYNLKRALQQPLMLIVPDVQDVYTPLE 586 Query: 551 XXXXXXXXXSRHVIESFLDNLPNMFQDNVNVESALG 658 R +E L+++P MFQ++ + ESA G Sbjct: 587 TDVIVQLSECRQHLEILLESIPTMFQESKSPESAFG 622
>SC24A_HUMAN (O95486) Protein transport protein Sec24A (SEC24-related protein A)| (Fragment) Length = 1078 Score = 171 bits (432), Expect = 2e-42 Identities = 90/216 (41%), Positives = 129/216 (59%) Frame = +2 Query: 14 VVHPLAEAPDGEEVPVVNFGSAGVIRCRRCRTYINPYATFADAGRKWRCNLCTLLNDVPG 193 ++HP D ++PVV S+ ++RCR CRTYINP+ +F D R+W+CNLC +NDVP Sbjct: 395 LLHPFK---DLVQLPVVT--SSTIVRCRSCRTYINPFVSFLDQ-RRWKCNLCYRVNDVPE 448 Query: 194 EYFCGLDASGRRFDTDQRPELSKGTVEFVAPTEYMVRPPMPPSYFFLIDVSVSAVRSGLL 373 E+ + + +RPE+ T+EF+AP+EYM+RPP PP Y F+ DVS +AV +G L Sbjct: 449 EFLYN-PLTRVYGEPHRRPEVQNATIEFMAPSEYMLRPPQPPVYLFVFDVSHNAVETGYL 507 Query: 374 EVVAKTIKSCLDDLLGFPRTQIGFLTFDSTLHFHNFKSSLSQPQMMXXXXXXXXXXXXXX 553 V +++ LD L G RT+IGF+TFDST+HF+ + SLSQPQM+ Sbjct: 508 NSVCQSLLDNLDLLPGNTRTKIGFITFDSTIHFYGLQESLSQPQMLIVSDIEDVFIPMPE 567 Query: 554 XXXXXXXXSRHVIESFLDNLPNMFQDNVNVESALGP 661 S+ +++ L LP MF + +SALGP Sbjct: 568 NLLVNLNESKELVQDLLKTLPQMFTKTLETQSALGP 603
>SC24A_MOUSE (Q3U2P1) Protein transport protein Sec24A (SEC24-related protein A)| Length = 1090 Score = 169 bits (427), Expect = 9e-42 Identities = 88/216 (40%), Positives = 128/216 (59%) Frame = +2 Query: 14 VVHPLAEAPDGEEVPVVNFGSAGVIRCRRCRTYINPYATFADAGRKWRCNLCTLLNDVPG 193 ++HP D ++PVV S+ ++RCR CRTYINP+ F D R+W+CNLC +NDVP Sbjct: 407 LLHPFK---DLVQLPVVT--SSTIVRCRSCRTYINPFVNFLDQ-RRWKCNLCYRVNDVPE 460 Query: 194 EYFCGLDASGRRFDTDQRPELSKGTVEFVAPTEYMVRPPMPPSYFFLIDVSVSAVRSGLL 373 E+ + + +RPE+ T+EF+AP+EYM+RPP PP Y F+ DVS +A+ +G L Sbjct: 461 EFMYN-PLTRVYGEPHKRPEVQNATIEFMAPSEYMLRPPQPPVYLFVFDVSHNAIETGYL 519 Query: 374 EVVAKTIKSCLDDLLGFPRTQIGFLTFDSTLHFHNFKSSLSQPQMMXXXXXXXXXXXXXX 553 V +++ LD L G RT+IGF+TFDST+HF++ + LSQPQM+ Sbjct: 520 NSVCQSLLDNLDLLPGNTRTKIGFITFDSTIHFYSLQEGLSQPQMLIVSDIDDVFIPMPE 579 Query: 554 XXXXXXXXSRHVIESFLDNLPNMFQDNVNVESALGP 661 S+ +++ L LP MF + +SALGP Sbjct: 580 NLLVNLNESKELVQDLLKTLPQMFTKTLETQSALGP 615
>SC24B_HUMAN (O95487) Protein transport protein Sec24B (SEC24-related protein B)| Length = 1268 Score = 169 bits (427), Expect = 9e-42 Identities = 88/216 (40%), Positives = 129/216 (59%) Frame = +2 Query: 14 VVHPLAEAPDGEEVPVVNFGSAGVIRCRRCRTYINPYATFADAGRKWRCNLCTLLNDVPG 193 ++HP D ++PV+ S ++RCR CRTYINP+ +F D R+W+CNLC +NDVP Sbjct: 584 LLHPFR---DLTQLPVIT--SNTIVRCRSCRTYINPFVSFIDQ-RRWKCNLCYRVNDVPE 637 