ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal37n10 |
|---|---|
| Clone Library Name | barley_pub |
>gb|U08135.1|HVU08135 Hordeum vulgare photosystem-I PSI-F subunit precursor mRNA, complete cds Length = 990 Score = 1300 bits (656), Expect = 0.0 Identities = 662/664 (99%) Strand = Plus / Plus Query: 10 gaccttctcggccgcgctggcgctctcctccgtgctcctctcctcggccgccacctcccc 69 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 205 gaccttctcggccgcgctggcgctctcctccgtgctcctctcctcggccgccacctcccc 264 Query: 70 gccccccgcggccgccgacatcgccggcctgaccccgtgcaaggagtccaaggccttcgc 129 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 265 gccccccgcggccgccgacatcgccggcctgaccccctgcaaggagtccaaggccttcgc 324 Query: 130 caagcgggagaagcagtcggtcaagaagctcaactcgtcgctcaagaagtacgcgcccga 189 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 325 caagcgggagaagcagtcggtcaagaagctcaactcgtcgctcaagaagtacgcgcccga 384 Query: 190 ctccgccccggcgctcgccatccaggccaccatcgacaagaccaagcgccggttcgagaa 249 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 385 ctccgccccggcgctcgccatccaggccaccatcgacaagaccaagcgccggttcgagaa 444 Query: 250 ctacggcaagttcggcctgctctgcggctccgacggcctgccccacctcatcgtcagcgg 309 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 445 ctacggcaagttcggcctgctctgcggctccgacggcctgccccacctcatcgtcagcgg 504 Query: 310 cgaccagcggcactggggcgagttcatcacccccggcgtgctcttcctctacatcgccgg 369 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 505 cgaccagcggcactggggcgagttcatcacccccggcgtgctcttcctctacatcgccgg 564 Query: 370 ctggatcggctgggtcggacgcagctacctcatcgccgtcagcggcgagaagaagcccgc 429 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 565 ctggatcggctgggtcggacgcagctacctcatcgccgtcagcggcgagaagaagcccgc 624 Query: 430 catgagggagatcatcatcgacgtcgagctcgccgccaggatcatccccaggggcttcat 489 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 625 catgagggagatcatcatcgacgtcgagctcgccgccaggatcatccccaggggcttcat 684 Query: 490 ctggcccgtcgccgcataccgcgagctcatcaacggcgacctcgtcgtcgacgacgccga 549 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 685 ctggcccgtcgccgcataccgcgagctcatcaacggcgacctcgtcgtcgacgacgccga 744 Query: 550 catcggctactaactagctgccatgcgtgcgtggttggctagtcggtcccaagtcagatg 609 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 745 catcggctactaagtagctgccatgcgtgcgtggttggctagtcggtcccaagtcagatg 804 Query: 610 ggcagcggaggatgagggcttgtggtgtcgatctgtgtgggcttggtgtaggagctgata 669 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 805 ggcagcggaggatgagggcttgtggtgtcgatctgtgtgggcttggtgtaggagctgata 864 Query: 670 ggat 673 |||| Sbjct: 865 ggat 868
>gb|AY103687.1| Zea mays PCO106710 mRNA sequence Length = 1242 Score = 724 bits (365), Expect = 0.0 Identities = 510/557 (91%), Gaps = 1/557 (0%) Strand = Plus / Plus Query: 14 ttctcggccgcgctggcgctctcctccgtgctcctctcctcggccgccacctccccgccc 73 ||||||||||||||||| || || || ||||| ||||||||||||||||||||||| ||| Sbjct: 247 ttctcggccgcgctggctctgtcgtcggtgcttctctcctcggccgccacctcccctccc 306 Query: 74 cccgcggccgccgacatcgccggcctgaccccgtgcaaggagtccaaggccttcgccaag 133 ||||||||||| |||||||| || |||||||||||||||||||||||||| ||||||||| Sbjct: 307 cccgcggccgctgacatcgcggggctgaccccgtgcaaggagtccaaggcgttcgccaag 366 Query: 134 cgggagaagcagtcggtcaagaagctcaactcgtcgctcaagaagtacgcgcccgactcc 193 || |||||| | ||| |||||||||||| | |||||||||||||||||||||||||| | Sbjct: 367 cgcgagaagaactcgatcaagaagctcaccgcgtcgctcaagaagtacgcgcccgacagc 426 Query: 194 gccccggcgctcgccatccaggccaccatcgacaagaccaagcgccggttcgagaactac 253 |||||||| ||||||||| | ||||||||||| ||||||||||| ||||||||||||||| Sbjct: 427 gccccggccctcgccatcaacgccaccatcgagaagaccaagcggcggttcgagaactac 486 Query: 254 ggcaagttcggcctgctctgcggctccgacggcctgccccacctcatcgtcagcggcgac 313 |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| Sbjct: 487 ggcaagttcggcctgctctgcggcgccgacggcctgccgcacctcatcgtcagcggcgac 546 Query: 314 cagcggcactggggcgagttcatcacccccggcgtgctcttcctctacatcgccggctgg 373 ||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||| ||| Sbjct: 547 cagcggcactggggcgagttcgtcaccccgggcctgctcttcctctacatcgccgggtgg 606 Query: 374 atcggctgggtcggacgcagctacctcatcgccgtcagcggcgagaagaagcccgccatg 433 ||||| |||||||| | ||||||||||||||| |||||||||||||||||||||||||| Sbjct: 607 atcgggtgggtcggcaggagctacctcatcgccatcagcggcgagaagaagcccgccatg 666 Query: 434 agggagatcatcatcgacgtcgagctcgccgccaggatcatccccaggggcttcatctgg 493 |||||||||||||||||||||||||||||| || | || |||||||||| ||||||||| Sbjct: 667 agggagatcatcatcgacgtcgagctcgccacccgcctcctccccagggggttcatctgg 726 Query: 494 cccgtcgccgcataccgcgagctcatcaacggcgacctcgtcgtcgacgacgccgacatc 553 |||||||| || |||||||||||||||||||| |||||||||||||||||| |||||| Sbjct: 727 cccgtcgcggcctaccgcgagctcatcaacggagacctcgtcgtcgacgacaaggacatc 786 Query: 554 ggctactaactagctgc 570 ||||||| ||||||||| Sbjct: 787 ggctact-actagctgc 802
>ref|NM_184976.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1038 Score = 720 bits (363), Expect = 0.0 Identities = 501/547 (91%) Strand = Plus / Plus Query: 14 ttctcggccgcgctggcgctctcctccgtgctcctctcctcggccgccacctccccgccc 73 ||||| || ||||||||||| ||||| ||||| ||||||||||| || || || |||||| Sbjct: 232 ttctccgcggcgctggcgctgtcctcggtgctgctctcctcggcggcgacgtcgccgccc 291 Query: 74 cccgcggccgccgacatcgccggcctgaccccgtgcaaggagtccaaggccttcgccaag 133 ||||| ||||||||||||||||| ||||| |||||||||||||||||||| ||||| ||| Sbjct: 292 cccgccgccgccgacatcgccgggctgacgccgtgcaaggagtccaaggcgttcgcgaag 351 Query: 134 cgggagaagcagtcggtcaagaagctcaactcgtcgctcaagaagtacgcgcccgactcc 193 |||||||||||||| ||||||||||| | ||||||||||||||||||||||| |||||| Sbjct: 352 cgggagaagcagtccatcaagaagctccagtcgtcgctcaagaagtacgcgccggactcc 411 Query: 194 gccccggcgctcgccatccaggccaccatcgacaagaccaagcgccggttcgagaactac 253 || ||||||||||||||| | ||||||||||| ||||| |||||||| |||||||||||| Sbjct: 412 gcgccggcgctcgccatcaacgccaccatcgagaagacgaagcgccgcttcgagaactac 471 Query: 254 ggcaagttcggcctgctctgcggctccgacggcctgccccacctcatcgtcagcggcgac 313 |||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||| Sbjct: 472 ggcaagttcggcctgctctgcggcgccgacggcctcccgcacctcatcgtcagcggcgac 531 Query: 314 cagcggcactggggcgagttcatcacccccggcgtgctcttcctctacatcgccggctgg 373 ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 532 cagcggcactggggcgagttcatcaccccgggcttgctcttcctctacatcgccggctgg 591 Query: 374 atcggctgggtcggacgcagctacctcatcgccgtcagcggcgagaagaagcccgccatg 433 |||||||||||||| | ||||||||||||||| ||||||||||||||||||| |||||| Sbjct: 592 atcggctgggtcggcaggagctacctcatcgccatcagcggcgagaagaagccggccatg 651 Query: 434 agggagatcatcatcgacgtcgagctcgccgccaggatcatccccaggggcttcatctgg 493 ||||||||||||||||||||||||||||||| || | || |||| ||||| ||||||||| Sbjct: 652 agggagatcatcatcgacgtcgagctcgccgtcaagctcctcccgagggggttcatctgg 711 Query: 494 cccgtcgccgcataccgcgagctcatcaacggcgacctcgtcgtcgacgacgccgacatc 553 ||||||||||| ||||| |||||||||| |||| ||||||||||||||||||| |||||| Sbjct: 712 cccgtcgccgcctaccgtgagctcatcaccggcaacctcgtcgtcgacgacgctgacatc 771 Query: 554 ggctact 560 ||||||| Sbjct: 772 ggctact 778
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 720 bits (363), Expect = 0.0 Identities = 501/547 (91%) Strand = Plus / Minus Query: 14 ttctcggccgcgctggcgctctcctccgtgctcctctcctcggccgccacctccccgccc 73 ||||| || ||||||||||| ||||| ||||| ||||||||||| || || || |||||| Sbjct: 31970020 ttctccgcggcgctggcgctgtcctcggtgctgctctcctcggcggcgacgtcgccgccc 31969961 Query: 74 cccgcggccgccgacatcgccggcctgaccccgtgcaaggagtccaaggccttcgccaag 133 ||||| ||||||||||||||||| ||||| |||||||||||||||||||| ||||| ||| Sbjct: 31969960 cccgccgccgccgacatcgccgggctgacgccgtgcaaggagtccaaggcgttcgcgaag 31969901 Query: 134 cgggagaagcagtcggtcaagaagctcaactcgtcgctcaagaagtacgcgcccgactcc 193 |||||||||||||| ||||||||||| | ||||||||||||||||||||||| |||||| Sbjct: 31969900 cgggagaagcagtccatcaagaagctccagtcgtcgctcaagaagtacgcgccggactcc 31969841 Query: 194 gccccggcgctcgccatccaggccaccatcgacaagaccaagcgccggttcgagaactac 253 || ||||||||||||||| | ||||||||||| ||||| |||||||| |||||||||||| Sbjct: 31969840 gcgccggcgctcgccatcaacgccaccatcgagaagacgaagcgccgcttcgagaactac 31969781 Query: 254 ggcaagttcggcctgctctgcggctccgacggcctgccccacctcatcgtcagcggcgac 313 |||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||| Sbjct: 31969780 ggcaagttcggcctgctctgcggcgccgacggcctcccgcacctcatcgtcagcggcgac 31969721 Query: 314 cagcggcactggggcgagttcatcacccccggcgtgctcttcctctacatcgccggctgg 373 ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 31969720 cagcggcactggggcgagttcatcaccccgggcttgctcttcctctacatcgccggctgg 31969661 Query: 374 atcggctgggtcggacgcagctacctcatcgccgtcagcggcgagaagaagcccgccatg 433 |||||||||||||| | ||||||||||||||| ||||||||||||||||||| |||||| Sbjct: 31969660 atcggctgggtcggcaggagctacctcatcgccatcagcggcgagaagaagccggccatg 31969601 Query: 434 agggagatcatcatcgacgtcgagctcgccgccaggatcatccccaggggcttcatctgg 493 ||||||||||||||||||||||||||||||| || | || |||| ||||| ||||||||| Sbjct: 31969600 agggagatcatcatcgacgtcgagctcgccgtcaagctcctcccgagggggttcatctgg 31969541 Query: 494 cccgtcgccgcataccgcgagctcatcaacggcgacctcgtcgtcgacgacgccgacatc 553 ||||||||||| ||||| |||||||||| |||| ||||||||||||||||||| |||||| Sbjct: 31969540 cccgtcgccgcctaccgtgagctcatcaccggcaacctcgtcgtcgacgacgctgacatc 31969481 Query: 554 ggctact 560 ||||||| Sbjct: 31969480 ggctact 31969474
