Clone Name	baal38g11
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	dbj|D10406.1|RIC340 Oryza sativa mRNA for ribosomal protein L41 ...	121	6e-25
2	dbj|AK069083.1| Oryza sativa (japonica cultivar-group) cDNA clon...	121	6e-25
3	gb|AY106167.1| Zea mays PCO141571 mRNA sequence	119	2e-24
4	dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D...	117	9e-24
5	dbj|AP003827.3| Oryza sativa (japonica cultivar-group) genomic D...	117	9e-24
6	dbj|AP005105.3| Oryza sativa (japonica cultivar-group) genomic D...	117	9e-24
7	gb|AY109380.1| Zea mays CL2281_1 mRNA sequence	115	4e-23
8	gb|BT016180.1| Zea mays clone Contig13 mRNA sequence	113	1e-22
9	ref|NM_117509.1| Arabidopsis thaliana structural constituent of ...	111	6e-22
10	gb|AY081639.1| Arabidopsis thaliana ribosomal protein (Z97336.1)...	111	6e-22
11	gb|AY065121.1| Arabidopsis thaliana ribosomal protein (Z97336.1)...	111	6e-22
12	emb|BX829272.1|CNS0A2I0 Arabidopsis thaliana Full-length cDNA Co...	111	6e-22
13	gb|AY085784.1| Arabidopsis thaliana clone 18153 mRNA, complete s...	111	6e-22
14	emb|Z97336.1|ATFCA1 Arabidopsis thaliana DNA chromosome 4, ESSA ...	107	9e-21
15	emb|AL161538.2|ATCHRIV38 Arabidopsis thaliana DNA chromosome 4, ...	107	9e-21
16	ref|NM_187105.2| Oryza sativa (japonica cultivar-group), mRNA	90	2e-15
17	dbj|AK121702.1| Oryza sativa (japonica cultivar-group) cDNA clon...	90	2e-15
18	dbj|AK063789.1| Oryza sativa (japonica cultivar-group) cDNA clon...	90	2e-15
19	gb|U64677.1|GHU64677 Gossypium hirsutum ribosomal protein L44 is...	90	2e-15
20	dbj|AP003802.2| Oryza sativa (japonica cultivar-group) genomic D...	86	3e-14
21	gb|DQ019457.1| Lilium longiflorum clone LP07 ribosomal protein-l...	84	1e-13
22	dbj|AK058924.1| Oryza sativa (japonica cultivar-group) cDNA clon...	80	2e-12
23	gb|M62396.1|YSAQLAG C.maltosa ribosomal protein L41 (LEL41) gene...	78	8e-12
24	dbj|AB226038.1| Aspergillus oryzae cDNA, contig sequence: AoEST2894	70	2e-09
25	dbj|AP007171.1| Aspergillus oryzae RIB40 genomic DNA, SC011	70	2e-09
26	gb|AF398144.1|AF398144 Brassica rapa subsp. pekinensis 60S ribos...	66	3e-08
27	gb|U64678.1|GHU64678 Gossypium hirsutum ribosomal protein L44 is...	66	3e-08
28	gb|AY674230.1| Ixodes pacificus clone IP_7_60_92_138_CLU ribosom...	62	5e-07
29	gb|DQ066246.1| Ixodes scapularis isolate ISN-L-86 ribosomal prot...	62	5e-07
30	gb|AY497301.1| Phalaenopsis hybrid cultivar 60S ribosomal protei...	58	7e-06
31	gb|DQ284457.1| Solanum tuberosum clone 014B12 ribosomal protein ...	56	3e-05
32	ref|NM_113242.1| Arabidopsis thaliana structural constituent of ...	50	0.002
33	ref|XM_658693.1| Aspergillus nidulans FGSC A4 60S ribosomal prot...	50	0.002
34	gb|AY062855.1| Arabidopsis thaliana 60S ribosomal protein L44-li...	50	0.002
35	gb|AY085174.1| Arabidopsis thaliana clone 13557 mRNA, complete s...	50	0.002
36	gb|BT001193.1| Arabidopsis thaliana 60S ribosomal protein L44-li...	50	0.002
37	ref|XM_959447.1| Neurospora crassa OR74A 60S RIBOSOMAL PROTEIN L...	46	0.028
38	ref|XM_324885.1| Neurospora crassa OR74A 60S RIBOSOMAL PROTEIN L...	46	0.028
39	gb|AF526255.1| Chlamys farreri clone iolscfcl357ct373cn393 ribos...	46	0.028
40	dbj|AB015474.1| Arabidopsis thaliana genomic DNA, chromosome 3, ...	46	0.028
41	ref|XM_390357.1| Gibberella zeae PH-1 chromosome 1 RL44_PICJA 60...	44	0.11
42	ref|XM_368698.1| Magnaporthe grisea 70-15 chromosome VI hypothet...	42	0.43
43	gb|DQ063217.1| Candida glycerinogenes ribosomal protein L41 gene...	42	0.43
44	emb|AJ605265.1| Platichthys flesus partial mRNA for ribosomal pr...	42	0.43
45	gb|U80976.1|BMU80976 Brugia malayi ribosomal protein L44 (bm-rpl...	40	1.7
46	gb|DQ244055.1| Hordeum vulgare reticulon mRNA, complete cds	38	6.8
47	gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence	38	6.8
48	ref|NM_203601.1| Xenopus tropicalis myogenic factor 5 (MYF5), mRNA	38	6.8
49	gb|AC164547.4| Mus musculus BAC clone RP24-198D11 from chromosom...	38	6.8
50	gb|BC061421.1| Xenopus tropicalis myogenic factor 5, mRNA (cDNA ...	38	6.8
51	gb|AC148814.1| Oryza sativa (japonica cultivar-group) chromosome...	38	6.8
52	ref|XM_583445.2| PREDICTED: Bos taurus hypothetical LOC538883 (L...	38	6.8
53	gb|AY050251.1| Xenopus tropicalis myogenic factor MYF-5 gene, co...	38	6.8
54	ref|XM_750055.1| Aspergillus fumigatus Af293 ribosomal protein L...	38	6.8
55	ref|XM_567391.1| Cryptococcus neoformans var. neoformans JEC21 h...	38	6.8
56	gb|AC159263.3| Mus musculus BAC clone RP24-66K21 from chromosome...	38	6.8
57	dbj|BA000032.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromo...	38	6.8
58	gb|AC068781.19| Homo sapiens 3 BAC RP11-457K10 (Roswell Park Can...	38	6.8
59	emb|AJ579311.1|XTR579311 Silurana tropicalis mRNA for myf5 protein	38	6.8
60	dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D...	38	6.8
61	dbj|AK106485.1| Oryza sativa (japonica cultivar-group) cDNA clon...	38	6.8
62	emb|CR762266.2| Xenopus tropicalis finished cDNA, clone TGas127b01	38	6.8

