>emb|AJ242873.1|HVU242873 Hordeum vulgare mRNA for vacuolar H+-ATPase subunit C
          Length = 1487

 Score =  726 bits (366), Expect = 0.0
 Identities = 442/459 (96%), Gaps = 10/459 (2%)
 Strand = Plus / Plus

                                                                        
Query: 2    gtgagaaaggtttccagatccgtgactttgagtatagtcctgaagcacaggagagtcgga 61
            |||||||||| ||||| || || || || || ||||||||||||||||||||||||||||
Sbjct: 779  gtgagaaaggcttccaaattcgcgatttcgaatatagtcctgaagcacaggagagtcgga 838

                                                                        
Query: 62   agcaagagctagaaaagctgctgcaagaccaggaagtcatgaggacctctc-tattgcaa 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 839  agcaagagctagaaaagctgctgcaagaccaggaagtcatgaggacctctcctattgcaa 898

                                                                        
Query: 121  tgg-tgctatgctagctacagtgagg-tatttagctcctgg-atgcattt--ctctgctg 175
            ||| |||||||||||||||||||||| |||||||||||||| ||||||||  ||||||||
Sbjct: 899  tgggtgctatgctagctacagtgagggtatttagctcctgggatgcattttcctctgctg 958

                                                                        
Query: 176  ttcgtgtcttcgtagagagtattctgagatatgg-tctgcctgcacggttcctgtctgtt 234
            |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 959  ttcgtgtcttcgtagagagtattctgagatatgggtctgcctgcacggttcctgtctgtt 1018

                                                                        
Query: 235  gtcctagcaccatctacaaagagcgagaaaaaagtaaggaacatcttggaagggctatgc 294
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1019 gtcctagcaccatctacaaagagcgagaaaaaagtaaggaacatcttggaagggctatgc 1078

                                                                        
Query: 295  ggcaataccaacagcagctactggagatctgaagacgacgtgggtatggctgctggcctg 354
            |||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1079 ggcaataccaacagc---tactggagatctgaagacgacgtgggtatggctgctggcctg 1135

                                                                        
Query: 355  ggaggcgagacagagtcccacccatacgtgtccttcaccataaactttgtctgagggtgt 414
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1136 ggaggcgagacagagtcccacccatacgtgtccttcaccataaactttgtctgagggtgt 1195

                                                   
Query: 415  ttgatgtatattattttgtgacaccaattctttcatggt 453
            |||||||||||||||||||||||||||||||||||||||
Sbjct: 1196 ttgatgtatattattttgtgacaccaattctttcatggt 1234

>ref|XM_476024.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1134

 Score =  204 bits (103), Expect = 2e-49
 Identities = 238/283 (84%)
 Strand = Plus / Plus

                                                                        
Query: 2    gtgagaaaggtttccagatccgtgactttgagtatagtcctgaagcacaggagagtcgga 61
            |||| |||||||||||| | || || |||||||||||| ||||||||||||| ||| |||
Sbjct: 731  gtgaaaaaggtttccaggttcgcgattttgagtatagttctgaagcacaggaaagtagga 790

                                                                        
Query: 62   agcaagagctagaaaagctgctgcaagaccaggaagtcatgaggacctctctattgcaat 121
            || ||||||| ||||||||  |||||||||||||||  |||||| | || ||  ||||||
Sbjct: 791  aggaagagctggaaaagctaatgcaagaccaggaagcaatgagggcatcacttctgcaat 850

                                                                        
Query: 122  ggtgctatgctagctacagtgaggtatttagctcctggatgcatttctctgctgttcgtg 181
            |||||||||| ||||||||||||||||| || ||||||||||| |||| |||||| ||||
Sbjct: 851  ggtgctatgccagctacagtgaggtattcagttcctggatgcacttctgtgctgtgcgtg 910

                                                                        
Query: 182  tcttcgtagagagtattctgagatatggtctgcctgcacggttcctgtctgttgtcctag 241
            |||| |||||||| ||||| ||||||||||| ||  ||   |||||||||| ||| ||||
Sbjct: 911  tctttgtagagagcattcttagatatggtcttcccccatcattcctgtctgctgttctag 970

                                                       
Query: 242  caccatctacaaagagcgagaaaaaagtaaggaacatcttgga 284
            |||| |||  |||| | || || |||||||||| |||| ||||
Sbjct: 971  caccttctcaaaagggtgaaaagaaagtaaggagcatcctgga 1013

