ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal37i09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1EGF_PIG (Q00968) Pro-epidermal growth factor precursor (EGF) [Co... 28 4.1
2GBB_NICPL (P93339) Guanine nucleotide-binding protein beta subun... 28 4.1
3YAA3_SCHPO (Q09797) Hypothetical protein C22G7.03 in chromosome I 28 5.4
4STCK_EMENI (Q00706) Putative sterigmatocystin biosynthesis fatty... 28 7.0
5FDFT_YARLI (Q9Y753) Squalene synthetase (EC 2.5.1.21) (SQS) (SS)... 28 7.0
6GLPK2_SULAC (Q4J7A3) Glycerol kinase 2 (EC 2.7.1.30) (ATP:glycer... 28 7.0
7NRDC_RAT (P47245) Nardilysin precursor (EC 3.4.24.61) (N-arginin... 27 9.1
8NRDC_MOUSE (Q8BHG1) Nardilysin precursor (EC 3.4.24.61) (N-argin... 27 9.1
9AMY_BACST (P06279) Alpha-amylase precursor (EC 3.2.1.1) (1,4-alp... 27 9.1
10NRDC_PONPY (Q5R4H6) Nardilysin precursor (EC 3.4.24.61) (N-argin... 27 9.1
11NRDC_HUMAN (O43847) Nardilysin precursor (EC 3.4.24.61) (N-argin... 27 9.1

>EGF_PIG (Q00968) Pro-epidermal growth factor precursor (EGF) [Contains:|
           Epidermal growth factor]
          Length = 1214

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 13/28 (46%), Positives = 13/28 (46%)
 Frame = +2

Query: 113 CRFVQCAFEPSMHVFFCGEGMKASM*GR 196
           CR   C  EP  HV  C EG   S  GR
Sbjct: 325 CRGSMCGQEPKSHVCTCAEGYTLSQDGR 352



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>GBB_NICPL (P93339) Guanine nucleotide-binding protein beta subunit (NpGPB1)|
          Length = 377

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = +2

Query: 77  LLSQRTPEKRIACRFVQ-CAFEPSMHVFFCG 166
           L SQ+T   ++ C +V  CAF PS H   CG
Sbjct: 95  LTSQKTHAIKLPCAWVMTCAFSPSGHSVACG 125



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>YAA3_SCHPO (Q09797) Hypothetical protein C22G7.03 in chromosome I|
          Length = 236

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 12/45 (26%), Positives = 24/45 (53%)
 Frame = -1

Query: 260 LEIYTEVMVNCTMSFTGKMQRIFLTWMPSYLHHKRKHALKVQTRI 126
           + I  ++ +N     T  ++ I+ TW+P++   KRK   K + R+
Sbjct: 164 IPIIEDISINEDTQRTVSLETIYATWIPTFWESKRKSHEKDEGRL 208



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>STCK_EMENI (Q00706) Putative sterigmatocystin biosynthesis fatty acid synthase|
            beta subunit
          Length = 1914

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +2

Query: 44   QGMPVYRAGRDLLSQRTPEKRIACRFVQCAFEPSM 148
            +G PV R     + QR PE+ ++ +  +C  EP M
Sbjct: 1269 EGKPVVRLQTTFIIQRRPEESVSQQQFRCVEEPDM 1303



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>FDFT_YARLI (Q9Y753) Squalene synthetase (EC 2.5.1.21) (SQS) (SS)|
           (Farnesyl-diphosphate farnesyltransferase) (FPP:FPP
           farnesyltransferase)
          Length = 445

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = +1

Query: 31  LLDFTRHARVPGWTRSPQSENPRKAYSLQICPMRV*TFN 147
           L DFT+  + PGW  +    N R    LQ  P+ +  FN
Sbjct: 96  LRDFTKCMKTPGWKFTDSDPNERDRVVLQEFPVVMTEFN 134



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>GLPK2_SULAC (Q4J7A3) Glycerol kinase 2 (EC 2.7.1.30) (ATP:glycerol|
           3-phosphotransferase 2) (Glycerokinase 2) (GK 2)
          Length = 497

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -3

Query: 354 GSIFSYMLWHQPNGTRYTTVNNLCSRLSSMNIRDL 250
           G+I +Y++W   NG  + T  +  SR    NIR L
Sbjct: 162 GTIDTYLIWKLTNGKAHVTDYSNASRTMLFNIRKL 196



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>NRDC_RAT (P47245) Nardilysin precursor (EC 3.4.24.61) (N-arginine dibasic|
           convertase) (NRD convertase) (NRD-C)
          Length = 1161

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -2

Query: 379 FFRTQLDRWVNFFIH 335
           +F+  LDRW  FFIH
Sbjct: 293 YFKEALDRWAQFFIH 307



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>NRDC_MOUSE (Q8BHG1) Nardilysin precursor (EC 3.4.24.61) (N-arginine dibasic|
           convertase) (NRD convertase) (NRD-C)
          Length = 1161

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -2

Query: 379 FFRTQLDRWVNFFIH 335
           +F+  LDRW  FFIH
Sbjct: 293 YFKEALDRWAQFFIH 307



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>AMY_BACST (P06279) Alpha-amylase precursor (EC 3.2.1.1) (1,4-alpha-D-glucan|
           glucanohydrolase)
          Length = 549

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = -3

Query: 354 GSIFSYMLWHQPN-GTRYTTVNNLCSRLSSMNIRDL 250
           G++  Y  W+ P+ GT +T V N  + LSS+ I  L
Sbjct: 40  GTMMQYFEWYLPDDGTLWTKVANEANNLSSLGITAL 75



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>NRDC_PONPY (Q5R4H6) Nardilysin precursor (EC 3.4.24.61) (N-arginine dibasic|
           convertase) (NRD convertase) (NRD-C)
          Length = 1152

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -2

Query: 379 FFRTQLDRWVNFFIH 335
           +F+  LDRW  FFIH
Sbjct: 283 YFKEALDRWAQFFIH 297



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>NRDC_HUMAN (O43847) Nardilysin precursor (EC 3.4.24.61) (N-arginine dibasic|
           convertase) (NRD convertase) (NRD-C)
          Length = 1150

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -2

Query: 379 FFRTQLDRWVNFFIH 335
           +F+  LDRW  FFIH
Sbjct: 281 YFKEALDRWAQFFIH 295


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,290,013
Number of Sequences: 219361
Number of extensions: 1146541
Number of successful extensions: 2438
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2409
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2438
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 1391514312
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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