ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | baal37n10 |
|---|---|
| Clone Library Name | barley_pub |
>PSAF_HORVU (P13192) Photosystem I reaction center subunit III, chloroplast| precursor (Light-harvesting complex I 17 kDa protein) (PSI-F) Length = 235 Score = 322 bits (826), Expect = 5e-88 Identities = 158/158 (100%), Positives = 158/158 (100%) Frame = +2 Query: 86 DIAGLTPCKESKAFAKREKQSVKKLNSSLKKYAPDSAPALAIQATIDKTKRRFENYGKFG 265 DIAGLTPCKESKAFAKREKQSVKKLNSSLKKYAPDSAPALAIQATIDKTKRRFENYGKFG Sbjct: 78 DIAGLTPCKESKAFAKREKQSVKKLNSSLKKYAPDSAPALAIQATIDKTKRRFENYGKFG 137 Query: 266 LLCGSDGLPHLIVSGDQRHWGEFITPGVLFLYIAGWIGWVGRSYLIAVSGEKKPAMREII 445 LLCGSDGLPHLIVSGDQRHWGEFITPGVLFLYIAGWIGWVGRSYLIAVSGEKKPAMREII Sbjct: 138 LLCGSDGLPHLIVSGDQRHWGEFITPGVLFLYIAGWIGWVGRSYLIAVSGEKKPAMREII 197 Query: 446 IDVELAARIIPRGFIWPVAAYRELINGDLVVDDADIGY 559 IDVELAARIIPRGFIWPVAAYRELINGDLVVDDADIGY Sbjct: 198 IDVELAARIIPRGFIWPVAAYRELINGDLVVDDADIGY 235
>PSAF_FLATR (P46486) Photosystem I reaction center subunit III, chloroplast| precursor (Light-harvesting complex I 17 kDa protein) (PSI-F) Length = 232 Score = 260 bits (664), Expect = 3e-69 Identities = 122/150 (81%), Positives = 137/150 (91%) Frame = +2 Query: 86 DIAGLTPCKESKAFAKREKQSVKKLNSSLKKYAPDSAPALAIQATIDKTKRRFENYGKFG 265 DI+GLTPCKESK FAKREKQS+KKL SSLK YAPDSAPALAI+AT++KTKRRF+NYGK G Sbjct: 79 DISGLTPCKESKQFAKREKQSLKKLESSLKLYAPDSAPALAIKATMEKTKRRFDNYGKQG 138 Query: 266 LLCGSDGLPHLIVSGDQRHWGEFITPGVLFLYIAGWIGWVGRSYLIAVSGEKKPAMREII 445 LLCGSDGLPHLIVSGDQRHWGEFITPG+LFLYIAGWIGWVGRSYLIA+ EKKP +EII Sbjct: 139 LLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDEKKPTQKEII 198 Query: 446 IDVELAARIIPRGFIWPVAAYRELINGDLV 535 IDV LA +++ RGF WPVAAYRE +NG+L+ Sbjct: 199 IDVPLATKLLFRGFSWPVAAYREYLNGELI 228
>PSAF_SPIOL (P12355) Photosystem I reaction center subunit III, chloroplast| precursor (Light-harvesting complex I 17 kDa protein) (PSI-F) Length = 231 Score = 258 bits (660), Expect = 9e-69 Identities = 121/150 (80%), Positives = 138/150 (92%) Frame = +2 Query: 86 DIAGLTPCKESKAFAKREKQSVKKLNSSLKKYAPDSAPALAIQATIDKTKRRFENYGKFG 265 DIAGLTPCKESK FAKREKQ++KKL +SLK YA DSAPALAI+AT++KTK+RF+NYGK+G Sbjct: 78 DIAGLTPCKESKQFAKREKQALKKLQASLKLYADDSAPALAIKATMEKTKKRFDNYGKYG 137 Query: 266 LLCGSDGLPHLIVSGDQRHWGEFITPGVLFLYIAGWIGWVGRSYLIAVSGEKKPAMREII 445 LLCGSDGLPHLIVSGDQRHWGEFITPG+LFLYIAGWIGWVGRSYLIA+ EKKP +EII Sbjct: 138 LLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDEKKPTQKEII 197 Query: 446 IDVELAARIIPRGFIWPVAAYRELINGDLV 535 IDV LA+ ++ RGF WPVAAYREL+NG+LV Sbjct: 198 IDVPLASSLLFRGFSWPVAAYRELLNGELV 227
