ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal39d10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase ... 372 e-103
2RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase ... 341 9e-94
3RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase a... 338 1e-92
4RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase a... 326 3e-89
5RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase a... 324 1e-88
6RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase ... 323 2e-88
7RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase ... 323 3e-88
8RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase ... 320 2e-87
9RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase a... 319 5e-87
10RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase ... 315 9e-86
11RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase a... 311 1e-84
12RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase a... 311 1e-84
13RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase a... 310 3e-84
14RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase a... 301 8e-82
15RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase a... 273 2e-73
16RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase a... 236 4e-62
17RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase a... 196 6e-50
18RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase a... 191 2e-48
19RCA_POPEU (P84562) Ribulose bisphosphate carboxylase/oxygenase a... 47 4e-05
20SYL_PSESM (Q87VX3) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine-... 32 1.1
21EF1A2_XENLA (P17507) Elongation factor 1-alpha, oocyte form (EF-... 31 3.3
22LEPA_HELPY (O25122) GTP-binding protein lepA 30 4.3
23YNEI_ECOLI (P76149) Aldehyde dehydrogenase-like protein yneI (EC... 30 4.3
24GP116_HUMAN (Q8IZF2) Probable G-protein coupled receptor 116 pre... 30 5.7
25PNPT1_MOUSE (Q8K1R3) Polyribonucleotide nucleotidyltransferase 1... 30 5.7
26LRC24_MOUSE (Q8BHA1) Leucine-rich repeat-containing protein 24 p... 30 7.4
27PNPT1_PONPY (Q5RCW2) Polyribonucleotide nucleotidyltransferase 1... 30 7.4
28PNPT1_HUMAN (Q8TCS8) Polyribonucleotide nucleotidyltransferase 1... 30 7.4
29EF1A_ONCVO (P27592) Elongation factor 1-alpha (EF-1-alpha) 29 9.7
30RPOA_ANAMM (Q5PA81) DNA-directed RNA polymerase alpha chain (EC ... 29 9.7
31LEPA_LEIXX (Q6AEB5) GTP-binding protein lepA 29 9.7
32PTRA_SALTY (Q8ZMB5) Protease 3 precursor (EC 3.4.24.55) (Proteas... 29 9.7
33PTRA_SALTI (Q8Z418) Protease 3 precursor (EC 3.4.24.55) (Proteas... 29 9.7
34RL3_CLOPE (Q8XHS3) 50S ribosomal protein L3 29 9.7 
>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,|
           chloroplast precursor (RuBisCO activase A) (RA A)
          Length = 464

 Score =  372 bits (955), Expect = e-103
 Identities = 182/184 (98%), Positives = 183/184 (99%)
 Frame = +1

Query: 1   VMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRI 180
           +MNIADAPTNVQLPGMYNK ENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRI
Sbjct: 244 LMNIADAPTNVQLPGMYNKRENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRI 303

Query: 181 GVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRL 360
           GVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRL
Sbjct: 304 GVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRL 363

Query: 361 VNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTG 540
           VNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTG
Sbjct: 364 VNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTG 423

Query: 541 SFYG 552
           SFYG
Sbjct: 424 SFYG 427
to top
>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,|
           chloroplast precursor (RuBisCO activase B) (RA B)
          Length = 425

 Score =  341 bits (875), Expect = 9e-94
 Identities = 160/184 (86%), Positives = 176/184 (95%)
 Frame = +1

Query: 1   VMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRI 180
           +MNIADAPTNVQLPGMYNKEENPRVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRI
Sbjct: 241 LMNIADAPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRI 300

Query: 181 GVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRL 360
           GVCKGIF+TDNV DE+VV++VDTFPGQSIDFFGALRARVYDDEVRKWVG  G+ENI KRL
Sbjct: 301 GVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGEIGVENISKRL 360

Query: 361 VNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTG 540
           VNSR+GP TF+QPKMT+EKL+EYGHMLVQEQ+NVKRVQLAD Y+S+AALG AN DAMKTG
Sbjct: 361 VNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSEAALGQANDDAMKTG 420

