| Clone Name | baal38n22 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY568303.1| Triticum aestivum CCAAT-box transcription factor complex WHAP9 (WHAP9) mRNA, complete cds Length = 1199 Score = 339 bits (171), Expect = 7e-90 Identities = 280/313 (89%), Gaps = 10/313 (3%) Strand = Plus / Plus Query: 11 cagcttgaactgaaagca-gagtagaagcccatgagatgagacgcaagcaaaatatgcat 69 ||||||||||||| |||| |||||||| ||||| |||||||||||||||||||||||||| Sbjct: 27 cagcttgaactgagagcaagagtagaaacccataagatgagacgcaagcaaaatatgcat 86 Query: 70 ggtattgttcgattctaatgtggcagttccactctccta-----ctcgactgcatatgtg 124 |||||| ||| ||||||||| |||||||||| ||||| || ||||| |||||| Sbjct: 87 ggtattcttcacttctaatgtttcagttccactatcctatcctacttgactggctatgtg 146 Query: 125 atgtatatactgatttcctgctactgttagagttataccgacatctttt-gtgttcctct 183 ||||||||||||||||||||| |||||||||||||| ||||||||| || ||||||| Sbjct: 147 ctgtatatactgatttcctgctgctgttagagttata---acatctttttgtattcctct 203 Query: 184 gacagaaaatggcacaatcatgattcagtttggtcagcaagtgcctaattacgagtcatc 243 | |||||||||||||||||||||||||||||||||||||||||||||| | |||||| || Sbjct: 204 ggcagaaaatggcacaatcatgattcagtttggtcagcaagtgcctaactgcgagtcctc 263 Query: 244 agctagcgattctcctcgagaagtgtccggaatgagcgaaggaagctttaatgagcagaa 303 |||||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 264 ggctagcgattctcctcaagaagtgtccgggatgagtgaaggaagctttaatgagcagaa 323 Query: 304 tgatcaatctggt 316 ||||||||||||| Sbjct: 324 tgatcaatctggt 336 Score = 291 bits (147), Expect = 2e-75 Identities = 174/183 (95%) Strand = Plus / Plus Query: 436 ggtaatcgtgatggttacacgaagagtgatgaaggcaagatgatgtcggctttatctctg 495 |||||||| ||||| ||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 334 ggtaatcgcgatggctacaccaagagtgatgaaggcaagatgatgtcggctttgtctctg 393 Query: 496 ggcaattcagaaacagcgtacacaccgccaaaacctgaccgcactcatcccttcgccata 555 ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 394 ggcaattcagaaacagcatacacacccccaaaacctgaccgcactcatcccttcgccata 453 Query: 556 tcatacccatatgctgatccttactatggtggtgcggtggcagcttatggcacgcatgct 615 ||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||| Sbjct: 454 tcatacccatatgctgatccttactatggtggtgcagtggcagcctatggcacacatgct 513 Query: 616 att 618 ||| Sbjct: 514 att 516
>gb|AY456087.2| Triticum aestivum CCAAT-box transcription factor complex WHAP2 (WHAP2) mRNA, complete cds Length = 1124 Score = 299 bits (151), Expect = 6e-78 Identities = 175/183 (95%) Strand = Plus / Plus Query: 436 ggtaatcgtgatggttacacgaagagtgatgaaggcaagatgatgtcggctttatctctg 495 |||||||| ||||| ||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 213 ggtaatcgcgatggctacaccaagagtgatgaaggcaagatgatgtcggctttgtctctg 272 Query: 496 ggcaattcagaaacagcgtacacaccgccaaaacctgaccgcactcatcccttcgccata 555 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 273 ggcaattcagaaacagcgtacacacccccaaaacctgaccgcactcatcccttcgccata 332 Query: 556 tcatacccatatgctgatccttactatggtggtgcggtggcagcttatggcacgcatgct 615 ||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||| Sbjct: 333 tcatacccatatgctgatccttactatggtggtgcagtggcagcctatggcacacatgct 392 Query: 616 att 618 ||| Sbjct: 393 att 395 Score = 208 bits (105), Expect = 2e-50 Identities = 123/129 (95%) Strand = Plus / Plus Query: 188 gaaaatggcacaatcatgattcagtttggtcagcaagtgcctaattacgagtcatcagct 247 |||||||||||||||||||||||||||||||||||||||||||| | |||||| |||||| Sbjct: 87 gaaaatggcacaatcatgattcagtttggtcagcaagtgcctaactgcgagtcctcagct 146 Query: 248 agcgattctcctcgagaagtgtccggaatgagcgaaggaagctttaatgagcagaatgat 307 ||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 147 agcgattctcctcaagaagtgtccgggatgagtgaaggaagctttaatgagcagaatgat 206 Query: 308 caatctggt 316 ||||||||| Sbjct: 207 caatctggt 215 Score = 73.8 bits (37), Expect = 7e-10 Identities = 56/61 (91%), Gaps = 1/61 (1%) Strand = Plus / Plus Query: 11 cagcttgaactgaaagca-gagtagaagcccatgagatgagacgcaagcaaaatatgcat 69 ||||||||||||| |||| |||||||| ||||| |||| ||||||||||||||||||||| Sbjct: 27 cagcttgaactgagagcaagagtagaaacccataagataagacgcaagcaaaatatgcat 86 Query: 70 g 70 | Sbjct: 87 g 87
>gb|AY568297.1| Triticum aestivum CCAAT-box transcription factor complex WHAP3 (WHAP3) mRNA, complete cds Length = 932 Score = 291 bits (147), Expect = 2e-75 Identities = 174/183 (95%) Strand = Plus / Plus Query: 436 ggtaatcgtgatggttacacgaagagtgatgaaggcaagatgatgtcggctttatctctg 495 |||||||| ||||| ||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 213 ggtaatcgcgatggctacaccaagagtgatgaaggcaagatgatgtcggctttgtctctg 272 Query: 496 ggcaattcagaaacagcgtacacaccgccaaaacctgaccgcactcatcccttcgccata 555 ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 273 ggcaattcagaaacagcatacacacccccaaaacctgaccgcactcatcccttcgccata 332 Query: 556 tcatacccatatgctgatccttactatggtggtgcggtggcagcttatggcacgcatgct 615 ||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||| Sbjct: 333 tcatacccatatgctgatccttactatggtggtgcagtggcagcctatggcacacatgct 392 Query: 616 att 618 ||| Sbjct: 393 att 395 Score = 200 bits (101), Expect = 4e-48 Identities = 122/129 (94%) Strand = Plus / Plus Query: 188 gaaaatggcacaatcatgattcagtttggtcagcaagtgcctaattacgagtcatcagct 247 |||||||||||||||||||||||| ||||||||||||||||||| | |||||| |||||| Sbjct: 87 gaaaatggcacaatcatgattcagcttggtcagcaagtgcctaactgcgagtcctcagct 146 Query: 248 agcgattctcctcgagaagtgtccggaatgagcgaaggaagctttaatgagcagaatgat 307 ||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 147 agcgattctcctcaagaagtgtccgggatgagtgaaggaagctttaatgagcagaatgat 206 Query: 308 caatctggt 316 ||||||||| Sbjct: 207 caatctggt 215 Score = 77.8 bits (39), Expect = 4e-11 Identities = 55/59 (93%), Gaps = 1/59 (1%) Strand = Plus / Plus Query: 13 gcttgaactgaaagca-gagtagaagcccatgagatgagacgcaagcaaaatatgcatg 70 ||||||||||| |||| |||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 29 gcttgaactgagagcaagagtagaaacccataagatgagacgcaagcaaaatatgcatg 87