Query: 194 EYFCGLDASGRRFDTDQRPELSKGTVEFVAPTEYMVRPPMPPSYFFLIDVSVSAVRSGLL 373 E+ + + +RPE+ TVEF+A ++YM+RPP P Y F++DVS +AV +G L Sbjct: 638 EFMYN-PLTRSYGEPHKRPEVQNSTVEFIASSDYMLRPPQPAVYLFVLDVSHNAVEAGYL 696 Query: 374 EVVAKTIKSCLDDLLGFPRTQIGFLTFDSTLHFHNFKSSLSQPQMMXXXXXXXXXXXXXX 553 ++ +++ LD L G RT+IGF+TFDST+HF+N + LSQPQM+ Sbjct: 697 TILCQSLLENLDKLPGDSRTRIGFMTFDSTIHFYNLQEGLSQPQMLIVSDIDDVFLPTPD 756 Query: 554 XXXXXXXXSRHVIESFLDNLPNMFQDNVNVESALGP 661 S+ +I+ L+ LPNMF + SALGP Sbjct: 757 SLLVNLYESKELIKDLLNALPNMFTNTRETHSALGP 792
>SC24C_HUMAN (P53992) Protein transport protein Sec24C (SEC24-related protein C)| Length = 1094 Score = 167 bits (424), Expect = 2e-41 Identities = 91/227 (40%), Positives = 131/227 (57%), Gaps = 11/227 (4%) Frame = +2 Query: 14 VVHPLAEAPDGEEVP-VVNFGSAGVIRCRRCRTYINPYATFADAGRKWRCNLCTLLNDVP 190 V+ PLA P E P VV+ G +G +RC RC+ Y+ P+ F + GR+++C C+ +NDVP Sbjct: 398 VIKPLARLPPEEASPYVVDHGESGPLRCNRCKAYMCPFMQFIEGGRRFQCCFCSCINDVP 457 Query: 191 GEYFCGLDASGRRFDTDQRPELSKGTVEFVAPTEYMV--RPPMPPSYFFLIDVSVSAVRS 364 +YF LD +G+R D RPELS G+ EF+A +Y + P PP++ F+IDVS +A+R+ Sbjct: 458 PQYFQHLDHTGKRVDAYDRPELSLGSYEFLATVDYCKNNKFPSPPAFIFMIDVSYNAIRT 517 Query: 365 GLLEVVAKTIKSCLDDLLGFPR--------TQIGFLTFDSTLHFHNFKSSLSQPQMMXXX 520 GL+ ++ + +KS LD L PR ++GF+T++ LHF+N KSSL+QPQMM Sbjct: 518 GLVRLLCEELKSLLDFL---PREGGAEESAIRVGFVTYNKVLHFYNVKSSLAQPQMMVVS 574 Query: 521 XXXXXXXXXXXXXXXXXXXSRHVIESFLDNLPNMFQDNVNVESALGP 661 SR VI S LD +P MF D E+ P Sbjct: 575 DVADMFVPLLDGFLVNVNESRAVITSLLDQIPEMFADTRETETVFVP 621
>SC24D_HUMAN (O94855) Protein transport protein Sec24D (SEC24-related protein D)| Length = 1032 Score = 156 bits (395), Expect = 5e-38 Identities = 80/218 (36%), Positives = 127/218 (58%), Gaps = 11/218 (5%) Frame = +2 Query: 14 VVHPLAEAPDGEE-VPVVNFGSAGVIRCRRCRTYINPYATFADAGRKWRCNLCTLLNDVP 190 V+ P A P E + +VN G +G +RC RC+ Y+ P+ F + GR+++C C +NDVP Sbjct: 336 VIKPFATIPSNESPLYLVNHGESGPVRCNRCKAYMCPFMQFIEGGRRYQCGFCNCVNDVP 395 Query: 191 GEYFCGLDASGRRFDTDQRPELSKGTVEFVAPTEY--MVRPPMPPSYFFLIDVSVSAVRS 364 YF LD GRR D ++PELS G+ E+VA +Y +PP PP++ F+IDVS S +++ Sbjct: 396 PFYFQHLDHIGRRLDHYEKPELSLGSYEYVATLDYCRKSKPPNPPAFIFMIDVSYSNIKN 455 Query: 365 GLLEVVAKTIKSCLDDLLGFPRTQ--------IGFLTFDSTLHFHNFKSSLSQPQMMXXX 520 GL++++ + +K+ L+ + P+ + +GF+T++ LHF N KS+L+QPQMM Sbjct: 456 GLVKLICEELKTMLEKI---PKEEQEETSAIRVGFITYNKVLHFFNVKSNLAQPQMMVVT 512 Query: 521 XXXXXXXXXXXXXXXXXXXSRHVIESFLDNLPNMFQDN 634 S+ VI + LD +P+MF D+ Sbjct: 513 DVGEVFVPLLDGFLVNYQESQSVIHNLLDQIPDMFADS 550