>PSAF_GUITH (O78457) Photosystem I reaction center subunit III (PSI-F)| Length = 183 Score = 183 bits (464), Expect = 5e-46 Identities = 86/156 (55%), Positives = 108/156 (69%) Frame = +2 Query: 86 DIAGLTPCKESKAFAKREKQSVKKLNSSLKKYAPDSAPALAIQATIDKTKRRFENYGKFG 265 D+AGL PCK SK F +R SVKKL S L KY P++ P LA++ I+KTK RF YG G Sbjct: 23 DVAGLVPCKNSKEFQRRLDSSVKKLESRLSKYEPNTPPYLALETQINKTKNRFTQYGNAG 82 Query: 266 LLCGSDGLPHLIVSGDQRHWGEFITPGVLFLYIAGWIGWVGRSYLIAVSGEKKPAMREII 445 LLCG+DGLPHLI G H GEF+ PG+ FLYIAGWIGWVGR+Y+ S KP +EII Sbjct: 83 LLCGTDGLPHLIADGRWSHAGEFMVPGLFFLYIAGWIGWVGRNYVQFASQTDKPTEKEII 142 Query: 446 IDVELAARIIPRGFIWPVAAYRELINGDLVVDDADI 553 IDV +A I G+IWP AA++E +G+L+ + +I Sbjct: 143 IDVPVALSFISTGYIWPFAAFKEFTSGNLIAKEDEI 178
>PSAF_PORPU (P51193) Photosystem I reaction center subunit III (PSI-F)| Length = 185 Score = 179 bits (454), Expect = 7e-45 Identities = 84/156 (53%), Positives = 110/156 (70%) Frame = +2 Query: 86 DIAGLTPCKESKAFAKREKQSVKKLNSSLKKYAPDSAPALAIQATIDKTKRRFENYGKFG 265 ++AGL PCK+S AF KR SVKKL + L KY ++ PALA+ I+KTK RF YG+ G Sbjct: 25 EVAGLIPCKDSAAFNKRMVNSVKKLQARLAKYDANTPPALALNKQIEKTKTRFATYGRAG 84 Query: 266 LLCGSDGLPHLIVSGDQRHWGEFITPGVLFLYIAGWIGWVGRSYLIAVSGEKKPAMREII 445 LLCG+DGLPHLI G G+F+ PG+LFLYI GWIGWVGR YL++V+ KP +EII Sbjct: 85 LLCGTDGLPHLISDGRWSRAGDFVFPGLLFLYITGWIGWVGRGYLLSVAKTSKPTEKEII 144 Query: 446 IDVELAARIIPRGFIWPVAAYRELINGDLVVDDADI 553 +DV LA + + GF WP+AA++E +G L+ + DI Sbjct: 145 LDVPLAVKFMSSGFAWPLAAWQEFSSGQLIAPNDDI 180
>PSAF_ODOSI (P49483) Photosystem I reaction center subunit III (PSI-F)| Length = 185 Score = 175 bits (444), Expect = 1e-43 Identities = 86/156 (55%), Positives = 107/156 (68%) Frame = +2 Query: 86 DIAGLTPCKESKAFAKREKQSVKKLNSSLKKYAPDSAPALAIQATIDKTKRRFENYGKFG 265 DI GLT C ES AF KR K SVKKL + KY S PALA+Q I++T+ RF+ Y + Sbjct: 25 DIGGLTKCSESPAFEKRLKASVKKLEQRMGKYEAGSPPALALQQQIERTQARFDKYSRSE 84 Query: 266 LLCGSDGLPHLIVSGDQRHWGEFITPGVLFLYIAGWIGWVGRSYLIAVSGEKKPAMREII 445 LLCG+DGLPHLI G H EFI PG F+YI+GWIGWVGR YL AVS K P EII Sbjct: 85 LLCGTDGLPHLIADGRWSHAAEFILPGFGFIYISGWIGWVGRKYLRAVSTTKNPTESEII 144 Query: 446 IDVELAARIIPRGFIWPVAAYRELINGDLVVDDADI 553 I+V LA +I+ G+IWP++A++E I+ DLV D ++ Sbjct: 145 INVPLALKIMTTGYIWPISAWQEFISNDLVALDEEV 180