>gb|AY568295.1| Triticum aestivum CCAAT-box transcription factor complex WHAP1 (WHAP1) mRNA, complete cds Length = 932 Score = 291 bits (147), Expect = 2e-75 Identities = 174/183 (95%) Strand = Plus / Plus Query: 436 ggtaatcgtgatggttacacgaagagtgatgaaggcaagatgatgtcggctttatctctg 495 |||||||| ||||| ||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 213 ggtaatcgcgatggctacaccaagagtgatgaaggcaagatgatgtcggctttgtctctg 272 Query: 496 ggcaattcagaaacagcgtacacaccgccaaaacctgaccgcactcatcccttcgccata 555 ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 273 ggcaattcagaaacagcatacacacccccaaaacctgaccgcactcatcccttcgccata 332 Query: 556 tcatacccatatgctgatccttactatggtggtgcggtggcagcttatggcacgcatgct 615 ||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||| Sbjct: 333 tcatacccatatgctgatccttactatggtggtgcagtggcagcctatggcacacatgct 392 Query: 616 att 618 ||| Sbjct: 393 att 395 Score = 200 bits (101), Expect = 4e-48 Identities = 122/129 (94%) Strand = Plus / Plus Query: 188 gaaaatggcacaatcatgattcagtttggtcagcaagtgcctaattacgagtcatcagct 247 |||||||||||||||||||||||||||||||||||||||||||| | |||||| |||||| Sbjct: 87 gaaaatggcacaatcatgattcagtttggtcagcaagtgcctaactgcgagtcctcagct 146 Query: 248 agcgattctcctcgagaagtgtccggaatgagcgaaggaagctttaatgagcagaatgat 307 ||||||||||||| |||||||||||| ||||| |||||||||||||||||| |||||||| Sbjct: 147 agcgattctcctcaagaagtgtccgggatgagtgaaggaagctttaatgagtagaatgat 206 Query: 308 caatctggt 316 ||||||||| Sbjct: 207 caatctggt 215 Score = 69.9 bits (35), Expect = 1e-08 Identities = 54/59 (91%), Gaps = 1/59 (1%) Strand = Plus / Plus Query: 11 cagcttgaactgaaagca-gagtagaagcccatgagatgagacgcaagcaaaatatgca 68 ||||||||||||| |||| |||||||| ||||| ||||| ||||||||||||||||||| Sbjct: 27 cagcttgaactgagagcaagagtagaaacccataagatgggacgcaagcaaaatatgca 85
>gb|AY568307.1| Triticum aestivum CCAAT-box transcription factor complex WHAP13 (WHAP13) mRNA, complete cds Length = 931 Score = 283 bits (143), Expect = 4e-73 Identities = 173/183 (94%) Strand = Plus / Plus Query: 436 ggtaatcgtgatggttacacgaagagtgatgaaggcaagatgatgtcggctttatctctg 495 |||||||| ||||| ||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 213 ggtaatcgcgatggctacaccaagagtgatgaaggcaagatgatgtcggctttgtctctg 272 Query: 496 ggcaattcagaaacagcgtacacaccgccaaaacctgaccgcactcatcccttcgccata 555 ||||||||||||||||| |||||||| |||||||||| |||||||||||||||||||||| Sbjct: 273 ggcaattcagaaacagcatacacacccccaaaacctgtccgcactcatcccttcgccata 332 Query: 556 tcatacccatatgctgatccttactatggtggtgcggtggcagcttatggcacgcatgct 615 ||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||| Sbjct: 333 tcatacccatatgctgatccttactatggtggtgcagtggcagcctatggcacacatgct 392 Query: 616 att 618 ||| Sbjct: 393 att 395 Score = 208 bits (105), Expect = 2e-50 Identities = 123/129 (95%) Strand = Plus / Plus Query: 188 gaaaatggcacaatcatgattcagtttggtcagcaagtgcctaattacgagtcatcagct 247 |||||||||||||||||||||||||||||||||||||||||||| | |||||| |||||| Sbjct: 87 gaaaatggcacaatcatgattcagtttggtcagcaagtgcctaactgcgagtcctcagct 146 Query: 248 agcgattctcctcgagaagtgtccggaatgagcgaaggaagctttaatgagcagaatgat 307 ||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 147 agcgattctcctcaagaagtgtccgggatgagtgaaggaagctttaatgagcagaatgat 206 Query: 308 caatctggt 316 ||||||||| Sbjct: 207 caatctggt 215 Score = 81.8 bits (41), Expect = 3e-12 Identities = 57/61 (93%), Gaps = 1/61 (1%) Strand = Plus / Plus Query: 11 cagcttgaactgaaagca-gagtagaagcccatgagatgagacgcaagcaaaatatgcat 69 ||||||||||||| |||| |||||||| ||||| |||||||||||||||||||||||||| Sbjct: 27 cagcttgaactgagagcaagagtagaaacccataagatgagacgcaagcaaaatatgcat 86 Query: 70 g 70 | Sbjct: 87 g 87
>gb|AY568299.1| Triticum aestivum CCAAT-box transcription factor complex WHAP5 (WHAP5) mRNA, complete cds Length = 931 Score = 283 bits (143), Expect = 4e-73 Identities = 173/183 (94%) Strand = Plus / Plus Query: 436 ggtaatcgtgatggttacacgaagagtgatgaaggcaagatgatgtcggctttatctctg 495 |||||||| ||||| ||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 212 ggtaatcgcgatggctacaccaagagtgatgaaggcaagatgatgtcggctttgtctctg 271 Query: 496 ggcaattcagaaacagcgtacacaccgccaaaacctgaccgcactcatcccttcgccata 555 ||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 272 ggcaattcagaaacagcatacgcacccccaaaacctgaccgcactcatcccttcgccata 331 Query: 556 tcatacccatatgctgatccttactatggtggtgcggtggcagcttatggcacgcatgct 615 ||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||| Sbjct: 332 tcatacccatatgctgatccttactatggtggtgcagtggcagcctatggcacacatgct 391 Query: 616 att 618 ||| Sbjct: 392 att 394 Score = 208 bits (105), Expect = 2e-50 Identities = 123/129 (95%) Strand = Plus / Plus Query: 188 gaaaatggcacaatcatgattcagtttggtcagcaagtgcctaattacgagtcatcagct 247 |||||||||||||||||||||||||||||||||||||||||||| | |||||| |||||| Sbjct: 86 gaaaatggcacaatcatgattcagtttggtcagcaagtgcctaactgcgagtcctcagct 145 Query: 248 agcgattctcctcgagaagtgtccggaatgagcgaaggaagctttaatgagcagaatgat 307 ||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 146 agcgattctcctcaagaagtgtccgggatgagtgaaggaagctttaatgagcagaatgat 205 Query: 308 caatctggt 316 ||||||||| Sbjct: 206 caatctggt 214 Score = 81.8 bits (41), Expect = 3e-12 Identities = 57/61 (93%), Gaps = 1/61 (1%) Strand = Plus / Plus Query: 11 cagcttgaactgaaagca-gagtagaagcccatgagatgagacgcaagcaaaatatgcat 69 ||||||||||||| |||| |||||||| ||||| |||||||||||||||||||||||||| Sbjct: 26 cagcttgaactgagagcaagagtagaaacccataagatgagacgcaagcaaaatatgcat 85 Query: 70 g 70 | Sbjct: 86 g 86