---

>dbj|D10406.1|RIC340 Oryza sativa mRNA for ribosomal protein L41 (340 gene), partial
           sequence
          Length = 444

 Score =  121 bits (61), Expect = 6e-25
 Identities = 73/77 (94%)
 Strand = Plus / Plus

                                                                       
Query: 50  atggtgaacgttccgaaaaccaagaagacctactgcaagaacaaggagtgcaagaagcac 109
           |||||||||||||| || |||||||||||||||||||||||||||||||||| |||||||
Sbjct: 46  atggtgaacgttcccaagaccaagaagacctactgcaagaacaaggagtgcaggaagcac 105

                            
Query: 110 accctccacaaggtcac 126
           ||||| |||||||||||
Sbjct: 106 acccttcacaaggtcac 122

---

>dbj|AK069083.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023009C02, full
            insert sequence
          Length = 2173

 Score =  121 bits (61), Expect = 6e-25
 Identities = 73/77 (94%)
 Strand = Plus / Plus

                                                                        
Query: 50   atggtgaacgttccgaaaaccaagaagacctactgcaagaacaaggagtgcaagaagcac 109
            |||||||||||||| || |||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1698 atggtgaacgttcccaagaccaagaagacctactgcaagaacaaggagtgcaggaagcac 1757

                             
Query: 110  accctccacaaggtcac 126
            ||||| |||||||||||
Sbjct: 1758 acccttcacaaggtcac 1774

---

>gb|AY106167.1| Zea mays PCO141571 mRNA sequence
          Length = 641

 Score =  119 bits (60), Expect = 2e-24
 Identities = 84/92 (91%)
 Strand = Plus / Plus

                                                                       
Query: 50  atggtgaacgttccgaaaaccaagaagacctactgcaagaacaaggagtgcaagaagcac 109
           ||||||||||||||||||||||||||||||||||| ||||||||||| |||| |||||||
Sbjct: 60  atggtgaacgttccgaaaaccaagaagacctactgtaagaacaaggaatgcaggaagcac 119

                                           
Query: 110 accctccacaaggtcacgcaatataagaaagg 141
           ||||| |||||||| || || || ||||||||
Sbjct: 120 accctgcacaaggttacccagtacaagaaagg 151

---

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  117 bits (59), Expect = 9e-24
 Identities = 71/75 (94%)
 Strand = Plus / Plus

                                                                            
Query: 52       ggtgaacgttccgaaaaccaagaagacctactgcaagaacaaggagtgcaagaagcacac 111
                |||||||||||| || |||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 20257687 ggtgaacgttcccaagaccaagaagacctactgcaagaacaaggagtgcaggaagcacac 20257746

                               
Query: 112      cctccacaaggtcac 126
                ||| |||||||||||
Sbjct: 20257747 ccttcacaaggtcac 20257761



 Score =  117 bits (59), Expect = 9e-24
 Identities = 71/75 (94%)
 Strand = Plus / Plus

                                                                            
Query: 52       ggtgaacgttccgaaaaccaagaagacctactgcaagaacaaggagtgcaagaagcacac 111
                |||||||||||| || |||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 20251521 ggtgaacgttcccaagaccaagaagacctactgcaagaacaaggagtgcaggaagcacac 20251580

                               
Query: 112      cctccacaaggtcac 126
                ||| |||||||||||
Sbjct: 20251581 ccttcacaaggtcac 20251595



 Score =  117 bits (59), Expect = 9e-24
 Identities = 71/75 (94%)
 Strand = Plus / Plus

                                                                            
Query: 52       ggtgaacgttccgaaaaccaagaagacctactgcaagaacaaggagtgcaagaagcacac 111
                |||||||||||| || |||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 20239469 ggtgaacgttcccaagaccaagaagacctactgcaagaacaaggagtgcaggaagcacac 20239528

                               
Query: 112      cctccacaaggtcac 126
                ||| |||||||||||
Sbjct: 20239529 ccttcacaaggtcac 20239543



 Score =  117 bits (59), Expect = 9e-24
 Identities = 71/75 (94%)
 Strand = Plus / Plus

                                                                            
Query: 52       ggtgaacgttccgaaaaccaagaagacctactgcaagaacaaggagtgcaagaagcacac 111
                |||||||||||| || |||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 20233302 ggtgaacgttcccaagaccaagaagacctactgcaagaacaaggagtgcaggaagcacac 20233361

                               
Query: 112      cctccacaaggtcac 126
                ||| |||||||||||
Sbjct: 20233362 ccttcacaaggtcac 20233376



 Score =  117 bits (59), Expect = 9e-24
 Identities = 71/75 (94%)
 Strand = Plus / Plus

                                                                            
Query: 52       ggtgaacgttccgaaaaccaagaagacctactgcaagaacaaggagtgcaagaagcacac 111
                |||||||||||| || |||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 20221252 ggtgaacgttcccaagaccaagaagacctactgcaagaacaaggagtgcaggaagcacac 20221311

                               
Query: 112      cctccacaaggtcac 126
                ||| |||||||||||
Sbjct: 20221312 ccttcacaaggtcac 20221326



 Score =  117 bits (59), Expect = 9e-24
 Identities = 71/75 (94%)
 Strand = Plus / Plus

                                                                            
Query: 52       ggtgaacgttccgaaaaccaagaagacctactgcaagaacaaggagtgcaagaagcacac 111
                |||||||||||| || |||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 20215085 ggtgaacgttcccaagaccaagaagacctactgcaagaacaaggagtgcaggaagcacac 20215144

                               
Query: 112      cctccacaaggtcac 126
                ||| |||||||||||
Sbjct: 20215145 ccttcacaaggtcac 20215159



 Score =  117 bits (59), Expect = 9e-24
 Identities = 71/75 (94%)
 Strand = Plus / Plus

                                                                            
Query: 52       ggtgaacgttccgaaaaccaagaagacctactgcaagaacaaggagtgcaagaagcacac 111
                |||||||||||| || |||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 20208521 ggtgaacgttcccaagaccaagaagacctactgcaagaacaaggagtgcaggaagcacac 20208580