>PSAF_CYAPA (P48115) Photosystem I reaction center subunit III precursor| (PSI-F) Length = 186 Score = 175 bits (443), Expect = 1e-43 Identities = 83/156 (53%), Positives = 109/156 (69%) Frame = +2 Query: 86 DIAGLTPCKESKAFAKREKQSVKKLNSSLKKYAPDSAPALAIQATIDKTKRRFENYGKFG 265 D+AGL PC +S AF +R K + ++L + LKKY P SAPA A+Q IDKT++RF+ Y G Sbjct: 26 DVAGLIPCSQSDAFERRLKNTTQRLENRLKKYEPGSAPAEALQKQIDKTQQRFDKYRNSG 85 Query: 266 LLCGSDGLPHLIVSGDQRHWGEFITPGVLFLYIAGWIGWVGRSYLIAVSGEKKPAMREII 445 LLCG+DGLPHLI G H GEF PG+LFLYIAG+IGW GRSYL AV+ +EII Sbjct: 86 LLCGADGLPHLITDGRWSHAGEFTIPGLLFLYIAGFIGWSGRSYLQAVAASDNSTEKEII 145 Query: 446 IDVELAARIIPRGFIWPVAAYRELINGDLVVDDADI 553 ID+ +A + + +GF+WP+AA +E +G L D +I Sbjct: 146 IDIPVALQSVSKGFVWPLAALQEFSSGKLTARDEEI 181
>PSAF_CHLRE (P12356) Photosystem I reaction center subunit III, chloroplast| precursor (Light-harvesting complex I 17 kDa protein) (PSI-F) (P21 protein) Length = 227 Score = 171 bits (434), Expect = 1e-42 Identities = 89/160 (55%), Positives = 114/160 (71%), Gaps = 4/160 (2%) Frame = +2 Query: 86 DIAGLTPCKESKAFAKREKQSVKKLNSSLKKYAPDSAPALAIQATIDKTKRRFENYGKFG 265 DIAGLTPC ESKA+AK EK+ +K L LK+Y DSAPA+A++AT+++TK RF NY K G Sbjct: 63 DIAGLTPCSESKAYAKLEKKELKTLEKRLKQYEADSAPAVALKATMERTKARFANYAKAG 122 Query: 266 LLCGSDGLPHLI----VSGDQRHWGEFITPGVLFLYIAGWIGWVGRSYLIAVSGEKKPAM 433 LLCG+DGLPHLI ++ H GE P FLY+AG+IG+VGR YLIAV GE KP Sbjct: 123 LLCGNDGLPHLIADPGLALKYGHAGEVFIPTFGFLYVAGYIGYVGRQYLIAVKGEAKPTD 182 Query: 434 REIIIDVELAARIIPRGFIWPVAAYRELINGDLVVDDADI 553 +EIIIDV LA ++ +G WP+AA +EL G L+ + +I Sbjct: 183 KEIIIDVPLATKLAWQGAGWPLAAVQELQRGTLLEKEENI 222
>PSAF_CYACA (Q9TLW6) Photosystem I reaction center subunit III (PSI-F)| Length = 187 Score = 146 bits (369), Expect = 5e-35 Identities = 72/152 (47%), Positives = 92/152 (60%) Frame = +2 Query: 98 LTPCKESKAFAKREKQSVKKLNSSLKKYAPDSAPALAIQATIDKTKRRFENYGKFGLLCG 277 LTPC+ S F R ++KKL + L Y +S +I+ I+KTK RF+ Y K LLCG Sbjct: 31 LTPCENSAQFQARLNNNIKKLENKLTYYKQNSQEYTSIKQQIEKTKIRFDKYAKSSLLCG 90 Query: 278 SDGLPHLIVSGDQRHWGEFITPGVLFLYIAGWIGWVGRSYLIAVSGEKKPAMREIIIDVE 457 DGLPHLI GD +H GEF P VLF+YIAGWIGW G+ YL KP EIIID+ Sbjct: 91 EDGLPHLITDGDWQHSGEFFIPSVLFIYIAGWIGWAGKGYLQYSKTLTKPNENEIIIDLP 150 Query: 458 LAARIIPRGFIWPVAAYRELINGDLVVDDADI 553 A + + GF WP+ A +E NG L+ + +I Sbjct: 151 RALKYMFSGFAWPILALKEFKNGSLLASNDEI 182
