ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal38k22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK069141.1| Oryza sativa (japonica cultivar-group) cDNA clon... 515 e-143
2dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 117 4e-23
3dbj|AP003543.3| Oryza sativa (japonica cultivar-group) genomic D... 117 4e-23
4dbj|AP003507.2| Oryza sativa (japonica cultivar-group) genomic D... 117 4e-23
5gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 44 0.52
6gb|AC165171.2| Zea mays clone CH201-145P10, complete sequence 44 0.52
7dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.52
8gb|AC134240.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.52
9gb|AC104215.11| Mus musculus chromosome 7, clone RP23-44I18, com... 42 2.0
10ref|XM_610035.2| PREDICTED: Bos taurus similar to Liprin-alpha 4... 42 2.0
11gb|AC116683.7| Mus musculus chromosome 7, clone RP24-472H13, com... 42 2.0
12gb|BT013662.1| Lycopersicon esculentum clone 132481F, mRNA sequence 40 8.1
13gb|AC134879.3| Homo sapiens BAC clone RP11-295P22 from Y, comple... 40 8.1
14ref|XM_917520.2| PREDICTED: Mus musculus similar to Spectrin bet... 40 8.1
15emb|AL033524.11|HS1090E8 Human DNA sequence from clone RP5-1090E... 40 8.1
16emb|CR812469.6| Zebrafish DNA sequence from clone DKEY-286F3 in ... 40 8.1
17dbj|AB246912.1| Hemerocallis fulva x Hemerocallis citrina DNA, m... 40 8.1
18gb|AC084212.17| Homo sapiens 3 BAC RP11-109B8 (Roswell Park Canc... 40 8.1
19gb|AC015476.10| Homo sapiens, clone RP11-16G11, complete sequence 40 8.1
20gb|AC104233.2| Homo sapiens chromosome 8, clone RP11-3G20, compl... 40 8.1
21gb|AY530950.1| Zea mays putative zinc finger protein (Z438D03.1)... 40 8.1
22gb|AC122017.5| Mus musculus BAC clone RP24-361J4 from 7, complet... 40 8.1
23emb|AL833774.4| Mouse DNA sequence from clone RP23-383I16 on chr... 40 8.1
24dbj|AP005360.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 8.1

>dbj|AK069141.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008K20, full
           insert sequence
          Length = 1951

 Score =  515 bits (260), Expect = e-143
 Identities = 477/548 (87%), Gaps = 1/548 (0%)
 Strand = Plus / Plus

                                                                       
Query: 2   gggtgcagaggacgctggtggaggcatgggggctgatccgtgagaccttcgtagacccca 61
           ||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||
Sbjct: 346 gggtgcagaggacgctggtggaggcgtgggggctgatccgtgagaccttcgtggatccca 405

                                                                       
Query: 62  ccttcaaccaccaagactgggaccagaaacttcagcagacgatggtggagatgttcccgc 121
           ||||||| |||||||| ||||||  || ||| |||||||| |||||||||||||||||||
Sbjct: 406 ccttcaatcaccaagattgggacatgagactgcagcagaccatggtggagatgttcccgc 465

                                                                       
Query: 122 tgaaatcggcagacgccgcctacggcaagatcagcgggatggtgtccacgctaggggacc 181
           |||||||||  || |||||||| || ||||||||||||||| ||||||| || || || |
Sbjct: 466 tgaaatcggaggatgccgcctatggtaagatcagcgggatgctgtccacactcggcgatc 525

                                                                       
Query: 182 ctttcacaaagatcatcacccccaaggaatatcatgagtttcaagatcggaagcgatggg 241
           | ||||| |||||||||| ||||||||||||||| |||||||| ||| ||||||||||||
Sbjct: 526 cgttcaccaagatcatcagccccaaggaatatca-gagtttcaggattggaagcgatggg 584

                                                                       
Query: 242 aatttgcaaggggttggcatattcataaatagggaccctgccaccggacgcttgcttgtt 301
           | | | |||||||||||  | |||||||| | ||| |||  | | |||||||||||||||
Sbjct: 585 agtgtccaaggggttggggtgttcataaacaaggagcctagctctggacgcttgcttgtt 644

                                                                       
Query: 302 atgaactgcattgacggaggcccagccgacagagcaggcatacacgaaggcgatgagcta 361
           ||| |||||||||| || |||||||| ||  |||||||| | || | ||||||||| |||
Sbjct: 645 atggactgcattgaaggtggcccagcagatcgagcaggcctgcatggaggcgatgaacta 704

