ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal37i16 |
|---|---|
| Clone Library Name | barley_pub |
>Y798_METJA (Q58208) Hypothetical protein MJ0798| Length = 334 Score = 43.1 bits (100), Expect = 8e-04 Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 1/80 (1%) Frame = +2 Query: 227 EKAVEAAPT-AESCVNLGLEFFSKGRVKDALEQFDKALELNPNPTEAQAAFYNKACCHAY 403 +KA+E P + + + +F + K AL+ F+KAL+LNPN E + + + + Y Sbjct: 226 KKALELKPDDIDLILKVAFTYFKLKKYKHALKYFEKALKLNPNVFELEQIYESMGRIYIY 285 Query: 404 REESKKAADCLRIALRDYNL 463 E +KA +C L++ NL Sbjct: 286 LGEDEKAIECFE-KLKEINL 304 Score = 31.2 bits (69), Expect = 3.1 Identities = 19/59 (32%), Positives = 30/59 (50%) Frame = +2 Query: 272 LGLEFFSKGRVKDALEQFDKALELNPNPTEAQAAFYNKACCHAYREESKKAADCLRIAL 448 LG ++ K++++ F+K LELNPN EA Y E+ +KA + + AL Sbjct: 175 LGKSYYLMSDNKNSIKYFEKVLELNPNDVEALEYLGEL----YYEEDCEKAINYFKKAL 229
>Y1088_AQUAE (O67178) Hypothetical protein aq_1088| Length = 761 Score = 41.6 bits (96), Expect = 0.002 Identities = 22/60 (36%), Positives = 34/60 (56%) Frame = +2 Query: 272 LGLEFFSKGRVKDALEQFDKALELNPNPTEAQAAFYNKACCHAYREESKKAADCLRIALR 451 LG ++S+G++++A +++AL LNPN E YN H + E +KA D ALR Sbjct: 109 LGALYYSQGKLEEAQHYWERALSLNPNKVEI---LYNLGVLHLNKGELEKALDLFERALR 165 Score = 33.5 bits (75), Expect = 0.62 Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 1/48 (2%) Frame = +2 Query: 227 EKAVEAAPT-AESCVNLGLEFFSKGRVKDALEQFDKALELNPNPTEAQ 367 E+A+ P E NLG+ +KG ++ AL+ F++AL L P+ EA+ Sbjct: 127 ERALSLNPNKVEILYNLGVLHLNKGELEKALDLFERALRLKPDFREAE 174
>TTC14_HUMAN (Q96N46) Tetratricopeptide repeat protein 14 (TPR repeat protein| 14) Length = 770 Score = 41.6 bits (96), Expect = 0.002 Identities = 22/72 (30%), Positives = 40/72 (55%) Frame = +2 Query: 239 EAAPTAESCVNLGLEFFSKGRVKDALEQFDKALELNPNPTEAQAAFYNKACCHAYREESK 418 ++A A CV +G+++F GR DA+ +++KALE++ EA A + +A + Sbjct: 302 QSASWALKCVKIGVDYFKVGRHVDAMNEYNKALEIDKQNVEALVA---RGALYATKGSLN 358 Query: 419 KAADCLRIALRD 454 KA + +AL + Sbjct: 359 KAIEDFELALEN 370
>TTC14_MOUSE (Q9CSP9) Tetratricopeptide repeat protein 14 (TPR repeat protein| 14) (Fragment) Length = 441 Score = 41.6 bits (96), Expect = 0.002 Identities = 22/72 (30%), Positives = 40/72 (55%) Frame = +2 Query: 239 EAAPTAESCVNLGLEFFSKGRVKDALEQFDKALELNPNPTEAQAAFYNKACCHAYREESK 418 ++A A CV +G+++F GR DA+ +++KALE++ EA A + +A + Sbjct: 301 QSASWALKCVKIGVDYFKVGRHVDAMNEYNKALEIDKQNVEALVA---RGALYATKGSLN 357 Query: 419 KAADCLRIALRD 454 KA + +AL + Sbjct: 358 KAIEDFELALEN 369