>gb|AC084748.11| Oryza sativa chromosome 3 BAC OSJNBa0010I09 genomic sequence, complete sequence Length = 144306 Score = 720 bits (363), Expect = 0.0 Identities = 501/547 (91%) Strand = Plus / Minus Query: 14 ttctcggccgcgctggcgctctcctccgtgctcctctcctcggccgccacctccccgccc 73 ||||| || ||||||||||| ||||| ||||| ||||||||||| || || || |||||| Sbjct: 61972 ttctccgcggcgctggcgctgtcctcggtgctgctctcctcggcggcgacgtcgccgccc 61913 Query: 74 cccgcggccgccgacatcgccggcctgaccccgtgcaaggagtccaaggccttcgccaag 133 ||||| ||||||||||||||||| ||||| |||||||||||||||||||| ||||| ||| Sbjct: 61912 cccgccgccgccgacatcgccgggctgacgccgtgcaaggagtccaaggcgttcgcgaag 61853 Query: 134 cgggagaagcagtcggtcaagaagctcaactcgtcgctcaagaagtacgcgcccgactcc 193 |||||||||||||| ||||||||||| | ||||||||||||||||||||||| |||||| Sbjct: 61852 cgggagaagcagtccatcaagaagctccagtcgtcgctcaagaagtacgcgccggactcc 61793 Query: 194 gccccggcgctcgccatccaggccaccatcgacaagaccaagcgccggttcgagaactac 253 || ||||||||||||||| | ||||||||||| ||||| |||||||| |||||||||||| Sbjct: 61792 gcgccggcgctcgccatcaacgccaccatcgagaagacgaagcgccgcttcgagaactac 61733 Query: 254 ggcaagttcggcctgctctgcggctccgacggcctgccccacctcatcgtcagcggcgac 313 |||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||| Sbjct: 61732 ggcaagttcggcctgctctgcggcgccgacggcctcccgcacctcatcgtcagcggcgac 61673 Query: 314 cagcggcactggggcgagttcatcacccccggcgtgctcttcctctacatcgccggctgg 373 ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 61672 cagcggcactggggcgagttcatcaccccgggcttgctcttcctctacatcgccggctgg 61613 Query: 374 atcggctgggtcggacgcagctacctcatcgccgtcagcggcgagaagaagcccgccatg 433 |||||||||||||| | ||||||||||||||| ||||||||||||||||||| |||||| Sbjct: 61612 atcggctgggtcggcaggagctacctcatcgccatcagcggcgagaagaagccggccatg 61553 Query: 434 agggagatcatcatcgacgtcgagctcgccgccaggatcatccccaggggcttcatctgg 493 ||||||||||||||||||||||||||||||| || | || |||| ||||| ||||||||| Sbjct: 61552 agggagatcatcatcgacgtcgagctcgccgtcaagctcctcccgagggggttcatctgg 61493 Query: 494 cccgtcgccgcataccgcgagctcatcaacggcgacctcgtcgtcgacgacgccgacatc 553 ||||||||||| ||||| |||||||||| |||| ||||||||||||||||||| |||||| Sbjct: 61492 cccgtcgccgcctaccgtgagctcatcaccggcaacctcgtcgtcgacgacgctgacatc 61433 Query: 554 ggctact 560 ||||||| Sbjct: 61432 ggctact 61426
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 720 bits (363), Expect = 0.0 Identities = 501/547 (91%) Strand = Plus / Minus Query: 14 ttctcggccgcgctggcgctctcctccgtgctcctctcctcggccgccacctccccgccc 73 ||||| || ||||||||||| ||||| ||||| ||||||||||| || || || |||||| Sbjct: 32060532 ttctccgcggcgctggcgctgtcctcggtgctgctctcctcggcggcgacgtcgccgccc 32060473 Query: 74 cccgcggccgccgacatcgccggcctgaccccgtgcaaggagtccaaggccttcgccaag 133 ||||| ||||||||||||||||| ||||| |||||||||||||||||||| ||||| ||| Sbjct: 32060472 cccgccgccgccgacatcgccgggctgacgccgtgcaaggagtccaaggcgttcgcgaag 32060413 Query: 134 cgggagaagcagtcggtcaagaagctcaactcgtcgctcaagaagtacgcgcccgactcc 193 |||||||||||||| ||||||||||| | ||||||||||||||||||||||| |||||| Sbjct: 32060412 cgggagaagcagtccatcaagaagctccagtcgtcgctcaagaagtacgcgccggactcc 32060353 Query: 194 gccccggcgctcgccatccaggccaccatcgacaagaccaagcgccggttcgagaactac 253 || ||||||||||||||| | ||||||||||| ||||| |||||||| |||||||||||| Sbjct: 32060352 gcgccggcgctcgccatcaacgccaccatcgagaagacgaagcgccgcttcgagaactac 32060293 Query: 254 ggcaagttcggcctgctctgcggctccgacggcctgccccacctcatcgtcagcggcgac 313 |||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||| Sbjct: 32060292 ggcaagttcggcctgctctgcggcgccgacggcctcccgcacctcatcgtcagcggcgac 32060233 Query: 314 cagcggcactggggcgagttcatcacccccggcgtgctcttcctctacatcgccggctgg 373 ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 32060232 cagcggcactggggcgagttcatcaccccgggcttgctcttcctctacatcgccggctgg 32060173 Query: 374 atcggctgggtcggacgcagctacctcatcgccgtcagcggcgagaagaagcccgccatg 433 |||||||||||||| | ||||||||||||||| ||||||||||||||||||| |||||| Sbjct: 32060172 atcggctgggtcggcaggagctacctcatcgccatcagcggcgagaagaagccggccatg 32060113 Query: 434 agggagatcatcatcgacgtcgagctcgccgccaggatcatccccaggggcttcatctgg 493 ||||||||||||||||||||||||||||||| || | || |||| ||||| ||||||||| Sbjct: 32060112 agggagatcatcatcgacgtcgagctcgccgtcaagctcctcccgagggggttcatctgg 32060053 Query: 494 cccgtcgccgcataccgcgagctcatcaacggcgacctcgtcgtcgacgacgccgacatc 553 ||||||||||| ||||| |||||||||| |||| ||||||||||||||||||| |||||| Sbjct: 32060052 cccgtcgccgcctaccgtgagctcatcaccggcaacctcgtcgtcgacgacgctgacatc 32059993 Query: 554 ggctact 560 ||||||| Sbjct: 32059992 ggctact 32059986
>dbj|AK060493.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-D02, full insert sequence Length = 997 Score = 720 bits (363), Expect = 0.0 Identities = 501/547 (91%) Strand = Plus / Plus Query: 14 ttctcggccgcgctggcgctctcctccgtgctcctctcctcggccgccacctccccgccc 73 ||||| || ||||||||||| ||||| ||||| ||||||||||| || || || |||||| Sbjct: 231 ttctccgcggcgctggcgctgtcctcggtgctgctctcctcggcggcgacgtcgccgccc 290 Query: 74 cccgcggccgccgacatcgccggcctgaccccgtgcaaggagtccaaggccttcgccaag 133 ||||| ||||||||||||||||| ||||| |||||||||||||||||||| ||||| ||| Sbjct: 291 cccgccgccgccgacatcgccgggctgacgccgtgcaaggagtccaaggcgttcgcgaag 350 Query: 134 cgggagaagcagtcggtcaagaagctcaactcgtcgctcaagaagtacgcgcccgactcc 193 |||||||||||||| ||||||||||| | ||||||||||||||||||||||| |||||| Sbjct: 351 cgggagaagcagtccatcaagaagctccagtcgtcgctcaagaagtacgcgccggactcc 410 Query: 194 gccccggcgctcgccatccaggccaccatcgacaagaccaagcgccggttcgagaactac 253 || ||||||||||||||| | ||||||||||| ||||| |||||||| |||||||||||| Sbjct: 411 gcgccggcgctcgccatcaacgccaccatcgagaagacgaagcgccgcttcgagaactac 470 Query: 254 ggcaagttcggcctgctctgcggctccgacggcctgccccacctcatcgtcagcggcgac 313 |||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||| Sbjct: 471 ggcaagttcggcctgctctgcggcgccgacggcctcccgcacctcatcgtcagcggcgac 530 Query: 314 cagcggcactggggcgagttcatcacccccggcgtgctcttcctctacatcgccggctgg 373 ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 531 cagcggcactggggcgagttcatcaccccgggcttgctcttcctctacatcgccggctgg 590 Query: 374 atcggctgggtcggacgcagctacctcatcgccgtcagcggcgagaagaagcccgccatg 433 |||||||||||||| | ||||||||||||||| ||||||||||||||||||| |||||| Sbjct: 591 atcggctgggtcggcaggagctacctcatcgccatcagcggcgagaagaagccggccatg 650 Query: 434 agggagatcatcatcgacgtcgagctcgccgccaggatcatccccaggggcttcatctgg 493 ||||||||||||||||||||||||||||||| || | || |||| ||||| ||||||||| Sbjct: 651 agggagatcatcatcgacgtcgagctcgccgtcaagctcctcccgagggggttcatctgg 710 Query: 494 cccgtcgccgcataccgcgagctcatcaacggcgacctcgtcgtcgacgacgccgacatc 553 ||||||||||| ||||| |||||||||| |||| ||||||||||||||||||| |||||| Sbjct: 711 cccgtcgccgcctaccgtgagctcatcaccggcaacctcgtcgtcgacgacgctgacatc 770 Query: 554 ggctact 560 ||||||| Sbjct: 771 ggctact 777
>dbj|AK059890.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-C12, full insert sequence Length = 990 Score = 720 bits (363), Expect = 0.0 Identities = 501/547 (91%) Strand = Plus / Plus Query: 14 ttctcggccgcgctggcgctctcctccgtgctcctctcctcggccgccacctccccgccc 73 ||||| || ||||||||||| ||||| ||||| ||||||||||| || || || |||||| Sbjct: 219 ttctccgcggcgctggcgctgtcctcggtgctgctctcctcggcggcgacgtcgccgccc 278 Query: 74 cccgcggccgccgacatcgccggcctgaccccgtgcaaggagtccaaggccttcgccaag 133 ||||| ||||||||||||||||| ||||| |||||||||||||||||||| ||||| ||| Sbjct: 279 cccgccgccgccgacatcgccgggctgacgccgtgcaaggagtccaaggcgttcgcgaag 338 Query: 134 cgggagaagcagtcggtcaagaagctcaactcgtcgctcaagaagtacgcgcccgactcc 193 |||||||||||||| ||||||||||| | ||||||||||||||||||||||| |||||| Sbjct: 339 cgggagaagcagtccatcaagaagctccagtcgtcgctcaagaagtacgcgccggactcc 398 Query: 194 gccccggcgctcgccatccaggccaccatcgacaagaccaagcgccggttcgagaactac 253 || ||||||||||||||| | ||||||||||| ||||| |||||||| |||||||||||| Sbjct: 399 gcgccggcgctcgccatcaacgccaccatcgagaagacgaagcgccgcttcgagaactac 458 Query: 254 ggcaagttcggcctgctctgcggctccgacggcctgccccacctcatcgtcagcggcgac 313 |||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||| Sbjct: 459 ggcaagttcggcctgctctgcggcgccgacggcctcccgcacctcatcgtcagcggcgac 518 Query: 314 cagcggcactggggcgagttcatcacccccggcgtgctcttcctctacatcgccggctgg 373 ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 519 cagcggcactggggcgagttcatcaccccgggcttgctcttcctctacatcgccggctgg 578 Query: 374 atcggctgggtcggacgcagctacctcatcgccgtcagcggcgagaagaagcccgccatg 433 |||||||||||||| | ||||||||||||||| ||||||||||||||||||| |||||| Sbjct: 579 atcggctgggtcggcaggagctacctcatcgccatcagcggcgagaagaagccggccatg 638 Query: 434 agggagatcatcatcgacgtcgagctcgccgccaggatcatccccaggggcttcatctgg 493 ||||||||||||||||||||||||||||||| || | || |||| ||||| ||||||||| Sbjct: 639 agggagatcatcatcgacgtcgagctcgccgtcaagctcctcccgagggggttcatctgg 698 Query: 494 cccgtcgccgcataccgcgagctcatcaacggcgacctcgtcgtcgacgacgccgacatc 553 ||||||||||| ||||| |||||||||| |||| ||||||||||||||||||| |||||| Sbjct: 699 cccgtcgccgcctaccgtgagctcatcaccggcaacctcgtcgtcgacgacgctgacatc 758 Query: 554 ggctact 560 ||||||| Sbjct: 759 ggctact 765