                                                                       
Query: 362 gttgagatcaatgggaatagtgttttagggttggacgtagaagctgtggctcagagactt 421
           ||||||||| ||||||| |||||||  |||||||| | ||||||||  ||||||||||||
Sbjct: 705 gttgagatcgatgggaagagtgtttctgggttggatggagaagctgcagctcagagactt 764

                                                                       
Query: 422 agaggtcgtgctggaacgactgtggaagtgaaactgttggatggtactggaattgaaagg 481
           |||||||||| |||||| |||||| |||||||| |||||||||| |||| ||  ||||||
Sbjct: 765 agaggtcgtgttggaacaactgtgaaagtgaaagtgttggatggcactgaaaacgaaagg 824

                                                                       
Query: 482 agtggtaggataaagcaaaaagaggtccagctatctcgtgaggtaatcaatctttcacct 541
           | |||||||||||  ||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 825 aatggtaggataagacaaaaggaggtccagctatctcgtgaggttatcaatctttcacct 884

                   
Query: 542 ctatcaac 549
           ||||||||
Sbjct: 885 ctatcaac 892



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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  117 bits (59), Expect = 4e-23
 Identities = 101/115 (87%)
 Strand = Plus / Plus

                                                                            
Query: 94       cagcagacgatggtggagatgttcccgctgaaatcggcagacgccgcctacggcaagatc 153
                |||||||| ||||||||||||||||||||||||||||  || |||||||| || ||||||
Sbjct: 12189414 cagcagaccatggtggagatgttcccgctgaaatcggaggatgccgcctatggtaagatc 12189473

                                                                       
Query: 154      agcgggatggtgtccacgctaggggaccctttcacaaagatcatcacccccaagg 208
                ||||||||| ||||||| || || || || ||||| |||||||||| ||||||||
Sbjct: 12189474 agcgggatgctgtccacactcggcgatccgttcaccaagatcatcagccccaagg 12189528



 Score =  117 bits (59), Expect = 4e-23
 Identities = 71/75 (94%)
 Strand = Plus / Plus

                                                                            
Query: 2        gggtgcagaggacgctggtggaggcatgggggctgatccgtgagaccttcgtagacccca 61
                ||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||
Sbjct: 12189198 gggtgcagaggacgctggtggaggcgtgggggctgatccgtgagaccttcgtggatccca 12189257

                               
Query: 62       ccttcaaccaccaag 76
                ||||||| |||||||
Sbjct: 12189258 ccttcaatcaccaag 12189272



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 80/91 (87%)
 Strand = Plus / Plus

                                                                            
Query: 374      gggaatagtgttttagggttggacgtagaagctgtggctcagagacttagaggtcgtgct 433
                ||||| |||||||  |||||||| | ||||||||  |||||||||||||||||||||| |
Sbjct: 12190519 gggaagagtgtttctgggttggatggagaagctgcagctcagagacttagaggtcgtgtt 12190578

                                               
Query: 434      ggaacgactgtggaagtgaaactgttggatg 464
                ||||| |||||| |||||||| |||||||||
Sbjct: 12190579 ggaacaactgtgaaagtgaaagtgttggatg 12190609



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 45/46 (97%)
 Strand = Plus / Plus

                                                              
Query: 504      aggtccagctatctcgtgaggtaatcaatctttcacctctatcaac 549
                |||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 12191028 aggtccagctatctcgtgaggttatcaatctttcacctctatcaac 12191073



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 69/81 (85%)
 Strand = Plus / Plus

                                                                            
Query: 295      gcttgttatgaactgcattgacggaggcccagccgacagagcaggcatacacgaaggcga 354
                |||||||||| |||||||||| || |||||||| ||  |||||||| | || | ||||||
Sbjct: 12189793 gcttgttatggactgcattgaaggtggcccagcagatcgagcaggcctgcatggaggcga 12189852

                                     
Query: 355      tgagctagttgagatcaatgg 375
                ||| |||||||||||| ||||
Sbjct: 12189853 tgaactagttgagatcgatgg 12189873



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 47/53 (88%), Gaps = 1/53 (1%)
 Strand = Plus / Plus

