>ref|NM_193993.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 813

 Score =  119 bits (60), Expect = 5e-24
 Identities = 74/79 (93%)
 Strand = Plus / Plus

                                                                       
Query: 208 ccgacggcggagtcgtgcgtcaacctcggactcgagttcttctccaagggcagggngaag 267
           |||||||||||||||||||||||||| ||||||||| |||||||||||||||||| ||||
Sbjct: 226 ccgacggcggagtcgtgcgtcaacctgggactcgagctcttctccaagggcagggtgaag 285

                              
Query: 268 gacgcacttgaacaatttg 286
           || || |||||||||||||
Sbjct: 286 gatgctcttgaacaatttg 304

>dbj|AK072081.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116G03, full
           insert sequence
          Length = 1683

 Score =  119 bits (60), Expect = 5e-24
 Identities = 74/79 (93%)
 Strand = Plus / Plus

                                                                       
Query: 208 ccgacggcggagtcgtgcgtcaacctcggactcgagttcttctccaagggcagggngaag 267
           |||||||||||||||||||||||||| ||||||||| |||||||||||||||||| ||||
Sbjct: 249 ccgacggcggagtcgtgcgtcaacctgggactcgagctcttctccaagggcagggtgaag 308

                              
Query: 268 gacgcacttgaacaatttg 286
           || || |||||||||||||
Sbjct: 309 gatgctcttgaacaatttg 327

>dbj|AK060388.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-009-G10, full
           insert sequence
          Length = 1542

 Score =  119 bits (60), Expect = 5e-24
 Identities = 74/79 (93%)
 Strand = Plus / Plus

                                                                       
Query: 208 ccgacggcggagtcgtgcgtcaacctcggactcgagttcttctccaagggcagggngaag 267
           |||||||||||||||||||||||||| ||||||||| |||||||||||||||||| ||||
Sbjct: 251 ccgacggcggagtcgtgcgtcaacctgggactcgagctcttctccaagggcagggtgaag 310

                              
Query: 268 gacgcacttgaacaatttg 286
           || || |||||||||||||
Sbjct: 311 gatgctcttgaacaatttg 329

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 93.7 bits (47), Expect = 3e-16
 Identities = 53/55 (96%)
 Strand = Plus / Minus

                                                                       
Query: 208      ccgacggcggagtcgtgcgtcaacctcggactcgagttcttctccaagggcaggg 262
                |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 14495762 ccgacggcggagtcgtgcgtcaacctgggactcgagctcttctccaagggcaggg 14495708

>dbj|AP003275.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0514H03
          Length = 167230

 Score = 93.7 bits (47), Expect = 3e-16
 Identities = 53/55 (96%)
 Strand = Plus / Minus

                                                                    
Query: 208   ccgacggcggagtcgtgcgtcaacctcggactcgagttcttctccaagggcaggg 262
             |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 55075 ccgacggcggagtcgtgcgtcaacctgggactcgagctcttctccaagggcaggg 55021

>gb|DQ210445.1| Maxillaria concavilabia 18S ribosomal RNA gene, partial sequence;
           internal transcribed spacer 1, 5.8S ribosomal RNA gene,
           and internal transcribed spacer 2, complete sequence;
           and 26S ribosomal RNA gene, partial sequence
          Length = 766

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 158 cgtcgcccccgtctccccctc 178
           |||||||||||||||||||||
Sbjct: 136 cgtcgcccccgtctccccctc 156

>gb|DQ210307.1| Maxillaria cerifera 18S ribosomal RNA gene, partial sequence;
           internal transcribed spacer 1, 5.8S ribosomal RNA gene,
           and internal transcribed spacer 2, complete sequence;
           and 26S ribosomal RNA gene, partial sequence
          Length = 773

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 158 cgtcgcccccgtctccccctc 178
           |||||||||||||||||||||
Sbjct: 136 cgtcgcccccgtctccccctc 156

>gb|DQ210167.1| Maxillaria notylioglossa 18S ribosomal RNA gene, partial sequence;
           internal transcribed spacer 1, 5.8S ribosomal RNA gene,
           and internal transcribed spacer 2, complete sequence;
           and 26S ribosomal RNA gene, partial sequence
          Length = 774

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 158 cgtcgcccccgtctccccctc 178
           |||||||||||||||||||||
Sbjct: 136 cgtcgcccccgtctccccctc 156