Query: 541 SFYG 552
           +FYG
Sbjct: 421 AFYG 424
to top
>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 432

 Score =  338 bits (866), Expect = 1e-92
 Identities = 158/184 (85%), Positives = 175/184 (95%)
 Frame = +1

Query: 1   VMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRI 180
           +MNIAD PTNVQLPGMYNKE+NPRVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPTRDDR+
Sbjct: 244 LMNIADNPTNVQLPGMYNKEDNPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRV 303

Query: 181 GVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRL 360
           GVCKGIF+TDNV DE +VKIVD+FPGQSIDFFGALRARVYDDEVRKWV  TG+ENIGKRL
Sbjct: 304 GVCKGIFRTDNVPDEDIVKIVDSFPGQSIDFFGALRARVYDDEVRKWVSDTGVENIGKRL 363

Query: 361 VNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTG 540
           VNSR+GP  FEQPKMT+EKL+EYG+MLV+EQ+NVKRVQLA+ Y+S+AALGDAN DAMKTG
Sbjct: 364 VNSREGPPEFEQPKMTIEKLIEYGYMLVKEQENVKRVQLAEQYLSEAALGDANSDAMKTG 423

Query: 541 SFYG 552
           SFYG
Sbjct: 424 SFYG 427
to top
>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 437

 Score =  326 bits (836), Expect = 3e-89
 Identities = 152/184 (82%), Positives = 173/184 (94%)
 Frame = +1

Query: 1   VMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRI 180
           +MNIAD PTNVQLPGMYNKEENPRVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRI
Sbjct: 254 LMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRI 313

Query: 181 GVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRL 360
           GVC GIF++DNV+ E +VK+VDTFPGQSIDFFGALRARVYDDEVRKW+   G+++IGK+L
Sbjct: 314 GVCIGIFRSDNVAKEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWITGVGVDSIGKKL 373

Query: 361 VNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTG 540
           VNS++GP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLAD Y+S+AALGDAN DAM TG
Sbjct: 374 VNSKEGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLSEAALGDANSDAMNTG 433

Query: 541 SFYG 552
           +FYG
Sbjct: 434 TFYG 437
to top
>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 433

 Score =  324 bits (831), Expect = 1e-88
 Identities = 150/183 (81%), Positives = 173/183 (94%)
 Frame = +1

Query: 1   VMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRI 180
           +MNIAD PTNVQLPGMYNKE+NPRVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRI
Sbjct: 250 LMNIADNPTNVQLPGMYNKEDNPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRI 309

Query: 181 GVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRL 360
           GVCKGIF+TD V +E VV++VDTFPGQSIDFFGALRARVYDDEVR+WV  TG+ENI ++L
Sbjct: 310 GVCKGIFRTDGVDEEHVVQLVDTFPGQSIDFFGALRARVYDDEVRRWVSETGVENIARKL 369

Query: 361 VNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTG 540
           VNS++GP TFEQPK+T+EKLLEYGHMLV EQ+NVKRVQLAD Y+++AALG+AN+DAMKTG
Sbjct: 370 VNSKEGPPTFEQPKITIEKLLEYGHMLVAEQENVKRVQLADKYLNEAALGEANEDAMKTG 429

Query: 541 SFY 549
           SF+
Sbjct: 430 SFF 432
to top
>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
           (RubisCO activase alpha form)
          Length = 476

 Score =  323 bits (828), Expect = 2e-88
 Identities = 151/184 (82%), Positives = 171/184 (92%)
 Frame = +1

Query: 1   VMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRI 180
           +MNIAD PTNVQLPGMYNKEENPRVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRI
Sbjct: 254 LMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRI 313

Query: 181 GVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRL 360
           GVCKGIF+TDNV+D+ +VK+VDTFPGQSIDFFGALRARVY DEVRKWV   G++ IGK+L
Sbjct: 314 GVCKGIFRTDNVADDDIVKLVDTFPGQSIDFFGALRARVYHDEVRKWVSEVGVDTIGKKL 373