>SEC24_YEAST (P40482) Protein transport protein Sec24 (Abnormal nuclear| morphology 1) Length = 926 Score = 129 bits (324), Expect = 8e-30 Identities = 80/229 (34%), Positives = 113/229 (49%), Gaps = 13/229 (5%) Frame = +2 Query: 14 VVHPLAEAPDGEEVPVVNFGSAGVIRCRRCRTYINPYATFADAGRKWRCNLCTLLNDVPG 193 V+ P D + P +N ++RCRRCR+Y+NP+ TF + GR+WRCN C L NDVP Sbjct: 206 VIRPYQHLYDDIDPPPLNEDGL-IVRCRRCRSYMNPFVTFIEQGRRWRCNFCRLANDVPM 264 Query: 194 EYFCGLDASG-----RRFDTDQRPELSKGTVEFVAPTEYMVRPPMPPSYFFLIDVSVSAV 358 + +D S R+D R E+ +E++AP EY +R P P +Y FLIDVS S++ Sbjct: 265 Q----MDQSDPNDPKSRYD---RNEIKCAVMEYMAPKEYTLRQPPPATYCFLIDVSQSSI 317 Query: 359 RSGLLEVVAKTIKSCLDDLLGF-PRTQIGFLTFDSTLHF-------HNFKSSLSQPQMMX 514 +SGLL T+ LD + RT+I L D+ +H+ N + S Q MM Sbjct: 318 KSGLLATTINTLLQNLDSIPNHDERTRISILCVDNAIHYFKIPLDSENNEESADQINMMD 377 Query: 515 XXXXXXXXXXXXXXXXXXXXXSRHVIESFLDNLPNMFQDNVNVESALGP 661 R IE+ L +P +FQ N+ ALGP Sbjct: 378 IADLEEPFLPRPNSMVVSLKACRQNIETLLTKIPQIFQSNLITNFALGP 426
>YIY8_SCHPO (Q9UUI5) Hypothetical protein C22F8.08 in chromosome I| Length = 926 Score = 122 bits (306), Expect = 9e-28 Identities = 71/208 (34%), Positives = 105/208 (50%), Gaps = 1/208 (0%) Frame = +2 Query: 41 DGEEVPVVNFGSAGVIRCRRCRTYINPYATFADAGRKWRCNLCTLLNDVPGEYFCGLDAS 220 + + VPVV + RCRRCR YINP++ F D G ++RCN C ++N+VP Y + Sbjct: 241 EDDPVPVVT--DTIISRCRRCRMYINPFSIFIDNGHRYRCNSCGIVNEVPQSYDWDSFRN 298 Query: 221 GRRFDTDQRPELSKGTVEFVAPTEYMVRPPMPPSYFFLIDVSVSAVRSGLLEVVAKTIKS 400 +R D QRPEL+ V+F+AP EYMVR P P Y FLID+S ++ SG++ ++ I Sbjct: 299 VQR-DRWQRPELNYAVVDFIAPQEYMVRAPQPLVYVFLIDISFVSISSGMVGTASRAILE 357 Query: 401 CLDDLLGFP-RTQIGFLTFDSTLHFHNFKSSLSQPQMMXXXXXXXXXXXXXXXXXXXXXX 577 LD + R ++ F+ DS LHF + + + Sbjct: 358 SLDRIPNKEGRAKVAFIGVDSALHFFSVSPGAEEATQLVVSDLEEPFLPRNQDLLLNLRE 417 Query: 578 SRHVIESFLDNLPNMFQDNVNVESALGP 661 R IE+ L+ +MF + +ALGP Sbjct: 418 CRQGIENLLERFQSMFATTRDSSNALGP 445
>YNB3_SCHPO (Q9USS7) Hypothetical protein C4.03c in chromosome II| Length = 891 Score = 121 bits (303), Expect = 2e-27 Identities = 75/219 (34%), Positives = 109/219 (49%), Gaps = 4/219 (1%) Frame = +2 Query: 14 VVHPLAEA-PDGEEVPVVNFGSAGVIRCRRCRTYINPYATFADAGRKWRCNLCTLLNDVP 190 +V P AE PD VPVV+ ++ RC++CR YINP+ F A KW CNLC N Sbjct: 189 IVQPFAELRPDEAPVPVVDNTNSNPPRCKKCRGYINPFIQFTMASSKWTCNLCGSENSFN 248 Query: 191 GEYFCGLDASGRRFDTDQRPELSKGTVEFVAPTEYMVR--PPMPPSYFFLIDVSVSAVRS 364 + F L S + + RPEL+ GT++F +Y ++ PP