>gb|AF093634.1|AF093634 Oryza sativa photosystem-1 F subunit precursor (PSI-F) mRNA, complete cds Length = 996 Score = 712 bits (359), Expect = 0.0 Identities = 500/547 (91%) Strand = Plus / Plus Query: 14 ttctcggccgcgctggcgctctcctccgtgctcctctcctcggccgccacctccccgccc 73 ||||| || ||||||||||| ||||| ||||| ||||||||||| || || || ||| || Sbjct: 212 ttctccgcggcgctggcgctgtcctcggtgctgctctcctcggcggcgacgtcgccgtcc 271 Query: 74 cccgcggccgccgacatcgccggcctgaccccgtgcaaggagtccaaggccttcgccaag 133 ||||| ||||||||||||||||| ||||| |||||||||||||||||||| ||||| ||| Sbjct: 272 cccgccgccgccgacatcgccgggctgacgccgtgcaaggagtccaaggcgttcgcgaag 331 Query: 134 cgggagaagcagtcggtcaagaagctcaactcgtcgctcaagaagtacgcgcccgactcc 193 |||||||||||||| ||||||||||| | ||||||||||||||||||||||| |||||| Sbjct: 332 cgggagaagcagtccatcaagaagctccagtcgtcgctcaagaagtacgcgccggactcc 391 Query: 194 gccccggcgctcgccatccaggccaccatcgacaagaccaagcgccggttcgagaactac 253 || ||||||||||||||| | ||||||||||| ||||| |||||||| |||||||||||| Sbjct: 392 gcgccggcgctcgccatcaacgccaccatcgagaagacgaagcgccgcttcgagaactac 451 Query: 254 ggcaagttcggcctgctctgcggctccgacggcctgccccacctcatcgtcagcggcgac 313 |||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||| Sbjct: 452 ggcaagttcggcctgctctgcggcgccgacggcctcccgcacctcatcgtcagcggcgac 511 Query: 314 cagcggcactggggcgagttcatcacccccggcgtgctcttcctctacatcgccggctgg 373 ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 512 cagcggcactggggcgagttcatcaccccgggcttgctcttcctctacatcgccggctgg 571 Query: 374 atcggctgggtcggacgcagctacctcatcgccgtcagcggcgagaagaagcccgccatg 433 |||||||||||||| | ||||||||||||||| ||||||||||||||||||| |||||| Sbjct: 572 atcggctgggtcggcaggagctacctcatcgccatcagcggcgagaagaagccggccatg 631 Query: 434 agggagatcatcatcgacgtcgagctcgccgccaggatcatccccaggggcttcatctgg 493 ||||||||||||||||||||||||||||||| || | || |||| ||||| ||||||||| Sbjct: 632 agggagatcatcatcgacgtcgagctcgccgtcaagctcctcccgagggggttcatctgg 691 Query: 494 cccgtcgccgcataccgcgagctcatcaacggcgacctcgtcgtcgacgacgccgacatc 553 ||||||||||| ||||| |||||||||| |||| ||||||||||||||||||| |||||| Sbjct: 692 cccgtcgccgcctaccgtgagctcatcaccggcaacctcgtcgtcgacgacgctgacatc 751 Query: 554 ggctact 560 ||||||| Sbjct: 752 ggctact 758
>dbj|AK069791.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023031N02, full insert sequence Length = 967 Score = 507 bits (256), Expect = e-140 Identities = 334/360 (92%) Strand = Plus / Plus Query: 201 cgctcgccatccaggccaccatcgacaagaccaagcgccggttcgagaactacggcaagt 260 ||||||||||| | ||||||||||| ||||| |||||||| ||||||||||||||||||| Sbjct: 383 cgctcgccatcaacgccaccatcgagaagacgaagcgccgcttcgagaactacggcaagt 442 Query: 261 tcggcctgctctgcggctccgacggcctgccccacctcatcgtcagcggcgaccagcggc 320 ||||||||||||||||| |||||||||| || |||||||||||||||||||||||||||| Sbjct: 443 tcggcctgctctgcggcgccgacggcctcccgcacctcatcgtcagcggcgaccagcggc 502 Query: 321 actggggcgagttcatcacccccggcgtgctcttcctctacatcgccggctggatcggct 380 |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 503 actggggcgagttcatcaccccgggcttgctcttcctctacatcgccggctggatcggct 562 Query: 381 gggtcggacgcagctacctcatcgccgtcagcggcgagaagaagcccgccatgagggaga 440 ||||||| | ||||||||||||||| ||||||||||||||||||| ||||||||||||| Sbjct: 563 gggtcggcaggagctacctcatcgccatcagcggcgagaagaagccggccatgagggaga 622 Query: 441 tcatcatcgacgtcgagctcgccgccaggatcatccccaggggcttcatctggcccgtcg 500 |||||||||||||||||||||||| || | || |||| ||||| |||||||||||||||| Sbjct: 623 tcatcatcgacgtcgagctcgccgtcaagctcctcccgagggggttcatctggcccgtcg 682 Query: 501 ccgcataccgcgagctcatcaacggcgacctcgtcgtcgacgacgccgacatcggctact 560 |||| ||||| |||||||||| |||| ||||||||||||||||||| ||||||||||||| Sbjct: 683 ccgcctaccgtgagctcatcaccggcaacctcgtcgtcgacgacgctgacatcggctact 742 Score = 172 bits (87), Expect = 1e-39 Identities = 141/159 (88%) Strand = Plus / Plus Query: 14 ttctcggccgcgctggcgctctcctccgtgctcctctcctcggccgccacctccccgccc 73 ||||| || ||||||||||| ||||| ||||| ||||||||||| || || || |||||| Sbjct: 229 ttctccgcggcgctggcgctgtcctcggtgctgctctcctcggcggcgacgtcgccgccc 288 Query: 74 cccgcggccgccgacatcgccggcctgaccccgtgcaaggagtccaaggccttcgccaag 133 ||||| ||||||||||||||||| ||||| |||||||||||||||||||| ||||| ||| Sbjct: 289 cccgccgccgccgacatcgccgggctgacgccgtgcaaggagtccaaggcgttcgcgaag 348 Query: 134 cgggagaagcagtcggtcaagaagctcaactcgtcgctc 172 |||||||||||||| ||||||||||| | ||||||||| Sbjct: 349 cgggagaagcagtccatcaagaagctccagtcgtcgctc 387
>gb|AF139468.2|AF139468 Vigna radiata photosystem I reaction center subunit III (CipPsaF) mRNA, complete cds; nuclear gene for chloroplast product Length = 885 Score = 139 bits (70), Expect = 1e-29 Identities = 307/386 (79%) Strand = Plus / Plus Query: 68 ccgccccccgcggccgccgacatcgccggcctgaccccgtgcaaggagtccaaggccttc 127 |||| |||||| | ||| |||||| |||| |||||||||||||||||||||||| ||| Sbjct: 266 ccgctccccgccgtcgcggacatctccggtctgaccccgtgcaaggagtccaagcagttc 325 Query: 128 gccaagcgggagaagcagtcggtcaagaagctcaactcgtcgctcaagaagtacgcgccc 187 || ||||| |||||||||||| | |||||||| | || ||||| ||| ||||||||| Sbjct: 326 gcaaagcgcgagaagcagtcgataaagaagctggagtcatcgctgaagctgtacgcgccg 385 Query: 188 gactccgccccggcgctcgccatccaggccaccatcgacaagaccaagcgccggttcgag 247 ||| ||| || || || || || |||| | | || ||||| ||||| |||||||| Sbjct: 386 gacagcgctcccgccctggcgataaaggcgtcggtggagaagacgaagcggcggttcgac 445 Query: 248 aactacggcaagttcggcctgctctgcggctccgacggcctgccccacctcatcgtcagc 307 ||||||| ||| || || || |||||| ||||||| || || ||||| ||||| ||| Sbjct: 446 aactacgcgaagcagggtcttctgtgcggcgccgacgggctaccgcacctgatcgtgagc 505 Query: 308 ggcgaccagcggcactggggcgagttcatcacccccggcgtgctcttcctctacatcgcc 367 || |||||| |||||||||||||||||||||| || || | || ||||| ||||||||| Sbjct: 506 ggggaccagaggcactggggcgagttcatcactcctgggttcctattcctgtacatcgcc 565 Query: 368 ggctggatcggctgggtcggacgcagctacctcatcgccgtcagcggcgagaagaagccc 427 || |||||||| ||||| || || |||||||| || ||| |||| | ||||| || || Sbjct: 566 gggtggatcgggtgggtgggtcggagctaccttattgccatcagggatgagaaaaaaccg 625 Query: 428 gccatgagggagatcatcatcgacgt 453 | |||| |||||||||||||||||| Sbjct: 626 acgatgaaggagatcatcatcgacgt 651
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 332 ttcatcacccccggcgtgctcttcctctacatcgccggctggatcggctgggt 384 ||||||| |||| || |||| ||||||||||||||||||||||| |||||||| Sbjct: 346784 ttcatcatccccagcttgctgttcctctacatcgccggctggattggctgggt 346836
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 65.9 bits (33), Expect = 2e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 332 ttcatcacccccggcgtgctcttcctctacatcgccggctggatcggctgggt 384 ||||||| |||| || |||| ||||||||||||||||||||||| |||||||| Sbjct: 1274020 ttcatcatccccagcttgctgttcctctacatcgccggctggattggctgggt 1273968
>emb|BX814457.1|CNS0ADUS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB75ZA08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 411 Score = 63.9 bits (32), Expect = 6e-07 Identities = 113/140 (80%) Strand = Plus / Plus Query: 311 gaccagcggcactggggcgagttcatcacccccggcgtgctcttcctctacatcgccggc 370 ||||||||||| ||||| |||||||| || || || | || ||||||||||| || || Sbjct: 73 gaccagcggcattggggagagttcattactccagggattcttttcctctacattgctgga 132 Query: 371 tggatcggctgggtcggacgcagctacctcatcgccgtcagcggcgagaagaagcccgcc 430 |||||||| ||||| ||| | |||||| |||| || | || || |||||||| ||||| Sbjct: 133 tggatcgggtgggttggaagaagctacttcatagctattagtggtgagaagaaacccgcg 192 Query: 431 atgagggagatcatcatcga 450 |||| |||||||||||||| Sbjct: 193 atgaaagagatcatcatcga 212
>ref|NM_102871.3| Arabidopsis thaliana unknown protein AT1G31330 mRNA, complete cds Length = 925 Score = 56.0 bits (28), Expect = 2e-04 Identities = 112/140 (80%) Strand = Plus / Plus Query: 311 gaccagcggcactggggcgagttcatcacccccggcgtgctcttcctctacatcgccggc 370 ||||||||||| ||||| |||||||| || || || | || ||||||||||| || || Sbjct: 499 gaccagcggcattggggagagttcattactccagggattcttttcctctacattgctgga 558 Query: 371 tggatcggctgggtcggacgcagctacctcatcgccgtcagcggcgagaagaagcccgcc 430 |||||||| ||||| ||| | |||||| | || || | || || |||||||| ||||| Sbjct: 559 tggatcgggtgggttggaagaagctacttaatagctattagtggtgagaagaaacccgcg 618 Query: 431 atgagggagatcatcatcga 450 |||| |||||||||||||| Sbjct: 619 atgaaagagatcatcatcga 638