>dbj|AK061855.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-F12, full
            insert sequence
          Length = 1612

 Score =  204 bits (103), Expect = 2e-49
 Identities = 238/283 (84%)
 Strand = Plus / Plus

                                                                        
Query: 2    gtgagaaaggtttccagatccgtgactttgagtatagtcctgaagcacaggagagtcgga 61
            |||| |||||||||||| | || || |||||||||||| ||||||||||||| ||| |||
Sbjct: 821  gtgaaaaaggtttccaggttcgcgattttgagtatagttctgaagcacaggaaagtagga 880

                                                                        
Query: 62   agcaagagctagaaaagctgctgcaagaccaggaagtcatgaggacctctctattgcaat 121
            || ||||||| ||||||||  |||||||||||||||  |||||| | || ||  ||||||
Sbjct: 881  aggaagagctggaaaagctaatgcaagaccaggaagcaatgagggcatcacttctgcaat 940

                                                                        
Query: 122  ggtgctatgctagctacagtgaggtatttagctcctggatgcatttctctgctgttcgtg 181
            |||||||||| ||||||||||||||||| || ||||||||||| |||| |||||| ||||
Sbjct: 941  ggtgctatgccagctacagtgaggtattcagttcctggatgcacttctgtgctgtgcgtg 1000

                                                                        
Query: 182  tcttcgtagagagtattctgagatatggtctgcctgcacggttcctgtctgttgtcctag 241
            |||| |||||||| ||||| ||||||||||| ||  ||   |||||||||| ||| ||||
Sbjct: 1001 tctttgtagagagcattcttagatatggtcttcccccatcattcctgtctgctgttctag 1060

                                                       
Query: 242  caccatctacaaagagcgagaaaaaagtaaggaacatcttgga 284
            |||| |||  |||| | || || |||||||||| |||| ||||
Sbjct: 1061 caccttctcaaaagggtgaaaagaaagtaaggagcatcctgga 1103

>dbj|AK100119.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007J10, full
            insert sequence
          Length = 1681

 Score =  204 bits (103), Expect = 2e-49
 Identities = 238/283 (84%)
 Strand = Plus / Plus

                                                                        
Query: 2    gtgagaaaggtttccagatccgtgactttgagtatagtcctgaagcacaggagagtcgga 61
            |||| |||||||||||| | || || |||||||||||| ||||||||||||| ||| |||
Sbjct: 826  gtgaaaaaggtttccaggttcgcgattttgagtatagttctgaagcacaggaaagtagga 885

                                                                        
Query: 62   agcaagagctagaaaagctgctgcaagaccaggaagtcatgaggacctctctattgcaat 121
            || ||||||| ||||||||  |||||||||||||||  |||||| | || ||  ||||||
Sbjct: 886  aggaagagctggaaaagctaatgcaagaccaggaagcaatgagggcatcacttctgcaat 945

                                                                        
Query: 122  ggtgctatgctagctacagtgaggtatttagctcctggatgcatttctctgctgttcgtg 181
            |||||||||| ||||||||||||||||| || ||||||||||| |||| |||||| ||||
Sbjct: 946  ggtgctatgccagctacagtgaggtattcagttcctggatgcacttctgtgctgtgcgtg 1005

                                                                        
Query: 182  tcttcgtagagagtattctgagatatggtctgcctgcacggttcctgtctgttgtcctag 241
            |||| |||||||| ||||| ||||||||||| ||  ||   |||||||||| ||| ||||
Sbjct: 1006 tctttgtagagagcattcttagatatggtcttcccccatcattcctgtctgctgttctag 1065

                                                       
Query: 242  caccatctacaaagagcgagaaaaaagtaaggaacatcttgga 284
            |||| |||  |||| | || || |||||||||| |||| ||||
Sbjct: 1066 caccttctcaaaagggtgaaaagaaagtaaggagcatcctgga 1108

>gb|BT019108.1| Zea mays clone Contig713.F mRNA sequence
          Length = 984

 Score =  194 bits (98), Expect = 2e-46
 Identities = 233/278 (83%)
 Strand = Plus / Minus

                                                                       
Query: 4   gagaaaggtttccagatccgtgactttgagtatagtcctgaagcacaggagagtcggaag 63
           ||||| ||||| ||||||||||| || ||||| ||||||||||||||||| || |||| |
Sbjct: 748 gagaagggttttcagatccgtgatttcgagtacagtcctgaagcacaggaaagccggatg 689