Query: 361 VNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTG 540
           VNS++GP +FEQPKMT++KLL YG MLVQEQ+NVKRVQLAD YMS+AALGDAN DA+K G
Sbjct: 374 VNSKEGPPSFEQPKMTIDKLLGYGGMLVQEQENVKRVQLADKYMSEAALGDANNDAIKRG 433

Query: 541 SFYG 552
           +FYG
Sbjct: 434 TFYG 437
to top
>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
           (RubisCO activase beta form)
          Length = 435

 Score =  323 bits (827), Expect = 3e-88
 Identities = 150/182 (82%), Positives = 171/182 (93%)
 Frame = +1

Query: 1   VMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRI 180
           +MNIAD PTNVQLPGMYNKEENPRVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRI
Sbjct: 254 LMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRI 313

Query: 181 GVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRL 360
           GVCKGIF+TDNV +E +VK+VD FPGQSIDFFGALRARVYDDEVRKWV   G++ IGK+L
Sbjct: 314 GVCKGIFRTDNVPEEDIVKVVDQFPGQSIDFFGALRARVYDDEVRKWVSEVGVDTIGKKL 373

Query: 361 VNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTG 540
           VNS++GP TFEQPKMT++KLL+YG+MLV+EQ+NVKRVQLAD YMS+AALGDANQDA+K G
Sbjct: 374 VNSKEGPPTFEQPKMTIDKLLQYGNMLVEEQENVKRVQLADKYMSEAALGDANQDAIKRG 433

Query: 541 SF 546
           +F
Sbjct: 434 TF 435
to top
>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
          Length = 439

 Score =  320 bits (821), Expect = 2e-87
 Identities = 153/182 (84%), Positives = 170/182 (93%)
 Frame = +1

Query: 1   VMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRI 180
           +MNIAD PTNVQLPGMYNK+EN RVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRI
Sbjct: 258 LMNIADNPTNVQLPGMYNKQENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRI 317

Query: 181 GVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRL 360
           GVCKGIF+TDNV +E+V+KIVDTFPGQSIDFFGALRARVYDDEVRKWV  TGIE IG +L
Sbjct: 318 GVCKGIFRTDNVPEEAVIKIVDTFPGQSIDFFGALRARVYDDEVRKWVSGTGIEAIGDKL 377

Query: 361 VNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTG 540
           +NS DGP TFEQPKMTVEKLLEYG+MLVQEQ+NVKRVQLA+TY+ +AALGDAN DA+ TG
Sbjct: 378 LNSFDGPPTFEQPKMTVEKLLEYGNMLVQEQENVKRVQLAETYLKEAALGDANADAINTG 437

Query: 541 SF 546
           +F
Sbjct: 438 NF 439
to top
>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 459

 Score =  319 bits (817), Expect = 5e-87
 Identities = 152/180 (84%), Positives = 170/180 (94%)
 Frame = +1

Query: 1   VMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRI 180
           +MNIAD PTNVQLPGMYNK+EN RVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRI
Sbjct: 253 LMNIADNPTNVQLPGMYNKQENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRI 312

Query: 181 GVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRL 360
           GVCKGIF+TDNV +E+VVKIVD+FPGQSIDFFGALRARVYDDEVRKWV  TGIE IG++L
Sbjct: 313 GVCKGIFRTDNVPEEAVVKIVDSFPGQSIDFFGALRARVYDDEVRKWVSGTGIELIGEKL 372

Query: 361 VNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTG 540
           +NSRDGP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLA+TY+ +AALGDAN DA+ TG
Sbjct: 373 LNSRDGPPTFEQPKMTLEKLLEYGNMLVQEQENVKRVQLAETYLKEAALGDANADAINTG 432
to top
>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
          Length = 442

 Score =  315 bits (806), Expect = 9e-86
 Identities = 151/183 (82%), Positives = 165/183 (90%)
 Frame = +1

Query: 1   VMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRI 180
           +MNIAD PTNVQLPGMYNK+EN RVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRI
Sbjct: 258 LMNIADNPTNVQLPGMYNKQENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRI 317