>gb|BT000680.1| Arabidopsis thaliana clone RAFL05-09-F03 (R10152) putative photosystem I reaction centre subunit III precursor (At1g31330) mRNA, complete cds Length = 859 Score = 56.0 bits (28), Expect = 2e-04 Identities = 112/140 (80%) Strand = Plus / Plus Query: 311 gaccagcggcactggggcgagttcatcacccccggcgtgctcttcctctacatcgccggc 370 ||||||||||| ||||| |||||||| || || || | || ||||||||||| || || Sbjct: 471 gaccagcggcattggggagagttcattactccagggattcttttcctctacattgctgga 530 Query: 371 tggatcggctgggtcggacgcagctacctcatcgccgtcagcggcgagaagaagcccgcc 430 |||||||| ||||| ||| | |||||| | || || | || || |||||||| ||||| Sbjct: 531 tggatcgggtgggttggaagaagctacttaatagctattagtggtgagaagaaacccgcg 590 Query: 431 atgagggagatcatcatcga 450 |||| |||||||||||||| Sbjct: 591 atgaaagagatcatcatcga 610
>gb|AY051021.1| Arabidopsis thaliana putative photosystem I subunit III precursor (At1g31330) mRNA, complete cds Length = 697 Score = 56.0 bits (28), Expect = 2e-04 Identities = 112/140 (80%) Strand = Plus / Plus Query: 311 gaccagcggcactggggcgagttcatcacccccggcgtgctcttcctctacatcgccggc 370 ||||||||||| ||||| |||||||| || || || | || ||||||||||| || || Sbjct: 427 gaccagcggcattggggagagttcattactccagggattcttttcctctacattgctgga 486 Query: 371 tggatcggctgggtcggacgcagctacctcatcgccgtcagcggcgagaagaagcccgcc 430 |||||||| ||||| ||| | |||||| | || || | || || |||||||| ||||| Sbjct: 487 tggatcgggtgggttggaagaagctacttaatagctattagtggtgagaagaaacccgcg 546 Query: 431 atgagggagatcatcatcga 450 |||| |||||||||||||| Sbjct: 547 atgaaagagatcatcatcga 566
>gb|AF360251.1| Arabidopsis thaliana putative photosystem I subunit III precursor (At1g31330) mRNA, complete cds Length = 821 Score = 56.0 bits (28), Expect = 2e-04 Identities = 112/140 (80%) Strand = Plus / Plus Query: 311 gaccagcggcactggggcgagttcatcacccccggcgtgctcttcctctacatcgccggc 370 ||||||||||| ||||| |||||||| || || || | || ||||||||||| || || Sbjct: 471 gaccagcggcattggggagagttcattactccagggattcttttcctctacattgctgga 530 Query: 371 tggatcggctgggtcggacgcagctacctcatcgccgtcagcggcgagaagaagcccgcc 430 |||||||| ||||| ||| | |||||| | || || | || || |||||||| ||||| Sbjct: 531 tggatcgggtgggttggaagaagctacttaatagctattagtggtgagaagaaacccgcg 590 Query: 431 atgagggagatcatcatcga 450 |||| |||||||||||||| Sbjct: 591 atgaaagagatcatcatcga 610
>gb|AY094015.1| Arabidopsis thaliana At1g31330/T19E23_1 mRNA, complete cds Length = 666 Score = 56.0 bits (28), Expect = 2e-04 Identities = 112/140 (80%) Strand = Plus / Plus Query: 311 gaccagcggcactggggcgagttcatcacccccggcgtgctcttcctctacatcgccggc 370 ||||||||||| ||||| |||||||| || || || | || ||||||||||| || || Sbjct: 427 gaccagcggcattggggagagttcattactccagggattcttttcctctacattgctgga 486 Query: 371 tggatcggctgggtcggacgcagctacctcatcgccgtcagcggcgagaagaagcccgcc 430 |||||||| ||||| ||| | |||||| | || || | || || |||||||| ||||| Sbjct: 487 tggatcgggtgggttggaagaagctacttaatagctattagtggtgagaagaaacccgcg 546 Query: 431 atgagggagatcatcatcga 450 |||| |||||||||||||| Sbjct: 547 atgaaagagatcatcatcga 566
>gb|AY062712.1| Arabidopsis thaliana similar to photosystem I reaction centre subunit III precursor (At1g31330; T19E23.12) mRNA, complete cds Length = 805 Score = 56.0 bits (28), Expect = 2e-04 Identities = 112/140 (80%) Strand = Plus / Plus Query: 311 gaccagcggcactggggcgagttcatcacccccggcgtgctcttcctctacatcgccggc 370 ||||||||||| ||||| |||||||| || || || | || ||||||||||| || || Sbjct: 471 gaccagcggcattggggagagttcattactccagggattcttttcctctacattgctgga 530 Query: 371 tggatcggctgggtcggacgcagctacctcatcgccgtcagcggcgagaagaagcccgcc 430 |||||||| ||||| ||| | |||||| | || || | || || |||||||| ||||| Sbjct: 531 tggatcgggtgggttggaagaagctacttaatagctattagtggtgagaagaaacccgcg 590 Query: 431 atgagggagatcatcatcga 450 |||| |||||||||||||| Sbjct: 591 atgaaagagatcatcatcga 610
>gb|AF424564.1|AF424564 Arabidopsis thaliana At1g31330/T19E23_1 mRNA, complete cds Length = 859 Score = 56.0 bits (28), Expect = 2e-04 Identities = 112/140 (80%) Strand = Plus / Plus Query: 311 gaccagcggcactggggcgagttcatcacccccggcgtgctcttcctctacatcgccggc 370 ||||||||||| ||||| |||||||| || || || | || ||||||||||| || || Sbjct: 471 gaccagcggcattggggagagttcattactccagggattcttttcctctacattgctgga 530 Query: 371 tggatcggctgggtcggacgcagctacctcatcgccgtcagcggcgagaagaagcccgcc 430 |||||||| ||||| ||| | |||||| | || || | || || |||||||| ||||| Sbjct: 531 tggatcgggtgggttggaagaagctacttaatagctattagtggtgagaagaaacccgcg 590 Query: 431 atgagggagatcatcatcga 450 |||| |||||||||||||| Sbjct: 591 atgaaagagatcatcatcga 610
>gb|AY052281.1| Arabidopsis thaliana At1g31330/T19E23_1 mRNA, complete cds Length = 1737 Score = 56.0 bits (28), Expect = 2e-04 Identities = 112/140 (80%) Strand = Plus / Plus Query: 311 gaccagcggcactggggcgagttcatcacccccggcgtgctcttcctctacatcgccggc 370 ||||||||||| ||||| |||||||| || || || | || ||||||||||| || || Sbjct: 1352 gaccagcggcattggggagagttcattactccagggattcttttcctctacattgctgga 1411 Query: 371 tggatcggctgggtcggacgcagctacctcatcgccgtcagcggcgagaagaagcccgcc 430 |||||||| ||||| ||| | |||||| | || || | || || |||||||| ||||| Sbjct: 1412 tggatcgggtgggttggaagaagctacttaatagctattagtggtgagaagaaacccgcg 1471 Query: 431 atgagggagatcatcatcga 450 |||| |||||||||||||| Sbjct: 1472 atgaaagagatcatcatcga 1491
>gb|AY048220.1| Arabidopsis thaliana At1g31330/T19E23_1 mRNA, complete cds Length = 820 Score = 56.0 bits (28), Expect = 2e-04 Identities = 112/140 (80%) Strand = Plus / Plus Query: 311 gaccagcggcactggggcgagttcatcacccccggcgtgctcttcctctacatcgccggc 370 ||||||||||| ||||| |||||||| || || || | || ||||||||||| || || Sbjct: 488 gaccagcggcattggggagagttcattactccagggattcttttcctctacattgctgga 547 Query: 371 tggatcggctgggtcggacgcagctacctcatcgccgtcagcggcgagaagaagcccgcc 430 |||||||| ||||| ||| | |||||| | || || | || || |||||||| ||||| Sbjct: 548 tggatcgggtgggttggaagaagctacttaatagctattagtggtgagaagaaacccgcg 607 Query: 431 atgagggagatcatcatcga 450 |||| |||||||||||||| Sbjct: 608 atgaaagagatcatcatcga 627
>emb|BX818241.1|CNS0AEDF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL69ZD07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 776 Score = 56.0 bits (28), Expect = 2e-04 Identities = 112/140 (80%) Strand = Plus / Plus Query: 311 gaccagcggcactggggcgagttcatcacccccggcgtgctcttcctctacatcgccggc 370 ||||||||||| ||||| |||||||| || || || | || ||||||||||| || || Sbjct: 438 gaccagcggcattggggagagttcattactccagggattcttttcctctacattgctgga 497 Query: 371 tggatcggctgggtcggacgcagctacctcatcgccgtcagcggcgagaagaagcccgcc 430 |||||||| ||||| ||| | |||||| | || || | || || |||||||| ||||| Sbjct: 498 tggatcgggtgggttggaagaagctacttaatagctattagtggtgagaagaaacccgcg 557 Query: 431 atgagggagatcatcatcga 450 |||| |||||||||||||| Sbjct: 558 atgaaagagatcatcatcga 577
>emb|BX814304.1|CNS0AEI0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB67ZC10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 811 Score = 56.0 bits (28), Expect = 2e-04 Identities = 112/140 (80%) Strand = Plus / Plus Query: 311 gaccagcggcactggggcgagttcatcacccccggcgtgctcttcctctacatcgccggc 370 ||||||||||| ||||| |||||||| || || || | || ||||||||||| || || Sbjct: 459 gaccagcggcattggggagagttcattactccagggattcttttcctctacattgctgga 518 Query: 371 tggatcggctgggtcggacgcagctacctcatcgccgtcagcggcgagaagaagcccgcc 430 |||||||| ||||| ||| | |||||| | || || | || || |||||||| ||||| Sbjct: 519 tggatcgggtgggttggaagaagctacttaatagctattagtggtgagaagaaacccgcg 578 Query: 431 atgagggagatcatcatcga 450 |||| |||||||||||||| Sbjct: 579 atgaaagagatcatcatcga 598
>emb|BX815295.1|CNS0ACV1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS4ZF05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 817 Score = 56.0 bits (28), Expect = 2e-04 Identities = 112/140 (80%) Strand = Plus / Plus Query: 311 gaccagcggcactggggcgagttcatcacccccggcgtgctcttcctctacatcgccggc 370 ||||||||||| ||||| |||||||| || || || | || ||||||||||| || || Sbjct: 480 gaccagcggcattggggagagttcattactccagggattcttttcctctacattgctgga 539 Query: 371 tggatcggctgggtcggacgcagctacctcatcgccgtcagcggcgagaagaagcccgcc 430 |||||||| ||||| ||| | |||||| | || || | || || |||||||| ||||| Sbjct: 540 tggatcgggtgggttggaagaagctacttaatagctattagtggtgagaagaaacccgcg 599 Query: 431 atgagggagatcatcatcga 450 |||| |||||||||||||| Sbjct: 600 atgaaagagatcatcatcga 619
>emb|BX814897.1|CNS0ACW2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS17ZC11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 824 Score = 56.0 bits (28), Expect = 2e-04 Identities = 112/140 (80%) Strand = Plus / Plus Query: 311 gaccagcggcactggggcgagttcatcacccccggcgtgctcttcctctacatcgccggc 370 ||||||||||| ||||| |||||||| || || || | || ||||||||||| || || Sbjct: 488 gaccagcggcattggggagagttcattactccagggattcttttcctctacattgctgga 547 Query: 371 tggatcggctgggtcggacgcagctacctcatcgccgtcagcggcgagaagaagcccgcc 430 |||||||| ||||| ||| | |||||| | || || | || || |||||||| ||||| Sbjct: 548 tggatcgggtgggttggaagaagctacttaatagctattagtggtgagaagaaacccgcg 607 Query: 431 atgagggagatcatcatcga 450 |||| |||||||||||||| Sbjct: 608 atgaaagagatcatcatcga 627