>gb|AY568298.1| Triticum aestivum CCAAT-box transcription factor complex WHAP4 (WHAP4) mRNA, complete cds Length = 930 Score = 283 bits (143), Expect = 4e-73 Identities = 173/183 (94%) Strand = Plus / Plus Query: 436 ggtaatcgtgatggttacacgaagagtgatgaaggcaagatgatgtcggctttatctctg 495 |||||||| ||||| ||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 213 ggtaatcgcgatggctacaccaagagtgatgaaggcaagatgatgtcggctttgtctctg 272 Query: 496 ggcaattcagaaacagcgtacacaccgccaaaacctgaccgcactcatcccttcgccata 555 ||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 273 ggcaattcagaaacagcatacacacccccaaagcctgaccgcactcatcccttcgccata 332 Query: 556 tcatacccatatgctgatccttactatggtggtgcggtggcagcttatggcacgcatgct 615 ||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||| Sbjct: 333 tcatacccatatgctgatccttactatggtggtgcagtggcagcctatggcacacatgct 392 Query: 616 att 618 ||| Sbjct: 393 att 395 Score = 208 bits (105), Expect = 2e-50 Identities = 123/129 (95%) Strand = Plus / Plus Query: 188 gaaaatggcacaatcatgattcagtttggtcagcaagtgcctaattacgagtcatcagct 247 |||||||||||||||||||||||||||||||||||||||||||| | |||||| |||||| Sbjct: 87 gaaaatggcacaatcatgattcagtttggtcagcaagtgcctaactgcgagtcctcagct 146 Query: 248 agcgattctcctcgagaagtgtccggaatgagcgaaggaagctttaatgagcagaatgat 307 ||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 147 agcgattctcctcaagaagtgtccgggatgagtgaaggaagctttaatgagcagaatgat 206 Query: 308 caatctggt 316 ||||||||| Sbjct: 207 caatctggt 215 Score = 81.8 bits (41), Expect = 3e-12 Identities = 57/61 (93%), Gaps = 1/61 (1%) Strand = Plus / Plus Query: 11 cagcttgaactgaaagca-gagtagaagcccatgagatgagacgcaagcaaaatatgcat 69 ||||||||||||| |||| |||||||| ||||| |||||||||||||||||||||||||| Sbjct: 27 cagcttgaactgagagcaagagtagaaacccataagatgagacgcaagcaaaatatgcat 86 Query: 70 g 70 | Sbjct: 87 g 87
>gb|AY568306.1| Triticum aestivum CCAAT-box transcription factor complex WHAP12 (WHAP12) mRNA, complete cds Length = 926 Score = 276 bits (139), Expect = 9e-71 Identities = 172/183 (93%) Strand = Plus / Plus Query: 436 ggtaatcgtgatggttacacgaagagtgatgaaggcaagatgatgtcggctttatctctg 495 ||||| || ||||| |||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 213 ggtaaccgcgatggctacacgaagagtgatgaaggcaagatgatgtcagctttgtctctg 272 Query: 496 ggcaattcagaaacagcgtacacaccgccaaaacctgaccgcactcatcccttcgccata 555 ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| Sbjct: 273 ggcaattcagaaacagcatacacaccgccaaaacctgaccgcactcatccctttgccata 332 Query: 556 tcatacccatatgctgatccttactatggtggtgcggtggcagcttatggcacgcatgct 615 ||||||||||||||||||||||||||||||||||| |||||||| |||||| | |||||| Sbjct: 333 tcatacccatatgctgatccttactatggtggtgcagtggcagcctatggcgcacatgct 392 Query: 616 att 618 ||| Sbjct: 393 att 395 Score = 208 bits (105), Expect = 2e-50 Identities = 123/129 (95%) Strand = Plus / Plus Query: 188 gaaaatggcacaatcatgattcagtttggtcagcaagtgcctaattacgagtcatcagct 247 ||||||||||||||||||||||||||||||||| |||||||||| | |||||| |||||| Sbjct: 87 gaaaatggcacaatcatgattcagtttggtcagtaagtgcctaactgcgagtcctcagct 146 Query: 248 agcgattctcctcgagaagtgtccggaatgagcgaaggaagctttaatgagcagaatgat 307 ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 147 agcgattctcctcaagaggtgtccggaatgagcgaaggaagctttaatgagcagaatgat 206 Query: 308 caatctggt 316 ||||||||| Sbjct: 207 caatctggt 215 Score = 97.6 bits (49), Expect = 5e-17 Identities = 59/61 (96%), Gaps = 1/61 (1%) Strand = Plus / Plus Query: 11 cagcttgaactgaaagca-gagtagaagcccatgagatgagacgcaagcaaaatatgcat 69 ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 27 cagcttgaactgagagcaagagtagaagcccatgagatgagacgcaagcaaaatatgcat 86 Query: 70 g 70 | Sbjct: 87 g 87
>gb|AY568304.1| Triticum aestivum CCAAT-box transcription factor complex WHAP10 (WHAP10) mRNA, complete cds Length = 932 Score = 276 bits (139), Expect = 9e-71 Identities = 172/183 (93%) Strand = Plus / Plus Query: 436 ggtaatcgtgatggttacacgaagagtgatgaaggcaagatgatgtcggctttatctctg 495 |||||||| ||||| ||||| |||||||||| |||||||| |||||||||||| |||||| Sbjct: 213 ggtaatcgcgatggctacaccaagagtgatggaggcaagacgatgtcggctttgtctctg 272 Query: 496 ggcaattcagaaacagcgtacacaccgccaaaacctgaccgcactcatcccttcgccata 555 ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 273 ggcaattcagaaacagcatacacacccccaaaacctgaccgcactcatcccttcgccata 332 Query: 556 tcatacccatatgctgatccttactatggtggtgcggtggcagcttatggcacgcatgct 615 ||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||| Sbjct: 333 tcatacccatatgctgatccttactatggtggtgcagtggcagcctatggcacacatgct 392 Query: 616 att 618 ||| Sbjct: 393 att 395 Score = 208 bits (105), Expect = 2e-50 Identities = 123/129 (95%) Strand = Plus / Plus Query: 188 gaaaatggcacaatcatgattcagtttggtcagcaagtgcctaattacgagtcatcagct 247 |||||||||||||||||||||||||||||||||||||||||||| | |||||| |||||| Sbjct: 87 gaaaatggcacaatcatgattcagtttggtcagcaagtgcctaactgcgagtcctcagct 146 Query: 248 agcgattctcctcgagaagtgtccggaatgagcgaaggaagctttaatgagcagaatgat 307 ||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 147 agcgattctcctcaagaagtgtccgggatgagtgaaggaagctttaatgagcagaatgat 206 Query: 308 caatctggt 316 ||||||||| Sbjct: 207 caatctggt 215 Score = 81.8 bits (41), Expect = 3e-12 Identities = 57/61 (93%), Gaps = 1/61 (1%) Strand = Plus / Plus Query: 11 cagcttgaactgaaagca-gagtagaagcccatgagatgagacgcaagcaaaatatgcat 69 ||||||||||||| |||| |||||||| ||||| |||||||||||||||||||||||||| Sbjct: 27 cagcttgaactgagagcaagagtagaaacccataagatgagacgcaagcaaaatatgcat 86 Query: 70 g 70 | Sbjct: 87 g 87
>gb|AY568302.1| Triticum aestivum CCAAT-box transcription factor complex WHAP8 (WHAP8) mRNA, complete cds Length = 926 Score = 276 bits (139), Expect = 9e-71 Identities = 172/183 (93%) Strand = Plus / Plus Query: 436 ggtaatcgtgatggttacacgaagagtgatgaaggcaagatgatgtcggctttatctctg 495 ||||| || ||||| |||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 213 ggtaaccgcgatggctacacgaagagtgatgaaggcaagatgatgtcagctttgtctctg 272 Query: 496 ggcaattcagaaacagcgtacacaccgccaaaacctgaccgcactcatcccttcgccata 555 ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| Sbjct: 273 ggcaattcagaaacagcatacacaccgccaaaacctgaccgcactcatccctttgccata 332 Query: 556 tcatacccatatgctgatccttactatggtggtgcggtggcagcttatggcacgcatgct 615 ||||||||||||||||||||||||||||||||||| |||||||| |||||| | |||||| Sbjct: 333 tcatacccatatgctgatccttactatggtggtgcagtggcagcctatggcgcacatgct 392 Query: 616 att 618 ||| Sbjct: 393 att 395 Score = 208 bits (105), Expect = 2e-50 Identities = 123/129 (95%) Strand = Plus / Plus Query: 188 gaaaatggcacaatcatgattcagtttggtcagcaagtgcctaattacgagtcatcagct 247 |||||||||| ||||||||||||||||||||||||||||||||| | |||||| |||||| Sbjct: 87 gaaaatggcataatcatgattcagtttggtcagcaagtgcctaactgcgagtcctcagct 146 Query: 248 agcgattctcctcgagaagtgtccggaatgagcgaaggaagctttaatgagcagaatgat 307 ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 147 agcgattctcctcaagaggtgtccggaatgagcgaaggaagctttaatgagcagaatgat 206 Query: 308 caatctggt 316 ||||||||| Sbjct: 207 caatctggt 215 Score = 97.6 bits (49), Expect = 5e-17 Identities = 59/61 (96%), Gaps = 1/61 (1%) Strand = Plus / Plus Query: 11 cagcttgaactgaaagca-gagtagaagcccatgagatgagacgcaagcaaaatatgcat 69 ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 27 cagcttgaactgagagcaagagtagaagcccatgagatgagacgcaagcaaaatatgcat 86 Query: 70 g 70 | Sbjct: 87 g 87