                               
Query: 112      cctccacaaggtcac 126
                ||| |||||||||||
Sbjct: 20208581 ccttcacaaggtcac 20208595



 Score =  117 bits (59), Expect = 9e-24
 Identities = 71/75 (94%)
 Strand = Plus / Plus

                                                                            
Query: 52       ggtgaacgttccgaaaaccaagaagacctactgcaagaacaaggagtgcaagaagcacac 111
                |||||||||||| || |||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 20204151 ggtgaacgttcccaagaccaagaagacctactgcaagaacaaggagtgcaggaagcacac 20204210

                               
Query: 112      cctccacaaggtcac 126
                ||| |||||||||||
Sbjct: 20204211 ccttcacaaggtcac 20204225



 Score = 85.7 bits (43), Expect = 3e-14
 Identities = 79/91 (86%)
 Strand = Plus / Plus

                                                                            
Query: 52       ggtgaacgttccgaaaaccaagaagacctactgcaagaacaaggagtgcaagaagcacac 111
                ||||||||| || ||||| |||||||| ||||| ||||||||||| |||| |||||||||
Sbjct: 15396992 ggtgaacgtgccaaaaactaagaagacttactgtaagaacaaggaatgcaggaagcacac 15397051

                                               
Query: 112      cctccacaaggtcacgcaatataagaaagga 142
                ||| |||||||| || || || |||||||||
Sbjct: 15397052 cctacacaaggttacccagtacaagaaagga 15397082

---

>dbj|AP003827.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1372_D12
          Length = 179898

 Score =  117 bits (59), Expect = 9e-24
 Identities = 71/75 (94%)
 Strand = Plus / Plus

                                                                          
Query: 52     ggtgaacgttccgaaaaccaagaagacctactgcaagaacaaggagtgcaagaagcacac 111
              |||||||||||| || |||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 160075 ggtgaacgttcccaagaccaagaagacctactgcaagaacaaggagtgcaggaagcacac 160134

                             
Query: 112    cctccacaaggtcac 126
              ||| |||||||||||
Sbjct: 160135 ccttcacaaggtcac 160149



 Score =  117 bits (59), Expect = 9e-24
 Identities = 71/75 (94%)
 Strand = Plus / Plus

                                                                          
Query: 52     ggtgaacgttccgaaaaccaagaagacctactgcaagaacaaggagtgcaagaagcacac 111
              |||||||||||| || |||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 153909 ggtgaacgttcccaagaccaagaagacctactgcaagaacaaggagtgcaggaagcacac 153968

                             
Query: 112    cctccacaaggtcac 126
              ||| |||||||||||
Sbjct: 153969 ccttcacaaggtcac 153983



 Score =  117 bits (59), Expect = 9e-24
 Identities = 71/75 (94%)
 Strand = Plus / Plus

                                                                          
Query: 52     ggtgaacgttccgaaaaccaagaagacctactgcaagaacaaggagtgcaagaagcacac 111
              |||||||||||| || |||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 141857 ggtgaacgttcccaagaccaagaagacctactgcaagaacaaggagtgcaggaagcacac 141916

                             
Query: 112    cctccacaaggtcac 126
              ||| |||||||||||
Sbjct: 141917 ccttcacaaggtcac 141931



 Score =  117 bits (59), Expect = 9e-24
 Identities = 71/75 (94%)
 Strand = Plus / Plus

                                                                          
Query: 52     ggtgaacgttccgaaaaccaagaagacctactgcaagaacaaggagtgcaagaagcacac 111
              |||||||||||| || |||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 135690 ggtgaacgttcccaagaccaagaagacctactgcaagaacaaggagtgcaggaagcacac 135749

                             
Query: 112    cctccacaaggtcac 126
              ||| |||||||||||
Sbjct: 135750 ccttcacaaggtcac 135764



 Score =  117 bits (59), Expect = 9e-24
 Identities = 71/75 (94%)
 Strand = Plus / Plus

                                                                          
Query: 52     ggtgaacgttccgaaaaccaagaagacctactgcaagaacaaggagtgcaagaagcacac 111
              |||||||||||| || |||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 123640 ggtgaacgttcccaagaccaagaagacctactgcaagaacaaggagtgcaggaagcacac 123699

                             
Query: 112    cctccacaaggtcac 126
              ||| |||||||||||
Sbjct: 123700 ccttcacaaggtcac 123714



 Score =  117 bits (59), Expect = 9e-24
 Identities = 71/75 (94%)
 Strand = Plus / Plus

                                                                          
Query: 52     ggtgaacgttccgaaaaccaagaagacctactgcaagaacaaggagtgcaagaagcacac 111
              |||||||||||| || |||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 117473 ggtgaacgttcccaagaccaagaagacctactgcaagaacaaggagtgcaggaagcacac 117532

                             
Query: 112    cctccacaaggtcac 126
              ||| |||||||||||
Sbjct: 117533 ccttcacaaggtcac 117547



 Score =  117 bits (59), Expect = 9e-24
 Identities = 71/75 (94%)
 Strand = Plus / Plus

                                                                          
Query: 52     ggtgaacgttccgaaaaccaagaagacctactgcaagaacaaggagtgcaagaagcacac 111
              |||||||||||| || |||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 110909 ggtgaacgttcccaagaccaagaagacctactgcaagaacaaggagtgcaggaagcacac 110968

                             
Query: 112    cctccacaaggtcac 126
              ||| |||||||||||
Sbjct: 110969 ccttcacaaggtcac 110983



 Score =  117 bits (59), Expect = 9e-24
 Identities = 71/75 (94%)
 Strand = Plus / Plus

                                                                          
Query: 52     ggtgaacgttccgaaaaccaagaagacctactgcaagaacaaggagtgcaagaagcacac 111
              |||||||||||| || |||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 106539 ggtgaacgttcccaagaccaagaagacctactgcaagaacaaggagtgcaggaagcacac 106598

                             
Query: 112    cctccacaaggtcac 126
              ||| |||||||||||
Sbjct: 106599 ccttcacaaggtcac 106613

---

>dbj|AP005105.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7,
           BAC clone:OSJNBb0052O11
          Length = 106467

 Score =  117 bits (59), Expect = 9e-24
 Identities = 71/75 (94%)
 Strand = Plus / Plus