>gb|AC007654.2|AC007654 Genomic sequence for Arabidopsis thaliana BAC T19E23 from chromosome I, complete sequence Length = 87618 Score = 56.0 bits (28), Expect = 2e-04 Identities = 112/140 (80%) Strand = Plus / Minus Query: 311 gaccagcggcactggggcgagttcatcacccccggcgtgctcttcctctacatcgccggc 370 ||||||||||| ||||| |||||||| || || || | || ||||||||||| || || Sbjct: 55742 gaccagcggcattggggagagttcattactccagggattcttttcctctacattgctgga 55683 Query: 371 tggatcggctgggtcggacgcagctacctcatcgccgtcagcggcgagaagaagcccgcc 430 |||||||| ||||| ||| | |||||| | || || | || || |||||||| ||||| Sbjct: 55682 tggatcgggtgggttggaagaagctacttaatagctattagtggtgagaagaaacccgcg 55623 Query: 431 atgagggagatcatcatcga 450 |||| |||||||||||||| Sbjct: 55622 atgaaagagatcatcatcga 55603
>gb|BT002099.1| Arabidopsis thaliana similar to photosystem I reaction centre subunit III precursor (At1g31330) mRNA, complete cds Length = 699 Score = 56.0 bits (28), Expect = 2e-04 Identities = 112/140 (80%) Strand = Plus / Plus Query: 311 gaccagcggcactggggcgagttcatcacccccggcgtgctcttcctctacatcgccggc 370 ||||||||||| ||||| |||||||| || || || | || ||||||||||| || || Sbjct: 427 gaccagcggcattggggagagttcattactccagggattcttttcctctacattgctgga 486 Query: 371 tggatcggctgggtcggacgcagctacctcatcgccgtcagcggcgagaagaagcccgcc 430 |||||||| ||||| ||| | |||||| | || || | || || |||||||| ||||| Sbjct: 487 tggatcgggtgggttggaagaagctacttaatagctattagtggtgagaagaaacccgcg 546 Query: 431 atgagggagatcatcatcga 450 |||| |||||||||||||| Sbjct: 547 atgaaagagatcatcatcga 566
>emb|X63765.1|SSPPSAFJ9 Synechococcus sp. genes psaF, psaJ and rp19 for photosystem I subunit III, subunit X and ribosomal protein RL9 Length = 1592 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 347 gtgctcttcctctacatcgccggctggatcggctgggt 384 ||||||||||| |||||||| |||||||| |||||||| Sbjct: 475 gtgctcttcctgtacatcgctggctggattggctgggt 512
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Minus Query: 326 ggcgagttcatcacccccggcgtgctcttcctctacatcgccggctggatcggctggg 383 |||||||| ||| ||| ||| |||| ||||||||||||||||||||| | ||||||| Sbjct: 300358 ggcgagtttctcatccctggcctgcttttcctctacatcgccggctggctgggctggg 300301
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 347 gtgctcttcctctacatcgccggctggatcggctgggt 384 ||||||||||| |||||||| |||||||| |||||||| Sbjct: 2524247 gtgctcttcctgtacatcgctggctggattggctgggt 2524284
>emb|AJ245629.1|ATH245629 Arabidopsis thaliana mRNA for photosystem I subunit III precursor (psaF gene) Length = 865 Score = 48.1 bits (24), Expect = 0.038 Identities = 111/140 (79%) Strand = Plus / Plus Query: 311 gaccagcggcactggggcgagttcatcacccccggcgtgctcttcctctacatcgccggc 370 ||||||||||| ||||| |||||||| || || || | || ||||||||||| || || Sbjct: 495 gaccagcggcattggggagagttcattactccagggattcttttcctctacattgctgga 554 Query: 371 tggatcggctgggtcggacgcagctacctcatcgccgtcagcggcgagaagaagcccgcc 430 ||||| || ||||| ||| | |||||| | || || | || || |||||||| ||||| Sbjct: 555 tggattgggtgggttggaagaagctacttaatagctattagtggtgagaagaaacccgcg 614 Query: 431 atgagggagatcatcatcga 450 |||| |||||||||||||| Sbjct: 615 atgaaagagatcatcatcga 634
>gb|DQ122913.1| Chlamydomonas incerta chloroplast photosystem I subunit F (PsaF) mRNA, partial cds; nuclear gene for chloroplast product Length = 1200 Score = 48.1 bits (24), Expect = 0.038 Identities = 51/60 (85%) Strand = Plus / Plus Query: 83 gccgacatcgccggcctgaccccgtgcaaggagtccaaggccttcgccaagcgggagaag 142 ||||||||||| ||||||||||| ||| ||| |||||||| |||||||| ||||||| Sbjct: 148 gccgacatcgcgggcctgaccccctgctccgagagcaaggcctacgccaagctggagaag 207
>gb|AY088009.1| Arabidopsis thaliana clone 40329 mRNA, complete sequence Length = 803 Score = 48.1 bits (24), Expect = 0.038 Identities = 111/140 (79%) Strand = Plus / Plus Query: 311 gaccagcggcactggggcgagttcatcacccccggcgtgctcttcctctacatcgccggc 370 ||||||||||| ||||| |||||||| || || || | || ||||||||||| || || Sbjct: 471 gaccagcggcattggggagagttcattactccagggattcttttcctctacattgctgga 530 Query: 371 tggatcggctgggtcggacgcagctacctcatcgccgtcagcggcgagaagaagcccgcc 430 ||||| || ||||| ||| | |||||| | || || | || || |||||||| ||||| Sbjct: 531 tggattgggtgggttggaagaagctacttaatagctattagtggtgagaagaaacccgcg 590 Query: 431 atgagggagatcatcatcga 450 |||| |||||||||||||| Sbjct: 591 atgaaagagatcatcatcga 610
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Plus Query: 325 gggcgagttcatcacccccggcgtgctcttcctctacatcgccggctggatcggctggg 383 ||||||||| ||| ||||||| |||| || |||||||||||||| ||| | ||||||| Sbjct: 2927198 gggcgagtttctcatccccggcttgctttttctctacatcgccggttggctgggctggg 2927256
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 350 ctcttcctctacatcgccggctggatcggctgggt 384 |||||||||||||| ||||| |||||||| ||||| Sbjct: 111398 ctcttcctctacattgccggttggatcggttgggt 111364
>emb|AL611927.21| Mouse DNA sequence from clone RP23-445E20 on chromosome 4, complete sequence Length = 111802 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 55 ggccgccacctccccgccccccgcggccgcc 85 ||||||| |||||||||||||||||||||| Sbjct: 88236 ggccgccggctccccgccccccgcggccgcc 88266
>ref|NM_197599.1| Oryza sativa (japonica cultivar-group) mucin-like protein (OSJNBb0015I11.17), mRNA Length = 1110 Score = 44.1 bits (22), Expect = 0.59 Identities = 31/34 (91%) Strand = Plus / Plus Query: 522 acggcgacctcgtcgtcgacgacgccgacatcgg 555 |||||| ||| ||||||| ||||||||||||||| Sbjct: 353 acggcggccttgtcgtcgccgacgccgacatcgg 386
>gb|AC103360.9| Mus musculus chromosome 8, clone RP24-414A22, complete sequence Length = 172618 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 63 cctccccgccccccgcggccgc 84 |||||||||||||||||||||| Sbjct: 162773 cctccccgccccccgcggccgc 162752
>gb|AC146607.2| Mus musculus BAC clone RP23-209N19 from chromosome 3, complete sequence Length = 173758 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 63 cctccccgccccccgcggccgc 84 |||||||||||||||||||||| Sbjct: 148672 cctccccgccccccgcggccgc 148693
>gb|AC125154.3| Mus musculus BAC clone RP24-380C2 from chromosome 3, complete sequence Length = 186277 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 63 cctccccgccccccgcggccgc 84 |||||||||||||||||||||| Sbjct: 183091 cctccccgccccccgcggccgc 183070
>emb|AL590464.1|SCO590464 Streptomyces coelicolor plasmid SCP1; segment 2/2 Length = 178073 Score = 44.1 bits (22), Expect = 0.59 Identities = 31/34 (91%) Strand = Plus / Minus Query: 523 cggcgacctcgtcgtcgacgacgccgacatcggc 556 |||||| ||||||||||||| ||| ||||||||| Sbjct: 38065 cggcgagctcgtcgtcgacggcgcggacatcggc 38032
>emb|AL590463.1|SCO590463 Streptomyces coelicolor plasmid SCP1; segment 1/2 Length = 178000 Score = 44.1 bits (22), Expect = 0.59 Identities = 31/34 (91%) Strand = Plus / Plus Query: 523 cggcgacctcgtcgtcgacgacgccgacatcggc 556 |||||| ||||||||||||| ||| ||||||||| Sbjct: 127557 cggcgagctcgtcgtcgacggcgcggacatcggc 127590
>gb|AC008406.7| Homo sapiens chromosome 5 clone CTC-276P9, complete sequence Length = 178030 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Plus Query: 57 ccgccacctccccgccccccgcggcc 82 ||||| |||||||||||||||||||| Sbjct: 24193 ccgccgcctccccgccccccgcggcc 24218
>gb|AC158313.7| Mus musculus chromosome 8, clone RP23-246H16, complete sequence Length = 168864 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 63 cctccccgccccccgcggccgc 84 |||||||||||||||||||||| Sbjct: 12841 cctccccgccccccgcggccgc 12820
>gb|BT023413.1| Arabidopsis thaliana At2g47890 gene, complete cds Length = 1470 Score = 44.1 bits (22), Expect = 0.59 Identities = 61/74 (82%) Strand = Plus / Minus Query: 311 gaccagcggcactggggcgagttcatcacccccggcgtgctcttcctctacatcgccggc 370 ||||||||||| ||||| |||||||| || || || | || ||||||||||| || || Sbjct: 1335 gaccagcggcattggggagagttcattactccagggattcttttcctctacattgctgga 1276 Query: 371 tggatcggctgggt 384 |||||||| ||||| Sbjct: 1275 tggatcgggtgggt 1262
>gb|AC020612.40| Homo sapiens 12 BAC RP11-133N21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 188928 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 54 cggccgccacctccccgccccc 75 |||||||||||||||||||||| Sbjct: 13070 cggccgccacctccccgccccc 13091
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 529 cctcgtcgtcgacgacgccgac 550 |||||||||||||||||||||| Sbjct: 1139213 cctcgtcgtcgacgacgccgac 1139192 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 75 ccgcggccgccgacatcgccg 95 ||||||||||||||||||||| Sbjct: 4899183 ccgcggccgccgacatcgccg 4899203
>dbj|AK106264.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-100-F10, full insert sequence Length = 1488 Score = 44.1 bits (22), Expect = 0.59 Identities = 31/34 (91%) Strand = Plus / Plus Query: 522 acggcgacctcgtcgtcgacgacgccgacatcgg 555 |||||| ||| ||||||| ||||||||||||||| Sbjct: 29 acggcggccttgtcgtcgccgacgccgacatcgg 62
>gb|M83119.1|FTRPHOTOI Flaveria trinervia photosystem I subunit III (psaF) gene, complete cds Length = 824 Score = 44.1 bits (22), Expect = 0.59 Identities = 55/66 (83%) Strand = Plus / Plus Query: 323 tggggcgagttcatcacccccggcgtgctcttcctctacatcgccggctggatcggctgg 382 |||||||| || ||||||||||| | || || || |||||||| || |||||||| ||| Sbjct: 477 tggggcgaatttatcacccccgggattctatttctgtacatcgctggatggatcgggtgg 536 Query: 383 gtcgga 388 |||||| Sbjct: 537 gtcgga 542