>YCF3_CYAPA (P48191) Photosystem I assembly protein ycf3| Length = 173 Score = 40.0 bits (92), Expect = 0.007 Identities = 25/71 (35%), Positives = 35/71 (49%) Frame = +2 Query: 275 GLEFFSKGRVKDALEQFDKALELNPNPTEAQAAFYNKACCHAYREESKKAADCLRIALRD 454 G+ S+G +ALE + +AL L +P + FYN A H + KA + R AL D Sbjct: 42 GMSAQSEGAYAEALENYYEALRLEEDPYDKSYTFYNIALIHTSNGDQTKALEYYRQAL-D 100 Query: 455 YNLKFGTVLND 487 N K LN+ Sbjct: 101 LNPKMPQALNN 111
>YCF3_SYNY3 (P74063) Photosystem I assembly protein ycf3| Length = 173 Score = 38.1 bits (87), Expect = 0.025 Identities = 21/71 (29%), Positives = 36/71 (50%) Frame = +2 Query: 275 GLEFFSKGRVKDALEQFDKALELNPNPTEAQAAFYNKACCHAYREESKKAADCLRIALRD 454 G+ + G +AL+ +++AL L NP + YN A HA + +KA + A+ + Sbjct: 42 GMSAQADGEYAEALDNYEEALRLEENPNDRSYILYNMALIHASNGDHEKALGLYQEAI-E 100 Query: 455 YNLKFGTVLND 487 N K + LN+ Sbjct: 101 LNPKMPSALNN 111
>YCF3_SYNEL (Q8DIQ6) Photosystem I assembly protein ycf3| Length = 173 Score = 37.7 bits (86), Expect = 0.033 Identities = 23/71 (32%), Positives = 34/71 (47%) Frame = +2 Query: 275 GLEFFSKGRVKDALEQFDKALELNPNPTEAQAAFYNKACCHAYREESKKAADCLRIALRD 454 G+ + G +ALE + ALEL +PT+ YN HA E +KA + AL + Sbjct: 42 GMSAQADGEYAEALENYQAALELEEDPTDRSYILYNIGLIHASNGEHEKALEYYHQAL-E 100 Query: 455 YNLKFGTVLND 487 N + LN+ Sbjct: 101 LNPRMPQALNN 111 Score = 32.3 bits (72), Expect = 1.4 Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 2/45 (4%) Frame = +2 Query: 236 VEAAPTAESCV--NLGLEFFSKGRVKDALEQFDKALELNPNPTEA 364 +E PT S + N+GL S G + ALE + +ALELNP +A Sbjct: 64 LEEDPTDRSYILYNIGLIHASNGEHEKALEYYHQALELNPRMPQA 108
>Y572_METJA (Q57992) Hypothetical protein MJ0572| Length = 86 Score = 37.0 bits (84), Expect = 0.056 Identities = 23/60 (38%), Positives = 34/60 (56%) Frame = +2 Query: 254 AESCVNLGLEFFSKGRVKDALEQFDKALELNPNPTEAQAAFYNKACCHAYREESKKAADC 433 AE G+E +KG V+ ALE F+KA+ELNP + A++NKA ++A +C Sbjct: 8 AEYYYKKGVEVGNKGDVEKALEYFNKAIELNPFYRD---AWFNKALALRILGRYEEAREC 64
>YCF3_SYNPX (Q7U435) Photosystem I assembly protein ycf3| Length = 173 Score = 36.6 bits (83), Expect = 0.073 Identities = 20/58 (34%), Positives = 30/58 (51%) Frame = +2 Query: 275 GLEFFSKGRVKDALEQFDKALELNPNPTEAQAAFYNKACCHAYREESKKAADCLRIAL 448 GL + G +ALE +D+AL+L NPT+ N A + E ++A + R AL Sbjct: 42 GLSAQNDGDYAEALENYDEALKLEDNPTDRGETLKNMAIIYMSNGEEERAIETYRRAL 99
>SKI3_YEAST (P17883) Superkiller 3 protein| Length = 1432 Score = 35.0 bits (79), Expect = 0.21 Identities = 16/37 (43%), Positives = 26/37 (70%) Frame = +2 Query: 257 ESCVNLGLEFFSKGRVKDALEQFDKALELNPNPTEAQ 367 ES V LG + + GR++ +++ FDKA++L P+ T AQ Sbjct: 737 ESWVGLGQAYHACGRIEASIKVFDKAIQLRPSHTFAQ 773