                                                                       
Query: 52  ggtgaacgttccgaaaaccaagaagacctactgcaagaacaaggagtgcaagaagcacac 111
           |||||||||||| || |||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 298 ggtgaacgttcccaagaccaagaagacctactgcaagaacaaggagtgcaggaagcacac 357

                          
Query: 112 cctccacaaggtcac 126
           ||| |||||||||||
Sbjct: 358 ccttcacaaggtcac 372

---

>gb|AY109380.1| Zea mays CL2281_1 mRNA sequence
          Length = 1446

 Score =  115 bits (58), Expect = 4e-23
 Identities = 70/74 (94%)
 Strand = Plus / Plus

                                                                       
Query: 50  atggtgaacgttccgaaaaccaagaagacctactgcaagaacaaggagtgcaagaagcac 109
           |||||||||||||| || |||||||||||||||||||||||||| |||||||||||||||
Sbjct: 493 atggtgaacgttcctaagaccaagaagacctactgcaagaacaaagagtgcaagaagcac 552

                         
Query: 110 accctccacaaggt 123
           || |||||||||||
Sbjct: 553 actctccacaaggt 566

---

>gb|BT016180.1| Zea mays clone Contig13 mRNA sequence
          Length = 640

 Score =  113 bits (57), Expect = 1e-22
 Identities = 81/89 (91%)
 Strand = Plus / Plus

                                                                       
Query: 50  atggtgaacgttccgaaaaccaagaagacctactgcaagaacaaggagtgcaagaagcac 109
           |||||||||||||| || ||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 90  atggtgaacgttcctaagaccaagaagacgtactgcaagaacaaagagtgcaagaagcac 149

                                        
Query: 110 accctccacaaggtcacgcaatataagaa 138
           || ||||||||||| || || ||||||||
Sbjct: 150 acactccacaaggtgactcagtataagaa 178

---

>ref|NM_117509.1| Arabidopsis thaliana structural constituent of ribosome AT4G14320
           mRNA, complete cds
          Length = 533

 Score =  111 bits (56), Expect = 6e-22
 Identities = 83/92 (90%)
 Strand = Plus / Plus

                                                                       
Query: 50  atggtgaacgttccgaaaaccaagaagacctactgcaagaacaaggagtgcaagaagcac 109
           ||||||||| |||||||||| ||||| || ||||||||||||||||||||||||||||| 
Sbjct: 80  atggtgaacattccgaaaactaagaacacttactgcaagaacaaggagtgcaagaagcat 139

                                           
Query: 110 accctccacaaggtcacgcaatataagaaagg 141
           ||| | |||||||| ||||| |||||||||||
Sbjct: 140 accttgcacaaggtgacgcagtataagaaagg 171

---

>gb|AY081639.1| Arabidopsis thaliana ribosomal protein (Z97336.1) mRNA, complete
           cds
          Length = 371

 Score =  111 bits (56), Expect = 6e-22
 Identities = 83/92 (90%)
 Strand = Plus / Plus

                                                                       
Query: 50  atggtgaacgttccgaaaaccaagaagacctactgcaagaacaaggagtgcaagaagcac 109
           ||||||||| |||||||||| ||||| || ||||||||||||||||||||||||||||| 
Sbjct: 1   atggtgaacattccgaaaactaagaacacttactgcaagaacaaggagtgcaagaagcat 60

                                           
Query: 110 accctccacaaggtcacgcaatataagaaagg 141
           ||| | |||||||| ||||| |||||||||||
Sbjct: 61  accttgcacaaggtgacgcagtataagaaagg 92

---

>gb|AY065121.1| Arabidopsis thaliana ribosomal protein (Z97336.1) mRNA, complete
           cds
          Length = 494

 Score =  111 bits (56), Expect = 6e-22
 Identities = 83/92 (90%)
 Strand = Plus / Plus

                                                                       
Query: 50  atggtgaacgttccgaaaaccaagaagacctactgcaagaacaaggagtgcaagaagcac 109
           ||||||||| |||||||||| ||||| || ||||||||||||||||||||||||||||| 
Sbjct: 55  atggtgaacattccgaaaactaagaacacttactgcaagaacaaggagtgcaagaagcat 114

                                           
Query: 110 accctccacaaggtcacgcaatataagaaagg 141
           ||| | |||||||| ||||| |||||||||||
Sbjct: 115 accttgcacaaggtgacgcagtataagaaagg 146

---

>emb|BX829272.1|CNS0A2I0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL86ZH09 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 480

 Score =  111 bits (56), Expect = 6e-22
 Identities = 83/92 (90%)
 Strand = Plus / Plus

                                                                       
Query: 50  atggtgaacgttccgaaaaccaagaagacctactgcaagaacaaggagtgcaagaagcac 109
           ||||||||| |||||||||| ||||| || ||||||||||||||||||||||||||||| 
Sbjct: 39  atggtgaacattccgaaaactaagaacacttactgcaagaacaaggagtgcaagaagcat 98

                                           
Query: 110 accctccacaaggtcacgcaatataagaaagg 141
           ||| | |||||||| ||||| |||||||||||
Sbjct: 99  accttgcacaaggtgacgcagtataagaaagg 130

---

>gb|AY085784.1| Arabidopsis thaliana clone 18153 mRNA, complete sequence
          Length = 533

 Score =  111 bits (56), Expect = 6e-22
 Identities = 83/92 (90%)
 Strand = Plus / Plus

                                                                       
Query: 50  atggtgaacgttccgaaaaccaagaagacctactgcaagaacaaggagtgcaagaagcac 109
           ||||||||| |||||||||| ||||| || ||||||||||||||||||||||||||||| 
Sbjct: 80  atggtgaacattccgaaaactaagaacacttactgcaagaacaaggagtgcaagaagcat 139

                                           
Query: 110 accctccacaaggtcacgcaatataagaaagg 141
           ||| | |||||||| ||||| |||||||||||
Sbjct: 140 accttgcacaaggtgacgcagtataagaaagg 171

---

>emb|Z97336.1|ATFCA1 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No.
            1
          Length = 206606

 Score =  107 bits (54), Expect = 9e-21
 Identities = 81/90 (90%)
 Strand = Plus / Minus

                                                                        
Query: 52   ggtgaacgttccgaaaaccaagaagacctactgcaagaacaaggagtgcaagaagcacac 111
            ||||||| |||||||||| ||||| || ||||||||||||||||||||||||||||| ||
Sbjct: 1233 ggtgaacattccgaaaactaagaacacttactgcaagaacaaggagtgcaagaagcatac 1174