>PSAF_SYNEN (P0A402) Photosystem I reaction center subunit III precursor| (PSI-F) Length = 164 Score = 135 bits (341), Expect = 9e-32 Identities = 74/158 (46%), Positives = 93/158 (58%), Gaps = 2/158 (1%) Frame = +2 Query: 86 DIAGLTPCKESKAFAKREKQSVKKLNSSLKKYAPDSAPALAIQATIDKT--KRRFENYGK 259 D+AGL PCK+S AF KR A A+ T D ++RFE Y + Sbjct: 24 DVAGLVPCKDSPAFQKRA--------------------AAAVNTTADPASGQKRFERYSQ 63 Query: 260 FGLLCGSDGLPHLIVSGDQRHWGEFITPGVLFLYIAGWIGWVGRSYLIAVSGEKKPAMRE 439 LCG DGLPHL+V G G+F+ P VLFLYIAGWIGWVGR+YLIAV + +E Sbjct: 64 --ALCGEDGLPHLVVDGRLSRAGDFLIPSVLFLYIAGWIGWVGRAYLIAVRNSGEANEKE 121 Query: 440 IIIDVELAARIIPRGFIWPVAAYRELINGDLVVDDADI 553 IIIDV LA + + GF WP+AA +EL +G+L D +I Sbjct: 122 IIIDVPLAIKCMLTGFAWPLAALKELASGELTAKDNEI 159
>PSAF_SYNEL (P0A401) Photosystem I reaction center subunit III precursor| (PSI-F) Length = 164 Score = 135 bits (341), Expect = 9e-32 Identities = 74/158 (46%), Positives = 93/158 (58%), Gaps = 2/158 (1%) Frame = +2 Query: 86 DIAGLTPCKESKAFAKREKQSVKKLNSSLKKYAPDSAPALAIQATIDKT--KRRFENYGK 259 D+AGL PCK+S AF KR A A+ T D ++RFE Y + Sbjct: 24 DVAGLVPCKDSPAFQKRA--------------------AAAVNTTADPASGQKRFERYSQ 63 Query: 260 FGLLCGSDGLPHLIVSGDQRHWGEFITPGVLFLYIAGWIGWVGRSYLIAVSGEKKPAMRE 439 LCG DGLPHL+V G G+F+ P VLFLYIAGWIGWVGR+YLIAV + +E Sbjct: 64 --ALCGEDGLPHLVVDGRLSRAGDFLIPSVLFLYIAGWIGWVGRAYLIAVRNSGEANEKE 121 Query: 440 IIIDVELAARIIPRGFIWPVAAYRELINGDLVVDDADI 553 IIIDV LA + + GF WP+AA +EL +G+L D +I Sbjct: 122 IIIDVPLAIKCMLTGFAWPLAALKELASGELTAKDNEI 159
>PSAF_SYNP6 (P31083) Photosystem I reaction center subunit III precursor| (PSI-F) Length = 159 Score = 135 bits (339), Expect = 1e-31 Identities = 73/156 (46%), Positives = 91/156 (58%) Frame = +2 Query: 86 DIAGLTPCKESKAFAKREKQSVKKLNSSLKKYAPDSAPALAIQATIDKTKRRFENYGKFG 265 D+AGLTPC ES F +R A A + K RFENY + Sbjct: 24 DVAGLTPCSESPRFIQR-----------------------AEAAATPQAKARFENYSQ-- 58 Query: 266 LLCGSDGLPHLIVSGDQRHWGEFITPGVLFLYIAGWIGWVGRSYLIAVSGEKKPAMREII 445 LCG+DGLPHLIV G H G+FI P +LFLYIAGWIGWVGRSYL A+ +K A +EI+ Sbjct: 59 ALCGADGLPHLIVDGRLDHAGDFIIPSLLFLYIAGWIGWVGRSYLQAIKSDKDAAGKEIV 118 Query: 446 IDVELAARIIPRGFIWPVAAYRELINGDLVVDDADI 553 IDV LA + GF WP+AA++E +G L+ +I Sbjct: 119 IDVPLAVKFSLTGFAWPLAAFQEFSSGKLLAKADEI 154