>gb|AY568300.1| Triticum aestivum CCAAT-box transcription factor complex WHAP6 (WHAP6) mRNA, complete cds Length = 927 Score = 276 bits (139), Expect = 9e-71 Identities = 172/183 (93%) Strand = Plus / Plus Query: 436 ggtaatcgtgatggttacacgaagagtgatgaaggcaagatgatgtcggctttatctctg 495 ||||| || ||||| |||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 213 ggtaaccgcgatggctacacgaagagtgatgaaggcaagatgatgtcagctttgtctctg 272 Query: 496 ggcaattcagaaacagcgtacacaccgccaaaacctgaccgcactcatcccttcgccata 555 ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| Sbjct: 273 ggcaattcagaaacagcatacacaccgccaaaacctgaccgcactcatccctttgccata 332 Query: 556 tcatacccatatgctgatccttactatggtggtgcggtggcagcttatggcacgcatgct 615 ||||||||||||||||||||||||||||||||||| |||||||| |||||| | |||||| Sbjct: 333 tcatacccatatgctgatccttactatggtggtgcagtggcagcctatggcgcacatgct 392 Query: 616 att 618 ||| Sbjct: 393 att 395 Score = 216 bits (109), Expect = 7e-53 Identities = 124/129 (96%) Strand = Plus / Plus Query: 188 gaaaatggcacaatcatgattcagtttggtcagcaagtgcctaattacgagtcatcagct 247 |||||||||||||||||||||||||||||||||||||||||||| | |||||| |||||| Sbjct: 87 gaaaatggcacaatcatgattcagtttggtcagcaagtgcctaactgcgagtcctcagct 146 Query: 248 agcgattctcctcgagaagtgtccggaatgagcgaaggaagctttaatgagcagaatgat 307 ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 147 agcgattctcctcaagaggtgtccggaatgagcgaaggaagctttaatgagcagaatgat 206 Query: 308 caatctggt 316 ||||||||| Sbjct: 207 caatctggt 215 Score = 97.6 bits (49), Expect = 5e-17 Identities = 59/61 (96%), Gaps = 1/61 (1%) Strand = Plus / Plus Query: 11 cagcttgaactgaaagca-gagtagaagcccatgagatgagacgcaagcaaaatatgcat 69 ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 27 cagcttgaactgagagcaagagtagaagcccatgagatgagacgcaagcaaaatatgcat 86 Query: 70 g 70 | Sbjct: 87 g 87
>gb|AY568305.1| Triticum aestivum CCAAT-box transcription factor complex WHAP11 (WHAP11) mRNA, complete cds Length = 927 Score = 268 bits (135), Expect = 2e-68 Identities = 171/183 (93%) Strand = Plus / Plus Query: 436 ggtaatcgtgatggttacacgaagagtgatgaaggcaagatgatgtcggctttatctctg 495 ||||| || ||||| |||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 213 ggtaaccgcgatggctacacgaagagtgatgaaggcaagatgatgtcagctttgtctctg 272 Query: 496 ggcaattcagaaacagcgtacacaccgccaaaacctgaccgcactcatcccttcgccata 555 ||||||||||||||||| ||||||||||||||||||||||||||||||||| | |||||| Sbjct: 273 ggcaattcagaaacagcatacacaccgccaaaacctgaccgcactcatccccttgccata 332 Query: 556 tcatacccatatgctgatccttactatggtggtgcggtggcagcttatggcacgcatgct 615 ||||||||||||||||||||||||||||||||||| |||||||| |||||| | |||||| Sbjct: 333 tcatacccatatgctgatccttactatggtggtgcagtggcagcctatggcgcacatgct 392 Query: 616 att 618 ||| Sbjct: 393 att 395 Score = 216 bits (109), Expect = 7e-53 Identities = 124/129 (96%) Strand = Plus / Plus Query: 188 gaaaatggcacaatcatgattcagtttggtcagcaagtgcctaattacgagtcatcagct 247 |||||||||||||||||||||||||||||||||||||||||||| | |||||| |||||| Sbjct: 87 gaaaatggcacaatcatgattcagtttggtcagcaagtgcctaactgcgagtcctcagct 146 Query: 248 agcgattctcctcgagaagtgtccggaatgagcgaaggaagctttaatgagcagaatgat 307 ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 147 agcgattctcctcaagaggtgtccggaatgagcgaaggaagctttaatgagcagaatgat 206 Query: 308 caatctggt 316 ||||||||| Sbjct: 207 caatctggt 215 Score = 97.6 bits (49), Expect = 5e-17 Identities = 59/61 (96%), Gaps = 1/61 (1%) Strand = Plus / Plus Query: 11 cagcttgaactgaaagca-gagtagaagcccatgagatgagacgcaagcaaaatatgcat 69 ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 27 cagcttgaactgagagcaagagtagaagcccatgagatgagacgcaagcaaaatatgcat 86 Query: 70 g 70 | Sbjct: 87 g 87
>gb|AY568301.1| Triticum aestivum CCAAT-box transcription factor complex WHAP7 (WHAP7) mRNA, complete cds Length = 927 Score = 268 bits (135), Expect = 2e-68 Identities = 171/183 (93%) Strand = Plus / Plus Query: 436 ggtaatcgtgatggttacacgaagagtgatgaaggcaagatgatgtcggctttatctctg 495 ||||| || ||||| |||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 213 ggtaaccgcgatggctacacgaagagtgatgaaggcaagatgatgtcagctttgtctctg 272 Query: 496 ggcaattcagaaacagcgtacacaccgccaaaacctgaccgcactcatcccttcgccata 555 |||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||||| Sbjct: 273 ggcaattctgaaacagcatacacaccgccaaaacctgaccgcactcatccctttgccata 332 Query: 556 tcatacccatatgctgatccttactatggtggtgcggtggcagcttatggcacgcatgct 615 ||||||||||||||||||||||||||||||||||| |||||||| |||||| | |||||| Sbjct: 333 tcatacccatatgctgatccttactatggtggtgcagtggcagcctatggcgcacatgct 392 Query: 616 att 618 ||| Sbjct: 393 att 395 Score = 208 bits (105), Expect = 2e-50 Identities = 123/129 (95%) Strand = Plus / Plus Query: 188 gaaaatggcacaatcatgattcagtttggtcagcaagtgcctaattacgagtcatcagct 247 ||||||||||||||||||||||||||||| |||||||||||||| | |||||| |||||| Sbjct: 87 gaaaatggcacaatcatgattcagtttggccagcaagtgcctaactgcgagtcctcagct 146 Query: 248 agcgattctcctcgagaagtgtccggaatgagcgaaggaagctttaatgagcagaatgat 307 ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 147 agcgattctcctcaagaggtgtccggaatgagcgaaggaagctttaatgagcagaatgat 206 Query: 308 caatctggt 316 ||||||||| Sbjct: 207 caatctggt 215 Score = 97.6 bits (49), Expect = 5e-17 Identities = 59/61 (96%), Gaps = 1/61 (1%) Strand = Plus / Plus Query: 11 cagcttgaactgaaagca-gagtagaagcccatgagatgagacgcaagcaaaatatgcat 69 ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 27 cagcttgaactgagagcaagagtagaagcccatgagatgagacgcaagcaaaatatgcat 86 Query: 70 g 70 | Sbjct: 87 g 87