                                          
Query: 112  cctccacaaggtcacgcaatataagaaagg 141
            | | |||||||| ||||| |||||||||||
Sbjct: 1173 cttgcacaaggtgacgcagtataagaaagg 1144

---

>emb|AL161538.2|ATCHRIV38 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 38
          Length = 198944

 Score =  107 bits (54), Expect = 9e-21
 Identities = 81/90 (90%)
 Strand = Plus / Minus

                                                                          
Query: 52     ggtgaacgttccgaaaaccaagaagacctactgcaagaacaaggagtgcaagaagcacac 111
              ||||||| |||||||||| ||||| || ||||||||||||||||||||||||||||| ||
Sbjct: 140673 ggtgaacattccgaaaactaagaacacttactgcaagaacaaggagtgcaagaagcatac 140614

                                            
Query: 112    cctccacaaggtcacgcaatataagaaagg 141
              | | |||||||| ||||| |||||||||||
Sbjct: 140613 cttgcacaaggtgacgcagtataagaaagg 140584

---

>ref|NM_187105.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 701

 Score = 89.7 bits (45), Expect = 2e-15
 Identities = 81/93 (87%)
 Strand = Plus / Plus

                                                                       
Query: 50  atggtgaacgttccgaaaaccaagaagacctactgcaagaacaaggagtgcaagaagcac 109
           ||||||||||| || ||||| |||||||| ||||| ||||||||||| |||| |||||||
Sbjct: 77  atggtgaacgtgccaaaaactaagaagacttactgtaagaacaaggaatgcaggaagcac 136

                                            
Query: 110 accctccacaaggtcacgcaatataagaaagga 142
           ||||| |||||||| || || || |||||||||
Sbjct: 137 accctacacaaggttacccagtacaagaaagga 169

---

>dbj|AK121702.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033073H17, full
           insert sequence
          Length = 725

 Score = 89.7 bits (45), Expect = 2e-15
 Identities = 81/93 (87%)
 Strand = Plus / Plus

                                                                       
Query: 50  atggtgaacgttccgaaaaccaagaagacctactgcaagaacaaggagtgcaagaagcac 109
           ||||||||||| || ||||| |||||||| ||||| ||||||||||| |||| |||||||
Sbjct: 101 atggtgaacgtgccaaaaactaagaagacttactgtaagaacaaggaatgcaggaagcac 160

                                            
Query: 110 accctccacaaggtcacgcaatataagaaagga 142
           ||||| |||||||| || || || |||||||||
Sbjct: 161 accctacacaaggttacccagtacaagaaagga 193

---

>dbj|AK063789.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-E03, full
           insert sequence
          Length = 701

 Score = 89.7 bits (45), Expect = 2e-15
 Identities = 81/93 (87%)
 Strand = Plus / Plus

                                                                       
Query: 50  atggtgaacgttccgaaaaccaagaagacctactgcaagaacaaggagtgcaagaagcac 109
           ||||||||||| || ||||| |||||||| ||||| ||||||||||| |||| |||||||
Sbjct: 77  atggtgaacgtgccaaaaactaagaagacttactgtaagaacaaggaatgcaggaagcac 136

                                            
Query: 110 accctccacaaggtcacgcaatataagaaagga 142
           ||||| |||||||| || || || |||||||||
Sbjct: 137 accctacacaaggttacccagtacaagaaagga 169

---

>gb|U64677.1|GHU64677 Gossypium hirsutum ribosomal protein L44 isoform a (RL44), complete
           cds
          Length = 455

 Score = 89.7 bits (45), Expect = 2e-15
 Identities = 78/89 (87%)
 Strand = Plus / Plus

                                                                       
Query: 50  atggtgaacgttccgaaaaccaagaagacctactgcaagaacaaggagtgcaagaagcac 109
           ||||||||||| || || |||||||||||||||||||||| ||||||||||| ||| |||
Sbjct: 17  atggtgaacgtacctaagaccaagaagacctactgcaagagcaaggagtgcaggaaacac 76

                                        
Query: 110 accctccacaaggtcacgcaatataagaa 138
           ||  | ||||||||||| || ||||||||
Sbjct: 77  actttgcacaaggtcacacagtataagaa 105

---

>dbj|AP003802.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1047_A06
          Length = 111673

 Score = 85.7 bits (43), Expect = 3e-14
 Identities = 79/91 (86%)
 Strand = Plus / Plus

                                                                          
Query: 52     ggtgaacgttccgaaaaccaagaagacctactgcaagaacaaggagtgcaagaagcacac 111
              ||||||||| || ||||| |||||||| ||||| ||||||||||| |||| |||||||||
Sbjct: 103991 ggtgaacgtgccaaaaactaagaagacttactgtaagaacaaggaatgcaggaagcacac 104050

                                             
Query: 112    cctccacaaggtcacgcaatataagaaagga 142
              ||| |||||||| || || || |||||||||
Sbjct: 104051 cctacacaaggttacccagtacaagaaagga 104081

---

>gb|DQ019457.1| Lilium longiflorum clone LP07 ribosomal protein-like mRNA, partial
           sequence
          Length = 526

 Score = 83.8 bits (42), Expect = 1e-13
 Identities = 57/62 (91%)
 Strand = Plus / Plus

                                                                       
Query: 50  atggtgaacgttccgaaaaccaagaagacctactgcaagaacaaggagtgcaagaagcac 109
           ||||||||||||||||| || |||||||| ||||||||||||||||  ||||||||||||
Sbjct: 58  atggtgaacgttccgaagacaaagaagacttactgcaagaacaaggcatgcaagaagcac 117

             
Query: 110 ac 111
           ||
Sbjct: 118 ac 119

---

>dbj|AK058924.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-009-C01, full
           insert sequence
          Length = 676

 Score = 79.8 bits (40), Expect = 2e-12
 Identities = 46/48 (95%)
 Strand = Plus / Plus

                                                           
Query: 79  ctactgcaagaacaaggagtgcaagaagcacaccctccacaaggtcac 126
           ||||||||||||||||||||||| |||||||||||| |||||||||||
Sbjct: 1   ctactgcaagaacaaggagtgcaggaagcacacccttcacaaggtcac 48

---

>gb|M62396.1|YSAQLAG C.maltosa ribosomal protein L41 (LEL41) gene, complete cds
          Length = 515