                                                                       
Query: 64  caagagctagaaaagctgctgcaagaccaggaagtcatgaggacctctctattgcaatgg 123
           || ||| | || ||||| |||| |||||| ||||  ||||||||| ||||  | || |||
Sbjct: 688 caggagatggagaagctactgcgagaccaagaagctatgaggaccactcttcttcagtgg 629

                                                                       
Query: 124 tgctatgctagctacagtgaggtatttagctcctggatgcatttctctgctgttcgtgtc 183
           || ||||| |||||||| |||||||| || ||||||||||| || | |||||| ||||||
Sbjct: 628 tgttatgccagctacagcgaggtattcagttcctggatgcacttttgtgctgtgcgtgtc 569

                                                                       
Query: 184 ttcgtagagagtattctgagatatggtctgcctgcacggttcctgtctgttgtcctagca 243
           || || ||||| ||||| ||||||||||||||  ||   |||||||||| ||| || |||
Sbjct: 568 tttgtggagagcattcttagatatggtctgccgccatcattcctgtctgctgttcttgca 509

                                                 
Query: 244 ccatctacaaagagcgagaaaaaagtaaggaacatctt 281
           |||||||||||||||||||| |||||||||| ||||||
Sbjct: 508 ccatctacaaagagcgagaagaaagtaaggagcatctt 471



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 58/65 (89%)
 Strand = Plus / Minus

                                                                       
Query: 345 tgctggcctgggaggcgagacagagtcccacccatacgtgtccttcaccataaactttgt 404
           |||||| ||||||||||| || ||| | ||||| |||||||||||||||||||| |||||
Sbjct: 410 tgctggtctgggaggcgaaaccgaggcgcacccttacgtgtccttcaccataaattttgt 351

                
Query: 405 ctgag 409
           |||||
Sbjct: 350 ctgag 346

>gb|AY103694.1| Zea mays PCO086635 mRNA sequence
          Length = 1710

 Score =  194 bits (98), Expect = 2e-46
 Identities = 233/278 (83%)
 Strand = Plus / Plus

                                                                        
Query: 4    gagaaaggtttccagatccgtgactttgagtatagtcctgaagcacaggagagtcggaag 63
            ||||| ||||| ||||||||||| || ||||| ||||||||||||||||| || |||| |
Sbjct: 915  gagaagggttttcagatccgtgatttcgagtacagtcctgaagcacaggaaagccggatg 974

                                                                        
Query: 64   caagagctagaaaagctgctgcaagaccaggaagtcatgaggacctctctattgcaatgg 123
            || ||| | || ||||| |||| |||||| ||||  ||||||||| ||||  | || |||
Sbjct: 975  caggagatggagaagctactgcgagaccaagaagctatgaggaccactcttcttcagtgg 1034

                                                                        
Query: 124  tgctatgctagctacagtgaggtatttagctcctggatgcatttctctgctgttcgtgtc 183
            || ||||| |||||||| |||||||| || ||||||||||| || | |||||| ||||||
Sbjct: 1035 tgttatgccagctacagcgaggtattcagttcctggatgcacttttgtgctgtgcgtgtc 1094

                                                                        
Query: 184  ttcgtagagagtattctgagatatggtctgcctgcacggttcctgtctgttgtcctagca 243
            || || ||||| ||||| ||||||||||||||  ||   |||||||||| ||| || |||
Sbjct: 1095 tttgtggagagcattcttagatatggtctgccgccatcattcctgtctgctgttcttgca 1154

                                                  
Query: 244  ccatctacaaagagcgagaaaaaagtaaggaacatctt 281
            |||||||||||||||||||| |||||||||| ||||||
Sbjct: 1155 ccatctacaaagagcgagaagaaagtaaggagcatctt 1192



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 57/65 (87%)
 Strand = Plus / Plus

                                                                        
Query: 345  tgctggcctgggaggcgagacagagtcccacccatacgtgtccttcaccataaactttgt 404
            |||||| ||||||||||| || ||| | ||||| ||||| |||||||||||||| |||||
Sbjct: 1253 tgctggtctgggaggcgaaaccgaggcgcacccttacgtctccttcaccataaattttgt 1312

