| Clone Name | baal38a19 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_473921.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2331 Score = 398 bits (201), Expect = e-108 Identities = 336/381 (88%) Strand = Plus / Plus Query: 1 atggaggtgttgattcgcttaatcggcgctgatgaaaccatgtattcaagttattcggat 60 |||||||||||||| ||||| ||||| ||||||||||| |||||||| ||||| || Sbjct: 490 atggaggtgttgatccgcttgatcggtgctgatgaaactatgtattctggttatgttgac 549 Query: 61 tcaatgcaatggttagatgacatacaagtccttgagatgattgttgacaagttcagctca 120 |||||||||||||| ||||||||| | ||||||||||||||||||||||||||||| ||| Sbjct: 550 tcaatgcaatggttggatgacataaaggtccttgagatgattgttgacaagttcagttca 609 Query: 121 tccgattctgctgaggttcatgcaaatgctgctgaaatcctatgtgcagtgactagatat 180 || |||||| |||||||||||||||| |||||||||||||| ||||| | ||||||||| Sbjct: 610 tctgattctcctgaggttcatgcaaacgctgctgaaatcctttgtgcgataactagatat 669 Query: 181 gcccctccagcacttgctacaaaaatttccagtcctagttttgtggggagattgtttcat 240 ||||| ||||| |||||||||||||| |||||| | |||||||||| |||| | ||||| Sbjct: 670 gccccaccagcgcttgctacaaaaatatccagtgcaagttttgtggcgagactatttcac 729 Query: 241 catgcttttgaagattcaagacctaaatcagtgctggtccactcactgtcagtgtgcata 300 |||||||||||||||||||| |||||||| ||| ||||||||||| |||||||||||||| Sbjct: 730 catgcttttgaagattcaaggcctaaatcggtgttggtccactcattgtcagtgtgcata 789 Query: 301 tctttgttagatcctaagagacttgtatctgcgtcctaccaagctttccgtagtcagtta 360 |||||||| ||||||||||||||||||| || |||||||||| |||||||||||| || Sbjct: 790 tctttgttggatcctaagagacttgtattagcttcctaccaagttttccgtagtcaacta 849 Query: 361 agtcacggaacgttggtcact 381 || || | ||| ||||||||| Sbjct: 850 agccatgcaacattggtcact 870
>dbj|AK066330.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013061K16, full insert sequence Length = 2332 Score = 398 bits (201), Expect = e-108 Identities = 336/381 (88%) Strand = Plus / Plus Query: 1 atggaggtgttgattcgcttaatcggcgctgatgaaaccatgtattcaagttattcggat 60 |||||||||||||| ||||| ||||| ||||||||||| |||||||| ||||| || Sbjct: 838 atggaggtgttgatccgcttgatcggtgctgatgaaactatgtattctggttatgttgac 897 Query: 61 tcaatgcaatggttagatgacatacaagtccttgagatgattgttgacaagttcagctca 120 |||||||||||||| ||||||||| | ||||||||||||||||||||||||||||| ||| Sbjct: 898 tcaatgcaatggttggatgacataaaggtccttgagatgattgttgacaagttcagttca 957 Query: 121 tccgattctgctgaggttcatgcaaatgctgctgaaatcctatgtgcagtgactagatat 180 || |||||| |||||||||||||||| |||||||||||||| ||||| | ||||||||| Sbjct: 958 tctgattctcctgaggttcatgcaaacgctgctgaaatcctttgtgcgataactagatat 1017 Query: 181 gcccctccagcacttgctacaaaaatttccagtcctagttttgtggggagattgtttcat 240 ||||| ||||| |||||||||||||| |||||| | |||||||||| |||| | ||||| Sbjct: 1018 gccccaccagcgcttgctacaaaaatatccagtgcaagttttgtggcgagactatttcac 1077 Query: 241 catgcttttgaagattcaagacctaaatcagtgctggtccactcactgtcagtgtgcata 300 |||||||||||||||||||| |||||||| ||| ||||||||||| |||||||||||||| Sbjct: 1078 catgcttttgaagattcaaggcctaaatcggtgttggtccactcattgtcagtgtgcata 1137 Query: 301 tctttgttagatcctaagagacttgtatctgcgtcctaccaagctttccgtagtcagtta 360 |||||||| ||||||||||||||||||| || |||||||||| |||||||||||| || Sbjct: 1138 tctttgttggatcctaagagacttgtattagcttcctaccaagttttccgtagtcaacta 1197 Query: 361 agtcacggaacgttggtcact 381 || || | ||| ||||||||| Sbjct: 1198 agccatgcaacattggtcact 1218