 Score = 77.8 bits (39), Expect = 8e-12
 Identities = 57/63 (90%)
 Strand = Plus / Plus

                                                                       
Query: 50  atggtgaacgttccgaaaaccaagaagacctactgcaagaacaaggagtgcaagaagcac 109
           |||||||||||||| || || ||||||||||||||||||  |||||||||||| ||||||
Sbjct: 35  atggtgaacgttcccaagacaaagaagacctactgcaagtccaaggagtgcaaaaagcac 94

              
Query: 110 acc 112
           |||
Sbjct: 95  acc 97

---

>dbj|AB226038.1| Aspergillus oryzae cDNA, contig sequence: AoEST2894
          Length = 1115

 Score = 69.9 bits (35), Expect = 2e-09
 Identities = 62/71 (87%)
 Strand = Plus / Plus

                                                                       
Query: 56  aacgttccgaaaaccaagaagacctactgcaagaacaaggagtgcaagaagcacaccctc 115
           |||||||||||||||     |||||||||||||  |||||||||||||||||||||||  
Sbjct: 548 aacgttccgaaaacccgccggacctactgcaagggcaaggagtgcaagaagcacacccag 607

                      
Query: 116 cacaaggtcac 126
           |||||||||||
Sbjct: 608 cacaaggtcac 618

---

>dbj|AP007171.1| Aspergillus oryzae RIB40 genomic DNA, SC011
          Length = 2505489

 Score = 69.9 bits (35), Expect = 2e-09
 Identities = 62/71 (87%)
 Strand = Plus / Plus

                                                                           
Query: 56      aacgttccgaaaaccaagaagacctactgcaagaacaaggagtgcaagaagcacaccctc 115
               |||||||||||||||     |||||||||||||  |||||||||||||||||||||||  
Sbjct: 2270408 aacgttccgaaaacccgccggacctactgcaagggcaaggagtgcaagaagcacacccag 2270467

                          
Query: 116     cacaaggtcac 126
               |||||||||||
Sbjct: 2270468 cacaaggtcac 2270478

---

>gb|AF398144.1|AF398144 Brassica rapa subsp. pekinensis 60S ribosomal protein L144 mRNA,
           partial cds
          Length = 518

 Score = 65.9 bits (33), Expect = 3e-08
 Identities = 75/89 (84%)
 Strand = Plus / Plus

                                                                       
Query: 50  atggtgaacgttccgaaaaccaagaagacctactgcaagaacaaggagtgcaagaagcac 109
           ||||||||| |||| || || ||||| || ||||||||||||||||| |||||||| || 
Sbjct: 43  atggtgaacattcccaagacaaagaaaacttactgcaagaacaaggaatgcaagaaacat 102

                                        
Query: 110 accctccacaaggtcacgcaatataagaa 138
           ||| | |||||||| || ||||| |||||
Sbjct: 103 accttgcacaaggttacccaatacaagaa 131

---

>gb|U64678.1|GHU64678 Gossypium hirsutum ribosomal protein L44 isoform b (RL44), complete
           cds
          Length = 542

 Score = 65.9 bits (33), Expect = 3e-08
 Identities = 75/89 (84%)
 Strand = Plus / Plus

                                                                       
Query: 50  atggtgaacgttccgaaaaccaagaagacctactgcaagaacaaggagtgcaagaagcac 109
           ||||||||||| || || || |||||||| || ||||||| ||||||||||| |||||||
Sbjct: 47  atggtgaacgtacctaagacgaagaagacttattgcaagagcaaggagtgcaggaagcac 106

                                        
Query: 110 accctccacaaggtcacgcaatataagaa 138
           ||  | |||||||| || || ||||||||
Sbjct: 107 actttgcacaaggttacacagtataagaa 135

---

>gb|AY674230.1| Ixodes pacificus clone IP_7_60_92_138_CLU ribosomal protein L44
           mRNA, complete cds
          Length = 318

 Score = 61.9 bits (31), Expect = 5e-07
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                      
Query: 96  agtgcaagaagcacaccctccacaaggtcacgcaatataagaa 138
           |||||||||||||||||||||||||||| ||||| || |||||
Sbjct: 44  agtgcaagaagcacaccctccacaaggtgacgcagtacaagaa 86

---

>gb|DQ066246.1| Ixodes scapularis isolate ISN-L-86 ribosomal protein L44 mRNA,
           complete cds
          Length = 318

 Score = 61.9 bits (31), Expect = 5e-07
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                      
Query: 96  agtgcaagaagcacaccctccacaaggtcacgcaatataagaa 138
           |||||||||||||||||||||||||||| || || ||||||||
Sbjct: 44  agtgcaagaagcacaccctccacaaggtgacacagtataagaa 86

---

>gb|AY497301.1| Phalaenopsis hybrid cultivar 60S ribosomal protein L44 (PL44-1)
           mRNA, complete cds
          Length = 708

 Score = 58.0 bits (29), Expect = 7e-06
 Identities = 74/89 (83%)
 Strand = Plus / Plus

                                                                       
Query: 50  atggtgaacgttccgaaaaccaagaagacctactgcaagaacaaggagtgcaagaagcac 109
           ||||||||||| || ||||| ||||| ||||| |||||||||||  | |||| |||||||
Sbjct: 161 atggtgaacgtcccaaaaacaaagaaaacctattgcaagaacaaacaatgcaggaagcac 220

                                        
Query: 110 accctccacaaggtcacgcaatataagaa 138
           || || ||||| || || ||||| |||||
Sbjct: 221 acgctgcacaaagttacccaatacaagaa 249

---

>gb|DQ284457.1| Solanum tuberosum clone 014B12 ribosomal protein L41-like mRNA,
           complete cds
          Length = 547

 Score = 56.0 bits (28), Expect = 3e-05
 Identities = 57/67 (85%)
 Strand = Plus / Plus

                                                                       
Query: 45  cgacnatggtgaacgttccgaaaaccaagaagacctactgcaagaacaaggagtgcaaga 104
           |||| |||||||||||||| ||||| |||||||| ||||| |||   || |||||||| |
Sbjct: 48  cgacaatggtgaacgttccaaaaactaagaagacatactgtaagtcgaaagagtgcaaaa 107

                  
Query: 105 agcacac 111
           |||||||
Sbjct: 108 agcacac 114

---

>ref|NM_113242.1| Arabidopsis thaliana structural constituent of ribosome AT3G23390
           mRNA, complete cds
          Length = 536