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 260 ttcggcctgctctgcggctccgacggcct 288 |||||||||||| ||||| |||||||||| Sbjct: 1425663 ttcggcctgctcggcggcaccgacggcct 1425635
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 19 ggccgcgctggcgctctcctc 39 ||||||||||||||||||||| Sbjct: 1294489 ggccgcgctggcgctctcctc 1294469
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 336 tcacccccggcgtgctcttcc 356 ||||||||||||||||||||| Sbjct: 3154508 tcacccccggcgtgctcttcc 3154528
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 528 acctcgtcgtcgacgacgccg 548 ||||||||||||||||||||| Sbjct: 1949429 acctcgtcgtcgacgacgccg 1949449
>gb|AC147676.10| Canis Familiaris, clone XX-25H12, complete sequence Length = 203436 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 54 cggccgccacctccccgccccccgcggcc 82 |||||||| ||||||||||||||| |||| Sbjct: 18509 cggccgccccctccccgccccccggggcc 18537
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 75 ccgcggccgccgacatcgccg 95 ||||||||||||||||||||| Sbjct: 1764494 ccgcggccgccgacatcgccg 1764514
>gb|BT013202.1| Lycopersicon esculentum clone 134366R, mRNA sequence Length = 824 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 311 gaccagcggcactggggcgagttcatcac 339 |||||| |||||||||| ||||||||||| Sbjct: 473 gaccagaggcactggggtgagttcatcac 501
>emb|BX248343.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 10/14 Length = 307550 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 336 tcacccccggcgtgctcttcc 356 ||||||||||||||||||||| Sbjct: 299314 tcacccccggcgtgctcttcc 299334
>emb|BX842581.1| Mycobacterium tuberculosis H37Rv complete genome; segment 10/13 Length = 348676 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 336 tcacccccggcgtgctcttcc 356 ||||||||||||||||||||| Sbjct: 41261 tcacccccggcgtgctcttcc 41281
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 75 ccgcggccgccgacatcgccg 95 ||||||||||||||||||||| Sbjct: 3099606 ccgcggccgccgacatcgccg 3099626
>gb|AC087485.6| Homo sapiens chromosome 15, clone RP11-570N16, complete sequence Length = 169771 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 56 gccgccacctccccgcccccc 76 ||||||||||||||||||||| Sbjct: 92885 gccgccacctccccgcccccc 92905
>gb|AC051633.7| Oryza sativa chromosome 10 BAC OSJNBb0015I11 genomic sequence, complete sequence Length = 138824 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 522 acggcgacctcgtcgtcgacgacgccgacatcg 554 |||||| ||| ||||||| |||||||||||||| Sbjct: 107045 acggcggccttgtcgtcgccgacgccgacatcg 107077
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 75 ccgcggccgccgacatcgccg 95 ||||||||||||||||||||| Sbjct: 2247505 ccgcggccgccgacatcgccg 2247525
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 532 cgtcgtcgacgacgccgacatcggc 556 |||||||||||||| |||||||||| Sbjct: 18403072 cgtcgtcgacgacgacgacatcggc 18403096 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 529 cctcgtcgtcgacgacgccg 548 |||||||||||||||||||| Sbjct: 12249167 cctcgtcgtcgacgacgccg 12249186
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 522 acggcgacctcgtcgtcgacgacgccgacatcg 554 |||||| ||| ||||||| |||||||||||||| Sbjct: 20705593 acggcggccttgtcgtcgccgacgccgacatcg 20705625 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 530 ctcgtcgtcgacgacgccga 549 |||||||||||||||||||| Sbjct: 21068367 ctcgtcgtcgacgacgccga 21068348
>gb|AC136896.6| Homo sapiens chromosome 15, clone RP11-860O1, complete sequence Length = 214946 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 56 gccgccacctccccgcccccc 76 ||||||||||||||||||||| Sbjct: 112315 gccgccacctccccgcccccc 112335
>gb|AC135350.6| Homo sapiens chromosome 15, clone RP13-946E15, complete sequence Length = 158316 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 56 gccgccacctccccgcccccc 76 ||||||||||||||||||||| Sbjct: 18614 gccgccacctccccgcccccc 18594
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 517 catcaacggcgacctcgtcgtcgac 541 |||| |||||||||||||||||||| Sbjct: 1766734 catcgacggcgacctcgtcgtcgac 1766710
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 522 acggcgacctcgtcgtcgacgacgccgacatcg 554 |||||| ||| ||||||| |||||||||||||| Sbjct: 20716865 acggcggccttgtcgtcgccgacgccgacatcg 20716897 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 530 ctcgtcgtcgacgacgccga 549 |||||||||||||||||||| Sbjct: 21079631 ctcgtcgtcgacgacgccga 21079612
>emb|AL607003.3|OSJN00130 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0006N15, complete sequence Length = 133413 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 532 cgtcgtcgacgacgccgacatcggc 556 |||||||||||||| |||||||||| Sbjct: 104995 cgtcgtcgacgacgacgacatcggc 105019
>gb|AC145958.3| Gallus gallus BAC clone CH261-16J12 from chromosome unknown, complete sequence Length = 207441 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 63 cctccccgccccccgcggccgccga 87 |||||||||||||| |||||||||| Sbjct: 182073 cctccccgcccccctcggccgccga 182097
>gb|BC043542.1| Homo sapiens patched homolog (Drosophila), mRNA (cDNA clone IMAGE:5170834), complete cds Length = 1403 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 ctccccgccccccgcggccg 83 |||||||||||||||||||| Sbjct: 20 ctccccgccccccgcggccg 1
>ref|XM_471550.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 837 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 529 cctcgtcgtcgacgacgccg 548 |||||||||||||||||||| Sbjct: 195 cctcgtcgtcgacgacgccg 214
>ref|NM_197655.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0015J15.29), mRNA Length = 1440 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 530 ctcgtcgtcgacgacgccga 549 |||||||||||||||||||| Sbjct: 66 ctcgtcgtcgacgacgccga 85
>ref|NM_185531.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1514 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 49 ctcctcggccgccacctccccgcc 72 ||||||| |||||||||||||||| Sbjct: 476 ctcctcgcccgccacctccccgcc 499
>ref|XM_478588.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2356 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 ccgccgacatcgccggcctg 100 |||||||||||||||||||| Sbjct: 1979 ccgccgacatcgccggcctg 1960
>gb|AF175325.1| Homo sapiens eukaryotic initiation factor 4AI (EIF4A1) gene, partial cds Length = 6732 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 gcgcccgactccgccccggc 201 |||||||||||||||||||| Sbjct: 5215 gcgcccgactccgccccggc 5196
>ref|XM_359774.1| Magnaporthe grisea 70-15 hypothetical protein (MG05003.4) partial mRNA Length = 1698 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 218 accatcgacaagaccaagcgccggttcg 245 |||||||||||| || |||||||||||| Sbjct: 628 accatcgacaaggccgagcgccggttcg 655
>gb|AC108755.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0028C22, complete sequence Length = 154228 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 49 ctcctcggccgccacctccccgcc 72 |||||||||||||||||| ||||| Sbjct: 153786 ctcctcggccgccacctcgccgcc 153763
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 405 ccgtcagcggcgagaagaag 424 |||||||||||||||||||| Sbjct: 3593454 ccgtcagcggcgagaagaag 3593435
>gb|AE009291.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 61 of 187 of the complete sequence Length = 12142 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 acaagaccaagcgccggttc 244 |||||||||||||||||||| Sbjct: 1178 acaagaccaagcgccggttc 1197
>gb|AE008321.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 125 of 187 of the complete sequence Length = 14335 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 acaagaccaagcgccggttc 244 |||||||||||||||||||| Sbjct: 14061 acaagaccaagcgccggttc 14042
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 399 tcatcgccgtcagcggcgag 418 |||||||||||||||||||| Sbjct: 1323871 tcatcgccgtcagcggcgag 1323852
>gb|BC006881.1| Mus musculus solute carrier family 35, member B3, mRNA (cDNA clone MGC:11822 IMAGE:3596363), complete cds Length = 1800 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 cctcggccgccacctccccg 70 |||||||||||||||||||| Sbjct: 51 cctcggccgccacctccccg 32
>ref|XM_843923.1| PREDICTED: Canis familiaris similar to hairy and enhancer of split 6 (LOC607298), mRNA Length = 705 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 ccccgccccccgcggccgcc 85 |||||||||||||||||||| Sbjct: 23 ccccgccccccgcggccgcc 4
>gb|AY261359.1| Bovine herpesvirus 5 strain SV507/99, complete genome Length = 138390 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 cctcggccgccacctccccg 70 |||||||||||||||||||| Sbjct: 6185 cctcggccgccacctccccg 6204
>ref|XM_542055.2| PREDICTED: Canis familiaris similar to zinc finger protein 653, transcript variant 1 (LOC484939), mRNA Length = 1914 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 49 ctcctcggccgccacctccccgcc 72 ||||||||||||| |||||||||| Sbjct: 209 ctcctcggccgccgcctccccgcc 186
