>ref|XM_477400.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2122

 Score = 61.9 bits (31), Expect = 4e-07
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                      
Query: 1   atccactccaaggttatgggcacgataggcaatgtcatcaactcaattgatccaaagtc 59
           ||||| ||||||||| |||||||||||||  |||| || |||||| |||||||||||||
Sbjct: 432 atccaatccaaggttttgggcacgataggggatgtgatgaactcatttgatccaaagtc 490

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 61.9 bits (31), Expect = 4e-07
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                           
Query: 1        atccactccaaggttatgggcacgataggcaatgtcatcaactcaattgatccaaagtc 59
                ||||| ||||||||| |||||||||||||  |||| || |||||| |||||||||||||
Sbjct: 10097119 atccaatccaaggttttgggcacgataggggatgtgatgaactcatttgatccaaagtc 10097177

>dbj|AP005172.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0002J01
          Length = 130152

 Score = 61.9 bits (31), Expect = 4e-07
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                        
Query: 1     atccactccaaggttatgggcacgataggcaatgtcatcaactcaattgatccaaagtc 59
             ||||| ||||||||| |||||||||||||  |||| || |||||| |||||||||||||
Sbjct: 69795 atccaatccaaggttttgggcacgataggggatgtgatgaactcatttgatccaaagtc 69853

>dbj|AK102876.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033112D24, full
           insert sequence
          Length = 2122

 Score = 61.9 bits (31), Expect = 4e-07
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                      
Query: 1   atccactccaaggttatgggcacgataggcaatgtcatcaactcaattgatccaaagtc 59
           ||||| ||||||||| |||||||||||||  |||| || |||||| |||||||||||||
Sbjct: 432 atccaatccaaggttttgggcacgataggggatgtgatgaactcatttgatccaaagtc 490

>emb|AL135933.11| Human DNA sequence from clone RP4-774E4 on chromosome 11p13-14.2
             Contains a pseudogene similar to ribosomal protein L7a,
             STSs and GSSs, complete sequence
          Length = 111135

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 76    tgggaaacagctggaaatgc 95
             ||||||||||||||||||||
Sbjct: 56189 tgggaaacagctggaaatgc 56170

>gb|AC079059.10| Homo sapiens chromosome 18, clone RP11-281L12, complete sequence
          Length = 145993

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 68    agcaagcatgggaaacagctggaa 91
             |||||| |||||||||||||||||
Sbjct: 65659 agcaaggatgggaaacagctggaa 65682

>gb|AC068388.7| Homo sapiens chromosome 3, clone RP11-296M9, complete sequence
          Length = 148372

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 76    tgggaaacagctggaaatgc 95
             ||||||||||||||||||||
Sbjct: 83900 tgggaaacagctggaaatgc 83881

>gb|AC021594.9| Homo sapiens, clone RP11-154H12, complete sequence
          Length = 162336

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 68    agcaagcatgggaaacagctggaa 91
             |||||| |||||||||||||||||
Sbjct: 73289 agcaaggatgggaaacagctggaa 73312

>ref|XM_760663.1| Theileria parva strain Muguga chromosome 1 ubiquitin-protein ligase
            (TP01_0229) partial mRNA
          Length = 12495

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 38   tcaactcaattgatccaaa 56
            |||||||||||||||||||
Sbjct: 9125 tcaactcaattgatccaaa 9143

>gb|AC010216.8| Homo sapiens chromosome 5 clone CTC-202F10, complete sequence
          Length = 110753

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 67    cagcaagcatgggaaacag 85
             |||||||||||||||||||
Sbjct: 51062 cagcaagcatgggaaacag 51080

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 16       atgggcacgataggcaatg 34
                |||||||||||||||||||
Sbjct: 13240993 atgggcacgataggcaatg 13241011

>gb|AC150263.4| Aedes aegypti, clone XX-44H3, complete sequence
          Length = 131682

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 64    cctcagcaagcatgggaaa 82
             |||||||||||||||||||
Sbjct: 42335 cctcagcaagcatgggaaa 42317

>gb|AE005672.2| Streptococcus pneumoniae TIGR4, complete genome
          Length = 2160842

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 103     tcccttgagtcaaagttat 121
               |||||||||||||||||||
Sbjct: 1242320 tcccttgagtcaaagttat 1242338

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 16       atgggcacgataggcaatg 34
                |||||||||||||||||||
Sbjct: 13195267 atgggcacgataggcaatg 13195285

>emb|AL732381.3|CNS08C94 Oryza sativa chromosome 12, . BAC OJ1112_F01 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 193499

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 16    atgggcacgataggcaatg 34
             |||||||||||||||||||
Sbjct: 89750 atgggcacgataggcaatg 89732


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 846,513
Number of Sequences: 3902068
Number of extensions: 846513
Number of successful extensions: 61014
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 60901
Number of HSP's gapped (non-prelim): 113
length of query: 136
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 115
effective length of database: 17,151,101,840
effective search space: 1972376711600
effective search space used: 1972376711600
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)