>emb|AL662970.2|OSJN00174 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0058K23, complete sequence Length = 164805 Score = 176 bits (89), Expect = 3e-41 Identities = 146/165 (88%) Strand = Plus / Plus Query: 217 agttttgtggggagattgtttcatcatgcttttgaagattcaagacctaaatcagtgctg 276 |||||||||| |||| | ||||| |||||||||||||||||||| |||||||| ||| || Sbjct: 148284 agttttgtggcgagactatttcaccatgcttttgaagattcaaggcctaaatcggtgttg 148343 Query: 277 gtccactcactgtcagtgtgcatatctttgttagatcctaagagacttgtatctgcgtcc 336 ||||||||| |||||||||||||||||||||| ||||||||||||||||||| || ||| Sbjct: 148344 gtccactcattgtcagtgtgcatatctttgttggatcctaagagacttgtattagcttcc 148403 Query: 337 taccaagctttccgtagtcagttaagtcacggaacgttggtcact 381 ||||||| |||||||||||| |||| || | ||| ||||||||| Sbjct: 148404 taccaagttttccgtagtcaactaagccatgcaacattggtcact 148448 Score = 123 bits (62), Expect = 4e-25 Identities = 104/118 (88%) Strand = Plus / Plus Query: 5 aggtgttgattcgcttaatcggcgctgatgaaaccatgtattcaagttattcggattcaa 64 |||||||||| ||||| ||||| ||||||||||| |||||||| ||||| || |||| Sbjct: 147591 aggtgttgatccgcttgatcggtgctgatgaaactatgtattctggttatgttgactcaa 147650 Query: 65 tgcaatggttagatgacatacaagtccttgagatgattgttgacaagttcagctcatc 122 |||||||||| ||||||||| | ||||||||||||||||||||||||||||| ||||| Sbjct: 147651 tgcaatggttggatgacataaaggtccttgagatgattgttgacaagttcagttcatc 147708 Score = 107 bits (54), Expect = 3e-20 Identities = 81/90 (90%) Strand = Plus / Plus Query: 124 gattctgctgaggttcatgcaaatgctgctgaaatcctatgtgcagtgactagatatgcc 183 |||||| |||||||||||||||| |||||||||||||| ||||| | |||||||||||| Sbjct: 148072 gattctcctgaggttcatgcaaacgctgctgaaatcctttgtgcgataactagatatgcc 148131 Query: 184 cctccagcacttgctacaaaaatttccagt 213 || ||||| |||||||||||||| |||||| Sbjct: 148132 ccaccagcgcttgctacaaaaatatccagt 148161
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 176 bits (89), Expect = 3e-41 Identities = 146/165 (88%) Strand = Plus / Plus Query: 217 agttttgtggggagattgtttcatcatgcttttgaagattcaagacctaaatcagtgctg 276 |||||||||| |||| | ||||| |||||||||||||||||||| |||||||| ||| || Sbjct: 31570601 agttttgtggcgagactatttcaccatgcttttgaagattcaaggcctaaatcggtgttg 31570660 Query: 277 gtccactcactgtcagtgtgcatatctttgttagatcctaagagacttgtatctgcgtcc 336 ||||||||| |||||||||||||||||||||| ||||||||||||||||||| || ||| Sbjct: 31570661 gtccactcattgtcagtgtgcatatctttgttggatcctaagagacttgtattagcttcc 31570720 Query: 337 taccaagctttccgtagtcagttaagtcacggaacgttggtcact 381 ||||||| |||||||||||| |||| || | ||| ||||||||| Sbjct: 31570721 taccaagttttccgtagtcaactaagccatgcaacattggtcact 31570765 Score = 123 bits (62), Expect = 4e-25 Identities = 104/118 (88%) Strand = Plus / Plus Query: 5 aggtgttgattcgcttaatcggcgctgatgaaaccatgtattcaagttattcggattcaa 64 |||||||||| ||||| ||||| ||||||||||| |||||||| ||||| || |||| Sbjct: 31569908 aggtgttgatccgcttgatcggtgctgatgaaactatgtattctggttatgttgactcaa 31569967 Query: 65 tgcaatggttagatgacatacaagtccttgagatgattgttgacaagttcagctcatc 122 |||||||||| ||||||||| | ||||||||||||||||||||||||||||| ||||| Sbjct: 31569968 tgcaatggttggatgacataaaggtccttgagatgattgttgacaagttcagttcatc 31570025 Score = 107 bits (54), Expect = 3e-20 Identities = 81/90 (90%) Strand = Plus / Plus Query: 124 gattctgctgaggttcatgcaaatgctgctgaaatcctatgtgcagtgactagatatgcc 183 |||||| |||||||||||||||| |||||||||||||| ||||| | |||||||||||| Sbjct: 31570389 gattctcctgaggttcatgcaaacgctgctgaaatcctttgtgcgataactagatatgcc 31570448 Query: 184 cctccagcacttgctacaaaaatttccagt 213 || ||||| |||||||||||||| |||||| Sbjct: 31570449 ccaccagcgcttgctacaaaaatatccagt 31570478
>ref|NM_192531.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2370 Score = 101 bits (51), Expect = 2e-18 Identities = 183/227 (80%) Strand = Plus / Plus Query: 88 gtccttgagatgattgttgacaagttcagctcatccgattctgctgaggttcatgcaaat 147 |||||||| ||||||| ||| ||||| |||||||| || || |||| || ||||| ||| Sbjct: 655 gtccttgaaatgattgctgataagtttagctcatcggactcccctgaagtgcatgccaat 714 Query: 148 gctgctgaaatcctatgtgcagtgactagatatgcccctccagcacttgctacaaaaatt 207 ||||| ||||| || ||||| |||||| ||| ||| |||||| | |||||| |||| || Sbjct: 715 gctgccgaaattctttgtgccgtgactcgatgtgctcctccatctcttgctgcaaagata 774 Query: 208 tccagtcctagttttgtggggagattgtttcatcatgcttttgaagattcaagacctaaa 267 | ||| || |||||||| ||||| | |||| |||||| ||||||| ||||| || ||| Sbjct: 775 tgcagcccaagttttgttgggaggctatttcgtcatgcacttgaagaatcaaggcccaaa 834 Query: 268 tcagtgctggtccactcactgtcagtgtgcatatctttgttagatcc 314 || || || || || ||| ||||||||||||||||| |||| ||||| Sbjct: 835 tccgttctagttcattcattgtcagtgtgcatatctctgttggatcc 881
>ref|XM_476020.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2313 Score = 85.7 bits (43), Expect = 1e-13 Identities = 181/227 (79%) Strand = Plus / Plus Query: 97 atgattgttgacaagttcagctcatccgattctgctgaggttcatgcaaatgctgctgaa 156 |||||||| || || || |||||||| ||||| |||| || || || |||||||| ||| Sbjct: 586 atgattgtggataaatttagctcatctgattcccctgaagtacacgccaatgctgcagaa 645 Query: 157 atcctatgtgcagtgactagatatgcccctccagcacttgctacaaaaatttccagtcct 216 || || | |||||||||| ||| |||||||| || || ||| ||||||| | ||| || Sbjct: 646 attctttctgcagtgactcgatgcgcccctcctgctctcgctgcaaaaatatgcagccca 705 Query: 217 agttttgtggggagattgtttcatcatgcttttgaagattcaagacctaaatcagtgctg 276 |||||||| |||||||| |||| ||||||| || |||| ||| | || ||||| || ||| Sbjct: 706 agttttgttgggagattatttcgtcatgctcttcaagaatcacgccccaaatctgtcctg 765 Query: 277 gtccactcactgtcagtgtgcatatctttgttagatcctaagagact 323 || || ||| | ||||| || ||||||||||| ||||| || ||||| Sbjct: 766 gttcattcattatcagtatgtatatctttgttggatccaaaaagact 812