Query: 181 GVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRL 360
           GVC GIF+TDNV  E VVKIVD FPGQSIDFFGALRARVYDDEVRKWV  TGIE IG +L
Sbjct: 318 GVCTGIFRTDNVPAEDVVKIVDNFPGQSIDFFGALRARVYDDEVRKWVSGTGIEKIGDKL 377

Query: 361 VNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTG 540
           +NS DGP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLAD Y+ +AALGDAN DA+  G
Sbjct: 378 LNSFDGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLKEAALGDANADAINNG 437

Query: 541 SFY 549
           SF+
Sbjct: 438 SFF 440
to top
>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 439

 Score =  311 bits (797), Expect = 1e-84
 Identities = 142/183 (77%), Positives = 170/183 (92%)
 Frame = +1

Query: 1   VMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRI 180
           +MNIAD PTNVQLPGMYNKEEN RVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPTRDDR+
Sbjct: 256 LMNIADNPTNVQLPGMYNKEENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRV 315

Query: 181 GVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRL 360
           GVCKGIF+TD V +E + K+VDTFPGQSIDFFGALRARVYDDEVRKW+   G++  GK+L
Sbjct: 316 GVCKGIFRTDGVPEEDITKLVDTFPGQSIDFFGALRARVYDDEVRKWISGVGVDATGKKL 375

Query: 361 VNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTG 540
           VNS++GP TF+QPKM+++KLL+YG+MLVQEQ+NVKRVQLAD Y+++AALG+AN+DA+K+G
Sbjct: 376 VNSKEGPPTFDQPKMSLDKLLQYGNMLVQEQENVKRVQLADKYLNEAALGNANEDAIKSG 435

Query: 541 SFY 549
           SF+
Sbjct: 436 SFF 438
to top
>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 474

 Score =  311 bits (796), Expect = 1e-84
 Identities = 148/184 (80%), Positives = 166/184 (90%)
 Frame = +1

Query: 1   VMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRI 180
           +MNIAD PTNVQLPGMYNKEEN RVPI+ TGNDFSTLYAPLIRDGRMEKFYWAPTR+DRI
Sbjct: 254 LMNIADNPTNVQLPGMYNKEENARVPIICTGNDFSTLYAPLIRDGRMEKFYWAPTREDRI 313

Query: 181 GVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRL 360
           GVCKGIF+TD + DE +V +VD FPGQSIDFFGALRARVYDDEVRK+V S G+E IGKRL
Sbjct: 314 GVCKGIFRTDKIKDEDIVTLVDQFPGQSIDFFGALRARVYDDEVRKFVESLGVEKIGKRL 373

Query: 361 VNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTG 540
           VNSR+GP  FEQP+MT EKL+EYG+MLV EQ+NVKRVQLA+TY+SQAALGDAN DA+  G
Sbjct: 374 VNSREGPPVFEQPEMTYEKLMEYGNMLVMEQENVKRVQLAETYLSQAALGDANADAIGRG 433

Query: 541 SFYG 552
           +FYG
Sbjct: 434 TFYG 437
to top
>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 472

 Score =  310 bits (793), Expect = 3e-84
 Identities = 145/184 (78%), Positives = 167/184 (90%)
 Frame = +1

Query: 1   VMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRI 180
           +MNIAD PTNVQLPGMYNK++N RVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRI
Sbjct: 252 LMNIADNPTNVQLPGMYNKQDNARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRI 311

Query: 181 GVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRL 360
           GVC GIF+TD V  E VVK+VD FPGQSIDFFGALRARVY DEVRKWV S G++N+GK+L
Sbjct: 312 GVCTGIFKTDKVPAEHVVKLVDAFPGQSIDFFGALRARVYHDEVRKWVNSVGVDNVGKKL 371

Query: 361 VNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTG 540
           VNS+DGP  FEQP+MT++KL+EYG+MLVQEQ+NVKRVQLAD YMS AALGDAN+DA+  G
Sbjct: 372 VNSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLADQYMSSAALGDANKDAIDRG 431

Query: 541 SFYG 552
           +F+G
Sbjct: 432 TFFG 435
to top
>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 441

 Score =  301 bits (772), Expect = 8e-82
 Identities = 138/183 (75%), Positives = 168/183 (91%)
 Frame = +1