                 
Query: 405  ctgag 409
            |||||
Sbjct: 1313 ctgag 1317

>gb|AY224442.1| Oryza sativa (japonica cultivar-group) isolate 22866 putative
            vacuolar ATP synthase subunit C mRNA, partial cds
          Length = 1227

 Score =  178 bits (90), Expect = 1e-41
 Identities = 231/278 (83%)
 Strand = Plus / Plus

                                                                        
Query: 2    gtgagaaaggtttccagatccgtgactttgagtatagtcctgaagcacaggagagtcgga 61
            |||| |||||||||||| | || || |||||||||||| ||||||||||||| ||| |||
Sbjct: 851  gtgaaaaaggtttccaggttcgcgattttgagtatagttctgaagcacaggaaagtagga 910

                                                                        
Query: 62   agcaagagctagaaaagctgctgcaagaccaggaagtcatgaggacctctctattgcaat 121
            || ||||||| ||||||||  |||||||||||||||  |||||| | || ||  ||||||
Sbjct: 911  aggaagagctggaaaagctaatgcaagaccaggaagcaatgagggcatcacttctgcaat 970

                                                                        
Query: 122  ggtgctatgctagctacagtgaggtatttagctcctggatgcatttctctgctgttcgtg 181
            |||||||||| ||||||||||||||||| || ||||||||||| |||| |   || ||||
Sbjct: 971  ggtgctatgccagctacagtgaggtattcagttcctggatgcacttctgtctggtgcgtg 1030

                                                                        
Query: 182  tcttcgtagagagtattctgagatatggtctgcctgcacggttcctgtctgttgtcctag 241
            |||| |||||||| ||||| ||||||||||| ||  ||   |||||||||| ||| ||||
Sbjct: 1031 tctttgtagagagcattcttagatatggtcttcccccatcattcctgtctgctgttctag 1090

                                                  
Query: 242  caccatctacaaagagcgagaaaaaagtaaggaacatc 279
            |||| |||  |||| | || || |||||||||| ||||
Sbjct: 1091 caccttctcaaaagggtgaaaagaaagtaaggagcatc 1128

>gb|AC130728.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0663C08,
              complete sequence
          Length = 142196

 Score =  117 bits (59), Expect = 3e-23
 Identities = 104/119 (87%)
 Strand = Plus / Minus

                                                                          
Query: 28     tttgagtatagtcctgaagcacaggagagtcggaagcaagagctagaaaagctgctgcaa 87
              |||||||||||| ||||||||||||| ||| ||||| ||||||| ||||||||  |||||
Sbjct: 107698 tttgagtatagttctgaagcacaggaaagtaggaaggaagagctggaaaagctaatgcaa 107639

                                                                         
Query: 88     gaccaggaagtcatgaggacctctctattgcaatggtgctatgctagctacagtgaggt 146
              ||||||||||  |||||| | || ||  |||||||||||||||| ||||||||||||||
Sbjct: 107638 gaccaggaagcaatgagggcatcacttctgcaatggtgctatgccagctacagtgaggt 107580



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 62/70 (88%)
 Strand = Plus / Minus

                                                                          
Query: 143    aggtatttagctcctggatgcatttctctgctgttcgtgtcttcgtagagagtattctga 202
              ||||||| || ||||||||||| |||| |||||| |||||||| |||||||| ||||| |
Sbjct: 106675 aggtattcagttcctggatgcacttctgtgctgtgcgtgtctttgtagagagcattctta 106616

                        
Query: 203    gatatggtct 212
              ||||||||||
Sbjct: 106615 gatatggtct 106606

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  117 bits (59), Expect = 3e-23
 Identities = 104/119 (87%)
 Strand = Plus / Minus

                                                                            
Query: 28       tttgagtatagtcctgaagcacaggagagtcggaagcaagagctagaaaagctgctgcaa 87
                |||||||||||| ||||||||||||| ||| ||||| ||||||| ||||||||  |||||
Sbjct: 29329041 tttgagtatagttctgaagcacaggaaagtaggaaggaagagctggaaaagctaatgcaa 29328982

                                                                           
Query: 88       gaccaggaagtcatgaggacctctctattgcaatggtgctatgctagctacagtgaggt 146
                ||||||||||  |||||| | || ||  |||||||||||||||| ||||||||||||||
Sbjct: 29328981 gaccaggaagcaatgagggcatcacttctgcaatggtgctatgccagctacagtgaggt 29328923