>dbj|AK099566.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013034M16, full insert sequence Length = 3155 Score = 85.7 bits (43), Expect = 1e-13 Identities = 181/227 (79%) Strand = Plus / Plus Query: 97 atgattgttgacaagttcagctcatccgattctgctgaggttcatgcaaatgctgctgaa 156 |||||||| || || || |||||||| ||||| |||| || || || |||||||| ||| Sbjct: 809 atgattgtggataaatttagctcatctgattcccctgaagtacacgccaatgctgcagaa 868 Query: 157 atcctatgtgcagtgactagatatgcccctccagcacttgctacaaaaatttccagtcct 216 || || | |||||||||| ||| |||||||| || || ||| ||||||| | ||| || Sbjct: 869 attctttctgcagtgactcgatgcgcccctcctgctctcgctgcaaaaatatgcagccca 928 Query: 217 agttttgtggggagattgtttcatcatgcttttgaagattcaagacctaaatcagtgctg 276 |||||||| |||||||| |||| ||||||| || |||| ||| | || ||||| || ||| Sbjct: 929 agttttgttgggagattatttcgtcatgctcttcaagaatcacgccccaaatctgtcctg 988 Query: 277 gtccactcactgtcagtgtgcatatctttgttagatcctaagagact 323 || || ||| | ||||| || ||||||||||| ||||| || ||||| Sbjct: 989 gttcattcattatcagtatgtatatctttgttggatccaaaaagact 1035
>dbj|AK071878.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013039C12, full insert sequence Length = 2733 Score = 85.7 bits (43), Expect = 1e-13 Identities = 181/227 (79%) Strand = Plus / Plus Query: 97 atgattgttgacaagttcagctcatccgattctgctgaggttcatgcaaatgctgctgaa 156 |||||||| || || || |||||||| ||||| |||| || || || |||||||| ||| Sbjct: 796 atgattgtggataaatttagctcatctgattcccctgaagtacacgccaatgctgcagaa 855 Query: 157 atcctatgtgcagtgactagatatgcccctccagcacttgctacaaaaatttccagtcct 216 || || | |||||||||| ||| |||||||| || || ||| ||||||| | ||| || Sbjct: 856 attctttctgcagtgactcgatgcgcccctcctgctctcgctgcaaaaatatgcagccca 915 Query: 217 agttttgtggggagattgtttcatcatgcttttgaagattcaagacctaaatcagtgctg 276 |||||||| |||||||| |||| ||||||| || |||| ||| | || ||||| || ||| Sbjct: 916 agttttgttgggagattatttcgtcatgctcttcaagaatcacgccccaaatctgtcctg 975 Query: 277 gtccactcactgtcagtgtgcatatctttgttagatcctaagagact 323 || || ||| | ||||| || ||||||||||| ||||| || ||||| Sbjct: 976 gttcattcattatcagtatgtatatctttgttggatccaaaaagact 1022
>gb|AC130728.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0663C08, complete sequence Length = 142196 Score = 54.0 bits (27), Expect = 3e-04 Identities = 87/107 (81%) Strand = Plus / Plus Query: 217 agttttgtggggagattgtttcatcatgcttttgaagattcaagacctaaatcagtgctg 276 |||||||| |||||||| |||| ||||||| || |||| ||| | || ||||| || ||| Sbjct: 82135 agttttgttgggagattatttcgtcatgctcttcaagaatcacgccccaaatctgtcctg 82194 Query: 277 gtccactcactgtcagtgtgcatatctttgttagatcctaagagact 323 || || ||| | ||||| || ||||||||||| ||||| || ||||| Sbjct: 82195 gttcattcattatcagtatgtatatctttgttggatccaaaaagact 82241
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 54.0 bits (27), Expect = 3e-04 Identities = 87/107 (81%) Strand = Plus / Plus Query: 217 agttttgtggggagattgtttcatcatgcttttgaagattcaagacctaaatcagtgctg 276 |||||||| |||||||| |||| ||||||| || |||| ||| | || ||||| || ||| Sbjct: 29303478 agttttgttgggagattatttcgtcatgctcttcaagaatcacgccccaaatctgtcctg 29303537 Query: 277 gtccactcactgtcagtgtgcatatctttgttagatcctaagagact 323 || || ||| | ||||| || ||||||||||| ||||| || ||||| Sbjct: 29303538 gttcattcattatcagtatgtatatctttgttggatccaaaaagact 29303584