Query: 1   VMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRI 180
           +MNIAD PTNVQLPGMYNKE+N RVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRI
Sbjct: 258 LMNIADNPTNVQLPGMYNKEDNARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRI 317

Query: 181 GVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRL 360
           GVCKGIF+TD V ++ +V++VD  PGQSIDFFGALRARVYDDEVRKW+   G++++GK+L
Sbjct: 318 GVCKGIFRTDGVPEKDIVELVDKHPGQSIDFFGALRARVYDDEVRKWISGVGVDSVGKKL 377

Query: 361 VNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTG 540
           VNS++GP TF+QPKMT++KLL Y  MLVQEQ+NVKRVQLAD Y+++AALG+AN+DA+K+G
Sbjct: 378 VNSKEGPPTFDQPKMTLDKLLLYASMLVQEQENVKRVQLADQYLNEAALGNANEDAIKSG 437

Query: 541 SFY 549
           SF+
Sbjct: 438 SFF 440
to top
>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 413

 Score =  273 bits (699), Expect = 2e-73
 Identities = 127/159 (79%), Positives = 144/159 (90%)
 Frame = +1

Query: 1   VMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRI 180
           +MNIAD PTNVQLPGMYNKEENPRVPI+VTGNDFSTLYAPLIRDGRM+KFYWAPTR+DRI
Sbjct: 251 LMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRI 310

Query: 181 GVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRL 360
           G+C GIF+TD V  E +VK+VDTFPGQSIDFFGALRARVYDDEVRKW    G+E IG+ L
Sbjct: 311 GICTGIFRTDGVPFEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWAVGVGVERIGRNL 370

Query: 361 VNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQL 477
           VNS++ P TF+QPKMT+EKLLEYG+MLV EQ+NVKRV+L
Sbjct: 371 VNSKESPPTFDQPKMTIEKLLEYGNMLVMEQENVKRVKL 409
to top
>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 408

 Score =  236 bits (602), Expect = 4e-62
 Identities = 116/169 (68%), Positives = 134/169 (79%)
 Frame = +1

Query: 1   VMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRI 180
           +MNIAD PTNVQLPG+Y  EE PRVPIV TGNDFSTLYAPLIRDGRMEK+YW PTR+DRI
Sbjct: 227 LMNIADNPTNVQLPGVYKNEEIPRVPIVCTGNDFSTLYAPLIRDGRMEKYYWNPTREDRI 286

Query: 181 GVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRL 360
           GVC GIFQ DNV    V  +VDTFPGQSIDFFGALRARVYDD VR+W+  TG++ IG++L
Sbjct: 287 GVCMGIFQEDNVQRREVENLVDTFPGQSIDFFGALRARVYDDMVRQWITDTGVDKIGQQL 346

Query: 361 VNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAAL 507
           VN+R   V   +  M +  L++YG  LV EQ+NVKRVQLAD Y+S A L
Sbjct: 347 VNARQ-KVAMPKVSMDLNVLIKYGKSLVDEQENVKRVQLADAYLSGAEL 394
to top
>RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 415

 Score =  196 bits (497), Expect = 6e-50
 Identities = 90/163 (55%), Positives = 119/163 (73%)
 Frame = +1

Query: 1   VMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRI 180
           +MNIAD PT+VQLPG Y+     RVPI+VTGNDFSTLYAPLIRDGRMEKFYW P RD+++
Sbjct: 127 LMNIADNPTDVQLPGSYDSTPLRRVPIIVTGNDFSTLYAPLIRDGRMEKFYWEPHRDEKV 186

Query: 181 GVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRL 360
           G+  GIF  D +S   V K+VD+FP QSIDFF ALR+R+YD+++R ++   G EN+  R+
Sbjct: 187 GIVGGIFAEDGLSQRDVEKLVDSFPNQSIDFFSALRSRIYDEQIRDFIHQVGYENVSLRV 246

Query: 361 VNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTY 489
           VNS +GP  F++P  T+  L+E  + +V EQ  ++  QL D Y
Sbjct: 247 VNSLEGPPAFKKPDFTLSHLIESANFMVAEQKRIETSQLVDEY 289
to top
>RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 414