>PSAF_SYNY3 (P29256) Photosystem I reaction center subunit III precursor| (PSI-F) Length = 165 Score = 127 bits (318), Expect = 4e-29 Identities = 68/156 (43%), Positives = 90/156 (57%) Frame = +2 Query: 86 DIAGLTPCKESKAFAKREKQSVKKLNSSLKKYAPDSAPALAIQATIDKTKRRFENYGKFG 265 D A LTPC E+ A+ + K + N P+S K R E Y Sbjct: 25 DFANLTPCSENPAYLAKSKNFLNTTND------PNSG------------KIRAERYAS-- 64 Query: 266 LLCGSDGLPHLIVSGDQRHWGEFITPGVLFLYIAGWIGWVGRSYLIAVSGEKKPAMREII 445 LCG +G PHLIV G H G+F+ P +LFLYIAGWIGWVGRSYLI + K P M+E++ Sbjct: 65 ALCGPEGYPHLIVDGRFTHAGDFLIPSILFLYIAGWIGWVGRSYLIEIRESKNPEMQEVV 124 Query: 446 IDVELAARIIPRGFIWPVAAYRELINGDLVVDDADI 553 I+V LA + + GF+WP+AA E +G LV+ D++I Sbjct: 125 INVPLAIKKMLGGFLWPLAAVGEYTSGKLVMKDSEI 160
>PSAF_ANAVT (P31091) Photosystem I reaction center subunit III precursor| (PSI-F) Length = 164 Score = 117 bits (293), Expect = 3e-26 Identities = 65/154 (42%), Positives = 88/154 (57%) Frame = +2 Query: 92 AGLTPCKESKAFAKREKQSVKKLNSSLKKYAPDSAPALAIQATIDKTKRRFENYGKFGLL 271 A LTPC E+ AF +L K A ++ A ++RFE Y + L Sbjct: 26 ADLTPCAENPAF------------QALAKNARNTT------ADPQSGQKRFERYSQ--AL 65 Query: 272 CGSDGLPHLIVSGDQRHWGEFITPGVLFLYIAGWIGWVGRSYLIAVSGEKKPAMREIIID 451 CG +G PHLIV G G+F+ P +LFLYIAGWIGWVGR+YL A+ + +EI +D Sbjct: 66 CGPEGYPHLIVDGRLDRAGDFLIPSILFLYIAGWIGWVGRAYLQAIKKDSDTEQKEIQLD 125 Query: 452 VELAARIIPRGFIWPVAAYRELINGDLVVDDADI 553 + LA II GF WP AA +EL++G+L D++I Sbjct: 126 LGLALPIIATGFAWPAAAVKELLSGELTAKDSEI 159
>PSAF_ANASP (P58564) Photosystem I reaction center subunit III precursor| (PSI-F) Length = 164 Score = 116 bits (291), Expect = 5e-26 Identities = 64/154 (41%), Positives = 88/154 (57%) Frame = +2 Query: 92 AGLTPCKESKAFAKREKQSVKKLNSSLKKYAPDSAPALAIQATIDKTKRRFENYGKFGLL 271 A LTPC E+ AF +L K A ++ A ++RFE Y + L Sbjct: 26 ADLTPCAENPAF------------QALAKNARNTT------ADPQSGQKRFERYSQ--AL 65 Query: 272 CGSDGLPHLIVSGDQRHWGEFITPGVLFLYIAGWIGWVGRSYLIAVSGEKKPAMREIIID 451 CG +G PHLIV G G+F+ P +LFLYIAGWIGWVGR+YL A+ + +EI +D Sbjct: 66 CGPEGYPHLIVDGRLDRAGDFLIPSILFLYIAGWIGWVGRAYLQAIKKDSDTEQKEIQLD 125 Query: 452 VELAARIIPRGFIWPVAAYRELINGDLVVDDADI 553 + +A II GF WP AA +EL++G+L D++I Sbjct: 126 LGIALPIIATGFAWPAAAVKELLSGELTAKDSEI 159
