ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal38j02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LEA14_SOYBN (P46519) Desiccation protectant protein Lea14 homolog 67 2e-11
2LEA14_GOSHI (P46518) Late embryogenesis abundant protein Lea14-A 67 3e-11
3DRPD_CRAPL (P22241) Desiccation-related protein PCC27-45 66 7e-11
4LEA14_ARATH (O03983) Putative dessication-related protein LEA14 61 2e-09
5Y1218_HAEIN (Q57251) Putative L-lactate permease 38 0.016
6UC29_MAIZE (P80635) Unknown protein from 2D-PAGE of etiolated co... 37 0.045
7TSAG_RICTS (P22940) 56 kDa type-specific antigen precursor (TSA)... 33 0.50
8DEF_SYNEL (Q8DIB4) Peptide deformylase (EC 3.5.1.88) (PDF) (Poly... 33 0.66
9Y1138_METJA (Q58538) Hypothetical protein MJ1138 32 1.1
10ALKJ_PSEPU (Q9WWW2) Alcohol dehydrogenase [acceptor] (EC 1.1.99.-) 31 1.9
11Y3593_NOCFA (Q5YTQ0) UPF0042 protein nfa35930 31 2.5
12FTSK2_RALSO (Q8XWX9) DNA translocase ftsK 2 30 4.3
13NUDC3_HUMAN (Q8IVD9) NudC domain-containing protein 3 30 5.6

>LEA14_SOYBN (P46519) Desiccation protectant protein Lea14 homolog|
          Length = 152

 Score = 67.4 bits (163), Expect = 2e-11
 Identities = 36/132 (27%), Positives = 64/132 (48%)
 Frame = +1

Query: 139 IDKVKDFIHDIGEKIEEAVGFGKPSADVARIHVPHIGLHRADLVVDVLIKNPNPVPIPLV 318
           +DK K+++       E+     KP A V  +    +     + +  V + NP   PIP+ 
Sbjct: 5   LDKAKNYV------AEKVTNMPKPEASVTDVDFKRVSRDSVEYLAKVSVSNPYSTPIPIC 58

Query: 319 DIDYLIDSDGRKLVAGLIPDAGTVRAHGEETVKVPITLDFDDIRSTYADIKPGSIIPYLL 498
           +I Y + S G+++ +G IPD G+++A     + VP+ +    + S   DI     I Y L
Sbjct: 59  EIKYSLKSAGKEIASGTIPDPGSLKASDTTMLDVPVKVPHSILLSLAKDIGADWDIDYQL 118

Query: 499 RVVFLVDVPVFG 534
            +  ++D+PV G
Sbjct: 119 DLGLVIDLPVIG 130



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>LEA14_GOSHI (P46518) Late embryogenesis abundant protein Lea14-A|
          Length = 151

 Score = 67.0 bits (162), Expect = 3e-11
 Identities = 36/132 (27%), Positives = 65/132 (49%)
 Frame = +1

Query: 139 IDKVKDFIHDIGEKIEEAVGFGKPSADVARIHVPHIGLHRADLVVDVLIKNPNPVPIPLV 318
           ++K KDF+      +++     KP A V+ + + H+     +    V + NP    IP+ 
Sbjct: 5   LEKAKDFV------VDKVANIKKPEASVSDVDLKHVSRECVEYGAKVSVSNPYSHSIPIC 58

Query: 319 DIDYLIDSDGRKLVAGLIPDAGTVRAHGEETVKVPITLDFDDIRSTYADIKPGSIIPYLL 498
           +I Y   S GR + +G IPD G+++A     + VP+ + ++ + S   DI     I Y L
Sbjct: 59  EISYNFRSAGRGIASGTIPDPGSLKASDTTMLDVPVKVPYNILVSLVKDIGADWDIDYEL 118

Query: 499 RVVFLVDVPVFG 534
            +   +D+P+ G
Sbjct: 119 ELGLTIDLPIVG 130



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>DRPD_CRAPL (P22241) Desiccation-related protein PCC27-45|
          Length = 151

 Score = 65.9 bits (159), Expect = 7e-11
 Identities = 37/132 (28%), Positives = 67/132 (50%)
 Frame = +1

Query: 139 IDKVKDFIHDIGEKIEEAVGFGKPSADVARIHVPHIGLHRADLVVDVLIKNPNPVPIPLV 318
           ++K K+F+       E+     KP A V  + +  +G H    +  + ++NP    IP+ 
Sbjct: 5   MNKAKNFV------AEKVANVEKPKASVEDVDLKDVGRHGITYLTRICVENPYSASIPVG 58