 Score =  191 bits (484), Expect = 2e-48
 Identities = 89/163 (54%), Positives = 117/163 (71%)
 Frame = +1

Query: 1   VMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRI 180
           +MNIAD PT+VQLPG Y+     RVPI+VTGNDFSTLYAPLIRDGRMEKFYW P RDD++
Sbjct: 127 LMNIADNPTDVQLPGSYDSNPIRRVPIIVTGNDFSTLYAPLIRDGRMEKFYWEPNRDDKV 186

Query: 181 GVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRL 360
           G+  GIF  D +S   + ++VDTFP QSIDFF ALR+R+YD ++R ++   G E I  R+
Sbjct: 187 GIVGGIFAEDGLSQREIEQLVDTFPKQSIDFFSALRSRIYDIQIRDFIHKVGFERISLRV 246

Query: 361 VNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTY 489
           VNS + P  F++P  ++  L+E G++++ EQ  V   QL D Y
Sbjct: 247 VNSLEAPPEFKKPDFSLAHLIESGNLVLGEQQRVDNSQLVDEY 289
to top
>RCA_POPEU (P84562) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast (RuBisCO activase) (RA) (Fragments)
          Length = 32

 Score = 47.0 bits (110), Expect = 4e-05
 Identities = 27/60 (45%), Positives = 30/60 (50%)
 Frame = +1

Query: 238 IVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEK 417
           +VDTFPGQSIDFFGAL                            R+GP TFEQP MT+EK
Sbjct: 1   LVDTFPGQSIDFFGAL----------------------------REGPPTFEQPAMTIEK 32
to top
>SYL_PSESM (Q87VX3) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)|
            (LeuRS)
          Length = 868

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 36/146 (24%), Positives = 58/146 (39%), Gaps = 4/146 (2%)
 Frame = -2

Query: 549  VEGTSLHRILVSITQSCLAHVGVSKLHTLDIVLLLDEHVPVXXXXXXXXXXXLEGHGPVP 370
            VEG+  HR L  + +   AHVG     +LDI  L DE   V            +  G   
Sbjct: 671  VEGS--HRFLRRVWRLAQAHVGQGASGSLDIAALTDEQKAVRRSIHQAIKQASQDIGQNQ 728

Query: 369  RVHQPLANVLDSGRADPLAHLIVVHPSTQSTEKVNGLSWEGVDDLDDRL--VTDIVGLE- 199
            + +  +A V        +  + V+  + Q+T +   L  EG++ +   L  +T  +  E 
Sbjct: 729  KFNTAVAQV--------MTLMNVLEKAPQATPQDRALLQEGLETVTLLLAPITPHISHEL 780

Query: 198  -DTLADTDTVVTGGSPVELLHTTITD 124
               L   + V+  G PV   H  + D
Sbjct: 781  WTQLGHNEPVIDAGWPVFDAHALVQD 806
to top
>EF1A2_XENLA (P17507) Elongation factor 1-alpha, oocyte form (EF-1-alpha-O)|
           (EF-1AO) (42S p48)
          Length = 461

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 24/78 (30%), Positives = 32/78 (41%), Gaps = 8/78 (10%)
 Frame = +1

Query: 382 VTFEQPKMTVE-KLLEYGHMLVQEQ-------DNVKRVQLADTYMSQAALGDANQDAMKT 537
           VTF    +T E K +E  H  +QE         NVK + + D      A    N   M+ 
Sbjct: 278 VTFAPSNVTTEVKSVEMHHEALQEALPGDNVGFNVKNISVKDIRRGNVAGDSKNDPPMQA 337

Query: 538 GSFYG*KILHTHPPSFAA 591
           GSF    I+  HP   +A
Sbjct: 338 GSFTAQVIILNHPGQISA 355
to top
>LEPA_HELPY (O25122) GTP-binding protein lepA|
          Length = 602

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 20/79 (25%), Positives = 37/79 (46%)
 Frame = +1

