ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal37h22
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_507345.1| PREDICTED Oryza sativa (japonica cultivar-group... 367 3e-98
2ref|XM_483846.1| Oryza sativa (japonica cultivar-group), mRNA 367 3e-98
3dbj|AK066210.1| Oryza sativa (japonica cultivar-group) cDNA clon... 367 3e-98
4dbj|AK061598.1| Oryza sativa (japonica cultivar-group) cDNA clon... 359 8e-96
5dbj|AB218881.1| Zea mays mRNA for PGR5, complete cds 226 8e-56
6dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 210 5e-51
7dbj|AP005411.3| Oryza sativa (japonica cultivar-group) genomic D... 210 5e-51
8gb|AY389579.1| Hyacinthus orientalis unknown mRNA 60 1e-05
9dbj|AB218880.1| Portulaca oleracea mRNA for PGR5, complete cds 56 2e-04
10gb|AF110789.1|AF110789 Volvox carteri f. nagariensis clone G32 u... 52 0.003
11dbj|AB218882.1| Portulaca grandiflora mRNA for PGR5, complete cds 48 0.041
12emb|BX935607.2| Gallus gallus finished cDNA, clone ChEST166e9 46 0.16
13gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 44 0.64
14gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 44 0.64
15gb|AC126012.22| Medicago truncatula clone mth2-27p4, complete se... 44 0.64
16gb|AC141110.7| Medicago truncatula clone mth2-17i10, complete se... 44 0.64
17emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 44 0.64
18emb|AL939107.1|SCO939107 Streptomyces coelicolor A3(2) complete ... 44 0.64
19emb|AL672236.18| Mouse DNA sequence from clone RP23-206L21 on ch... 44 0.64
20gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 44 0.64
21dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 44 0.64
22emb|Z35330.1|BJRIBRNA B.japonicum (110) genes for 16S, 23S, 5S r... 44 0.64
23gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 44 0.64
24emb|AJ937765.1| Uncultured candidate division OP8 bacterium fosm... 44 0.64
25gb|AC166102.2| Mus musculus BAC clone RP23-397O23 from chromosom... 42 2.5
26emb|CR855305.12| Zebrafish DNA sequence from clone DKEY-98F17 in... 42 2.5
27emb|AL117382.28|HSJ881L22 Human DNA sequence from clone RP5-881L... 42 2.5
28gb|CP000249.1| Frankia sp. CcI3, complete genome 42 2.5
29dbj|AB168805.1| Macaca fascicularis testis cDNA, clone: QtsA-14950 42 2.5
30dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 42 2.5
31emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome 42 2.5 
>ref|XM_507345.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0044E16.27
           mRNA
          Length = 886

 Score =  367 bits (185), Expect = 3e-98
 Identities = 245/265 (92%)
 Strand = Plus / Plus

                                                                       
Query: 150 cggcgcggccgcggtcggcgcggccccttcggacgcccgccaggatgggcaatgtaaacg 209
           |||||||||| |||||||||||||| || ||| |||| || ||||||||||| || ||||
Sbjct: 226 cggcgcggcctcggtcggcgcggccactgcgggcgccggcgaggatgggcaacgtgaacg 285

                                                                       
Query: 210 agggcaagggcatcttcgcgcccttggtggtggtggtgcgcaacatcgttggacgcaagc 269
           |||||||||| |||||||| ||  |||||||||||||||||||||||||||| |||||||
Sbjct: 286 agggcaaggggatcttcgcaccggtggtggtggtggtgcgcaacatcgttggccgcaagc 345

                                                                       
Query: 270 gcttcaaccagctcaggggcaaggccatcgcgctgcactcccaggtgatcaccgagttct 329
           ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct: 346 gcttcaaccagctcaggggaaaggccatcgcgctgcactcgcaggtgatcaccgagttct 405

                                                                       
Query: 330 gcaagaccatcggcgctgaccccaagcagaggcagggcttgatccgcctcgccaagaaga 389
           |||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||
Sbjct: 406 gcaagaccatcggcgccgacgccaagcagaggcagggcttgatccgccttgccaagaaga 465

                                    
Query: 390 acggagagaagctcggattccttgc 414
           |||| ||||||||||| ||||||||
Sbjct: 466 acggcgagaagctcggtttccttgc 490
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>ref|XM_483846.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 760

 Score =  367 bits (185), Expect = 3e-98
 Identities = 245/265 (92%)
 Strand = Plus / Plus

                                                                       
Query: 150 cggcgcggccgcggtcggcgcggccccttcggacgcccgccaggatgggcaatgtaaacg 209
           |||||||||| |||||||||||||| || ||| |||| || ||||||||||| || ||||
Sbjct: 238 cggcgcggcctcggtcggcgcggccactgcgggcgccggcgaggatgggcaacgtgaacg 297

                                                                       
Query: 210 agggcaagggcatcttcgcgcccttggtggtggtggtgcgcaacatcgttggacgcaagc 269
           |||||||||| |||||||| ||  |||||||||||||||||||||||||||| |||||||
Sbjct: 298 agggcaaggggatcttcgcaccggtggtggtggtggtgcgcaacatcgttggccgcaagc 357

                                                                       
Query: 270 gcttcaaccagctcaggggcaaggccatcgcgctgcactcccaggtgatcaccgagttct 329
           ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct: 358 gcttcaaccagctcaggggaaaggccatcgcgctgcactcgcaggtgatcaccgagttct 417