>Y298_BORBU (Q57105) Hypothetical protein BB0298| Length = 230 Score = 34.3 bits (77), Expect = 0.36 Identities = 15/27 (55%), Positives = 19/27 (70%) Frame = +2 Query: 272 LGLEFFSKGRVKDALEQFDKALELNPN 352 +GLEFF G+ A+E F K LE+NPN Sbjct: 75 IGLEFFKLGQYGPAIEYFAKNLEINPN 101
>YCF3_CYAME (Q85FT1) Photosystem I assembly protein ycf3| Length = 158 Score = 33.5 bits (75), Expect = 0.62 Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 5/66 (7%) Frame = +2 Query: 269 NLGLEFFSKGRVKDALEQFDKALELNPNPTEAQ---AAFYNKACCHAYREES--KKAADC 433 N+GL + S G + ALE + +ALELNP +A A Y+K Y++E +KAA Sbjct: 77 NIGLIYASNGEDEQALEYYHQALELNPRLVQALNNIAVIYHKQGM-TYQDEQLLQKAAAY 135 Query: 434 LRIALR 451 R A++ Sbjct: 136 WRKAIQ 141
>OGT1_CAEEL (O18158) UDP-N-acetylglucosamine--peptide| N-acetylglucosaminyltransferase (EC 2.4.1.-) (O-GlcNAc) (OGT) Length = 1151 Score = 33.1 bits (74), Expect = 0.81 Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 1/46 (2%) Frame = +2 Query: 230 KAVEAAPT-AESCVNLGLEFFSKGRVKDALEQFDKALELNPNPTEA 364 KA+E P A + NLG F S+G + A+ F+KA+ L+PN +A Sbjct: 286 KAIETQPQFAVAWSNLGCVFNSQGEIWLAIHHFEKAVTLDPNFLDA 331 Score = 30.8 bits (68), Expect = 4.0 Identities = 15/37 (40%), Positives = 24/37 (64%) Frame = +2 Query: 254 AESCVNLGLEFFSKGRVKDALEQFDKALELNPNPTEA 364 AE+ NLG + KG+++DALE + A++L P +A Sbjct: 193 AEAYSNLGNYYKEKGQLQDALENYKLAVKLKPEFIDA 229
>YCF3_GUITH (O78490) Photosystem I assembly protein ycf3| Length = 172 Score = 32.7 bits (73), Expect = 1.1 Identities = 22/71 (30%), Positives = 33/71 (46%) Frame = +2 Query: 275 GLEFFSKGRVKDALEQFDKALELNPNPTEAQAAFYNKACCHAYREESKKAADCLRIALRD 454 G+ S+G +ALE + +AL L +P + YN +A E KA + AL D Sbjct: 42 GMSAQSEGEYAEALENYYEALRLEEDPYDRSYILYNIGLIYASNGEYVKALEYYHQAL-D 100 Query: 455 YNLKFGTVLND 487 N + LN+ Sbjct: 101 LNSQLPAALNN 111 Score = 30.0 bits (66), Expect = 6.9 Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 3/60 (5%) Frame = +2 Query: 269 NLGLEFFSKGRVKDALEQFDKALELNPNPTEAQAAFYNKACCHAY---REESKKAADCLR 439 N+GL + S G ALE + +AL+LN ++ AA N A + Y + KK D R Sbjct: 77 NIGLIYASNGEYVKALEYYHQALDLN---SQLPAALNNIAVIYHYQGVKASEKKELDLAR 133
>TTC6_HUMAN (Q86TZ1) Tetratricopeptide repeat protein 6 (TPR repeat protein 6)| Length = 520 Score = 32.3 bits (72), Expect = 1.4 Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 5/84 (5%) Frame = +2 Query: 227 EKAVEAAPTAESCV-NLGLEFFSKGRV----KDALEQFDKALELNPNPTEAQAAFYNKAC 391 +K +A + C+ NLGL + +G + K A+ A+ ++ N + AFYN+A Sbjct: 91 DKGPDATAISADCLYNLGLCYMEEGNLQMTYKLAITDLTTAISMDKN---SYTAFYNRAL 147 Query: 392 CHAYREESKKAADCLRIALRDYNL 463 C+ E L++AL DY + Sbjct: 148 CYTKIRE-------LQMALTDYGI 164 Score = 30.4 bits (67), Expect = 5.2 Identities = 18/73 (24%), Positives = 37/73 (50%) Frame = +2 Query: 233 AVEAAPTAESCVNLGLEFFSKGRVKDALEQFDKALELNPNPTEAQAAFYNKACCHAYREE 412 A++ + TAE N G+ G ++A++ + A+ LNP + A++N + + + Sbjct: 341 AMKISTTAEFLTNRGVIHEFMGHKQNAMKDYQDAITLNP---KYSLAYFNAGNIYFHHRQ 397 Query: 413 SKKAADCLRIALR 451 +A+D AL+ Sbjct: 398 FSQASDYFSKALK 410