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 73/89 (82%)
 Strand = Plus / Plus

                                                                       
Query: 50  atggtgaacgttccgaaaaccaagaagacctactgcaagaacaaggagtgcaagaagcac 109
           ||||||||| |||| || || ||||| || ||||| ||||||||||| ||||| ||||| 
Sbjct: 53  atggtgaacattccaaagacaaagaacacttactgtaagaacaaggaatgcaaaaagcat 112

                                        
Query: 110 accctccacaaggtcacgcaatataagaa 138
           ||  | |||||||| || ||||| |||||
Sbjct: 113 actttgcacaaggttacccaatacaagaa 141

---

>ref|XM_658693.1| Aspergillus nidulans FGSC A4 60S ribosomal protein L44 (AN6181.2),
           mRNA
          Length = 321

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                
Query: 74  aagacctactgcaagaacaaggagtgcaagaagcacaccctccacaaggtcac 126
           ||||| |||||||||  |||||||||| | ||||||||||  |||||||||||
Sbjct: 25  aagacgtactgcaagggcaaggagtgccacaagcacacccagcacaaggtcac 77

---

>gb|AY062855.1| Arabidopsis thaliana 60S ribosomal protein L44-like (At3g23400;
           MLM24.12) mRNA, complete cds
          Length = 521

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 73/89 (82%)
 Strand = Plus / Plus

                                                                       
Query: 50  atggtgaacgttccgaaaaccaagaagacctactgcaagaacaaggagtgcaagaagcac 109
           ||||||||| |||| || || ||||| || ||||| ||||||||||| ||||| ||||| 
Sbjct: 51  atggtgaacattccaaagacaaagaacacttactgtaagaacaaggaatgcaaaaagcat 110

                                        
Query: 110 accctccacaaggtcacgcaatataagaa 138
           ||  | |||||||| || ||||| |||||
Sbjct: 111 actttgcacaaggttacccaatacaagaa 139

---

>gb|AY085174.1| Arabidopsis thaliana clone 13557 mRNA, complete sequence
          Length = 536

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 73/89 (82%)
 Strand = Plus / Plus

                                                                       
Query: 50  atggtgaacgttccgaaaaccaagaagacctactgcaagaacaaggagtgcaagaagcac 109
           ||||||||| |||| || || ||||| || ||||| ||||||||||| ||||| ||||| 
Sbjct: 53  atggtgaacattccaaagacaaagaacacttactgtaagaacaaggaatgcaaaaagcat 112

                                        
Query: 110 accctccacaaggtcacgcaatataagaa 138
           ||  | |||||||| || ||||| |||||
Sbjct: 113 actttgcacaaggttacccaatacaagaa 141

---

>gb|BT001193.1| Arabidopsis thaliana 60S ribosomal protein L44-like (At3g23400)
           mRNA, complete cds
          Length = 365

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 73/89 (82%)
 Strand = Plus / Plus

                                                                       
Query: 50  atggtgaacgttccgaaaaccaagaagacctactgcaagaacaaggagtgcaagaagcac 109
           ||||||||| |||| || || ||||| || ||||| ||||||||||| ||||| ||||| 
Sbjct: 1   atggtgaacattccaaagacaaagaacacttactgtaagaacaaggaatgcaaaaagcat 60

                                        
Query: 110 accctccacaaggtcacgcaatataagaa 138
           ||  | |||||||| || ||||| |||||
Sbjct: 61  actttgcacaaggttacccaatacaagaa 89

---

>ref|XM_959447.1| Neurospora crassa OR74A 60S RIBOSOMAL PROTEIN L44 (L41)
           (NCU00706.1) partial mRNA
          Length = 354

 Score = 46.1 bits (23), Expect = 0.028
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 104 aagcacaccctccacaaggtcac 126
           |||||||||||||||||||||||
Sbjct: 55  aagcacaccctccacaaggtcac 77

---

>ref|XM_324885.1| Neurospora crassa OR74A 60S RIBOSOMAL PROTEIN L44 (L41)
           (NCU00706.1) partial mRNA
          Length = 354

 Score = 46.1 bits (23), Expect = 0.028
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 104 aagcacaccctccacaaggtcac 126
           |||||||||||||||||||||||
Sbjct: 55  aagcacaccctccacaaggtcac 77

---

>gb|AF526255.1| Chlamys farreri clone iolscfcl357ct373cn393 ribosomal protein L44
           mRNA, complete cds
          Length = 382

 Score = 46.1 bits (23), Expect = 0.028
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 96  agtgcaagaagcacaccctccacaaggtcac 126
           ||||||||||||| ||||||||||| |||||
Sbjct: 56  agtgcaagaagcataccctccacaaagtcac 86

---

>dbj|AB015474.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MLM24
          Length = 87487

 Score = 46.1 bits (23), Expect = 0.028
 Identities = 71/87 (81%)
 Strand = Plus / Plus

                                                                         
Query: 52    ggtgaacgttccgaaaaccaagaagacctactgcaagaacaaggagtgcaagaagcacac 111
             ||||||| |||| || || ||||| || ||||| ||||||||||| ||||| ||||| ||
Sbjct: 48228 ggtgaacattccaaagacaaagaacacttactgtaagaacaaggaatgcaaaaagcatac 48287

                                        
Query: 112   cctccacaaggtcacgcaatataagaa 138
               | |||||||| || ||||| |||||
Sbjct: 48288 tttgcacaaggttacccaatacaagaa 48314

---

>ref|XM_390357.1| Gibberella zeae PH-1 chromosome 1 RL44_PICJA 60S RIBOSOMAL PROTEIN
           L44 (L41) (FG10181.1) partial mRNA
          Length = 351

 Score = 44.1 bits (22), Expect = 0.11
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                             
Query: 77  acctactgcaagaacaaggagtgcaagaagcacaccctccacaaggtcac 126
           ||||||||||||  ||||||||||   ||||||||||  |||||||||||
Sbjct: 58  acctactgcaagggcaaggagtgccgcaagcacacccagcacaaggtcac 107

---

>ref|XM_368698.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein
           (MG00546.4) partial mRNA
          Length = 360

 Score = 42.1 bits (21), Expect = 0.43
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 92  aaggagtgcaagaagcacacc 112
           |||||||||||||||||||||
Sbjct: 43  aaggagtgcaagaagcacacc 63

---

>gb|DQ063217.1| Candida glycerinogenes ribosomal protein L41 gene, complete cds
          Length = 706