>gb|BT009512.1| Triticum aestivum clone wr1.pk0094.f2:fis, full insert mRNA sequence Length = 1061 Score = 246 bits (124), Expect = 8e-62 Identities = 171/186 (91%), Gaps = 3/186 (1%) Strand = Plus / Plus Query: 436 ggtaatcgtgatggttacacgaagagt---gatgaaggcaagatgatgtcggctttatct 492 |||||||| ||||| || ||||||||| |||||||||||||||||||||||||| ||| Sbjct: 45 ggtaatcgcgatggctatacgaagagtagtgatgaaggcaagatgatgtcggctttgtct 104 Query: 493 ctgggcaattcagaaacagcgtacacaccgccaaaacctgaccgcactcatcccttcgcc 552 |||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||| Sbjct: 105 ctgggcaattcagaaatggcatacacaccgccaaaacctgaccgcactcatccctttgcc 164 Query: 553 atatcatacccatatgctgatccttactatggtggtgcggtggcagcttatggcacgcat 612 |||||||||||||||||||||||||||||||||||||| |||||||| |||||| | ||| Sbjct: 165 atatcatacccatatgctgatccttactatggtggtgcagtggcagcctatggcgcacat 224 Query: 613 gctatt 618 |||||| Sbjct: 225 gctatt 230 Score = 71.9 bits (36), Expect = 3e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 277 gagcgaaggaagctttaatgagcagaatgatcaatctggt 316 ||||||||| |||||||||||||||||||||||||||||| Sbjct: 8 gagcgaagggagctttaatgagcagaatgatcaatctggt 47
>dbj|AK069348.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023014B08, full insert sequence Length = 1253 Score = 157 bits (79), Expect = 6e-35 Identities = 166/195 (85%) Strand = Plus / Plus Query: 424 gtactaatactaggtaatcgtgatggttacacgaagagtgatgaaggcaagatgatgtcg 483 |||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||| Sbjct: 398 gtactaatgctaggtaatcttgatggttacacgaagagtgatgaaggtaagatgatgtca 457 Query: 484 gctttatctctgggcaattcagaaacagcgtacacaccgccaaaacctgaccgcactcat 543 ||||||||||||||||| |||||||| | ||| ||| | |||||||||| | || Sbjct: 458 gctttatctctgggcaaatcagaaactgtgtatgcacattcggaacctgaccgtagccaa 517 Query: 544 cccttcgccatatcatacccatatgctgatccttactatggtggtgcggtggcagcttat 603 ||||| | ||||||||| |||||||||||| | | |||||||||||| || || ||||| Sbjct: 518 ccctttggcatatcatatccatatgctgattcgttctatggtggtgctgtagcgacttat 577 Query: 604 ggcacgcatgctatt 618 ||||| ||||||||| Sbjct: 578 ggcacacatgctatt 592 Score = 95.6 bits (48), Expect = 2e-16 Identities = 60/64 (93%) Strand = Plus / Plus Query: 254 tctcctcgagaagtgtccggaatgagcgaaggaagctttaatgagcagaatgatcaatct 313 |||||||| |||||||| |||||||||||||||||| | ||||||||||||||||||||| Sbjct: 193 tctcctcgtgaagtgtctggaatgagcgaaggaagcctcaatgagcagaatgatcaatct 252 Query: 314 ggtt 317 |||| Sbjct: 253 ggtt 256 Score = 71.9 bits (36), Expect = 3e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 185 acagaaaatggcacaatcatgattcagtttggtcagcaagtgcctaattacgagtcatca 244 ||||||||||||||| | ||||||||||||||||| || ||||| | |||||||||||| Sbjct: 112 acagaaaatggcacagtaatgattcagtttggtcataaaatgcctgactacgagtcatca 171 Query: 245 gcta 248 |||| Sbjct: 172 gcta 175
>emb|Y10905.1|OSRAPB Oryza sativa mRNA RAPB protein Length = 1020 Score = 141 bits (71), Expect = 3e-30 Identities = 155/183 (84%) Strand = Plus / Plus Query: 436 ggtaatcgtgatggttacacgaagagtgatgaaggcaagatgatgtcggctttatctctg 495 ||||||| ||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 224 ggtaatcttgatggttacacgaagagtgatgaaggtaagatgatgtcagctttatctctg 283 Query: 496 ggcaattcagaaacagcgtacacaccgccaaaacctgaccgcactcatcccttcgccata 555 ||||| |||||||| | ||| ||| | |||||||||| | || ||||| | |||| Sbjct: 284 ggcaaatcagaaactgtgtatgcacattcggaacctgaccgtagccaaccctttggcata 343 Query: 556 tcatacccatatgctgatccttactatggtggtgcggtggcagcttatggcacgcatgct 615 ||||| |||||||||||| | | |||||||||||| || || |||||||||| |||||| Sbjct: 344 tcatatccatatgctgattcgttctatggtggtgctgtagcgacttatggcacacatgct 403 Query: 616 att 618 ||| Sbjct: 404 att 406 Score = 93.7 bits (47), Expect = 7e-16 Identities = 59/63 (93%) Strand = Plus / Plus Query: 254 tctcctcgagaagtgtccggaatgagcgaaggaagctttaatgagcagaatgatcaatct 313 |||||||| |||||||| |||||||||||||||||| | ||||||||||||||||||||| Sbjct: 164 tctcctcgtgaagtgtctggaatgagcgaaggaagcctcaatgagcagaatgatcaatct 223 Query: 314 ggt 316 ||| Sbjct: 224 ggt 226 Score = 71.9 bits (36), Expect = 3e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 185 acagaaaatggcacaatcatgattcagtttggtcagcaagtgcctaattacgagtcatca 244 ||||||||||||||| | ||||||||||||||||| || ||||| | |||||||||||| Sbjct: 83 acagaaaatggcacagtaatgattcagtttggtcataaaatgcctgactacgagtcatca 142 Query: 245 gcta 248 |||| Sbjct: 143 gcta 146
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 131 bits (66), Expect = 3e-27 Identities = 81/86 (94%) Strand = Plus / Minus Query: 424 gtactaatactaggtaatcgtgatggttacacgaagagtgatgaaggcaagatgatgtcg 483 |||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||| Sbjct: 3985330 gtactaatgctaggtaatcttgatggttacacgaagagtgatgaaggtaagatgatgtca 3985271 Query: 484 gctttatctctgggcaattcagaaac 509 ||||||||||||||||| |||||||| Sbjct: 3985270 gctttatctctgggcaaatcagaaac 3985245 Score = 95.6 bits (48), Expect = 2e-16 Identities = 60/64 (93%) Strand = Plus / Minus Query: 254 tctcctcgagaagtgtccggaatgagcgaaggaagctttaatgagcagaatgatcaatct 313 |||||||| |||||||| |||||||||||||||||| | ||||||||||||||||||||| Sbjct: 3985535 tctcctcgtgaagtgtctggaatgagcgaaggaagcctcaatgagcagaatgatcaatct 3985476 Query: 314 ggtt 317 |||| Sbjct: 3985475 ggtt 3985472 Score = 73.8 bits (37), Expect = 7e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 552 catatcatacccatatgctgatccttactatggtggtgcggtggcagcttatggcacgca 611 ||||||||| |||||||||||| | | |||||||||||| || || |||||||||| || Sbjct: 3985113 catatcatatccatatgctgattcgttctatggtggtgctgtagcgacttatggcacaca 3985054 Query: 612 tgctattgtgagtgatatttatgctatcc 640 ||||||||| ||||| ||| |||||||| Sbjct: 3985053 tgctattgtaagtgacctttgtgctatcc 3985025 Score = 69.9 bits (35), Expect = 1e-08 Identities = 56/63 (88%) Strand = Plus / Minus Query: 186 cagaaaatggcacaatcatgattcagtttggtcagcaagtgcctaattacgagtcatcag 245 |||||||||||||| | ||||||||||||||||| || ||||| | ||||||||||||| Sbjct: 3985615 cagaaaatggcacagtaatgattcagtttggtcataaaatgcctgactacgagtcatcag 3985556 Query: 246 cta 248 ||| Sbjct: 3985555 cta 3985553 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 403 ttctccatttgtttcctctt 422 |||||||||||||||||||| Sbjct: 18237325 ttctccatttgtttcctctt 18237344