>OGT1_HUMAN (O15294) UDP-N-acetylglucosamine--peptide| N-acetylglucosaminyltransferase 110 kDa subunit (EC 2.4.1.-) (O-GlcNAc transferase p110 subunit) Length = 1046 Score = 32.3 bits (72), Expect = 1.4 Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 1/46 (2%) Frame = +2 Query: 230 KAVEAAPT-AESCVNLGLEFFSKGRVKDALEQFDKALELNPNPTEA 364 KA+E P A + NLG F ++G + A+ F+KA+ L+PN +A Sbjct: 182 KAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDA 227
>OGT1_RAT (P56558) UDP-N-acetylglucosamine--peptide| N-acetylglucosaminyltransferase 110 kDa subunit (EC 2.4.1.-) (O-GlcNAc transferase p110 subunit) Length = 1036 Score = 32.3 bits (72), Expect = 1.4 Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 1/46 (2%) Frame = +2 Query: 230 KAVEAAPT-AESCVNLGLEFFSKGRVKDALEQFDKALELNPNPTEA 364 KA+E P A + NLG F ++G + A+ F+KA+ L+PN +A Sbjct: 172 KAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDA 217
>YCF3_GRATL (Q6B8S3) Photosystem I assembly protein ycf3| Length = 170 Score = 32.0 bits (71), Expect = 1.8 Identities = 22/54 (40%), Positives = 30/54 (55%) Frame = +2 Query: 269 NLGLEFFSKGRVKDALEQFDKALELNPNPTEAQAAFYNKACCHAYREESKKAAD 430 N+GL + S G ALE + ++LELNP + AF N A + Y + KAAD Sbjct: 77 NIGLIYASNGEHIKALEYYHQSLELNPRLPQ---AFNNIAIIYHY--QGLKAAD 125
>YCF3_PORPU (P51258) Photosystem I assembly protein ycf3| Length = 173 Score = 31.6 bits (70), Expect = 2.4 Identities = 21/71 (29%), Positives = 33/71 (46%) Frame = +2 Query: 275 GLEFFSKGRVKDALEQFDKALELNPNPTEAQAAFYNKACCHAYREESKKAADCLRIALRD 454 G+ S+G +ALE + +AL+L +P + YN +A E KA + L + Sbjct: 42 GMSAQSEGEYAEALENYYEALKLEEDPYDRSYILYNIGLIYASNGEYIKALEYYHQGL-E 100 Query: 455 YNLKFGTVLND 487 N K LN+ Sbjct: 101 LNFKLPQALNN 111
>SPAG1_MOUSE (Q80ZX8) Sperm-associated antigen 1 (Infertility-related sperm| protein Spag-1) (TPR-containing protein involved in spermatogenesis) (TPIS) Length = 901 Score = 31.6 bits (70), Expect = 2.4 Identities = 22/74 (29%), Positives = 37/74 (50%) Frame = +2 Query: 230 KAVEAAPTAESCVNLGLEFFSKGRVKDALEQFDKALELNPNPTEAQAAFYNKACCHAYRE 409 +++ A PTA + N R ALE +KALEL+P + A +A + ++ Sbjct: 238 RSLSALPTAIAYNNRAQAEIKLQRWSSALEDCEKALELDPGNVK---ALLRRATTYKHQN 294 Query: 410 ESKKAADCLRIALR 451 + ++A D LR L+ Sbjct: 295 KLQEAVDDLRKVLQ 308