>PSAF_MASLA (O31127) Photosystem I reaction center subunit III precursor| (PSI-F) Length = 165 Score = 113 bits (282), Expect = 6e-25 Identities = 63/155 (40%), Positives = 85/155 (54%), Gaps = 1/155 (0%) Frame = +2 Query: 92 AGLTPCKESKAFAKREKQSVKKLNSSLKKYAPDSAPALAIQATIDKTKRRFENYGKFGLL 271 A L PC ES AF +R + A A + K+RFE Y + L Sbjct: 26 ADLVPCSESPAFQQRAQV------------------ARNTTADPESGKKRFERYSQ--AL 65 Query: 272 CGSDGLPHLIVSGDQRHWGEFITPGVLFLYIAGWIGWVGRSYLIAVSGE-KKPAMREIII 448 CG +GLPHLIV G H G+F+ P +LFLYIAGWIGWVGR+YL + + +EI I Sbjct: 66 CGPEGLPHLIVDGRLDHAGDFLIPSILFLYIAGWIGWVGRAYLQTIKKQGSNVEQKEIQI 125 Query: 449 DVELAARIIPRGFIWPVAAYRELINGDLVVDDADI 553 ++ +A I+ GF WP AA +E ++G+L D +I Sbjct: 126 ELPIALPIMLSGFAWPAAAIKEFLSGELTAKDEEI 160
>PSAF_PROMA (Q9X7I4) Photosystem I reaction center subunit III precursor| (PSI-F) Length = 183 Score = 97.4 bits (241), Expect = 3e-20 Identities = 54/125 (43%), Positives = 71/125 (56%), Gaps = 9/125 (7%) Frame = +2 Query: 206 AIQATIDKTKRRFENYGKFGLLCGSDGLPHLIVSG---------DQRHWGEFITPGVLFL 358 A QAT K RFE Y K CG DGLPHL+++ ++ H G+ + PG +F+ Sbjct: 55 ASQATTPKDIARFERYSKAS--CGDDGLPHLVIAATIEPWGALANRHHEGDILIPGHIFI 112 Query: 359 YIAGWIGWVGRSYLIAVSGEKKPAMREIIIDVELAARIIPRGFIWPVAAYRELINGDLVV 538 Y+AG IGW GR YL A K PA EIIID LA + + +G WPV A ++ +GDL Sbjct: 113 YVAGIIGWSGREYLRASKKTKNPAENEIIIDFALARQCLIKGAAWPVEANKQGRSGDLRE 172 Query: 539 DDADI 553 D +I Sbjct: 173 KDENI 177
>PSAF_GLOVI (Q7NH05) Photosystem I reaction center subunit III precursor| (PSI-F) Length = 181 Score = 93.2 bits (230), Expect = 6e-19 Identities = 58/146 (39%), Positives = 79/146 (54%) Frame = +2 Query: 107 CKESKAFAKREKQSVKKLNSSLKKYAPDSAPALAIQATIDKTKRRFENYGKFGLLCGSDG 286 CK+ A+ + + Q ++ + +K D P +A TK++FE Y CG DG Sbjct: 41 CKDVPAYQELKTQRLE----AAQKAQADGKPVTFNEAG---TKQKFERYDT--AYCGQDG 91 Query: 287 LPHLIVSGDQRHWGEFITPGVLFLYIAGWIGWVGRSYLIAVSGEKKPAMREIIIDVELAA 466 PHLI SG G+F+ P VLFL+IAG +GW GR YL E K EIIID+ A Sbjct: 92 YPHLITSGQLDRAGDFLIPSVLFLWIAGALGWAGRLYL----AESKGPEDEIIIDLPKAI 147 Query: 467 RIIPRGFIWPVAAYRELINGDLVVDD 544 + + G IWPV A ELI+G + V + Sbjct: 148 KCLLLGLIWPVQAIPELISGKIRVPE 173