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 52.0 bits (26), Expect = 0.001 Identities = 80/98 (81%) Strand = Plus / Plus Query: 217 agttttgtggggagattgtttcatcatgcttttgaagattcaagacctaaatcagtgctg 276 |||||||| ||||| | |||| |||||| ||||||| ||||| || ||||| || || Sbjct: 22774809 agttttgttgggaggctatttcgtcatgcacttgaagaatcaaggcccaaatccgttcta 22774868 Query: 277 gtccactcactgtcagtgtgcatatctttgttagatcc 314 || || ||| ||||||||||||||||| |||| ||||| Sbjct: 22774869 gttcattcattgtcagtgtgcatatctctgttggatcc 22774906
>dbj|AP003492.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0712E02 Length = 158084 Score = 52.0 bits (26), Expect = 0.001 Identities = 80/98 (81%) Strand = Plus / Plus Query: 217 agttttgtggggagattgtttcatcatgcttttgaagattcaagacctaaatcagtgctg 276 |||||||| ||||| | |||| |||||| ||||||| ||||| || ||||| || || Sbjct: 92198 agttttgttgggaggctatttcgtcatgcacttgaagaatcaaggcccaaatccgttcta 92257 Query: 277 gtccactcactgtcagtgtgcatatctttgttagatcc 314 || || ||| ||||||||||||||||| |||| ||||| Sbjct: 92258 gttcattcattgtcagtgtgcatatctctgttggatcc 92295
>ref|NM_114388.2| Arabidopsis thaliana unknown protein AT3G45190 mRNA, complete cds Length = 2493 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Plus Query: 136 gttcatgcaaatgctgctgaaa 157 |||||||||||||||||||||| Sbjct: 625 gttcatgcaaatgctgctgaaa 646
>emb|AL138649.1|ATT14D3 Arabidopsis thaliana DNA chromosome 3, BAC clone T14D3 Length = 88010 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 136 gttcatgcaaatgctgctgaaa 157 |||||||||||||||||||||| Sbjct: 60357 gttcatgcaaatgctgctgaaa 60336
>ref|NM_102783.4| Arabidopsis thaliana unknown protein AT1G30470 mRNA, complete cds Length = 2939 Score = 42.1 bits (21), Expect = 1.3 Identities = 54/65 (83%) Strand = Plus / Plus Query: 94 gagatgattgttgacaagttcagctcatccgattctgctgaggttcatgcaaatgctgct 153 ||||||||||| |||||||| |||| || || ||| | ||||| ||||| ||||| ||| Sbjct: 835 gagatgattgtggacaagtttggctcttcggagtctcccgaggtacatgccaatgcagct 894 Query: 154 gaaat 158 ||||| Sbjct: 895 gaaat 899
>ref|XM_706012.1| Candida albicans SC5314 hypothetical protein (CaO19.13679), mRNA Length = 846 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 tgcttttgaagattcaagac 262 |||||||||||||||||||| Sbjct: 57 tgcttttgaagattcaagac 76
>ref|XM_705995.1| Candida albicans SC5314 hypothetical protein (CaO19.6302), mRNA Length = 846 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 tgcttttgaagattcaagac 262 |||||||||||||||||||| Sbjct: 57 tgcttttgaagattcaagac 76
>gb|AC115304.3| Mus musculus BAC clone RP24-156K1 from 15, complete sequence Length = 144026 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 146 atgctgctgaaatcctatgt 165 |||||||||||||||||||| Sbjct: 41351 atgctgctgaaatcctatgt 41332