                                                                     
Query: 206      aggaatatcatgagtttcaagatcggaagcgatgggaatttgcaaggggttgg 258
                |||||||||| |||||||| ||| ||||||||||||| | | |||||||||||
Sbjct: 12189624 aggaatatca-gagtttcaggattggaagcgatgggagtgtccaaggggttgg 12189675



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>dbj|AP003543.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0592B08
          Length = 131096

 Score =  117 bits (59), Expect = 4e-23
 Identities = 101/115 (87%)
 Strand = Plus / Plus

                                                                         
Query: 94    cagcagacgatggtggagatgttcccgctgaaatcggcagacgccgcctacggcaagatc 153
             |||||||| ||||||||||||||||||||||||||||  || |||||||| || ||||||
Sbjct: 26436 cagcagaccatggtggagatgttcccgctgaaatcggaggatgccgcctatggtaagatc 26495

                                                                    
Query: 154   agcgggatggtgtccacgctaggggaccctttcacaaagatcatcacccccaagg 208
             ||||||||| ||||||| || || || || ||||| |||||||||| ||||||||
Sbjct: 26496 agcgggatgctgtccacactcggcgatccgttcaccaagatcatcagccccaagg 26550



 Score =  117 bits (59), Expect = 4e-23
 Identities = 71/75 (94%)
 Strand = Plus / Plus

                                                                         
Query: 2     gggtgcagaggacgctggtggaggcatgggggctgatccgtgagaccttcgtagacccca 61
             ||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||
Sbjct: 26220 gggtgcagaggacgctggtggaggcgtgggggctgatccgtgagaccttcgtggatccca 26279

                            
Query: 62    ccttcaaccaccaag 76
             ||||||| |||||||
Sbjct: 26280 ccttcaatcaccaag 26294



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 80/91 (87%)
 Strand = Plus / Plus

                                                                         
Query: 374   gggaatagtgttttagggttggacgtagaagctgtggctcagagacttagaggtcgtgct 433
             ||||| |||||||  |||||||| | ||||||||  |||||||||||||||||||||| |
Sbjct: 27541 gggaagagtgtttctgggttggatggagaagctgcagctcagagacttagaggtcgtgtt 27600

                                            
Query: 434   ggaacgactgtggaagtgaaactgttggatg 464
             ||||| |||||| |||||||| |||||||||
Sbjct: 27601 ggaacaactgtgaaagtgaaagtgttggatg 27631



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 45/46 (97%)
 Strand = Plus / Plus

                                                           
Query: 504   aggtccagctatctcgtgaggtaatcaatctttcacctctatcaac 549
             |||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 28050 aggtccagctatctcgtgaggttatcaatctttcacctctatcaac 28095



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 69/81 (85%)
 Strand = Plus / Plus

                                                                         
Query: 295   gcttgttatgaactgcattgacggaggcccagccgacagagcaggcatacacgaaggcga 354
             |||||||||| |||||||||| || |||||||| ||  |||||||| | || | ||||||
Sbjct: 26815 gcttgttatggactgcattgaaggtggcccagcagatcgagcaggcctgcatggaggcga 26874

                                  
Query: 355   tgagctagttgagatcaatgg 375
             ||| |||||||||||| ||||
Sbjct: 26875 tgaactagttgagatcgatgg 26895



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 47/53 (88%), Gaps = 1/53 (1%)
 Strand = Plus / Plus

                                                                  
Query: 206   aggaatatcatgagtttcaagatcggaagcgatgggaatttgcaaggggttgg 258
             |||||||||| |||||||| ||| ||||||||||||| | | |||||||||||
Sbjct: 26646 aggaatatca-gagtttcaggattggaagcgatgggagtgtccaaggggttgg 26697



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>dbj|AP003507.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0468A12
          Length = 143018

 Score =  117 bits (59), Expect = 4e-23
 Identities = 101/115 (87%)
 Strand = Plus / Plus

                                                                          
Query: 94     cagcagacgatggtggagatgttcccgctgaaatcggcagacgccgcctacggcaagatc 153
              |||||||| ||||||||||||||||||||||||||||  || |||||||| || ||||||
Sbjct: 132203 cagcagaccatggtggagatgttcccgctgaaatcggaggatgccgcctatggtaagatc 132262

                                                                     
Query: 154    agcgggatggtgtccacgctaggggaccctttcacaaagatcatcacccccaagg 208
              ||||||||| ||||||| || || || || ||||| |||||||||| ||||||||
Sbjct: 132263 agcgggatgctgtccacactcggcgatccgttcaccaagatcatcagccccaagg 132317



