>GLND_STRCO (O69873) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
           uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 835

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 18/39 (46%), Positives = 21/39 (53%)
 Frame = +2

Query: 161 PGGTRGSTQARRWALPRRYGSLPCASATLSAVLVREIIG 277
           P G  GS     W +  +YGSLP A A L A LVR + G
Sbjct: 688 PDGVEGSVLLLDWRVAAQYGSLPQA-ARLRADLVRALDG 725

>NRP1_XENLA (P28824) Neuropilin-1 precursor (A5 protein) (A5 antigen)|
          Length = 928

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = +3

Query: 114 LRLFAPGRDAASSSATPAVPEAVPRRGGGRCRGDTVRCHA 233
           LRL   G +  + ++ P  PE     GG  C GD   CH+
Sbjct: 577 LRLELLGCEVETPTSIPTTPEV---NGGDECEGDLANCHS 613

>IF35_HUMAN (O00303) Eukaryotic translation initiation factor 3 subunit 5|
           (eIF-3 epsilon) (eIF3 p47 subunit) (eIF3f)
          Length = 357

 Score = 29.3 bits (64), Expect = 5.9
 Identities = 23/62 (37%), Positives = 29/62 (46%)
 Frame = +3

Query: 45  AAPATTSLPLSPAIKKA*PIQNTLRLFAPGRDAASSSATPAVPEAVPRRGGGRCRGDTVR 224
           AAPA++S P + A   A P Q      AP +  A +   PA+P   P   GGR     VR
Sbjct: 41  AAPASSSDPAAAAAATAAPGQTPASAQAPAQTPAPALPGPALPGPFP---GGR----VVR 93

Query: 225 CH 230
            H
Sbjct: 94  LH 95

>NOVA2_HUMAN (Q9UNW9) RNA-binding protein Nova-2 (Neuro-oncological ventral|
           antigen 2) (Astrocytic NOVA1-like RNA-binding protein)
          Length = 492

 Score = 29.3 bits (64), Expect = 5.9
 Identities = 18/51 (35%), Positives = 23/51 (45%)
 Frame = -2

Query: 187 LGTASGTAGVAEELAASLPGAKRRSVFWIG*AFLMAGESGSDVVAGAAPPP 35
           LG    +A  +  LAA   GA   +          AGE+G+    GAAPPP
Sbjct: 296 LGLGLNSAAASGVLAAVAAGANPAAAAAANLLASYAGEAGAGPAGGAAPPP 346

>ENC1_MOUSE (O35709) Ectoderm-neural cortex 1 protein (ENC-1)|
          Length = 589

 Score = 29.3 bits (64), Expect = 5.9
 Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 5/52 (9%)
 Frame = +3

Query: 18  RHCRPLGGGAAPATTSLPLSPA-----IKKA*PIQNTLRLFAPGRDAASSSA 158
           +HC  + GG   AT  LP SP+     +++  P  N   + AP R+  S++A
Sbjct: 387 KHCLYVVGGHTAATGCLPASPSVSLKQVEQYDPTTNKWTMVAPLREGVSNAA 438

>DBP9_ASPOR (Q2UFL0) ATP-dependent RNA helicase dbp9 (EC 3.6.1.-)|
          Length = 605

 Score = 28.9 bits (63), Expect = 7.7
 Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
 Frame = +3

Query: 54  ATTSLPLSPAIKKA*PIQNTLRLFAP--GRDAASSSATPAVPEAVPR 188
           ATT L L P  + A  +QN +  FA   G+D  S + T  V +AV R
Sbjct: 101 ATTGLILVPTRELAEQVQNVVTTFAAFCGKDVRSVNLTQKVSDAVQR 147

>VASP_CANFA (P50551) Vasodilator-stimulated phosphoprotein (VASP)|
          Length = 383

 Score = 28.9 bits (63), Expect = 7.7
 Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
 Frame = -2

Query: 199 PPPRLGTASGTAGV---AEELAASLPGAKRRSVFWIG*AFLMAGESGSDVVAGAAPPPRG 29
           P P L TA GT+G    A  LAA++ GAK R V            S  +  +G  P P+ 
Sbjct: 208 PAPPLPTAQGTSGGGTGAPGLAAAIAGAKLRKV------------SKQEEASGGPPVPKA 255

Query: 28  RQWRA 14
              R+
Sbjct: 256 ESTRS 260

>DACH1_MOUSE (Q9QYB2) Dachshund homolog 1 (Dach1)|
          Length = 751

 Score = 28.9 bits (63), Expect = 7.7
 Identities = 19/57 (33%), Positives = 26/57 (45%)
 Frame = +3

Query: 42  GAAPATTSLPLSPAIKKA*PIQNTLRLFAPGRDAASSSATPAVPEAVPRRGGGRCRG 212
           G   +T+S   SPA     P  +   LF P   A+S+S++ A     P  GGG   G
Sbjct: 28  GTTTSTSSATSSPAPSIGPPASSGPTLFRPEPIASSASSSAAATVTSPGGGGGGSGG 84


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,391,448
Number of Sequences: 219361
Number of extensions: 768138
Number of successful extensions: 3047
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2917
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3041
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3420806017
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)