Query: 235 KIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVE 414
           KI+ T P  S DF   L+A +YD     ++G+         LV   DG +  EQ  + + 
Sbjct: 180 KIITTIPAPSGDFNAPLKALIYDSWFDNYLGALA-------LVRIMDGSINTEQEILVMG 232

Query: 415 KLLEYGHMLVQEQDNVKRV 471
              ++G + +   + +K++
Sbjct: 233 TGKKHGVLGLYYPNPLKKI 251
to top
>YNEI_ECOLI (P76149) Aldehyde dehydrogenase-like protein yneI (EC 1.2.1.-)|
          Length = 462

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = -2

Query: 321 PLAHLIVVHPSTQSTEKVNGLSWEGVDDLDDRLVTDIVGLED 196
           P  H I ++P+T   E+++ L W G DD+++ L     G  D
Sbjct: 5   PATHAISINPATG--EQLSVLPWAGADDIENALQLAAAGFRD 44
to top
>GP116_HUMAN (Q8IZF2) Probable G-protein coupled receptor 116 precursor|
          Length = 1346

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = -3

Query: 485 VSASCTRLTLSCSWTSMCPYSSSFSTVIFGCSKVT 381
           + +SC+R TL    T  CP  SS +TVI+ C  ++
Sbjct: 420 IDSSCSRYTLKADGTQ-CPSGSSGTTVIYTCEFIS 453
to top
>PNPT1_MOUSE (Q8K1R3) Polyribonucleotide nucleotidyltransferase 1, mitochondrial|
           precursor (EC 2.7.7.8) (PNPase 1) (Polynucleotide
           phosphorylase-like protein) (PNPase old-35) (3'-5' RNA
           exonuclease OLD35)
          Length = 783

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 15/62 (24%)
 Frame = -2

Query: 234 DDRLVTDIVGLEDTLADTDTVVTG---------------GSPVELLHTTITDQRSVERRE 100
           D RL+TDI+G+ED   D D  + G               G P++++   I  Q SV ++E
Sbjct: 526 DYRLLTDILGIEDYNGDMDFKIAGTNKGITALQADIKLPGVPIKIIMEAI-QQASVAKKE 584

Query: 99  IV 94
           I+
Sbjct: 585 IL 586
to top
>LRC24_MOUSE (Q8BHA1) Leucine-rich repeat-containing protein 24 precursor|
          Length = 521

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 16/37 (43%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
 Frame = +1

Query: 319 WVGSTGIENIGKRLVNSRDGPVT-FEQPKMTVEKLLE 426
           W+GS  I+  G+RL++SRD  +T  E P++ ++ LLE
Sbjct: 222 WLGSW-IKEGGRRLLSSRDKKITCAEPPRLALQSLLE 257
to top
>PNPT1_PONPY (Q5RCW2) Polyribonucleotide nucleotidyltransferase 1, mitochondrial|
           precursor (EC 2.7.7.8) (PNPase 1)
          Length = 783

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 15/62 (24%)
 Frame = -2

Query: 234 DDRLVTDIVGLEDTLADTDTVVTG---------------GSPVELLHTTITDQRSVERRE 100
           D RL+TDI+G+ED   D D  + G               G P++++   I  Q SV ++E
Sbjct: 526 DYRLLTDILGIEDYNGDMDFKIAGTNKGITALQADIKLPGIPIKIVMEAI-QQASVAKKE 584

Query: 99  IV 94
           I+
Sbjct: 585 IL 586
to top
>PNPT1_HUMAN (Q8TCS8) Polyribonucleotide nucleotidyltransferase 1, mitochondrial|
           precursor (EC 2.7.7.8) (PNPase 1) (Polynucleotide
           phosphorylase-like protein) (PNPase old-35) (3'-5' RNA
           exonuclease OLD35)
          Length = 783

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 15/62 (24%)
 Frame = -2

Query: 234 DDRLVTDIVGLEDTLADTDTVVTG---------------GSPVELLHTTITDQRSVERRE 100
           D RL+TDI+G+ED   D D  + G               G P++++   I  Q SV ++E
Sbjct: 526 DYRLLTDILGIEDYNGDMDFKIAGTNKGITALQADIKLPGIPIKIVMEAI-QQASVAKKE 584