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 62/70 (88%)
 Strand = Plus / Minus

                                                                            
Query: 143      aggtatttagctcctggatgcatttctctgctgttcgtgtcttcgtagagagtattctga 202
                ||||||| || ||||||||||| |||| |||||| |||||||| |||||||| ||||| |
Sbjct: 29328018 aggtattcagttcctggatgcacttctgtgctgtgcgtgtctttgtagagagcattctta 29327959

                          
Query: 203      gatatggtct 212
                ||||||||||
Sbjct: 29327958 gatatggtct 29327949

>gb|AY107133.1| Zea mays PCO086632 mRNA sequence
          Length = 817

 Score =  111 bits (56), Expect = 2e-21
 Identities = 164/200 (82%)
 Strand = Plus / Plus

                                                                       
Query: 82  ctgcaagaccaggaagtcatgaggacctctctattgcaatggtgctatgctagctacagt 141
           |||| ||| |||||||| ||||||||||| ||  |||||||||||||||| |||||||||
Sbjct: 25  ctgctagagcaggaagttatgaggacctcgcttctgcaatggtgctatgccagctacagt 84

                                                                       
Query: 142 gaggtatttagctcctggatgcatttctctgctgttcgtgtcttcgtagagagtattctg 201
           ||||| || || ||||||||||| ||||  || || ||  | || |||||||| ||||| 
Sbjct: 85  gaggttttcagttcctggatgcacttctgcgccgtgcgcatatttgtagagagcattctt 144

                                                                       
Query: 202 agatatggtctgcctgcacggttcctgtctgttgtcctagcaccatctacaaagagcgag 261
           ||||| ||||||||  ||  |||||||||||  || || || || ||||||||| |||||
Sbjct: 145 agatacggtctgccaccatcgttcctgtctgccgttcttgctccgtctacaaagggcgag 204

                               
Query: 262 aaaaaagtaaggaacatctt 281
           || ||||| |||| ||||||
Sbjct: 205 aagaaagtgaggagcatctt 224



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                       
Query: 345 tgctggcctgggaggcgagacagagtcccacccatacgtgtccttcaccataaactttgt 404
           |||||| |||||||| ||  |||||  ||| || ||||| || |||||||||||||||||
Sbjct: 285 tgctggtctgggaggtgaatcagaggtccatccttacgtctcattcaccataaactttgt 344

                
Query: 405 ctgag 409
            ||||
Sbjct: 345 ttgag 349

>ref|NM_101154.2| Arabidopsis thaliana DET3 (DE-ETIOLATED 3) AT1G12840 (DET3) mRNA,
           complete cds
          Length = 1484

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 138/175 (78%)
 Strand = Plus / Plus

                                                                       
Query: 2   gtgagaaaggtttccagatccgtgactttgagtatagtcctgaagcacaggagagtcgga 61
           |||||||||| |||||  ||||||| |||||  | |||  ||||||||| |||| ||| |
Sbjct: 787 gtgagaaaggattccaagtccgtgattttgaacaaagtgttgaagcacaagagactcgta 846

                                                                       
Query: 62  agcaagagctagaaaagctgctgcaagaccaggaagtcatgaggacctctctattgcaat 121
           | |||||||||| |||| || | || || ||||||    |||| | |||||| ||||| |
Sbjct: 847 aacaagagctagcaaagttggttcaggatcaggaaagtttgagaagctctcttttgcagt 906

                                                                  
Query: 122 ggtgctatgctagctacagtgaggtatttagctcctggatgcatttctctgctgt 176
           |||||||  | || ||  | ||||| || ||||||||||||||||||| ||||||
Sbjct: 907 ggtgctacaccagttatggagaggttttcagctcctggatgcatttctgtgctgt 961

>gb|AF208261.1| Arabidopsis thaliana vacuolar ATP synthase subunit C (DET3) mRNA,
           complete cds
          Length = 1300

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 138/175 (78%)
 Strand = Plus / Plus

                                                                       
Query: 2   gtgagaaaggtttccagatccgtgactttgagtatagtcctgaagcacaggagagtcgga 61
           |||||||||| |||||  ||||||| |||||  | |||  ||||||||| |||| ||| |
Sbjct: 731 gtgagaaaggattccaagtccgtgattttgaacaaagtgttgaagcacaagagactcgta 790