 Score =  117 bits (59), Expect = 4e-23
 Identities = 71/75 (94%)
 Strand = Plus / Plus

                                                                          
Query: 2      gggtgcagaggacgctggtggaggcatgggggctgatccgtgagaccttcgtagacccca 61
              ||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||
Sbjct: 131987 gggtgcagaggacgctggtggaggcgtgggggctgatccgtgagaccttcgtggatccca 132046

                             
Query: 62     ccttcaaccaccaag 76
              ||||||| |||||||
Sbjct: 132047 ccttcaatcaccaag 132061



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 80/91 (87%)
 Strand = Plus / Plus

                                                                          
Query: 374    gggaatagtgttttagggttggacgtagaagctgtggctcagagacttagaggtcgtgct 433
              ||||| |||||||  |||||||| | ||||||||  |||||||||||||||||||||| |
Sbjct: 133308 gggaagagtgtttctgggttggatggagaagctgcagctcagagacttagaggtcgtgtt 133367

                                             
Query: 434    ggaacgactgtggaagtgaaactgttggatg 464
              ||||| |||||| |||||||| |||||||||
Sbjct: 133368 ggaacaactgtgaaagtgaaagtgttggatg 133398



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 45/46 (97%)
 Strand = Plus / Plus

                                                            
Query: 504    aggtccagctatctcgtgaggtaatcaatctttcacctctatcaac 549
              |||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 133817 aggtccagctatctcgtgaggttatcaatctttcacctctatcaac 133862



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 69/81 (85%)
 Strand = Plus / Plus

                                                                          
Query: 295    gcttgttatgaactgcattgacggaggcccagccgacagagcaggcatacacgaaggcga 354
              |||||||||| |||||||||| || |||||||| ||  |||||||| | || | ||||||
Sbjct: 132582 gcttgttatggactgcattgaaggtggcccagcagatcgagcaggcctgcatggaggcga 132641

                                   
Query: 355    tgagctagttgagatcaatgg 375
              ||| |||||||||||| ||||
Sbjct: 132642 tgaactagttgagatcgatgg 132662



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 47/53 (88%), Gaps = 1/53 (1%)
 Strand = Plus / Plus

                                                                   
Query: 206    aggaatatcatgagtttcaagatcggaagcgatgggaatttgcaaggggttgg 258
              |||||||||| |||||||| ||| ||||||||||||| | | |||||||||||
Sbjct: 132413 aggaatatca-gagtttcaggattggaagcgatgggagtgtccaaggggttgg 132464



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 6       gcagaggacgctggtggaggca 27
               ||||||||||||||||||||||
Sbjct: 7982644 gcagaggacgctggtggaggca 7982623



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>gb|AC165171.2| Zea mays clone CH201-145P10, complete sequence
          Length = 233369

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 93     tcagcagacgatggtggagatgttcc 118
              |||||||| |||||||||||||||||
Sbjct: 100549 tcagcagaggatggtggagatgttcc 100574



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 6       gcagaggacgctggtggaggca 27
               ||||||||||||||||||||||
Sbjct: 7980479 gcagaggacgctggtggaggca 7980458



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>gb|AC134240.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0081I10, complete sequence
          Length = 143298

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 6     gcagaggacgctggtggaggca 27
             ||||||||||||||||||||||
Sbjct: 50007 gcagaggacgctggtggaggca 49986



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>gb|AC104215.11| Mus musculus chromosome 7, clone RP23-44I18, complete sequence
          Length = 235147

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 354  atgagctagttgagatcaatg 374
            |||||||||||||||||||||
Sbjct: 4523 atgagctagttgagatcaatg 4503



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>ref|XM_610035.2| PREDICTED: Bos taurus similar to Liprin-alpha 4 (Protein tyrosine
            phosphatase receptor type f polypeptide-interacting
            protein alpha 4) (PTPRF-interacting protein alpha 4)
            (LOC531537), mRNA
          Length = 1713

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 85   cagaaacttcagcagacgatg 105
            |||||||||||||||||||||
Sbjct: 1147 cagaaacttcagcagacgatg 1167



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>gb|AC116683.7| Mus musculus chromosome 7, clone RP24-472H13, complete sequence
          Length = 126085

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 354  atgagctagttgagatcaatg 374
            |||||||||||||||||||||
Sbjct: 9807 atgagctagttgagatcaatg 9827