>gb|DQ210117.1| Maxillaria cerifera 18S ribosomal RNA gene, partial sequence;
           internal transcribed spacer 1, 5.8S ribosomal RNA gene,
           and internal transcribed spacer 2, complete sequence;
           and 26S ribosomal RNA gene, partial sequence
          Length = 776

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 158 cgtcgcccccgtctccccctc 178
           |||||||||||||||||||||
Sbjct: 136 cgtcgcccccgtctccccctc 156

>gb|DQ210114.1| Maxillaria notylioglossa 18S ribosomal RNA gene, partial sequence;
           internal transcribed spacer 1, 5.8S ribosomal RNA gene,
           and internal transcribed spacer 2, complete sequence;
           and 26S ribosomal RNA gene, partial sequence
          Length = 774

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 158 cgtcgcccccgtctccccctc 178
           |||||||||||||||||||||
Sbjct: 136 cgtcgcccccgtctccccctc 156

>gb|DQ210045.1| Maxillaria neglecta 18S ribosomal RNA gene, partial sequence;
           internal transcribed spacer 1, 5.8S ribosomal RNA gene,
           and internal transcribed spacer 2, complete sequence;
           and 26S ribosomal RNA gene, partial sequence
          Length = 766

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 158 cgtcgcccccgtctccccctc 178
           |||||||||||||||||||||
Sbjct: 136 cgtcgcccccgtctccccctc 156

>gb|AC108050.5| Homo sapiens BAC clone RP11-331M18 from 4, complete sequence
          Length = 214250

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 24   aacccacctttcccttctctc 44
            |||||||||||||||||||||
Sbjct: 5189 aacccacctttcccttctctc 5169

>gb|AY190946.1| Drosophila pseudoobscura clone DPSF01_27_F17 (D1456) genomic sequence
          Length = 44117

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 202   gcggctccgacggcggagtcg 222
             |||||||||||||||||||||
Sbjct: 28957 gcggctccgacggcggagtcg 28937

>gb|AY168637.1| Baboon herpesvirus 2 strain X313/860 DNA polymerase gene, partial
           cds
          Length = 1702

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 148 aacgcgtcctcgtcgcccccg 168
           |||||||||||||||||||||
Sbjct: 515 aacgcgtcctcgtcgcccccg 495

>gb|DQ149153.1| Cercopithecine herpesvirus 16 strain X313, complete genome
          Length = 156487

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 148   aacgcgtcctcgtcgcccccg 168
             |||||||||||||||||||||
Sbjct: 65359 aacgcgtcctcgtcgcccccg 65339

>dbj|AB242209.1| Pichia minuta var. minuta OmAOX1 gene for alcohol oxidase, complete
           cds
          Length = 5966

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 234 cggactcgagttcttctccaa 254
           |||||||||||||||||||||
Sbjct: 825 cggactcgagttcttctccaa 805

>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 44      cggccggcggcggaatccccaacc 67
               ||||| ||||||||||||||||||
Sbjct: 3837167 cggcccgcggcggaatccccaacc 3837190

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 160      tcgcccccgtctccccctcc 179
                ||||||||||||||||||||
Sbjct: 23668544 tcgcccccgtctccccctcc 23668563

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 191     aggcggtcgaggcggctccg 210
               ||||||||||||||||||||
Sbjct: 2942267 aggcggtcgaggcggctccg 2942248

>dbj|AK111522.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002M11, full
           insert sequence
          Length = 2776

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 160 tcgcccccgtctccccctcc 179
           ||||||||||||||||||||
Sbjct: 229 tcgcccccgtctccccctcc 248

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 160      tcgcccccgtctccccctcc 179
                ||||||||||||||||||||
Sbjct: 23596731 tcgcccccgtctccccctcc 23596750

>emb|AL772425.7|CNS08CA3 Oryza sativa chromosome 12, . BAC OJ1396_C02 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 157690

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 160   tcgcccccgtctccccctcc 179
             ||||||||||||||||||||
Sbjct: 37866 tcgcccccgtctccccctcc 37847

>emb|AL844878.4|CNS08CB1 Oryza sativa chromosome 12, . BAC OSJNBb0036A19 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 128795

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 160   tcgcccccgtctccccctcc 179
             ||||||||||||||||||||
Sbjct: 87078 tcgcccccgtctccccctcc 87059


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,542,825
Number of Sequences: 3902068
Number of extensions: 1542825
Number of successful extensions: 30147
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 29955
Number of HSP's gapped (non-prelim): 192
length of query: 286
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 264
effective length of database: 17,147,199,772
effective search space: 4526860739808
effective search space used: 4526860739808
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)