>TTC8_HUMAN (Q8TAM2) Tetratricopeptide repeat protein 8 (TPR repeat protein 8)| (Bardet-Biedl syndrome 8 protein) Length = 531 Score = 31.6 bits (70), Expect = 2.4 Identities = 21/64 (32%), Positives = 29/64 (45%) Frame = +2 Query: 269 NLGLEFFSKGRVKDALEQFDKALELNPNPTEAQAAFYNKACCHAYREESKKAADCLRIAL 448 NLGL F + L F++AL L N EA +YN ++ A C R+AL Sbjct: 381 NLGLCCFYAQQYDMTLTSFERALSLAENEEEAADVWYNLGHVAVGIGDTNLAHQCFRLAL 440 Query: 449 RDYN 460 + N Sbjct: 441 VNNN 444
>SPY_EUSGR (Q8LP10) Probable UDP-N-acetylglucosamine--peptide| N-acetylglucosaminyltransferase SPINDLY (EC 2.4.1.-) (EgSPY) Length = 918 Score = 30.8 bits (68), Expect = 4.0 Identities = 13/33 (39%), Positives = 21/33 (63%) Frame = +2 Query: 254 AESCVNLGLEFFSKGRVKDALEQFDKALELNPN 352 AE+C NLG+ + + + A+E + KAL + PN Sbjct: 306 AEACNNLGVIYKDRDNLDKAVECYQKALSIKPN 338
>HCPA_HELPY (O25001) Beta-lactamase hcpA precursor (EC 3.5.2.6) (Cysteine-rich| 28 kDa protein) Length = 250 Score = 30.8 bits (68), Expect = 4.0 Identities = 26/86 (30%), Positives = 36/86 (41%) Frame = +2 Query: 230 KAVEAAPTAESCVNLGLEFFSKGRVKDALEQFDKALELNPNPTEAQAAFYNKACCHAYRE 409 + + A P A+ VNLG+E K A F+KA EL + A+ E Sbjct: 21 RGLMAEPDAKELVNLGIESAKKQDFAQAKTHFEKACELKNG--------FGCVFLGAFYE 72 Query: 410 ESKKAADCLRIALRDYNLKFGTVLND 487 E K L+ A++ Y G LND Sbjct: 73 EGKGVGKDLKKAIQFYTK--GCELND 96
>TTC8_MOUSE (Q8VD72) Tetratricopeptide repeat protein 8 (TPR repeat protein 8)| (Bardet-Biedl syndrome 8 protein homolog) Length = 515 Score = 30.8 bits (68), Expect = 4.0 Identities = 20/60 (33%), Positives = 27/60 (45%) Frame = +2 Query: 269 NLGLEFFSKGRVKDALEQFDKALELNPNPTEAQAAFYNKACCHAYREESKKAADCLRIAL 448 NLGL F + L F++AL L N EA +YN ++ A C R+AL Sbjct: 365 NLGLCCFYAQQYDMTLTSFERALSLAENEEEAADVWYNLGHIAVGIGDTNLAHQCFRLAL 424
>Y1345_METJA (Q58741) Hypothetical protein MJ1345| Length = 314 Score = 30.4 bits (67), Expect = 5.2 Identities = 18/54 (33%), Positives = 28/54 (51%) Frame = +2 Query: 296 GRVKDALEQFDKALELNPNPTEAQAAFYNKACCHAYREESKKAADCLRIALRDY 457 G+ +A++ FDK LE+NPN + A+ KA + +A +C AL Y Sbjct: 263 GKYNEAIKYFDKVLEINPNIPD---AWNGKAIALEKLGKINEAIECYNRALDIY 313
>YCF3_ANASP (Q8YS98) Photosystem I assembly protein ycf3| Length = 173 Score = 30.4 bits (67), Expect = 5.2 Identities = 19/51 (37%), Positives = 27/51 (52%) Frame = +2 Query: 269 NLGLEFFSKGRVKDALEQFDKALELNPNPTEAQAAFYNKACCHAYREESKK 421 N+GL + S G ALE + +A+ELNP + A N A + Y+ E K Sbjct: 77 NMGLIYASNGDHDKALELYHQAIELNPRLPQ---ALNNIAVIYHYQGEKAK 124