P + F+IDVS A Sbjct: 249 DDGFNPLVGS-QHDGVESRPELNVGTIDFKVGKDYWIKEDPPKPARFVFMIDVSYEASSK 307 Query: 365 GLLEVVAKTIKSCLDDLLGF-PRTQIGFLTFDSTLHFHNFKSSLSQPQMMXXXXXXXXXX 541 GL +V A+ I++ L + P +I + FD +++F N +L QP M+ Sbjct: 308 GLPKVAAEAIRNILYGPVPLDPNVKIAIVCFDRSVNFFNLSPNLEQPHMLAASDLENPFV 367 Query: 542 XXXXXXXXXXXXSRHVIESFLDNLPNMFQDNVNVESALG 658 S+ VIE LD+ P +FQD E +G Sbjct: 368 PFSSGLFVDPIASKVVIERLLDSFPAIFQDVKIPEPVVG 406
>SFB2_YEAST (P53953) SED5-binding protein 2 (SEC24-related protein 2)| Length = 876 Score = 114 bits (284), Expect = 3e-25 Identities = 61/155 (39%), Positives = 91/155 (58%), Gaps = 2/155 (1%) Frame = +2 Query: 14 VVHPLAEAPDGE-EVPVVNFGSAGVIRCRRCRTYINPYATFADAGRKWRCNLCTLLNDVP 190 V+ P D + +VP+ G ++RCRRCR+Y+NP+ F + GRKW+CN+C NDVP Sbjct: 139 VIRPYLHLQDSDNQVPLNTDGV--IVRCRRCRSYMNPFVVFINQGRKWQCNICRFKNDVP 196 Query: 191 GEYFCGLDASGRRFDTDQRPELSKGTVEFVAPTEYMVRPPMPPSYFFLIDVSVSAVRSGL 370 + L G + +R E+ V+++AP EY VR P P Y FL+DVS +AV++GL Sbjct: 197 FGFDQNL--QGAPINRYERNEIKNSVVDYLAPVEYSVREPPPSVYVFLLDVSQNAVKNGL 254 Query: 371 LEVVAKTIKSCLDDLLGFP-RTQIGFLTFDSTLHF 472 L A+TI ++ L RT+I + D +LH+ Sbjct: 255 LATSARTILENIEFLPNHDGRTRIAIICVDHSLHY 289
>SFB3_YEAST (P38810) SED5-binding protein 3 (SEC24-related protein 3) (Lethal| with SEC13 protein 1) Length = 929 Score = 97.4 bits (241), Expect = 3e-20 Identities = 54/161 (33%), Positives = 86/161 (53%), Gaps = 5/161 (3%) Frame = +2 Query: 38 PDGEEVPVVNFGSAGV-IRCRRCRTYINPYATFADAGRKWRCNLCTLLNDVPGEYFCGLD 214 P+ EVP + G +RCRRCR Y NP F CN+C + VPGE+F + Sbjct: 201 PNDAEVPTIPLPMDGTPLRCRRCRAYANPKFQFT-YDSSVICNICRVKMQVPGEHFAPMG 259 Query: 215 ASGRRFDTDQRPELSKGTVEFVAPTEY---MVRPPMPPSYFFLIDVSVSAVRSGLLEVVA 385 +G+R D +++ EL GTV+F+ P+ Y + +P Y FLIDVS+ A +G + Sbjct: 260 PNGQRSDLNEKSELLHGTVDFLVPSIYNAIQEKELLPLHYVFLIDVSLLANENGSSLAMV 319 Query: 386 KTIKSCLDDLLGF-PRTQIGFLTFDSTLHFHNFKSSLSQPQ 505 + ++SC++ + F P ++ + +D+ L F N + L Q Sbjct: 320 EGVRSCIEYISDFQPNCEVAIIVYDNKLRFFNLRPDLDNAQ 360
>SEC23_YEAST (P15303) Protein transport protein SEC23| Length = 768 Score = 48.1 bits (113), Expect = 2e-05 Identities = 31/130 (23%), Positives = 52/130 (40%), Gaps = 1/130 (0%) Frame = +2 Query: 101 CRTYINPYATFADAGRKWRCNLCTLLNDVPGEYFCGLDASGRRFDTDQRP-ELSKGTVEF 277 C++ +NPY W C +C N +P +Y + P EL T+E+ Sbjct: 61 CKSILNPYCVIDPRNSSWSCPICNSRNHLPPQY--------TNLSQENMPLELQSTTIEY 112 Query: 278 VAPTEYMVRPPMPPSYFFLIDVSVSAVRSGLLEVVAKTIKSCLDDLLGFPRTQIGFLTFD 457 + V PP +FF++D++ L+ T S L P IG +T+ Sbjct: 113 ITNKPVTV----PPIFFFVVDLTSETENLDSLKESIITSLSLLP-----PNALIGLITYG 163 Query: 458 STLHFHNFKS 487 + + H+ S Sbjct: 164 NVVQLHDLSS 173
