>Y2427_MYCLE (P54878) Hypothetical protein ML2427|
          Length = 367

 Score = 36.6 bits (83), Expect = 0.067
 Identities = 23/64 (35%), Positives = 33/64 (51%)
 Frame = +3

Query: 6   TRLFPGGAREALHRKGEEYKLFWPEQSEFVRMASRFGATIVPFGVVGEDDICDMLLDYND 185
           T +FP G +    R  + Y+L    +  FV+ A    ATIVP  +VG ++I  ML D   
Sbjct: 225 TAVFPEGYKGLGKRFQDRYRLQRFGRGGFVKAALSTKATIVPCSIVGSEEIYPMLTDVKL 284

Query: 186 LVKL 197
           L +L
Sbjct: 285 LARL 288

>Y514_MYCBO (P64724) Hypothetical protein Mb0514|
          Length = 358

 Score = 35.0 bits (79), Expect = 0.20
 Identities = 22/64 (34%), Positives = 32/64 (50%)
 Frame = +3

Query: 6   TRLFPGGAREALHRKGEEYKLFWPEQSEFVRMASRFGATIVPFGVVGEDDICDMLLDYND 185
           T +FP G +    R  + Y+L    +  FV  A R  A IVP  ++G ++I  ML D   
Sbjct: 216 TAVFPEGYKGLGKRFEDRYRLQRFGRGGFVSAALRTKAPIVPCSIIGSEEIYPMLTDVKL 275

Query: 186 LVKL 197
           L +L
Sbjct: 276 LARL 279

>Y502_MYCTU (P64723) Hypothetical protein Rv0502/MT0523|
          Length = 358

 Score = 35.0 bits (79), Expect = 0.20
 Identities = 22/64 (34%), Positives = 32/64 (50%)
 Frame = +3

Query: 6   TRLFPGGAREALHRKGEEYKLFWPEQSEFVRMASRFGATIVPFGVVGEDDICDMLLDYND 185
           T +FP G +    R  + Y+L    +  FV  A R  A IVP  ++G ++I  ML D   
Sbjct: 216 TAVFPEGYKGLGKRFEDRYRLQRFGRGGFVSAALRTKAPIVPCSIIGSEEIYPMLTDVKL 275

Query: 186 LVKL 197
           L +L
Sbjct: 276 LARL 279

>DGA1_SCHPO (O74850) Diacylglycerol O-acyltransferase 1 (EC 2.3.1.20)|
           (Diglyceride acyltransferase)
          Length = 345

 Score = 35.0 bits (79), Expect = 0.20
 Identities = 22/69 (31%), Positives = 38/69 (55%)
 Frame = +3

Query: 21  GGAREALHRKGEEYKLFWPEQSEFVRMASRFGATIVPFGVVGEDDICDMLLDYNDLVKLP 200
           GGA+E+L  +  +  L   ++  FV++A   G+++VP    GE DI +  +D N   ++ 
Sbjct: 196 GGAQESLLSRPGQNNLVLKKRFGFVKLAFLTGSSLVPCFAFGESDIFEQ-VDNNPRTRIY 254

Query: 201 FYDSIDKKI 227
            +  I KKI
Sbjct: 255 KFQEIVKKI 263

>Y956_LISMF (Q721N0) Hypothetical tRNA/rRNA methyltransferase LMOf2365_0956 (EC|
           2.1.1.-)
          Length = 169

 Score = 33.9 bits (76), Expect = 0.43
 Identities = 33/112 (29%), Positives = 49/112 (43%), Gaps = 7/112 (6%)
 Frame = +3

Query: 123 IVPFGVVGEDDICDML-LDYNDLVKLPFYDSIDK--KINEGG----LIKLRTDSTGEIKN 281
           I P G   +D +     LDY D VKL +YDS+D+  + NEGG    + K       +I  
Sbjct: 33  IRPLGFSTDDKMLKRAGLDYWDNVKLSYYDSLDEFFEKNEGGEFYYITKFGRHVYSDIDY 92

Query: 282 QDMHPVVLTPKVPGRFYFIFGKPIETRGREKELRDKEKAQHLYLHVKSEVES 437
            D +           ++F+FGK  ET G    L  K +   L + +   + S
Sbjct: 93  SDPNK---------DYFFVFGK--ETTGLPDALLQKNEENCLRIPMTDHIRS 133