>SPAG1_RAT (Q5U2X2) Sperm-associated antigen 1 (Infertility-related sperm| protein Spag-1) (HSD-3.8) Length = 893 Score = 30.4 bits (67), Expect = 5.2 Identities = 22/74 (29%), Positives = 35/74 (47%) Frame = +2 Query: 230 KAVEAAPTAESCVNLGLEFFSKGRVKDALEQFDKALELNPNPTEAQAAFYNKACCHAYRE 409 +++ A PTA + N R ALE +KALEL P + A +A + ++ Sbjct: 238 RSLSALPTATAYNNRAQAEIKLQRWSSALEDCEKALELEPGNIK---ALLRRATTYKHQN 294 Query: 410 ESKKAADCLRIALR 451 + +A D LR L+ Sbjct: 295 KFLEAVDDLRKVLQ 308
>STIP1_HUMAN (P31948) Stress-induced-phosphoprotein 1 (STI1)| (Hsc70/Hsp90-organizing protein) (Hop) (Transformation-sensitive protein IEF SSP 3521) (NY-REN-11 antigen) Length = 543 Score = 30.4 bits (67), Expect = 5.2 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 4/66 (6%) Frame = +2 Query: 272 LGLEFFSKGRVKDALEQFDKALELNPNP----TEAQAAFYNKACCHAYREESKKAADCLR 439 LG + + K AL+ +DKA EL+P T A ++ K + RE +KA + R Sbjct: 231 LGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGR 290 Query: 440 IALRDY 457 DY Sbjct: 291 ENREDY 296
>YPIA_BACSU (P54389) Hypothetical protein ypiA| Length = 423 Score = 30.0 bits (66), Expect = 6.9 Identities = 32/108 (29%), Positives = 43/108 (39%), Gaps = 1/108 (0%) Frame = +2 Query: 227 EKAVEAAPTAESCVNLGLEFFSKGRVKDALEQFDKALELNPNPTEAQAAFYNKACCHAYR 406 EKAV+ P + G G VK A++Q EL+P+ T Sbjct: 195 EKAVDENPDPNTIFGYGFTALQAGLVKTAIKQLSDLKELDPSYTSLYMPLSKSYEAEGMY 254 Query: 407 EESKKAADCLRIALRDYNLKFGTVLNDPDMA-PFRASPEFKELQEEAL 547 EE+ K A I +YN + L MA S E K+L +EAL Sbjct: 255 EEALKTAK-EGIRYDEYNKEL--FLYAAKMALKIGKSEEGKKLLQEAL 299
>IFT88_HUMAN (Q13099) Intraflagellar transport 88 homolog (Tetratricopeptide| repeat protein 10) (TPR repeat protein 10) (Recessive polycystic kidney disease protein Tg737 homolog) Length = 824 Score = 30.0 bits (66), Expect = 6.9 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 3/55 (5%) Frame = +2 Query: 269 NLGLEFFSKGRVKDALEQFDKALELNPNPTEAQAAFYNKACCH---AYREESKKA 424 N+G+ F G+ DA+ ++ + + PN A YN C+ RE+ KKA Sbjct: 277 NIGVTFIQAGQYSDAINSYEHIMSMAPN----LKAGYNLTICYFAIGDREKMKKA 327
>YCF3_ODOSI (P49525) Photosystem I assembly protein ycf3| Length = 179 Score = 30.0 bits (66), Expect = 6.9 Identities = 14/32 (43%), Positives = 20/32 (62%) Frame = +2 Query: 269 NLGLEFFSKGRVKDALEQFDKALELNPNPTEA 364 N+GL + + G ALE + +ALELN N +A Sbjct: 71 NIGLIYGNNGNYSQALEYYHQALELNSNLPQA 102
>Y940_METJA (Q58350) Hypothetical protein MJ0940| Length = 318 Score = 30.0 bits (66), Expect = 6.9 Identities = 18/52 (34%), Positives = 29/52 (55%) Frame = +2 Query: 281 EFFSKGRVKDALEQFDKALELNPNPTEAQAAFYNKACCHAYREESKKAADCL 436 E+ +G + ++L DKALELNP + + A + KA A + K+ +CL Sbjct: 26 EYRDRGNLLESLYYLDKALELNP---DFKFAKFLKAISLAILGDINKSIECL 74