>SC23A_MOUSE (Q01405) Protein transport protein Sec23A (SEC23-related protein A)| Length = 765 Score = 38.5 bits (88), Expect = 0.018 Identities = 36/153 (23%), Positives = 65/153 (42%), Gaps = 2/153 (1%) Frame = +2 Query: 23 PLAEAPDGEEVPVVNFGSAGVIRCRR--CRTYINPYATFADAGRKWRCNLCTLLNDVPGE 196 PL E PD +P + + + C R CR +NP + W CN C N P Sbjct: 44 PLKERPD---LPPIQYEP---VLCSRTTCRAVLNPLCQVDYRAKLWACNFCYQRNQFPPT 97 Query: 197 YFCGLDASGRRFDTDQRPELSKGTVEFVAPTEYMVRPPMPPSYFFLIDVSVSAVRSGLLE 376 Y G+ + + P+ S ++E+V + P MP + +++D + + L+ Sbjct: 98 Y-AGISELNQ--PAELLPQFS--SIEYVV----LRGPQMPLIFLYVVD---TCIEDEDLQ 145 Query: 377 VVAKTIKSCLDDLLGFPRTQIGFLTFDSTLHFH 475 + ++++ L L P +G +TF + H Sbjct: 146 ALKESMQMSLSLLP--PTALVGLITFGRMVQVH 176
>SC23A_HUMAN (Q15436) Protein transport protein Sec23A (SEC23-related protein A)| Length = 765 Score = 38.1 bits (87), Expect = 0.023 Identities = 36/153 (23%), Positives = 65/153 (42%), Gaps = 2/153 (1%) Frame = +2 Query: 23 PLAEAPDGEEVPVVNFGSAGVIRCRR--CRTYINPYATFADAGRKWRCNLCTLLNDVPGE 196 PL E PD +P + + + C R CR +NP + W CN C N P Sbjct: 44 PLKERPD---LPPIQYEP---VLCSRTTCRAVLNPLCQVDYRAKLWACNFCYQRNQFPPS 97 Query: 197 YFCGLDASGRRFDTDQRPELSKGTVEFVAPTEYMVRPPMPPSYFFLIDVSVSAVRSGLLE 376 Y G+ + + P+ S ++E+V + P MP + +++D + + L+ Sbjct: 98 Y-AGISELNQ--PAELLPQFS--SIEYVV----LRGPQMPLIFLYVVD---TCMEDEDLQ 145 Query: 377 VVAKTIKSCLDDLLGFPRTQIGFLTFDSTLHFH 475 + ++++ L L P +G +TF + H Sbjct: 146 ALKESMQMSLSLLP--PTALVGLITFGRMVQVH 176
>SC23B_MOUSE (Q9D662) Protein transport protein Sec23B (SEC23-related protein B)| Length = 767 Score = 33.9 bits (76), Expect = 0.44 Identities = 37/153 (24%), Positives = 61/153 (39%), Gaps = 2/153 (1%) Frame = +2 Query: 23 PLAEAPDGEEVPVVNFGSAGVIRCRR--CRTYINPYATFADAGRKWRCNLCTLLNDVPGE 196 PL E PD +P V + + C R C+ +NP + W CN C N P Sbjct: 44 PLKERPD---LPPVQYEP---VLCSRPTCKAILNPLCQVDYRAKLWACNFCFQRNQFPPA 97 Query: 197 YFCGLDASGRRFDTDQRPELSKGTVEFVAPTEYMVRPPMPPSYFFLIDVSVSAVRSGLLE 376 Y G+ + +Q EL + + EYM++ FL V + + L+ Sbjct: 98 Y-AGIS------EVNQPAEL----MPQFSTIEYMIQRGARSPLIFLYVVD-TCLEEDDLQ 145 Query: 377 VVAKTIKSCLDDLLGFPRTQIGFLTFDSTLHFH 475 + ++++ L L P +G +TF + H Sbjct: 146 ALKESLQMSLSLLP--PDALVGLITFGRMVQVH 176