Query: 319 DIDYLIDSDGRKLVAGLIPDAGTVRAHGEETVKVPITLDFDDIRSTYADIKPGSIIPYLL 498
           +I Y + S GR +V+G IPD G+++ + +  ++  I +    + S   DI     I Y+L
Sbjct: 59  EIKYTLKSAGRVIVSGNIPDPGSLKGNDKTMLEPAIKVPHSALVSLIKDIGADMDIDYVL 118

Query: 499 RVVFLVDVPVFG 534
            +  +VD+PV G
Sbjct: 119 ELGLVVDLPVIG 130



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>LEA14_ARATH (O03983) Putative dessication-related protein LEA14|
          Length = 151

 Score = 61.2 bits (147), Expect = 2e-09
 Identities = 33/132 (25%), Positives = 62/132 (46%)
 Frame = +1

Query: 139 IDKVKDFIHDIGEKIEEAVGFGKPSADVARIHVPHIGLHRADLVVDVLIKNPNPVPIPLV 318
           +DK KDF+ D      +     KP   V  + +  +     + +  V + NP    IP+ 
Sbjct: 5   LDKAKDFVAD------KLTAIPKPEGSVTDVDLKDVNRDSVEYLAKVSVTNPYSHSIPIC 58

Query: 319 DIDYLIDSDGRKLVAGLIPDAGTVRAHGEETVKVPITLDFDDIRSTYADIKPGSIIPYLL 498
           +I +   S GR++  G IPD G+++A     + +P+ + +  + +   D+     I Y L
Sbjct: 59  EISFTFHSAGREIGKGKIPDPGSLKAKDMTALDIPVVVPYSILFNLARDVGVDWDIDYEL 118

Query: 499 RVVFLVDVPVFG 534
           ++   +D+PV G
Sbjct: 119 QIGLTIDLPVVG 130



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>Y1218_HAEIN (Q57251) Putative L-lactate permease|
          Length = 532

 Score = 38.1 bits (87), Expect = 0.016
 Identities = 36/116 (31%), Positives = 51/116 (43%), Gaps = 10/116 (8%)
 Frame = +1

Query: 181 IEEAVGFGKPSADVARIHVPHIGLHRADLVVDVLIKNPNPVPIPLVDIDYLIDSDGRKLV 360
           IE A GFG P+A  A I V  +G H   + +  LI N  PV    V           KL 
Sbjct: 115 IEGASGFGTPAAIAAPILV-GLGFHPLKVAMLALIMNSVPVSFGAVGTPTWFGFGALKLS 173

Query: 361 AGLIPDAGTVRA--HGEETVKVP-----ITLDFDDIRSTYADI---KPGSIIPYLL 498
             +I + G++ A  H    + +P     I +++DDIR     I     G ++PY L
Sbjct: 174 EDMILEIGSITAFIHSIAALIIPLLALRILVNWDDIRKNIVFIYISVLGCVVPYFL 229



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>UC29_MAIZE (P80635) Unknown protein from 2D-PAGE of etiolated coleoptile (Spot|
           45) (Fragment)
          Length = 15

 Score = 36.6 bits (83), Expect = 0.045
 Identities = 15/15 (100%), Positives = 15/15 (100%)
 Frame = +1

Query: 289 NPNPVPIPLVDIDYL 333
           NPNPVPIPLVDIDYL
Sbjct: 1   NPNPVPIPLVDIDYL 15



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>TSAG_RICTS (P22940) 56 kDa type-specific antigen precursor (TSA) (56 kDa scrub|
           typhus antigen) (STA56) (TSG56)
          Length = 524

 Score = 33.1 bits (74), Expect = 0.50
 Identities = 20/61 (32%), Positives = 28/61 (45%)
 Frame = +1

Query: 292 PNPVPIPLVDIDYLIDSDGRKLVAGLIPDAGTVRAHGEETVKVPITLDFDDIRSTYADIK 471
           PN  P P  ++D L     R LV G+     T  +H  +    P+ +  D I   Y+DIK
Sbjct: 214 PNVQPRPRQNLDILDHGQWRHLVVGV-----TALSHANKPSVTPVKVLSDKITKIYSDIK 268

Query: 472 P 474
           P
Sbjct: 269 P 269



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>DEF_SYNEL (Q8DIB4) Peptide deformylase (EC 3.5.1.88) (PDF) (Polypeptide|
           deformylase)
          Length = 188

 Score = 32.7 bits (73), Expect = 0.66
 Identities = 17/61 (27%), Positives = 33/61 (54%)
 Frame = +1