 Score = 42.1 bits (21), Expect = 0.43
 Identities = 66/81 (81%)
 Strand = Plus / Plus

                                                                       
Query: 56  aacgttccgaaaaccaagaagacctactgcaagaacaaggagtgcaagaagcacaccctc 115
           |||||||| || ||||  ||||||||||| |||   ||| | || ||||||||||| |  
Sbjct: 392 aacgttccaaagaccagaaagacctactgtaagggtaagcaatgtaagaagcacactcaa 451

                                
Query: 116 cacaaggtcacgcaatataag 136
           |||||||||||||| ||||||
Sbjct: 452 cacaaggtcacgcagtataag 472

---

>emb|AJ605265.1| Platichthys flesus partial mRNA for ribosomal protein L36A
          (rpl36A gene)
          Length = 321

 Score = 42.1 bits (21), Expect = 0.43
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                   
Query: 50 atggtgaacgttccgaaaaccaagaagacctactgcaagaa 90
          ||||||||||| ||||| |||  || |||||||||||||||
Sbjct: 1  atggtgaacgtcccgaagacccggaggacctactgcaagaa 41

---

>gb|U80976.1|BMU80976 Brugia malayi ribosomal protein L44 (bm-rpl-44) mRNA, complete
          cds
          Length = 452

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 50 atggtgaacgttccgaaaac 69
          ||||||||||||||||||||
Sbjct: 33 atggtgaacgttccgaaaac 52

---

>gb|DQ244055.1| Hordeum vulgare reticulon mRNA, complete cds
          Length = 615

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 63  cgaaaaccaagaagaccta 81
           |||||||||||||||||||
Sbjct: 596 cgaaaaccaagaagaccta 614

---

>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 1       ccgcaggagaagcagcaga 19
               |||||||||||||||||||
Sbjct: 2314249 ccgcaggagaagcagcaga 2314231

---

>ref|NM_203601.1| Xenopus tropicalis myogenic factor 5 (MYF5), mRNA
          Length = 1190

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 74  aagacctactgcaagaaca 92
           |||||||||||||||||||
Sbjct: 521 aagacctactgcaagaaca 539

---

>gb|AC164547.4| Mus musculus BAC clone RP24-198D11 from chromosome 13, complete
             sequence
          Length = 177190

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 82    ctgcaagaacaaggagtgc 100
             |||||||||||||||||||
Sbjct: 12394 ctgcaagaacaaggagtgc 12412

---

>gb|BC061421.1| Xenopus tropicalis myogenic factor 5, mRNA (cDNA clone MGC:76020
           IMAGE:5384698), complete cds
          Length = 1190

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 74  aagacctactgcaagaaca 92
           |||||||||||||||||||
Sbjct: 521 aagacctactgcaagaaca 539

---

>gb|AC148814.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0077J22,
              complete sequence
          Length = 173903

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 23     gcggaggagagcttccagg 41
              |||||||||||||||||||
Sbjct: 126255 gcggaggagagcttccagg 126273

---

>ref|XM_583445.2| PREDICTED: Bos taurus hypothetical LOC538883 (LOC538883), mRNA
          Length = 1934

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 100 caagaagcacaccctccac 118
           |||||||||||||||||||
Sbjct: 523 caagaagcacaccctccac 505

---

>gb|AY050251.1| Xenopus tropicalis myogenic factor MYF-5 gene, complete cds
          Length = 7280

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 74   aagacctactgcaagaaca 92
            |||||||||||||||||||
Sbjct: 3166 aagacctactgcaagaaca 3184

---

>ref|XM_750055.1| Aspergillus fumigatus Af293 ribosomal protein L41 (Afu2g08130)
           partial mRNA
          Length = 828

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 40/47 (85%)
 Strand = Plus / Plus

                                                          
Query: 80  tactgcaagaacaaggagtgcaagaagcacaccctccacaaggtcac 126
           |||||||||  ||||||||||   ||||||||||  |||||||||||
Sbjct: 394 tactgcaagtccaaggagtgccgcaagcacacccagcacaaggtcac 440

---

>ref|XM_567391.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
           (CNJ03120) partial mRNA
          Length = 455

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 40/47 (85%)
 Strand = Plus / Plus

                                                          
Query: 77  acctactgcaagaacaaggagtgcaagaagcacaccctccacaaggt 123
           ||||||||||||   ||||  |||| ||||||||||| |||||||||
Sbjct: 42  acctactgcaagggtaaggcttgcaggaagcacaccccccacaaggt 88

---

>gb|AC159263.3| Mus musculus BAC clone RP24-66K21 from chromosome 13, complete sequence
          Length = 223738

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 82    ctgcaagaacaaggagtgc 100
             |||||||||||||||||||
Sbjct: 91409 ctgcaagaacaaggagtgc 91427

---

>dbj|BA000032.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 2, complete sequence
          Length = 1877212

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 2       cgcaggagaagcagcagac 20
               |||||||||||||||||||
Sbjct: 1091352 cgcaggagaagcagcagac 1091370

---

>gb|AC068781.19| Homo sapiens 3 BAC RP11-457K10 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 197893

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 75     agacctactgcaagaacaa 93
              |||||||||||||||||||
Sbjct: 135551 agacctactgcaagaacaa 135533

---

>emb|AJ579311.1|XTR579311 Silurana tropicalis mRNA for myf5 protein
          Length = 1320

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 74  aagacctactgcaagaaca 92
           |||||||||||||||||||
Sbjct: 613 aagacctactgcaagaaca 631

---

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 23      gcggaggagagcttccagg 41
               |||||||||||||||||||
Sbjct: 2679735 gcggaggagagcttccagg 2679753

---

>dbj|AK106485.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-104-H02, full
           insert sequence
          Length = 1361

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 23  gcggaggagagcttccagg 41
           |||||||||||||||||||
Sbjct: 936 gcggaggagagcttccagg 918

---

>emb|CR762266.2| Xenopus tropicalis finished cDNA, clone TGas127b01
          Length = 1162

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 74  aagacctactgcaagaaca 92
           |||||||||||||||||||
Sbjct: 513 aagacctactgcaagaaca 531


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,139,234
Number of Sequences: 3902068
Number of extensions: 1139234
Number of successful extensions: 89724
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 89494
Number of HSP's gapped (non-prelim): 229
length of query: 142
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 121
effective length of database: 17,151,101,840
effective search space: 2075283322640
effective search space used: 2075283322640
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)

---