                                                                       
Query: 62  agcaagagctagaaaagctgctgcaagaccaggaagtcatgaggacctctctattgcaat 121
           | |||||||||| |||| || | || || ||||||    |||| | |||||| ||||| |
Sbjct: 791 aacaagagctagcaaagttggttcaggatcaggaaagtttgagaagctctcttttgcagt 850

                                                                  
Query: 122 ggtgctatgctagctacagtgaggtatttagctcctggatgcatttctctgctgt 176
           |||||||  | || ||  | ||||| || ||||||||||||||||||| ||||||
Sbjct: 851 ggtgctacaccagttatggagaggttttcagctcctggatgcatttctgtgctgt 905

>gb|AY093334.1| Arabidopsis thaliana vacuolar ATP sythase subunit C (At1g12840)
           mRNA, complete cds
          Length = 1164

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 138/175 (78%)
 Strand = Plus / Plus

                                                                       
Query: 2   gtgagaaaggtttccagatccgtgactttgagtatagtcctgaagcacaggagagtcgga 61
           |||||||||| |||||  ||||||| |||||  | |||  ||||||||| |||| ||| |
Sbjct: 722 gtgagaaaggattccaagtccgtgattttgaacaaagtgttgaagcacaagagactcgta 781

                                                                       
Query: 62  agcaagagctagaaaagctgctgcaagaccaggaagtcatgaggacctctctattgcaat 121
           | |||||||||| |||| || | || || ||||||    |||| | |||||| ||||| |
Sbjct: 782 aacaagagctagcaaagttggttcaggatcaggaaagtttgagaagctctcttttgcagt 841

                                                                  
Query: 122 ggtgctatgctagctacagtgaggtatttagctcctggatgcatttctctgctgt 176
           |||||||  | || ||  | ||||| || ||||||||||||||||||| ||||||
Sbjct: 842 ggtgctacaccagttatggagaggttttcagctcctggatgcatttctgtgctgt 896

>gb|AY059872.1| Arabidopsis thaliana Identical to vacuolar ATP sythase subunit C
           (DET3) (At1g12840; F13K23.9) mRNA, complete cds
          Length = 1481

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 138/175 (78%)
 Strand = Plus / Plus

                                                                       
Query: 2   gtgagaaaggtttccagatccgtgactttgagtatagtcctgaagcacaggagagtcgga 61
           |||||||||| |||||  ||||||| |||||  | |||  ||||||||| |||| ||| |
Sbjct: 789 gtgagaaaggattccaagtccgtgattttgaacaaagtgttgaagcacaagagactcgta 848

                                                                       
Query: 62  agcaagagctagaaaagctgctgcaagaccaggaagtcatgaggacctctctattgcaat 121
           | |||||||||| |||| || | || || ||||||    |||| | |||||| ||||| |
Sbjct: 849 aacaagagctagcaaagttggttcaggatcaggaaagtttgagaagctctcttttgcagt 908

                                                                  
Query: 122 ggtgctatgctagctacagtgaggtatttagctcctggatgcatttctctgctgt 176
           |||||||  | || ||  | ||||| || ||||||||||||||||||| ||||||
Sbjct: 909 ggtgctacaccagttatggagaggttttcagctcctggatgcatttctgtgctgt 963

>gb|AF334725.1| Arabidopsis thaliana clone C00130 (f) putative vacuolar ATP
           synthase subunit C (At1g12840) mRNA, complete cds
          Length = 1128

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 138/175 (78%)
 Strand = Plus / Plus

                                                                       
Query: 2   gtgagaaaggtttccagatccgtgactttgagtatagtcctgaagcacaggagagtcgga 61
           |||||||||| |||||  ||||||| |||||  | |||  ||||||||| |||| ||| |
Sbjct: 722 gtgagaaaggattccaagtccgtgattttgaacaaagtgttgaagcacaagagactcgta 781

                                                                       
Query: 62  agcaagagctagaaaagctgctgcaagaccaggaagtcatgaggacctctctattgcaat 121
           | |||||||||| |||| || | || || ||||||    |||| | |||||| ||||| |
Sbjct: 782 aacaagagctagcaaagttggttcaggatcaggaaagtttgagaagctctcttttgcagt 841