>ZFP59_MOUSE (P16373) Zinc finger protein 59 (Zfp-59) (Zinc finger protein| Mfg-2) Length = 634 Score = 30.0 bits (66), Expect = 6.9 Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 1/62 (1%) Frame = +3 Query: 366 KQRS-ITRHAAMHTGKKAKKLQIA*E*LCEITISNLAQYLMIQTWRHSGHHQNLRNFKRR 542 +QRS +T H ++HTGKK + CE +LA L+I H H R F+ + Sbjct: 420 RQRSKLTEHESIHTGKKPFQ--------CEACGKSLANTLLI---HHQKSHSGERPFECK 468 Query: 543 HC 548 C Sbjct: 469 EC 470
>YCF3_PSINU (Q8WI17) Photosystem I assembly protein ycf3| Length = 171 Score = 29.6 bits (65), Expect = 9.0 Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Frame = +2 Query: 269 NLGLEFFSKGRVKDALEQFDKALELNPNPTEAQAAFYNKA-CCHAYREESKKAAD 430 N+GL S G ALE + +ALE NP+ + AF N A CH E++ + D Sbjct: 77 NIGLIHTSNGEHAKALEYYFQALERNPSLPQ---AFNNMAVICHYRGEQAIQQGD 128
>YCF3_PHYPA (Q6YXP2) Photosystem I assembly protein ycf3| Length = 168 Score = 29.6 bits (65), Expect = 9.0 Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Frame = +2 Query: 269 NLGLEFFSKGRVKDALEQFDKALELNPNPTEAQAAFYNKA-CCHAYREESKKAAD 430 N+GL S G ALE + +ALE NP+ + AF N A CH E++ + D Sbjct: 77 NIGLIHTSNGEHAKALEYYFQALERNPSLPQ---AFNNMAVICHYRGEQAIQQGD 128
>HCPA_HELPJ (Q9ZMM1) Beta-lactamase hcpA precursor (EC 3.5.2.6) (Cysteine-rich| 28 kDa protein) Length = 250 Score = 29.6 bits (65), Expect = 9.0 Identities = 25/86 (29%), Positives = 36/86 (41%) Frame = +2 Query: 230 KAVEAAPTAESCVNLGLEFFSKGRVKDALEQFDKALELNPNPTEAQAAFYNKACCHAYRE 409 + + A P A+ V+LG+E K A F+KA EL + A+ E Sbjct: 21 RGLMAEPDAKELVSLGIESVKKQDFAQAKAHFEKACELKEG--------FGCVFLGAFYE 72 Query: 410 ESKKAADCLRIALRDYNLKFGTVLND 487 E K L+ A++ Y G LND Sbjct: 73 EGKGVGKDLKKAIQFYTK--GCELND 96
>YCF3_MARPO (P12202) Photosystem I assembly protein ycf3| Length = 167 Score = 29.6 bits (65), Expect = 9.0 Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Frame = +2 Query: 269 NLGLEFFSKGRVKDALEQFDKALELNPNPTEAQAAFYNKA-CCHAYREESKKAAD 430 N+GL S G ALE + +ALE NP+ + AF N A CH E++ + D Sbjct: 77 NIGLIHTSNGEHAKALEYYFQALERNPSLPQ---AFNNMAVICHYRGEQAIQQGD 128 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 89,883,898 Number of Sequences: 219361 Number of extensions: 1721896 Number of successful extensions: 6789 Number of sequences better than 10.0: 37 Number of HSP's better than 10.0 without gapping: 5908 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6778 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6769072002 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