>gb|AC090484.4| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0061L19, from chromosome 3, complete sequence Length = 153322 Score = 131 bits (66), Expect = 3e-27 Identities = 81/86 (94%) Strand = Plus / Plus Query: 424 gtactaatactaggtaatcgtgatggttacacgaagagtgatgaaggcaagatgatgtcg 483 |||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||| Sbjct: 114038 gtactaatgctaggtaatcttgatggttacacgaagagtgatgaaggtaagatgatgtca 114097 Query: 484 gctttatctctgggcaattcagaaac 509 ||||||||||||||||| |||||||| Sbjct: 114098 gctttatctctgggcaaatcagaaac 114123 Score = 95.6 bits (48), Expect = 2e-16 Identities = 60/64 (93%) Strand = Plus / Plus Query: 254 tctcctcgagaagtgtccggaatgagcgaaggaagctttaatgagcagaatgatcaatct 313 |||||||| |||||||| |||||||||||||||||| | ||||||||||||||||||||| Sbjct: 113833 tctcctcgtgaagtgtctggaatgagcgaaggaagcctcaatgagcagaatgatcaatct 113892 Query: 314 ggtt 317 |||| Sbjct: 113893 ggtt 113896 Score = 73.8 bits (37), Expect = 7e-10 Identities = 76/89 (85%) Strand = Plus / Plus Query: 552 catatcatacccatatgctgatccttactatggtggtgcggtggcagcttatggcacgca 611 ||||||||| |||||||||||| | | |||||||||||| || || |||||||||| || Sbjct: 114255 catatcatatccatatgctgattcgttctatggtggtgctgtagcgacttatggcacaca 114314 Query: 612 tgctattgtgagtgatatttatgctatcc 640 ||||||||| ||||| ||| |||||||| Sbjct: 114315 tgctattgtaagtgacctttgtgctatcc 114343 Score = 69.9 bits (35), Expect = 1e-08 Identities = 56/63 (88%) Strand = Plus / Plus Query: 186 cagaaaatggcacaatcatgattcagtttggtcagcaagtgcctaattacgagtcatcag 245 |||||||||||||| | ||||||||||||||||| || ||||| | ||||||||||||| Sbjct: 113753 cagaaaatggcacagtaatgattcagtttggtcataaaatgcctgactacgagtcatcag 113812 Query: 246 cta 248 ||| Sbjct: 113813 cta 113815
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 131 bits (66), Expect = 3e-27 Identities = 81/86 (94%) Strand = Plus / Minus Query: 424 gtactaatactaggtaatcgtgatggttacacgaagagtgatgaaggcaagatgatgtcg 483 |||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||| Sbjct: 3985441 gtactaatgctaggtaatcttgatggttacacgaagagtgatgaaggtaagatgatgtca 3985382 Query: 484 gctttatctctgggcaattcagaaac 509 ||||||||||||||||| |||||||| Sbjct: 3985381 gctttatctctgggcaaatcagaaac 3985356 Score = 95.6 bits (48), Expect = 2e-16 Identities = 60/64 (93%) Strand = Plus / Minus Query: 254 tctcctcgagaagtgtccggaatgagcgaaggaagctttaatgagcagaatgatcaatct 313 |||||||| |||||||| |||||||||||||||||| | ||||||||||||||||||||| Sbjct: 3985646 tctcctcgtgaagtgtctggaatgagcgaaggaagcctcaatgagcagaatgatcaatct 3985587 Query: 314 ggtt 317 |||| Sbjct: 3985586 ggtt 3985583 Score = 73.8 bits (37), Expect = 7e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 552 catatcatacccatatgctgatccttactatggtggtgcggtggcagcttatggcacgca 611 ||||||||| |||||||||||| | | |||||||||||| || || |||||||||| || Sbjct: 3985224 catatcatatccatatgctgattcgttctatggtggtgctgtagcgacttatggcacaca 3985165 Query: 612 tgctattgtgagtgatatttatgctatcc 640 ||||||||| ||||| ||| |||||||| Sbjct: 3985164 tgctattgtaagtgacctttgtgctatcc 3985136 Score = 69.9 bits (35), Expect = 1e-08 Identities = 56/63 (88%) Strand = Plus / Minus Query: 186 cagaaaatggcacaatcatgattcagtttggtcagcaagtgcctaattacgagtcatcag 245 |||||||||||||| | ||||||||||||||||| || ||||| | ||||||||||||| Sbjct: 3985726 cagaaaatggcacagtaatgattcagtttggtcataaaatgcctgactacgagtcatcag 3985667 Query: 246 cta 248 ||| Sbjct: 3985666 cta 3985664 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 403 ttctccatttgtttcctctt 422 |||||||||||||||||||| Sbjct: 18230866 ttctccatttgtttcctctt 18230885
>gb|BT016638.1| Zea mays clone Contig471 mRNA sequence Length = 1267 Score = 111 bits (56), Expect = 3e-21 Identities = 150/180 (83%), Gaps = 6/180 (3%) Strand = Plus / Plus Query: 444 tgatggttacacgaagagtgatgaaggcaagatgatgtcggctttatctctgggcaattc 503 |||||| ||| |||||||||| ||| |||||||||||| || ||||| ||||||||| | Sbjct: 350 tgatgggtactcgaagagtgacgaaaacaagatgatgtcagcgttatccctgggcaatcc 409 Query: 504 agaaacagcgtacacaccg---ccaaaacctgaccgcactcatcccttcgccatatcata 560 |||||||| ||| ||| || || |||||||| ||||| |||||||||||||||| Sbjct: 410 ggaaacagcttacgcacataatccgaagcctgaccgtactcagtccttcgccatatcata 469 Query: 561 cccatatgctgatccttactatggtggtgcggtg---gcagcttatggcacgcatgctat 617 ||||||||| ||||| ||||| ||||| |||||| |||||||||||| |||||||||| Sbjct: 470 cccatatgccgatccatactacggtggcgcggtggcagcagcttatggcccgcatgctat 529
>gb|AY109469.1| Zea mays CL724_1 mRNA sequence Length = 1303 Score = 111 bits (56), Expect = 3e-21 Identities = 150/180 (83%), Gaps = 6/180 (3%) Strand = Plus / Plus Query: 444 tgatggttacacgaagagtgatgaaggcaagatgatgtcggctttatctctgggcaattc 503 |||||| ||| |||||||||| ||| |||||||||||| || ||||| ||||||||| | Sbjct: 350 tgatgggtactcgaagagtgacgaaaacaagatgatgtcagcgttatccctgggcaatcc 409 Query: 504 agaaacagcgtacacaccg---ccaaaacctgaccgcactcatcccttcgccatatcata 560 |||||||| ||| ||| || || |||||||| ||||| |||||||||||||||| Sbjct: 410 ggaaacagcttacgcacataatccgaagcctgaccgtactcagtccttcgccatatcata 469 Query: 561 cccatatgctgatccttactatggtggtgcggtg---gcagcttatggcacgcatgctat 617 ||||||||| ||||| ||||| ||||| |||||| |||||||||||| |||||||||| Sbjct: 470 cccatatgccgatccatactacggtggcgcggtggcagcagcttatggcccgcatgctat 529
>gb|AE014825.1| Plasmodium falciparum 3D7 chromosome 14 section 10 of 13 of the complete sequence Length = 250053 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 286 aagctttaatgagcagaatgat 307 |||||||||||||||||||||| Sbjct: 4316 aagctttaatgagcagaatgat 4337
>gb|AC114555.7| Mus musculus chromosome 5, clone RP23-431C18, complete sequence Length = 162394 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 290 tttaatgagcagaatgatcaa 310 ||||||||||||||||||||| Sbjct: 100253 tttaatgagcagaatgatcaa 100273