>ref|XM_848511.1| PREDICTED: Canis familiaris similar to zinc finger protein 653, transcript variant 2 (LOC484939), mRNA Length = 2233 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 49 ctcctcggccgccacctccccgcc 72 ||||||||||||| |||||||||| Sbjct: 209 ctcctcggccgccgcctccccgcc 186
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 364 cgccggctggatcggctgggtcgg 387 ||||||||||||||||||| |||| Sbjct: 5065988 cgccggctggatcggctggttcgg 5065965
>gb|BC032613.1| Homo sapiens cDNA clone IMAGE:5555330, **** WARNING: chimeric clone **** Length = 3530 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 gcgcccgactccgccccggc 201 |||||||||||||||||||| Sbjct: 2032 gcgcccgactccgccccggc 2013
>ref|XM_814502.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053510303.30) partial mRNA Length = 1848 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 gctggcgctctcctccgtgc 44 |||||||||||||||||||| Sbjct: 135 gctggcgctctcctccgtgc 116
>gb|AC125223.3| Mus musculus BAC clone RP23-31C10 from 13, complete sequence Length = 221903 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 cctcggccgccacctccccg 70 |||||||||||||||||||| Sbjct: 56462 cctcggccgccacctccccg 56443
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 532 cgtcgtcgacgacgccgaca 551 |||||||||||||||||||| Sbjct: 1625227 cgtcgtcgacgacgccgaca 1625246
>emb|AL161729.27| Human DNA sequence from clone RP11-435O5 on chromosome 9q22.1-22.33 Contains the PTCH gene for patched homolog, a novel gene, the gene for a novel protein similar to a metallothionein protein (MT1) and three CpG islands, complete sequence Length = 189643 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 ctccccgccccccgcggccg 83 |||||||||||||||||||| Sbjct: 43814 ctccccgccccccgcggccg 43795
>emb|X13495.1|CRPSAF C.reinhardtii mRNA for 17 kd P21 protein of photosystem I Length = 1227 Score = 40.1 bits (20), Expect = 9.2 Identities = 32/36 (88%) Strand = Plus / Plus Query: 262 cggcctgctctgcggctccgacggcctgccccacct 297 ||||||||| |||||| |||||| ||||||||||| Sbjct: 381 cggcctgctgtgcggcaacgacggtctgccccacct 416 Score = 40.1 bits (20), Expect = 9.2 Identities = 50/60 (83%) Strand = Plus / Plus Query: 83 gccgacatcgccggcctgaccccgtgcaaggagtccaaggccttcgccaagcgggagaag 142 ||||||||||| ||||||||||| ||| ||| |||||| | |||||||| ||||||| Sbjct: 202 gccgacatcgcgggcctgaccccctgctccgagagcaaggcttacgccaagctggagaag 261
>gb|DQ123986.1| Coffea arabica x Coffea canephora clone HT-SSH4-E10 mRNA sequence Length = 714 Score = 40.1 bits (20), Expect = 9.2 Identities = 51/62 (82%) Strand = Plus / Plus Query: 83 gccgacatcgccggcctgaccccgtgcaaggagtccaaggccttcgccaagcgggagaag 142 ||||||||||| ||||| || || ||||||||| |||| || |||||||| |||||| Sbjct: 283 gccgacatcgctggcctcacaccatgcaaggagnncaagcaatttgccaagcgcgagaag 342 Query: 143 ca 144 || Sbjct: 343 ca 344
>emb|BX640439.1| Bordetella bronchiseptica strain RB50, complete genome; segment 3/16 Length = 346362 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 399 tcatcgccgtcagcggcgagaaga 422 ||||| |||||||||||||||||| Sbjct: 190147 tcatcaccgtcagcggcgagaaga 190124
>emb|BX640425.1| Bordetella parapertussis strain 12822, complete genome; segment 3/14 Length = 348257 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 399 tcatcgccgtcagcggcgagaaga 422 ||||| |||||||||||||||||| Sbjct: 103983 tcatcaccgtcagcggcgagaaga 103960
>emb|BX640414.1| Bordetella pertussis strain Tohama I, complete genome; segment 4/12 Length = 343243 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 ctacggcaagttcggcctgc 269 |||||||||||||||||||| Sbjct: 250239 ctacggcaagttcggcctgc 250220
>emb|BX640411.1| Bordetella pertussis strain Tohama I, complete genome; segment 1/12 Length = 346359 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 399 tcatcgccgtcagcggcgagaaga 422 ||||| |||||||||||||||||| Sbjct: 179712 tcatcaccgtcagcggcgagaaga 179689
>emb|BX572593.1| Rhodopseudomonas palustris CGA009 complete genome; segment 1/16 Length = 349315 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 tcaagaagtacgcgcccgac 190 |||||||||||||||||||| Sbjct: 215456 tcaagaagtacgcgcccgac 215437
>emb|BX569694.1| Synechococcus sp. WH8102 complete genome; segment 6/7 Length = 349122 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 281 gacggcctgccccacctcatcgtc 304 ||||||||||||||||| |||||| Sbjct: 13068 gacggcctgccccacctgatcgtc 13091
>emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete genome; segment 14/29 Length = 309050 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 529 cctcgtcgtcgacgacgccg 548 |||||||||||||||||||| Sbjct: 228112 cctcgtcgtcgacgacgccg 228093
>emb|AL662955.3|OSJN00158 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019J05, complete sequence Length = 185211 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 529 cctcgtcgtcgacgacgccg 548 |||||||||||||||||||| Sbjct: 74048 cctcgtcgtcgacgacgccg 74067
>emb|CR388137.8| Zebrafish DNA sequence from clone DKEY-17M13 in linkage group 5, complete sequence Length = 181599 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 ccggcgctcgccatccaggc 216 |||||||||||||||||||| Sbjct: 67707 ccggcgctcgccatccaggc 67726
>gb|AC130610.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0478F09, complete sequence Length = 145070 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 523 cggcgacctcgtcgtcgacgacgccgac 550 ||||||| ||||||||||||||| |||| Sbjct: 102034 cggcgacgtcgtcgtcgacgacgacgac 102007
>gb|AC100748.2| Homo sapiens chromosome 17, clone CTD-2231E3, complete sequence Length = 133544 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 cccgccccccgcggccgccg 86 |||||||||||||||||||| Sbjct: 78415 cccgccccccgcggccgccg 78396
>gb|AE012083.1| Xanthomonas axonopodis pv. citri str. 306, section 461 of 469 of the complete genome Length = 10370 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 364 cgccggctggatcggctgggtcgg 387 ||||||||||||||||||| |||| Sbjct: 1228 cgccggctggatcggctggttcgg 1205
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 acaagaccaagcgccggttc 244 |||||||||||||||||||| Sbjct: 4040519 acaagaccaagcgccggttc 4040538
>gb|AC068327.14| Homo sapiens chromosome 15, clone RP11-394G8, complete sequence Length = 177539 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 gcgaccagcggcactggggc 328 |||||||||||||||||||| Sbjct: 154042 gcgaccagcggcactggggc 154061
>gb|AC026758.8| Oryza sativa chromosome 10 BAC OSJNBa0015J15 genomic sequence, complete sequence Length = 144798 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 530 ctcgtcgtcgacgacgccga 549 |||||||||||||||||||| Sbjct: 137339 ctcgtcgtcgacgacgccga 137358
>gb|AC026583.10| Homo sapiens chromosome 15, clone RP11-20C17, complete sequence Length = 175472 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 gcgaccagcggcactggggc 328 |||||||||||||||||||| Sbjct: 32926 gcgaccagcggcactggggc 32945
>gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome Length = 2628784 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 448 cgacgtcgagctcgccgcca 467 |||||||||||||||||||| Sbjct: 1823612 cgacgtcgagctcgccgcca 1823593
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 531 tcgtcgtcgacgacgccgac 550 |||||||||||||||||||| Sbjct: 3776422 tcgtcgtcgacgacgccgac 3776403
>dbj|AK167051.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0028O13 product:solute carrier family 35, member B3, full insert sequence Length = 1322 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 cctcggccgccacctccccg 70 |||||||||||||||||||| Sbjct: 55 cctcggccgccacctccccg 36
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 363 tcgccggctggatcggctgg 382 |||||||||||||||||||| Sbjct: 655777 tcgccggctggatcggctgg 655758
>dbj|AK077208.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4933431G15 product:CGI-19 PROTEIN homolog [Homo sapiens], full insert sequence Length = 1326 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 cctcggccgccacctccccg 70 |||||||||||||||||||| Sbjct: 35 cctcggccgccacctccccg 16
>dbj|AK079504.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A130081B15 product:unclassifiable, full insert sequence Length = 1077 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 cctcggccgccacctccccg 70 |||||||||||||||||||| Sbjct: 36 cctcggccgccacctccccg 17
>dbj|AK076592.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4921526O06 product:CGI-19 PROTEIN homolog [Homo sapiens], full insert sequence Length = 1924 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 cctcggccgccacctccccg 70 |||||||||||||||||||| Sbjct: 54 cctcggccgccacctccccg 35
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 49 ctcctcggccgccacctccccgcc 72 |||||||||||||||||| ||||| Sbjct: 19826519 ctcctcggccgccacctcgccgcc 19826496
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 49 ctcctcggccgccacctccccgcc 72 ||||||| |||||||||||||||| Sbjct: 29269991 ctcctcgcccgccacctccccgcc 29270014 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 ccgccgacatcgccggcctg 100 |||||||||||||||||||| Sbjct: 21312599 ccgccgacatcgccggcctg 21312580