Query: 139 IDKVKDFIHDIGEKIEEAVGFGKPSADVARIHVPHIGLHRADLVVDVLIKNPNPVPIPLV 318
           + KV D I DI  K+ + +     SAD   +  P +G+++  LV+D+   +P   P+ ++
Sbjct: 34  VSKVDDSIRDIARKMLQTMY----SADGIGLAAPQVGINKQILVIDIHPDDPEAEPLVMI 89

Query: 319 D 321
           +
Sbjct: 90  N 90



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>Y1138_METJA (Q58538) Hypothetical protein MJ1138|
          Length = 174

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 6/87 (6%)
 Frame = +1

Query: 190 AVGFG----KPSADVARIHVPHIGLHRADLVVDVLIKNPNPVPIPLVDIDYLIDS--DGR 351
           AVGF     +P  +V    +  +      + + VL+ NPNP+ I +  I + I +   G 
Sbjct: 17  AVGFSGCLEQPKIEVVGQKIQKVDADNTKIEIQVLVDNPNPIGISIDKISFDIYALVGGD 76

Query: 352 KLVAGLIPDAGTVRAHGEETVKVPITL 432
           K+  G    +      G  T  +P+T+
Sbjct: 77  KIYLGHGEQSNIKITSGNTTFTLPVTI 103



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>ALKJ_PSEPU (Q9WWW2) Alcohol dehydrogenase [acceptor] (EC 1.1.99.-)|
          Length = 552

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 36/116 (31%), Positives = 54/116 (46%), Gaps = 11/116 (9%)
 Frame = +1

Query: 157 FIHDIGEKIEEAVGFGKPSADVARIHVPHIGLHRADLVVD----VLIKNPNPVPIPLVDI 324
           ++ D G KI  AVG+G               LH  DL+      + +K+ NP+  PL+D 
Sbjct: 364 YLKDHGRKI--AVGYGYT-------------LHICDLLPKSRGRIGLKSANPMDDPLIDP 408

Query: 325 DYLID-SDGRKLVAGL-----IPDAGTVRAH-GEETVKVPITLDFDDIRSTYADIK 471
           +YL D  D + ++AG+     I DA ++  H   E V  P     D+I    ADI+
Sbjct: 409 NYLSDPEDIKTMIAGIKIGRAIFDAPSMAKHFKREIVPGPAVTSDDEI---VADIR 461



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>Y3593_NOCFA (Q5YTQ0) UPF0042 protein nfa35930|
          Length = 316

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 6/62 (9%)
 Frame = +1

Query: 139 IDKVKDFIHDIGEKIEEAVGFGKPSADVARIHVPHIGLH-----RADLVVDV-LIKNPNP 300
           ID  +  IH +  K+EEA G G P+A   ++ V   G        AD+V+DV  + NP+ 
Sbjct: 163 IDTTELSIHQLHRKLEEAYGGGAPAA--LQLTVQSFGFKYGVPLDADMVLDVRFLPNPHW 220

Query: 301 VP 306
           +P
Sbjct: 221 IP 222



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>FTSK2_RALSO (Q8XWX9) DNA translocase ftsK 2|
          Length = 781

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 12/100 (12%)
 Frame = +1

Query: 139 IDKVKDFIHDIGEKIEEAVGFGKPSADVARIHVPHIGLHRADLVVDVLIKNPNPVPIPL- 315
           ID++ D +  +G+K+EE +      A  A IH+       +  V+  LIK   P  I   
Sbjct: 556 IDELADLMMVVGKKVEELIARIAQKARAAGIHLVLATQRPSVDVITGLIKANVPTRIAFQ 615

Query: 316 ----VDIDYLIDSDGRKLVAG------LIPDAG-TVRAHG 402
               +D   ++D  G + + G      L P  G  VR HG
Sbjct: 616 VSSKIDSRTILDQQGAEALLGMGDMLYLAPGTGLPVRVHG 655



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>NUDC3_HUMAN (Q8IVD9) NudC domain-containing protein 3|
          Length = 361

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
 Frame = +1

Query: 286 KNPNPVPIPLVDIDYLIDSDGRKLVAGLIPDAGTVR--AHGEETVKVP 423
           K P PVP+  ++ID   + DG + V  + P  G V+  AHG +  + P
Sbjct: 106 KEPVPVPVQEIEIDSTTELDGHQEVEKVQP-PGPVKEMAHGSQEAEAP 152


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,483,008
Number of Sequences: 219361
Number of extensions: 579298
Number of successful extensions: 2392
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2342
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2390
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4200495993
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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