>NPAS1_HUMAN (Q99742) Neuronal PAS domain protein 1 (Neuronal PAS1) (Member of|
           PAS protein 5) (MOP5)
          Length = 590

 Score = 31.6 bits (70), Expect = 2.6
 Identities = 21/63 (33%), Positives = 27/63 (42%)
 Frame = +1

Query: 259 WTQALQPAQGQGHRAALPGDHRVLQDHRR*PQAEAGLDPPRQEERREARIPCLTSQSPLP 438
           W Q++    G G     PG+H VL       QAE G   P    +  A + C  + SP P
Sbjct: 379 WLQSVATVAGSGKS---PGEHHVLWVSHVLSQAEGG-QTPLDAFQLPASVACEEASSPGP 434

Query: 439 SPT 447
            PT
Sbjct: 435 EPT 437

>TSC1_RAT (Q9Z136) Hamartin (Tuberous sclerosis 1 protein homolog)|
          Length = 1163

 Score = 30.4 bits (67), Expect = 5.9
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +1

Query: 349 PQAEAGLDPPRQEERREARIPCLTSQSPLPS 441
           P ++A   PPR+EER ++  P L  Q  +PS
Sbjct: 410 PASQASATPPRKEERADSSRPYLPRQQDVPS 440


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,720,242
Number of Sequences: 219361
Number of extensions: 1613724
Number of successful extensions: 4660
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4508
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4657
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7592921998
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)