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 523 cggcgacctcgtcgtcgacgacgccgac 550 ||||||| ||||||||||||||| |||| Sbjct: 4734029 cggcgacgtcgtcgtcgacgacgacgac 4734002
>gb|AC024255.22|AC024255 Homo sapiens 12 BAC RP11-31A23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 165236 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 gccacctccccgccccccgc 78 |||||||||||||||||||| Sbjct: 67832 gccacctccccgccccccgc 67851
>dbj|AB198072.1| Bos taurus TPM3 mRNA for tropomyosin 3, complete cds Length = 1106 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 gccacctccccgccccccgc 78 |||||||||||||||||||| Sbjct: 1046 gccacctccccgccccccgc 1027
>ref|NM_134060.2| Mus musculus solute carrier family 35, member B3 (Slc35b3), mRNA Length = 1924 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 cctcggccgccacctccccg 70 |||||||||||||||||||| Sbjct: 54 cctcggccgccacctccccg 35
>dbj|AP004316.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0597G07 Length = 152928 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 49 ctcctcggccgccacctccccgcc 72 ||||||| |||||||||||||||| Sbjct: 58680 ctcctcgcccgccacctccccgcc 58703
>dbj|AP003816.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1165_F02 Length = 125993 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 49 ctcctcggccgccacctccccgcc 72 ||||||| |||||||||||||||| Sbjct: 110065 ctcctcgcccgccacctccccgcc 110088
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 gccgccgacatcgccggcct 99 |||||||||||||||||||| Sbjct: 7116623 gccgccgacatcgccggcct 7116604
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 cgccggctggatcggctggg 383 |||||||||||||||||||| Sbjct: 3034827 cgccggctggatcggctggg 3034808
>dbj|AP005735.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0034B12 Length = 124083 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 49 ctcctcggccgccacctccccgcc 72 |||||||||||||||||| ||||| Sbjct: 50959 ctcctcggccgccacctcgccgcc 50936
>dbj|AP006756.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0450E05 Length = 176553 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 49 ctcctcggccgccacctccccgcc 72 |||||||||||||||||| ||||| Sbjct: 172205 ctcctcggccgccacctcgccgcc 172182
>dbj|AP003736.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1008_E09 Length = 101964 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 ccgccgacatcgccggcctg 100 |||||||||||||||||||| Sbjct: 32767 ccgccgacatcgccggcctg 32748
>dbj|AP005786.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0458H05 Length = 136299 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 ccgccgacatcgccggcctg 100 |||||||||||||||||||| Sbjct: 98884 ccgccgacatcgccggcctg 98865
>emb|AJ338797.1|HSA338797 Homo sapiens genomic sequence surrounding NotI site, clone NR1-TJ14R Length = 728 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 gcgcccgactccgccccggc 201 |||||||||||||||||||| Sbjct: 401 gcgcccgactccgccccggc 420
>emb|AJ339124.1|HSA339124 Homo sapiens genomic sequence surrounding NotI site, clone NR1-BN20C Length = 680 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 gcgcccgactccgccccggc 201 |||||||||||||||||||| Sbjct: 401 gcgcccgactccgccccggc 420
>emb|AJ340425.1|HSA340425 Homo sapiens genomic sequence surrounding NotI site, clone NL1-UO9R Length = 846 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 gcgcccgactccgccccggc 201 |||||||||||||||||||| Sbjct: 401 gcgcccgactccgccccggc 420
>emb|AJ340397.1|HSA340397 Homo sapiens genomic sequence surrounding NotI site, clone NR1-SH13C Length = 621 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 gcgcccgactccgccccggc 201 |||||||||||||||||||| Sbjct: 401 gcgcccgactccgccccggc 420
>emb|AJ338925.1|HSA338925 Homo sapiens genomic sequence surrounding NotI site, clone NL1-VJ19C Length = 577 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 gcgcccgactccgccccggc 201 |||||||||||||||||||| Sbjct: 401 gcgcccgactccgccccggc 420
>emb|AJ338981.1|HSA338981 Homo sapiens genomic sequence surrounding NotI site, clone NR1-XM14C Length = 649 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 gcgcccgactccgccccggc 201 |||||||||||||||||||| Sbjct: 401 gcgcccgactccgccccggc 420
>dbj|AK100722.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023116H24, full insert sequence Length = 2354 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 ccgccgacatcgccggcctg 100 |||||||||||||||||||| Sbjct: 1977 ccgccgacatcgccggcctg 1958
>dbj|AK070656.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023055E24, full insert sequence Length = 1513 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 49 ctcctcggccgccacctccccgcc 72 ||||||| |||||||||||||||| Sbjct: 475 ctcctcgcccgccacctccccgcc 498
>gb|AF135791.1|AF135791 Chlamydomonas reinhardtii photosystem I subunit F precursor (psaF) gene, complete cds Length = 2332 Score = 40.1 bits (20), Expect = 9.2 Identities = 32/36 (88%) Strand = Plus / Plus Query: 262 cggcctgctctgcggctccgacggcctgccccacct 297 ||||||||| |||||| |||||| ||||||||||| Sbjct: 1018 cggcctgctgtgcggcaacgacggtctgccccacct 1053 Score = 40.1 bits (20), Expect = 9.2 Identities = 50/60 (83%) Strand = Plus / Plus Query: 83 gccgacatcgccggcctgaccccgtgcaaggagtccaaggccttcgccaagcgggagaag 142 ||||||||||| ||||||||||| ||| ||| |||||| | |||||||| ||||||| Sbjct: 748 gccgacatcgcgggcctgaccccctgctccgagagcaaggcttacgccaagctggagaag 807
>ref|NM_001011674.1| Bos taurus tropomyosin 3 (TPM3), mRNA Length = 1106 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 gccacctccccgccccccgc 78 |||||||||||||||||||| Sbjct: 1046 gccacctccccgccccccgc 1027
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 513 agctcatcaacggcgacctcgtcg 536 |||||||||||| ||||||||||| Sbjct: 1147974 agctcatcaacgacgacctcgtcg 1147951 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 agtacgcgcccgactccgcc 196 |||||||||||||||||||| Sbjct: 424692 agtacgcgcccgactccgcc 424673
>gb|U00090.1| Rhizobium sp. NGR234 plasmid pNGR234a, complete sequence Length = 536165 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 77 gcggccgccgacatcgccggcctg 100 ||||||| |||||||||||||||| Sbjct: 369847 gcggccgacgacatcgccggcctg 369870
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 gccacctccccgccccccgc 78 |||||||||||||||||||| Sbjct: 2961080 gccacctccccgccccccgc 2961099
>dbj|AB209672.1| Homo sapiens mRNA for Transducin-like enhancer of split 3 splice variant 1 variant protein Length = 7809 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 gcgaccagcggcactggggc 328 |||||||||||||||||||| Sbjct: 1760 gcgaccagcggcactggggc 1741
>gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0453H11, complete sequence Length = 187956 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 523 cggcgacctcgtcgtcgacgacgccgac 550 ||||||| ||||||||||||||| |||| Sbjct: 6437 cggcgacgtcgtcgtcgacgacgacgac 6410
>emb|AJ342453.1|HSA342453 Homo sapiens genomic sequence surrounding NotI site, clone NR1-QJ1C Length = 598 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 gcgcccgactccgccccggc 201 |||||||||||||||||||| Sbjct: 401 gcgcccgactccgccccggc 420
>emb|AJ342377.1|HSA342377 Homo sapiens genomic sequence surrounding NotI site, clone NR1-QD10R Length = 672 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 gcgcccgactccgccccggc 201 |||||||||||||||||||| Sbjct: 401 gcgcccgactccgccccggc 420
>gb|M77812.1|RABMHCP Rabbit myosin heavy chain mRNA, complete cds Length = 6644 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 118 caaggccttcgccaagcgggagaagcag 145 ||||||||||||||||||| || ||||| Sbjct: 2505 caaggccttcgccaagcggcagcagcag 2532
>gb|AC016876.10| Homo sapiens chromosome 17, clone RP11-186B7, complete sequence Length = 60268 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 gcgcccgactccgccccggc 201 |||||||||||||||||||| Sbjct: 21580 gcgcccgactccgccccggc 21599
>dbj|AB023819.1| Oryza sativa (indica cultivar-group) osnas3 mRNA for nicotianamine synthase 3, complete cds Length = 1482 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 49 ctcctcggccgccacctccccgcc 72 ||||||| |||||||||||||||| Sbjct: 455 ctcctcgcccgccacctccccgcc 478 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,087,654 Number of Sequences: 3902068 Number of extensions: 4087654 Number of successful extensions: 100782 Number of sequences better than 10.0: 154 Number of HSP's better than 10.0 without gapping: 137 Number of HSP's successfully gapped in prelim test: 19 Number of HSP's that attempted gapping in prelim test: 95745 Number of HSP's gapped (non-prelim): 5021 length of query: 673 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 650 effective length of database: 17,143,297,704 effective search space: 11143143507600 effective search space used: 11143143507600 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