>SC23B_HUMAN (Q15437) Protein transport protein Sec23B (SEC23-related protein B)| Length = 767 Score = 33.5 bits (75), Expect = 0.58 Identities = 36/155 (23%), Positives = 61/155 (39%), Gaps = 4/155 (2%) Frame = +2 Query: 23 PLAEAPDGEEVPVVNFGSAGVIRCRR--CRTYINPYATFADAGRKWRCNLCTLLNDVPGE 196 PL E PD +P V + + C R C+ +NP + W CN C N P Sbjct: 44 PLKERPD---LPPVQYEP---VLCSRPTCKAVLNPLCQVDYRAKLWACNFCFQRNQFPPA 97 Query: 197 YFCGLDASGRRFDTDQRPELSK--GTVEFVAPTEYMVRPPMPPSYFFLIDVSVSAVRSGL 370 Y G + +Q EL T+E+V P + +++D + + Sbjct: 98 Y-------GGISEVNQPAELMPQFSTIEYVIQR----GAQSPLIFLYVVD---TCLEEDD 143 Query: 371 LEVVAKTIKSCLDDLLGFPRTQIGFLTFDSTLHFH 475 L+ + ++++ L L P +G +TF + H Sbjct: 144 LQALKESLQMSLSLLP--PDALVGLITFGRMVQVH 176
>PNP_HAEIN (P44584) Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)| (Polynucleotide phosphorylase) (PNPase) Length = 709 Score = 31.6 bits (70), Expect = 2.2 Identities = 16/49 (32%), Positives = 27/49 (55%) Frame = -1 Query: 628 LKHIGQVIEERLDNMSRIDQINQEIVRQWQENIVQVGNHHHLRLTQRRL 482 L HI Q+ EER++ +S Q+ QE+ +V++ +RLT + L Sbjct: 647 LVHISQIAEERVEKVSDYLQVGQEV----NVKVVEIDRQGRIRLTMKDL 691
>SYGB_PSESM (Q88B35) Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)| (Glycine--tRNA ligase beta chain) (GlyRS) Length = 684 Score = 31.2 bits (69), Expect = 2.9 Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 3/49 (6%) Frame = +2 Query: 194 EYFCGLDASGR---RFDTDQRPELSKGTVEFVAPTEYMVRPPMPPSYFF 331 +YFC LDA G+ RF T E SK + +A E +VRP + + FF Sbjct: 281 KYFCLLDADGKLLPRFITVANIE-SKDPAQIIAGNEKVVRPRLTDAEFF 328
>Y45A_METJA (P81308) Hypothetical protein MJ0458.1| Length = 57 Score = 30.4 bits (67), Expect = 4.9 Identities = 12/33 (36%), Positives = 16/33 (48%) Frame = +2 Query: 26 LAEAPDGEEVPVVNFGSAGVIRCRRCRTYINPY 124 +A + P N G ++RC RCR NPY Sbjct: 15 IAPREKSTKFPCPNCGEVEIVRCERCRKLNNPY 47
>PROML_DROME (P82295) Prominin-like protein| Length = 1013 Score = 30.0 bits (66), Expect = 6.4 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = +2 Query: 92 CRRCRTYINPYATFADAGRKWRCNLCTLL 178 CRRCR P + DA R++ C +C L+ Sbjct: 193 CRRCRQGCPPCTSKQDAQRRFCCGICLLI 221
>SYGB_PSEAE (Q9I7B8) Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)| (Glycine--tRNA ligase beta chain) (GlyRS) Length = 684 Score = 30.0 bits (66), Expect = 6.4 Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 3/49 (6%) Frame = +2 Query: 194 EYFCGLDASGR---RFDTDQRPELSKGTVEFVAPTEYMVRPPMPPSYFF 331 +YFC LDA+G+ RF T E SK V+ E +VRP + + FF Sbjct: 281 KYFCLLDANGKLLPRFITVANVE-SKAPENIVSGNEKVVRPRLTDAEFF 328