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>gb|BT013662.1| Lycopersicon esculentum clone 132481F, mRNA sequence
          Length = 2080

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 442  tgtggaagtgaaactgttgg 461
            ||||||||||||||||||||
Sbjct: 1283 tgtggaagtgaaactgttgg 1302



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>gb|AC134879.3| Homo sapiens BAC clone RP11-295P22 from Y, complete sequence
          Length = 205515

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 459   tggatggtactggaattgaaagga 482
             |||| |||||||||||||||||||
Sbjct: 93074 tggaaggtactggaattgaaagga 93051



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>ref|XM_917520.2| PREDICTED: Mus musculus similar to Spectrin beta chain, brain 4
          (Spectrin, non-erythroid beta chain 4) (Beta-V
          spectrin) (BSPECV) (LOC640524), mRNA
          Length = 11049

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 17 tggtggaggcatgggggctg 36
          ||||||||||||||||||||
Sbjct: 90 tggtggaggcatgggggctg 71



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>emb|AL033524.11|HS1090E8 Human DNA sequence from clone RP5-1090E8 on chromosome 1p34.1-34.3
            Contains the 5' end of a novel gene, complete sequence
          Length = 101728

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 396  acgtagaagctgtggctcagagac 419
            |||||||||| |||||||||||||
Sbjct: 3457 acgtagaagcagtggctcagagac 3434



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>emb|CR812469.6| Zebrafish DNA sequence from clone DKEY-286F3 in linkage group 5, complete
              sequence
          Length = 162086

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 440    actgtggaagtgaaactgttggat 463
              |||| |||||||||||||||||||
Sbjct: 116705 actgaggaagtgaaactgttggat 116728



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>dbj|AB246912.1| Hemerocallis fulva x Hemerocallis citrina DNA, microsatellite
           HemC27
          Length = 711

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 521 gaggtaatcaatctttcacc 540
           ||||||||||||||||||||
Sbjct: 71  gaggtaatcaatctttcacc 90



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>gb|AC084212.17| Homo sapiens 3 BAC RP11-109B8 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 145318

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 524   gtaatcaatctttcacctct 543
             ||||||||||||||||||||
Sbjct: 93876 gtaatcaatctttcacctct 93895



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>gb|AC015476.10| Homo sapiens, clone RP11-16G11, complete sequence
          Length = 154768

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 402    aagctgtggctcagagactt 421
              ||||||||||||||||||||
Sbjct: 122432 aagctgtggctcagagactt 122413



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>gb|AC104233.2| Homo sapiens chromosome 8, clone RP11-3G20, complete sequence
          Length = 152440

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 402    aagctgtggctcagagactt 421
              ||||||||||||||||||||
Sbjct: 112747 aagctgtggctcagagactt 112766



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>gb|AY530950.1| Zea mays putative zinc finger protein (Z438D03.1), unknown (Z438D03.5),
             epsilon-COP (Z438D03.6), putative kinase (Z438D03.7),
             unknown (Z438D03.25), and C1-B73 (Z438D03.27) genes,
             complete cds
          Length = 185988

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 93    tcagcagacgatggtggagatgtt 116
             ||||||||||||| ||||||||||
Sbjct: 13065 tcagcagacgatgatggagatgtt 13088



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>gb|AC122017.5| Mus musculus BAC clone RP24-361J4 from 7, complete sequence
          Length = 158807

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 377   aatagtgttttagggttgga 396
             ||||||||||||||||||||
Sbjct: 63593 aatagtgttttagggttgga 63574



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>emb|AL833774.4| Mouse DNA sequence from clone RP23-383I16 on chromosome 2, complete
              sequence
          Length = 194045

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 17     tggtggaggcatgggggctg 36
              ||||||||||||||||||||
Sbjct: 102196 tggtggaggcatgggggctg 102177



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>dbj|AP005360.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1529G8, complete
              sequence
          Length = 147788

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 402    aagctgtggctcagagactt 421
              ||||||||||||||||||||
Sbjct: 132754 aagctgtggctcagagactt 132773


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,031,394
Number of Sequences: 3902068
Number of extensions: 4031394
Number of successful extensions: 68693
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 68572
Number of HSP's gapped (non-prelim): 119
length of query: 592
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 569
effective length of database: 17,143,297,704
effective search space: 9754536393576
effective search space used: 9754536393576
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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