>emb|AL596210.20| Human DNA sequence from clone RP11-92O17 on chromosome 1 Contains part of the CAMTA1 gene for calmodulin binding transcription activator 1, complete sequence Length = 107112 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 373 ccatctctcctgaaaataaagaatt 397 |||||||||||||||||| |||||| Sbjct: 69941 ccatctctcctgaaaatacagaatt 69917
>emb|AL359693.11| Human DNA sequence from clone RP11-244G12 on chromosome 6, complete sequence Length = 149696 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 ttgaactgaaagcagagtaga 35 ||||||||||||||||||||| Sbjct: 74324 ttgaactgaaagcagagtaga 74344
>gb|AC092498.8| Mus musculus strain C57BL/6J chromosome 9 clone rp23-21l18, complete sequence Length = 233208 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 402 attctccatttgtttcctctt 422 ||||||||||||||||||||| Sbjct: 98317 attctccatttgtttcctctt 98337
>emb|AL606490.14| Human DNA sequence from clone RP11-344N17 on chromosome X Contains the 3'end of the SSX1 gene for synovial sarcoma X breakpoint 1, two S100 calcium binding protein A11 (calgizzarin) (S100A11) pseudogenes, a synovial sarcoma X breakpoint pseudogene, four ornithine aminotransferase (gyrate atrophy)(OAT) pseudogenes, the SSX9 gene for synovial sarcoma X breakpoint 9, a synovial sarcoma X breakpoint 4 pseudogene (psiSSX4), the SSX3 gene for synovial sarcoma X breakpoint 3, a novel gene, the SSX4 gene for synovial sarcoma X breakpoint 4 and the 3' end of a novel gene similar to synovial sarcoma X breakpoint 4, complete sequence Length = 141676 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 369 aataccatctctcctgaaaataaagaatt 397 |||||||||||| ||||||||||| |||| Sbjct: 17823 aataccatctctactgaaaataaaaaatt 17795
>gb|AC147560.3| Mus musculus BAC clone RP23-451A8 from 9, complete sequence Length = 177220 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 402 attctccatttgtttcctctt 422 ||||||||||||||||||||| Sbjct: 83682 attctccatttgtttcctctt 83702
>ref|NM_125430.2| Arabidopsis thaliana unknown protein AT5G60370 mRNA, complete cds Length = 1535 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 398 gaacattctccatttgtttc 417 |||||||||||||||||||| Sbjct: 429 gaacattctccatttgtttc 410
>ref|NM_104032.2| Arabidopsis thaliana unknown protein AT1G51540 mRNA, complete cds Length = 3796 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 acatcttttgtgttcctctg 184 |||||||||||||||||||| Sbjct: 3262 acatcttttgtgttcctctg 3281
>ref|NM_104033.3| Arabidopsis thaliana ubiquitin-protein ligase AT1G51550 mRNA, complete cds Length = 1673 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 acatcttttgtgttcctctg 184 |||||||||||||||||||| Sbjct: 1567 acatcttttgtgttcctctg 1548
>gb|AC166369.5| Mus musculus BAC clone RP23-45A11 from chromosome 14, complete sequence Length = 226970 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 373 ccatctctcctgaaaataaa 392 |||||||||||||||||||| Sbjct: 208733 ccatctctcctgaaaataaa 208714
>gb|AC147803.2| Oryza sativa chromosome 3 BAC OSJNBb0034P05 genomic sequence, complete sequence Length = 35334 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 403 ttctccatttgtttcctctt 422 |||||||||||||||||||| Sbjct: 21712 ttctccatttgtttcctctt 21731
>gb|AC154627.2| Mus musculus BAC clone RP23-312J2 from chromosome 14, complete sequence Length = 225640 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 373 ccatctctcctgaaaataaa 392 |||||||||||||||||||| Sbjct: 121501 ccatctctcctgaaaataaa 121482
>gb|AC106887.3| Oryza sativa chromosome 3 BAC OSJNBa0054H04 genomic sequence, complete sequence Length = 159579 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 403 ttctccatttgtttcctctt 422 |||||||||||||||||||| Sbjct: 3756 ttctccatttgtttcctctt 3775
>gb|AC125340.3| Mus musculus BAC clone RP24-364H15 from chromosome 1, complete sequence Length = 177161 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 tgcatatgtgatgtatatac 134 |||||||||||||||||||| Sbjct: 96088 tgcatatgtgatgtatatac 96069
>gb|BC043776.1| Xenopus laevis 1-acylglycerol-3-phosphate O-acyltransferase 3, mRNA (cDNA clone MGC:52981 IMAGE:4930744), complete cds Length = 3509 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 tgaactgaaagcagagtaga 35 |||||||||||||||||||| Sbjct: 3428 tgaactgaaagcagagtaga 3409
>emb|AL139320.18| Human DNA sequence from clone RP11-154C3 on chromosome 13 Contains a cytochrome c oxidase subunit IV pseudogene, a novel gene, an aldo-keto reductase family 1, member B10 (aldose reductase) (AKR1B10) pseudogene, a novel gene, similar to RIKEN cDNA 1700086N05 and CpG island, complete sequence Length = 112107 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 aatggcacaatcatgattca 210 |||||||||||||||||||| Sbjct: 42420 aatggcacaatcatgattca 42401
>emb|AL109802.6|HSBA163M1 Human DNA sequence from clone RP11-163M1 on chromosome 22 Contains part of the gene for homolog of yeast Sfi1 (SFI1), complete sequence Length = 33397 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 gcccatgagatgagacgcaa 56 |||||||||||||||||||| Sbjct: 9126 gcccatgagatgagacgcaa 9107
>gb|AY142558.1| Arabidopsis thaliana unknown protein (At5g60370) mRNA, complete cds Length = 1273 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 398 gaacattctccatttgtttc 417 |||||||||||||||||||| Sbjct: 409 gaacattctccatttgtttc 390
>gb|AY072102.1| Arabidopsis thaliana unknown protein (At5g60370) mRNA, complete cds Length = 1553 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 398 gaacattctccatttgtttc 417 |||||||||||||||||||| Sbjct: 431 gaacattctccatttgtttc 412
>emb|CR556697.5| Mouse DNA sequence from clone RP24-406I24 on chromosome X, complete sequence Length = 180845 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 aaagcagagtagaagcccat 42 |||||||||||||||||||| Sbjct: 128862 aaagcagagtagaagcccat 128843