                                                                  
Query: 122 ggtgctatgctagctacagtgaggtatttagctcctggatgcatttctctgctgt 176
           |||||||  | || ||  | ||||| || ||||||||||||||||||| ||||||
Sbjct: 842 ggtgctacaccagttatggagaggttttcagctcctggatgcatttctgtgctgt 896

>emb|BX816744.1|CNS0ABKA Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH66ZE10 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1360

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 138/175 (78%)
 Strand = Plus / Plus

                                                                       
Query: 2   gtgagaaaggtttccagatccgtgactttgagtatagtcctgaagcacaggagagtcgga 61
           |||||||||| |||||  ||||||| |||||  | |||  ||||||||| |||| ||| |
Sbjct: 724 gtgagaaaggattccaagtccgtgattttgaacaaagtgttgaagcacaagagactcgta 783

                                                                       
Query: 62  agcaagagctagaaaagctgctgcaagaccaggaagtcatgaggacctctctattgcaat 121
           | |||||||||| |||| || | || || ||||||    |||| | |||||| ||||| |
Sbjct: 784 aacaagagctagcaaagttggttcaggatcaggaaagtttgagaagctctcttttgcagt 843

                                                                  
Query: 122 ggtgctatgctagctacagtgaggtatttagctcctggatgcatttctctgctgt 176
           |||||||  | || ||  | ||||| || ||||||||||||||||||| ||||||
Sbjct: 844 ggtgctacaccagttatggagaggttttcagctcctggatgcatttctgtgctgt 898

>emb|BX815324.1|CNS0ABFV Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS51ZG11 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1388

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 138/175 (78%)
 Strand = Plus / Plus

                                                                       
Query: 2   gtgagaaaggtttccagatccgtgactttgagtatagtcctgaagcacaggagagtcgga 61
           |||||||||| |||||  ||||||| |||||  | |||  ||||||||| |||| ||| |
Sbjct: 763 gtgagaaaggattccaagtccgtgattttgaacaaagtgttgaagcacaagagactcgta 822

                                                                       
Query: 62  agcaagagctagaaaagctgctgcaagaccaggaagtcatgaggacctctctattgcaat 121
           | |||||||||| |||| || | || || ||||||    |||| | |||||| ||||| |
Sbjct: 823 aacaagagctagcaaagttggttcaggatcaggaaagtttgagaagctctcttttgcagt 882

                                                                  
Query: 122 ggtgctatgctagctacagtgaggtatttagctcctggatgcatttctctgctgt 176
           |||||||  | || ||  | ||||| || ||||||||||||||||||| ||||||
Sbjct: 883 ggtgctacaccagttatggagaggttttcagctcctggatgcatttctgtgctgt 937

>emb|BX815385.1|CNS0ABBV Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS56ZE09 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1389

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 138/175 (78%)
 Strand = Plus / Plus

                                                                       
Query: 2   gtgagaaaggtttccagatccgtgactttgagtatagtcctgaagcacaggagagtcgga 61
           |||||||||| |||||  ||||||| |||||  | |||  ||||||||| |||| ||| |
Sbjct: 728 gtgagaaaggattccaagtccgtgattttgaacaaagtgttgaagcacaagagactcgta 787

                                                                       
Query: 62  agcaagagctagaaaagctgctgcaagaccaggaagtcatgaggacctctctattgcaat 121
           | |||||||||| |||| || | || || ||||||    |||| | |||||| ||||| |
Sbjct: 788 aacaagagctagcaaagttggttcaggatcaggaaagtttgagaagctctcttttgcagt 847

                                                                  
Query: 122 ggtgctatgctagctacagtgaggtatttagctcctggatgcatttctctgctgt 176
           |||||||  | || ||  | ||||| || ||||||||||||||||||| ||||||
Sbjct: 848 ggtgctacaccagttatggagaggttttcagctcctggatgcatttctgtgctgt 902

>emb|BX255917.3| Zebrafish DNA sequence from clone DKEY-1H6 in linkage group 20
            Contains a novel gene, two transposase genes, a gene for
            a novel zinc finger protein and a gene for a novel
            protein similar to vertebrate MTHFD1, complete sequence
          Length = 218068

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 263  aaaaagtaaggaacatcttgga 284
            ||||||||||||||||||||||
Sbjct: 2672 aaaaagtaaggaacatcttgga 2651

>gb|AC012187.3|F13K23 Sequence of BAC F13K23 from Arabidopsis thaliana chromosome 1, complete
             sequence
          Length = 74328