>PSAF_CUCSA (P42048) Photosystem I reaction center subunit III (Photosystem I| 18.5 kDa protein) (PSI-F) (PS I subunit 7) (Fragment) Length = 26 Score = 42.4 bits (98), Expect = 0.001 Identities = 19/25 (76%), Positives = 20/25 (80%) Frame = +2 Query: 86 DIAGLTPCKESKAFAKREKQSVKKL 160 DI+GLTPCKESK F KREKQ K L Sbjct: 1 DISGLTPCKESKQFXKREKQQXKXL 25
>PSAF_PEA (P20119) Photosystem I reaction center subunit III| (Light-harvesting complex I 17 kDa protein) (PSI-F) (Fragment) Length = 20 Score = 38.9 bits (89), Expect = 0.014 Identities = 17/19 (89%), Positives = 18/19 (94%) Frame = +2 Query: 89 IAGLTPCKESKAFAKREKQ 145 I+GLTPCKESK FAKREKQ Sbjct: 2 ISGLTPCKESKQFAKREKQ 20
>PSAF_MAIZE (P13193) Photosystem I reaction center subunit III| (Light-harvesting complex I 17 kDa protein) (PSI-F) (Fragment) Length = 20 Score = 33.1 bits (74), Expect = 0.78 Identities = 16/18 (88%), Positives = 16/18 (88%) Frame = +2 Query: 89 IAGLTPCKESKAFAKREK 142 IAGLTP KESKAFAK EK Sbjct: 2 IAGLTPPKESKAFAKXEK 19
>PHC1_MOUSE (Q64028) Polyhomeotic-like protein 1 (mPH1) (Early development| regulatory protein 1) (RAE-28) Length = 1012 Score = 30.8 bits (68), Expect = 3.9 Identities = 15/45 (33%), Positives = 25/45 (55%) Frame = -2 Query: 387 PTQPIQPAM*RKSTPGVMNSPQCRWSPLTMRWGRPSEPQSRPNLP 253 PTQ + P+ ++ ++ P + SPLT+ P EP S+P +P Sbjct: 462 PTQQVPPSQSQQQAQTLVVQPMLQSSPLTL----PPEPTSKPPIP 502
>EFTS_RALSO (Q8XZJ0) Elongation factor Ts (EF-Ts)| Length = 292 Score = 30.0 bits (66), Expect = 6.6 Identities = 17/42 (40%), Positives = 25/42 (59%) Frame = -1 Query: 427 GLLLAADGDEVAASDPADPAGDVEEEHAGGDELAPVPLVAAD 302 G+++A DGDEVAA D A A ++ DE+ P L+A + Sbjct: 159 GVMVAFDGDEVAAKDVAMHAAAMKPVALSSDEV-PAELIAKE 199
>BTBD4_HUMAN (Q86UZ6) BTB/POZ domain-containing protein 4 (Zinc finger protein| 340) Length = 589 Score = 30.0 bits (66), Expect = 6.6 Identities = 15/36 (41%), Positives = 18/36 (50%) Frame = -1 Query: 406 GDEVAASDPADPAGDVEEEHAGGDELAPVPLVAADD 299 GD DP DP G+ EE + LAP + ADD Sbjct: 530 GDGPYLEDPEDPRGEAEELGEDDEGLAPEDALLADD 565