>gb|AY445925.1| Ctenopharyngodon idella chaperone protein GP96 mRNA, partial cds Length = 319 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 gaaagcagagtagaagccca 41 |||||||||||||||||||| Sbjct: 117 gaaagcagagtagaagccca 98
>ref|NM_164354.1| Drosophila melanogaster CG31973-RB, transcript variant B (CG31973), mRNA Length = 9621 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 gcagaatgatcaatctggtt 317 |||||||||||||||||||| Sbjct: 2027 gcagaatgatcaatctggtt 2008
>gb|AC084809.17| Homo sapiens chromosome 17, clone CTD-2338C18, complete sequence Length = 113349 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 aatggcacaatcatgattca 210 |||||||||||||||||||| Sbjct: 26086 aatggcacaatcatgattca 26067
>gb|AC008318.7|AC008318 Drosophila melanogaster, chromosome 2L, region 21A-21A, BAC clone BACR09J20, complete sequence Length = 166626 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 gcagaatgatcaatctggtt 317 |||||||||||||||||||| Sbjct: 27690 gcagaatgatcaatctggtt 27709
>emb|BX815315.1|CNS0ACZE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS51ZB09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1622 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 acatcttttgtgttcctctg 184 |||||||||||||||||||| Sbjct: 1516 acatcttttgtgttcctctg 1497
>emb|BX816543.1|CNS0ADA6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH54ZE09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1591 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 acatcttttgtgttcctctg 184 |||||||||||||||||||| Sbjct: 1540 acatcttttgtgttcctctg 1521
>emb|BX815102.1|CNS0ACX3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS32ZF11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1588 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 acatcttttgtgttcctctg 184 |||||||||||||||||||| Sbjct: 1543 acatcttttgtgttcctctg 1524
>gb|AC079340.8| Homo sapiens BAC clone RP11-18H21 from 4, complete sequence Length = 186836 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 gacagaaaatggcacaatca 203 |||||||||||||||||||| Sbjct: 90968 gacagaaaatggcacaatca 90949
>gb|AC024261.6|AC024261 Arabidopsis thaliana chromosome 1 BAC F5D21 genomic sequence, complete sequence Length = 92652 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 acatcttttgtgttcctctg 184 |||||||||||||||||||| Sbjct: 23215 acatcttttgtgttcctctg 23196
>gb|AC084464.1|AC084464 Caenorhabditis briggsae cosmid CB038P16, complete sequence Length = 99890 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 647 tttcactagtttcgcctactctct 670 ||||||||||||||||| |||||| Sbjct: 53211 tttcactagtttcgccttctctct 53234
>gb|AF003529.2| Homo sapiens glypican 3 (GPC3) gene, partial cds and flanking repeat regions Length = 165658 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 aatggcacaatcatgattca 210 |||||||||||||||||||| Sbjct: 68310 aatggcacaatcatgattca 68291
>ref|XM_216180.2| PREDICTED: Rattus norvegicus chaperonin subunit 7 (eta) (predicted) (Cct7_predicted), mRNA Length = 2275 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 agcttgaactgaaagcagag 31 |||||||||||||||||||| Sbjct: 1169 agcttgaactgaaagcagag 1188
>gb|AC067962.6| Homo sapiens BAC clone RP11-48K7 from 2, complete sequence Length = 73565 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 tctccatttgtttcctcttc 423 |||||||||||||||||||| Sbjct: 17797 tctccatttgtttcctcttc 17816
>dbj|AK176898.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL25-46-A12 Length = 1545 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 398 gaacattctccatttgtttc 417 |||||||||||||||||||| Sbjct: 429 gaacattctccatttgtttc 410
>dbj|AK175444.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL21-87-G08 Length = 1545 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 398 gaacattctccatttgtttc 417 |||||||||||||||||||| Sbjct: 429 gaacattctccatttgtttc 410
>dbj|AB011483.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUF9 Length = 77298 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 398 gaacattctccatttgtttc 417 |||||||||||||||||||| Sbjct: 3855 gaacattctccatttgtttc 3836
>gb|AE003590.3| Drosophila melanogaster chromosome 2L, section 1 of 83 of the complete sequence Length = 305900 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 gcagaatgatcaatctggtt 317 |||||||||||||||||||| Sbjct: 37048 gcagaatgatcaatctggtt 37067
>gb|AC161764.4| Mus musculus BAC clone RP23-193D1 from chromosome 14, complete sequence Length = 215230 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 168 tcttttgtgttcctctgaca 187 |||||||||||||||||||| Sbjct: 74515 tcttttgtgttcctctgaca 74496
>dbj|AK116199.1| Ciona intestinalis cDNA, clone:citb015c13, full insert sequence Length = 1252 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 403 ttctccatttgtttcctcttcgta 426 |||||||||| ||||||||||||| Sbjct: 193 ttctccatttatttcctcttcgta 170
>gb|AC005265.1|AC005265 Homo sapiens chromosome 19, cosmid F19750, complete sequence Length = 43900 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 aatggcacaatcatgattca 210 |||||||||||||||||||| Sbjct: 9438 aatggcacaatcatgattca 9419
>gb|M64612.1|HYDTYRKINB Hydra vulgaris protein-tyrosine kinase (HTK7) mRNA, complete cds Length = 4897 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 443 gtgatggttacacgaagagtgatg 466 ||||||||||||||||| |||||| Sbjct: 4144 gtgatggttacacgaagggtgatg 4167 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,209,936 Number of Sequences: 3902068 Number of extensions: 6209936 Number of successful extensions: 112936 Number of sequences better than 10.0: 63 Number of HSP's better than 10.0 without gapping: 65 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 112622 Number of HSP's gapped (non-prelim): 299 length of query: 678 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 655 effective length of database: 17,143,297,704 effective search space: 11228859996120 effective search space used: 11228859996120 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)