>Y1672_HAEIN (P44288) Protein HI1672| Length = 881 Score = 30.0 bits (66), Expect = 6.4 Identities = 15/50 (30%), Positives = 24/50 (48%) Frame = +2 Query: 197 YFCGLDASGRRFDTDQRPELSKGTVEFVAPTEYMVRPPMPPSYFFLIDVS 346 Y L G F+T +L KG + F P E ++P P+ FL+ ++ Sbjct: 817 YDFSLGWKGAVFNTGSVQQLLKGGISFSTPAEKEIQPQAQPNKRFLLQIN 866
>MA2B1_HUMAN (O00754) Lysosomal alpha-mannosidase precursor (EC 3.2.1.24)| (Mannosidase, alpha B) (Lysosomal acid alpha-mannosidase) (Laman) (Mannosidase alpha class 2B member 1) [Contains: Lysosomal alpha-mannosidase A peptide; Lysosomal alpha-mannosidase Length = 1010 Score = 30.0 bits (66), Expect = 6.4 Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 2/67 (2%) Frame = +2 Query: 299 VRPPMPPSYFFLIDVSVSAVRSGLLEVVAKTIKSCLD-DLLGFPRTQIGFL-TFDSTLHF 472 +RPP+PP FFL+ ++ + R+G E + L+ LL +G+L T D +F Sbjct: 27 LRPPLPPLCFFLLLLAAAGARAGGYETCPTVQPNMLNVHLLPHTHDDVGWLKTVDQ--YF 84 Query: 473 HNFKSSL 493 + K+ + Sbjct: 85 YGIKNDI 91
>PRGC1_PIG (Q865B6) Peroxisome proliferator-activated receptor gamma| coactivator 1-alpha (PPAR gamma coactivator 1-alpha) (PPARGC-1-alpha) (PGC-1-alpha) Length = 796 Score = 29.6 bits (65), Expect = 8.3 Identities = 15/42 (35%), Positives = 21/42 (50%) Frame = -2 Query: 465 NVLSKVKNPICVRGKPRRSSRHDLMVFATTSSSPLRTADTET 340 N S IC + KP+R +L+ + TT+ P T TET Sbjct: 185 NSWSNKAKSICQQQKPQRRPCSELLKYLTTNDDPPHTKPTET 226
>GUAA_THET8 (Q5SI28) GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)| (Glutamine amidotransferase) (GMP synthetase) Length = 503 Score = 29.6 bits (65), Expect = 8.3 Identities = 11/31 (35%), Positives = 21/31 (67%) Frame = -1 Query: 634 IVLKHIGQVIEERLDNMSRIDQINQEIVRQW 542 + ++ +G+V EERL+ + R D I ++R+W Sbjct: 386 LAVRVLGEVTEERLEILRRADDIFTSLLREW 416
>GUAA_THET2 (Q72IE5) GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)| (Glutamine amidotransferase) (GMP synthetase) Length = 503 Score = 29.6 bits (65), Expect = 8.3 Identities = 11/31 (35%), Positives = 21/31 (67%) Frame = -1 Query: 634 IVLKHIGQVIEERLDNMSRIDQINQEIVRQW 542 + ++ +G+V EERL+ + R D I ++R+W Sbjct: 386 LAVRVLGEVTEERLEILRRADDIFTSLLREW 416 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 96,015,130 Number of Sequences: 219361 Number of extensions: 1981923 Number of successful extensions: 5495 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 5241 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5452 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6314008338 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