>HIS82_BORPE (Q7VSZ0) Histidinol-phosphate aminotransferase 2 (EC 2.6.1.9)| (Imidazole acetol-phosphate transaminase 2) Length = 365 Score = 30.0 bits (66), Expect = 6.6 Identities = 39/144 (27%), Positives = 60/144 (41%), Gaps = 18/144 (12%) Frame = +2 Query: 170 LKKYAPDSAPALAIQATIDKTKRRFENYGKFGLLCG--SDGLPHLIVSGDQRHWGEFITP 343 L +Y + PAL Q ++ FE + GLL G SD L HLI+ ++P Sbjct: 61 LNRYPAAANPALQAQV-----RQAFEVPAQAGLLFGNGSDELIHLIIQACCEPGDTVLSP 115 Query: 344 GVLFLYIAGWIGWVGRSYLIAVSGEKKPAMREIIIDVELAA------RII-------PRG 484 F+Y R G A E+ + LAA +++ P G Sbjct: 116 WPSFVYF----DMAARLSHARFVGVPLTAGLELDLPATLAAIEAHQPKVVFLALPNNPTG 171 Query: 485 FIWPVAAYRELIN---GDLVVDDA 547 +WP AA R +++ G +V+D+A Sbjct: 172 DLWPDAAVRAILDAAPGLVVLDEA 195
>HIS82_BORPA (Q7W2Y3) Histidinol-phosphate aminotransferase 2 (EC 2.6.1.9)| (Imidazole acetol-phosphate transaminase 2) Length = 365 Score = 30.0 bits (66), Expect = 6.6 Identities = 39/144 (27%), Positives = 60/144 (41%), Gaps = 18/144 (12%) Frame = +2 Query: 170 LKKYAPDSAPALAIQATIDKTKRRFENYGKFGLLCG--SDGLPHLIVSGDQRHWGEFITP 343 L +Y + PAL Q ++ FE + GLL G SD L HLI+ ++P Sbjct: 61 LNRYPAAANPALQAQV-----RQAFEVPAQAGLLFGNGSDELIHLIIQACCEPGDTVLSP 115 Query: 344 GVLFLYIAGWIGWVGRSYLIAVSGEKKPAMREIIIDVELAA------RII-------PRG 484 F+Y R G A E+ + LAA +++ P G Sbjct: 116 WPSFVYF----DMAARLSHARFVGVPLTAGLELDLPATLAAIEAHQPKVVFLALPNNPTG 171 Query: 485 FIWPVAAYRELIN---GDLVVDDA 547 +WP AA R +++ G +V+D+A Sbjct: 172 GLWPDAAVRAILDAAPGLVVLDEA 195
>HIS82_BORBR (Q7WDY3) Histidinol-phosphate aminotransferase 2 (EC 2.6.1.9)| (Imidazole acetol-phosphate transaminase 2) Length = 365 Score = 30.0 bits (66), Expect = 6.6 Identities = 39/144 (27%), Positives = 60/144 (41%), Gaps = 18/144 (12%) Frame = +2 Query: 170 LKKYAPDSAPALAIQATIDKTKRRFENYGKFGLLCG--SDGLPHLIVSGDQRHWGEFITP 343 L +Y + PAL Q ++ FE + GLL G SD L HLI+ ++P Sbjct: 61 LNRYPAAANPALQAQV-----RQAFEVPAQAGLLFGNGSDELIHLIIQACCEPGDTVLSP 115 Query: 344 GVLFLYIAGWIGWVGRSYLIAVSGEKKPAMREIIIDVELAA------RII-------PRG 484 F+Y R G A E+ + LAA +++ P G Sbjct: 116 WPSFVYF----DMAARLSHARFVGVPLTAGLELDLPATLAAIEAHQPKVVFLALPNNPTG 171 Query: 485 FIWPVAAYRELIN---GDLVVDDA 547 +WP AA R +++ G +V+D+A Sbjct: 172 GLWPDAAVRAILDAAPGLVVLDEA 195 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 61,095,363 Number of Sequences: 219361 Number of extensions: 1123708 Number of successful extensions: 4535 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 4238 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4521 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6541540170 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