>gb|AC083928.11| Homo sapiens chromosome 8, clone RP11-77C4, complete sequence Length = 144023 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 tgatgaaaccatgtattcaa 49 |||||||||||||||||||| Sbjct: 3921 tgatgaaaccatgtattcaa 3940
>emb|AL157827.17| Human DNA sequence from clone RP11-19J3 on chromosome 9q21.33-22.31 Contains the 5' end of the ASPN gene for asporin (LRR class 1), the ECM2 gene for female organ and adipocyte specific extracellular matrix protein 2, a pseudogene similar to part of cytochrome c oxidase I (MTCO1), the 3' end of a novel gene, the 3' end of the C9orf12 gene and a CpG island, complete sequence Length = 167734 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 276 ggtccactcactgtcagtgt 295 |||||||||||||||||||| Sbjct: 44840 ggtccactcactgtcagtgt 44859
>gb|AC090154.19| Homo sapiens chromosome 8, clone RP11-705C3, complete sequence Length = 144615 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 tgatgaaaccatgtattcaa 49 |||||||||||||||||||| Sbjct: 3904 tgatgaaaccatgtattcaa 3885
>gb|AC016820.9| Homo sapiens chromosome 10 clone RP11-31E13, complete sequence Length = 194364 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 tggtccactcactgtcagtg 294 |||||||||||||||||||| Sbjct: 109036 tggtccactcactgtcagtg 109055
>gb|AC006371.2|AC006371 Homo sapiens BAC clone RP11-304C24 from Y, complete sequence Length = 202354 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 gattgttgacaagttcagct 118 |||||||||||||||||||| Sbjct: 199300 gattgttgacaagttcagct 199319
>emb|Z81107.1|CER07H5 Caenorhabditis elegans Cosmid R07H5, complete sequence Length = 33802 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 235 tttcatcatgcttttgaagattcaagac 262 ||||||| |||| ||||||||||||||| Sbjct: 5826 tttcatcttgctgttgaagattcaagac 5853
>gb|AC126804.3| Mus musculus BAC clone RP23-3F1 from 9, complete sequence Length = 223991 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 tcagtgtgcatatctttgtt 308 |||||||||||||||||||| Sbjct: 150418 tcagtgtgcatatctttgtt 150437
>gb|AC147366.5| Mus musculus BAC clone RP23-386J3 from 15, complete sequence Length = 175781 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 atgctgctgaaatcctatgt 165 |||||||||||||||||||| Sbjct: 30264 atgctgctgaaatcctatgt 30283 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,140,051 Number of Sequences: 3902068 Number of extensions: 3140051 Number of successful extensions: 52478 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 26 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 52391 Number of HSP's gapped (non-prelim): 87 length of query: 381 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 359 effective length of database: 17,147,199,772 effective search space: 6155844718148 effective search space used: 6155844718148 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)