Query: 99  IV 94
           I+
Sbjct: 585 IL 586
to top
>EF1A_ONCVO (P27592) Elongation factor 1-alpha (EF-1-alpha)|
          Length = 464

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 8/78 (10%)
 Frame = +1

Query: 382 VTFEQPKMTVE-KLLEYGHMLVQEQ-------DNVKRVQLADTYMSQAALGDANQDAMKT 537
           VTF    +T E K +E  H  +QE         NVK + + D      A    N  A +T
Sbjct: 278 VTFAPQNLTTEVKSVEMHHEALQEALPGDNVGFNVKNISIKDIRRGSVASDSKNDPAKET 337

Query: 538 GSFYG*KILHTHPPSFAA 591
             F    I+  HP   +A
Sbjct: 338 KMFTAQVIIMNHPGQISA 355
to top
>RPOA_ANAMM (Q5PA81) DNA-directed RNA polymerase alpha chain (EC 2.7.7.6) (RNAP|
           alpha subunit) (Transcriptase alpha chain) (RNA
           polymerase alpha subunit)
          Length = 366

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 15/57 (26%), Positives = 32/57 (56%)
 Frame = +1

Query: 223 ESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFE 393
           + +V  V+T    S D   A+ ARV  D+++ ++GS  +E   ++ V+  +G + ++
Sbjct: 224 DRLVISVETDGSISPDEAVAVSARVLQDQLQSFIGSEEVEGESRKKVDKEEGALPYD 280
to top
>LEPA_LEIXX (Q6AEB5) GTP-binding protein lepA|
          Length = 616

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 26/66 (39%), Positives = 33/66 (50%), Gaps = 9/66 (13%)
 Frame = -2

Query: 357 PLANVLDSGRADP------LAHLIVVHPSTQSTEKVNGLSWEGVDDLDDRLVTDI---VG 205
           P+ N +D   ADP      LA LI   P      +V+G +  GVDDL DR+V +I   VG
Sbjct: 142 PVLNKIDLPAADPDKYAAELAGLIGGKPG--DVLRVSGKTGVGVDDLLDRVVQEIPAPVG 199

Query: 204 LEDTLA 187
             D  A
Sbjct: 200 AADAPA 205
to top
>PTRA_SALTY (Q8ZMB5) Protease 3 precursor (EC 3.4.24.55) (Protease III)|
           (Pitrilysin) (Protease pi)
          Length = 962

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -2

Query: 204 LEDTLADTDTVVTGGSPVELLHTTITDQRSVERREIV 94
           +E   AD+D +V G S V  +  T+TD+    R E+V
Sbjct: 333 VEGISADSDPIVNGNSGVFAISATLTDKGLANRDEVV 369
to top
>PTRA_SALTI (Q8Z418) Protease 3 precursor (EC 3.4.24.55) (Protease III)|
           (Pitrilysin) (Protease pi)
          Length = 962

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -2

Query: 204 LEDTLADTDTVVTGGSPVELLHTTITDQRSVERREIV 94
           +E   AD+D +V G S V  +  T+TD+    R E+V
Sbjct: 333 VEGISADSDPIVNGNSGVFAISATLTDKGLANRDEVV 369
to top
>RL3_CLOPE (Q8XHS3) 50S ribosomal protein L3|
          Length = 209

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
 Frame = +1

Query: 211 NVSDESVVKIVDTFP-GQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVT 387
           NV DE  +K VDTF  G  +D  G  + + +   +++W  S G  + G +   +      
Sbjct: 92  NVGDE--IK-VDTFEIGDKVDVSGVSKGKGFQGTIKRWNASRGPMSHGSKFHRAPGSMGA 148

Query: 388 FEQPKMTVEKLLEYGHM 438
              P  T +     GHM
Sbjct: 149 ASDPSRTFKNKRMPGHM 165


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90,104,117
Number of Sequences: 219361
Number of extensions: 1840545
Number of successful extensions: 6108
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 5842
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6105
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5596027262
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top