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 151   agctcctggatgcatttctctgctgt 176
             ||||||||||||||||||| ||||||
Sbjct: 24375 agctcctggatgcatttctgtgctgt 24400

>gb|AC074085.7| Homo sapiens BAC clone RP11-3L10 from 7, complete sequence
          Length = 155260

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 149   ttagctcctggatgcatttct 169
             |||||||||||||||||||||
Sbjct: 59518 ttagctcctggatgcatttct 59498

>ref|XM_466331.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 924

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 201 gagatatggtctgcctgcac 220
           ||||||||||||||||||||
Sbjct: 797 gagatatggtctgcctgcac 816

>gb|CP000141.1| Carboxydothermus hydrogenoformans Z-2901, complete genome
          Length = 2401520

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 262     aaaaaagtaaggaacatcttggaa 285
               |||||||||| |||||||||||||
Sbjct: 1353529 aaaaaagtaatgaacatcttggaa 1353506

>emb|CR705232.2|CNS0G73W Tetraodon nigroviridis full-length cDNA
          Length = 689

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 412 tgtttgatgtatattatttt 431
           ||||||||||||||||||||
Sbjct: 618 tgtttgatgtatattatttt 599

>gb|AC119737.3| Homo sapiens 3 BAC RP11-179A18 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 95650

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 123   gtgctatgctagctacagtg 142
             ||||||||||||||||||||
Sbjct: 51828 gtgctatgctagctacagtg 51847

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 201      gagatatggtctgcctgcac 220
                ||||||||||||||||||||
Sbjct: 21733254 gagatatggtctgcctgcac 21733273

>gb|AY225945.1| Neurospora dodgei strain FGSC 1692 microsatellite TMI sequence
          Length = 455

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 293 gcggcaataccaacagcagc 312
           ||||||||||||||||||||
Sbjct: 360 gcggcaataccaacagcagc 379

>gb|AY225943.1| Neurospora galapagosensis strain FGSC 1739 microsatellite TMI
           sequence
          Length = 470

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 293 gcggcaataccaacagcagc 312
           ||||||||||||||||||||
Sbjct: 360 gcggcaataccaacagcagc 379

>gb|AY225944.1| Neurospora africana strain FGSC 1740 microsatellite TMI sequence
          Length = 461

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 293 gcggcaataccaacagcagc 312
           ||||||||||||||||||||
Sbjct: 360 gcggcaataccaacagcagc 379

>dbj|AP006069.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0025F02
          Length = 156545

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 201    gagatatggtctgcctgcac 220
              ||||||||||||||||||||
Sbjct: 114651 gagatatggtctgcctgcac 114670

>dbj|AP005835.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0008E01
          Length = 156856

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 201   gagatatggtctgcctgcac 220
             ||||||||||||||||||||
Sbjct: 25653 gagatatggtctgcctgcac 25672

>emb|BX072529.5| Zebrafish DNA sequence from clone DKEY-20D17 in linkage group 7,
             complete sequence
          Length = 223845

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 263   aaaaagtaaggaacatcttggaag 286
             ||||| ||||||||||||||||||
Sbjct: 56688 aaaaaataaggaacatcttggaag 56665

>emb|BX005164.9| Mouse DNA sequence from clone RP23-257P3 on chromosome X, complete
              sequence
          Length = 168756

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 269    taaggaacatcttggaaggg 288
              ||||||||||||||||||||
Sbjct: 138656 taaggaacatcttggaaggg 138637

>emb|CR788243.8| Zebrafish DNA sequence from clone DKEY-194O9 in linkage group 7,
             complete sequence
          Length = 113842

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 263   aaaaagtaaggaacatcttggaag 286
             ||||| ||||||||||||||||||
Sbjct: 56900 aaaaaataaggaacatcttggaag 56877

>gb|AC133953.3| Mus musculus BAC clone RP23-144D4 from chromosome 3, complete sequence
          Length = 196827

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 262   aaaaaagtaaggaacatctt 281
             ||||||||||||||||||||
Sbjct: 59329 aaaaaagtaaggaacatctt 59310


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,498,368
Number of Sequences: 3902068
Number of extensions: 4498368
Number of successful extensions: 78876
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 78764
Number of HSP's gapped (non-prelim): 103
length of query: 453
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 431
effective length of database: 17,147,199,772
effective search space: 7390443101732
effective search space used: 7390443101732
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)