>Y346_MYCGE (P47588) Hypothetical tRNA/rRNA methyltransferase MG346 (EC|
           2.1.1.-)
          Length = 166

 Score = 33.5 bits (75), Expect = 0.57
 Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 10/75 (13%)
 Frame = +3

Query: 276 KNQDMHP--VVLTPKVPGRFYFIFGKPIETRGREKELRDKEKAQHLYLHVKSEVES---- 437
           K+ D  P  + +T K+P   YF+FG+  ET+G  K + D  K   + + + + V S    
Sbjct: 85  KSGDKTPDQICMTNKLPNELYFVFGQ--ETKGLPKTIMDNFKQNQIRIPIWNSVRSINLA 142

Query: 438 ----CIKYLKEKREE 470
               CI Y   K+ +
Sbjct: 143 NAVVCILYEYSKQNQ 157

>RECA_FRATT (Q5NE98) Protein recA (Recombinase A)|
          Length = 359

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 11/114 (9%)
 Frame = +3

Query: 195 LPFYDSIDKKINEGGLIKLRTDSTG-EIKNQDMHPVVLTPKVPGRFYFIFGKPIETRGRE 371
           L FY S+  ++ +GG IK   D +G EIK + +   V  P     F  I+G+ I      
Sbjct: 213 LKFYSSVRLEVKKGGSIKDGIDVSGNEIKVKVVKNKVAPPFKQADFELIYGEGISLEAEL 272

Query: 372 KELRDK----EKAQHLYLHVKSEV----ESCIKYLKEKREE--DPYRSILPRLL 503
            +L  K    EK+   Y +   ++    E   +YLKE   E  +  R+IL  LL
Sbjct: 273 IDLGAKYNIIEKSGAWYSYKGKKIGQGKEKSKEYLKENTAERDEIERAILELLL 326

>Y934_LISIN (P69001) Hypothetical tRNA/rRNA methyltransferase lin0934 (EC|
           2.1.1.-)
          Length = 169

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 7/112 (6%)
 Frame = +3

Query: 123 IVPFGVVGEDDICDML-LDYNDLVKLPFYDSIDK--KINEGG----LIKLRTDSTGEIKN 281
           I P G   +D +     LDY D VKL +YDS+D+  + N GG    + K       ++  
Sbjct: 33  IRPLGFSTDDKMLKRAGLDYWDNVKLSYYDSLDEFFEKNAGGEFYYITKFGRHVYSDVDY 92

Query: 282 QDMHPVVLTPKVPGRFYFIFGKPIETRGREKELRDKEKAQHLYLHVKSEVES 437
            D +           ++F+FGK  ET G   EL    +   L + +   + S
Sbjct: 93  SDPNK---------NYFFVFGK--ETTGLPDELLQANEENCLRIPMTDHIRS 133

>Y033_THETN (Q8R6I7) Hypothetical UPF0236 protein|
           TTE0033/TTE0744/TTE0838/TTE0852/TTE1082/
           TTE1247/TTE1519/TTE1678/TTE1739/TTE1823/TTE2212
          Length = 467

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 10/65 (15%)
 Frame = +3

Query: 369 EKELRDKEKAQHLYL-----HV-----KSEVESCIKYLKEKREEDPYRSILPRLLYKATH 518
           ++E+++K++ + LY+     HV      SE    I Y+ E REE   R++L  + YKA  
Sbjct: 170 KREIKEKKEVRVLYIEADEDHVPLQDGSSETPRLI-YIHEGREEKNGRNVLKNVYYKAYV 228

Query: 519 GSDAE 533
           G  AE
Sbjct: 229 GEKAE 233

>SLU7_YEAST (Q02775) Pre-mRNA-splicing factor SLU7 (Synthetic lethal with U5|
           snRNA protein 7) (Synthetic lethal with U2 snRNA protein
           17)
          Length = 382

 Score = 29.6 bits (65), Expect = 8.2
 Identities = 15/37 (40%), Positives = 23/37 (62%)
 Frame = +3

Query: 363 GREKELRDKEKAQHLYLHVKSEVESCIKYLKEKREED 473
           G   E+ DKEK QH+ +   ++ E    YLK+KRE++
Sbjct: 314 GIRDEIEDKEKVQHVLVANPTKYE----YLKKKREQE 346


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,677,828
Number of Sequences: 219361
Number of extensions: 1747587
Number of successful extensions: 5003
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4998
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6200242422
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)