                                                                       
Query: 330 gcaagaccatcggcgctgaccccaagcagaggcagggcttgatccgcctcgccaagaaga 389
           |||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||
Sbjct: 418 gcaagaccatcggcgccgacgccaagcagaggcagggcttgatccgccttgccaagaaga 477

                                    
Query: 390 acggagagaagctcggattccttgc 414
           |||| ||||||||||| ||||||||
Sbjct: 478 acggcgagaagctcggtttccttgc 502
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>dbj|AK066210.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013056J23, full
           insert sequence
          Length = 886

 Score =  367 bits (185), Expect = 3e-98
 Identities = 245/265 (92%)
 Strand = Plus / Plus

                                                                       
Query: 150 cggcgcggccgcggtcggcgcggccccttcggacgcccgccaggatgggcaatgtaaacg 209
           |||||||||| |||||||||||||| || ||| |||| || ||||||||||| || ||||
Sbjct: 226 cggcgcggcctcggtcggcgcggccactgcgggcgccggcgaggatgggcaacgtgaacg 285

                                                                       
Query: 210 agggcaagggcatcttcgcgcccttggtggtggtggtgcgcaacatcgttggacgcaagc 269
           |||||||||| |||||||| ||  |||||||||||||||||||||||||||| |||||||
Sbjct: 286 agggcaaggggatcttcgcaccggtggtggtggtggtgcgcaacatcgttggccgcaagc 345

                                                                       
Query: 270 gcttcaaccagctcaggggcaaggccatcgcgctgcactcccaggtgatcaccgagttct 329
           ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct: 346 gcttcaaccagctcaggggaaaggccatcgcgctgcactcgcaggtgatcaccgagttct 405

                                                                       
Query: 330 gcaagaccatcggcgctgaccccaagcagaggcagggcttgatccgcctcgccaagaaga 389
           |||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||
Sbjct: 406 gcaagaccatcggcgccgacgccaagcagaggcagggcttgatccgccttgccaagaaga 465

                                    
Query: 390 acggagagaagctcggattccttgc 414
           |||| ||||||||||| ||||||||
Sbjct: 466 acggcgagaagctcggtttccttgc 490
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>dbj|AK061598.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-A06, full
           insert sequence
          Length = 760

 Score =  359 bits (181), Expect = 8e-96
 Identities = 244/265 (92%)
 Strand = Plus / Plus

                                                                       
Query: 150 cggcgcggccgcggtcggcgcggccccttcggacgcccgccaggatgggcaatgtaaacg 209
           |||||||||| |||||||||||||| || ||| |||| || ||||||||||| ||  |||
Sbjct: 238 cggcgcggcctcggtcggcgcggccactgcgggcgccggcgaggatgggcaacgtggacg 297

                                                                       
Query: 210 agggcaagggcatcttcgcgcccttggtggtggtggtgcgcaacatcgttggacgcaagc 269
           |||||||||| |||||||| ||  |||||||||||||||||||||||||||| |||||||
Sbjct: 298 agggcaaggggatcttcgcaccggtggtggtggtggtgcgcaacatcgttggccgcaagc 357

                                                                       
Query: 270 gcttcaaccagctcaggggcaaggccatcgcgctgcactcccaggtgatcaccgagttct 329
           ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct: 358 gcttcaaccagctcaggggaaaggccatcgcgctgcactcgcaggtgatcaccgagttct 417

                                                                       
Query: 330 gcaagaccatcggcgctgaccccaagcagaggcagggcttgatccgcctcgccaagaaga 389
           |||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||
Sbjct: 418 gcaagaccatcggcgccgacgccaagcagaggcagggcttgatccgccttgccaagaaga 477

                                    
Query: 390 acggagagaagctcggattccttgc 414
           |||| ||||||||||| ||||||||
Sbjct: 478 acggcgagaagctcggtttccttgc 502
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>dbj|AB218881.1| Zea mays mRNA for PGR5, complete cds
          Length = 596

 Score =  226 bits (114), Expect = 8e-56
 Identities = 195/222 (87%)
 Strand = Plus / Plus

                                                                       
Query: 193 gatgggcaatgtaaacgagggcaagggcatcttcgcgcccttggtggtggtggtgcgcaa 252
           ||||||||| || ||||| ||||||||  | ||||| ||  | || ||||||| ||||||
Sbjct: 250 gatgggcaacgtgaacgatggcaaggggctgttcgcaccgctcgtcgtggtggcgcgcaa 309

                                                                       
Query: 253 catcgttggacgcaagcgcttcaaccagctcaggggcaaggccatcgcgctgcactccca 312
           |||| |||| ||||| |||||||||||||| ||||| || || |||||||||||||| ||
Sbjct: 310 catcattggccgcaaacgcttcaaccagctgagggggaaagcaatcgcgctgcactcgca 369

                                                                       
Query: 313 ggtgatcaccgagttctgcaagaccatcggcgctgaccccaagcagaggcagggcttgat 372
           ||| |||| |||||||||||||||||||||||| ||| |||||||| |||||||| | ||
Sbjct: 370 ggtcatcaacgagttctgcaagaccatcggcgccgactccaagcagcggcagggcctcat 429

                                                     
Query: 373 ccgcctcgccaagaagaacggagagaagctcggattccttgc 414
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 ccgcctcgccaagaagaacggagagaagctcggattccttgc 471



 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                          
Query: 78  tgcgagctcttccgacgtggtctagctctgtgtccggtgacgaccac 124
           |||||||||| ||||||||||| ||||| || ||||| |||||||||
Sbjct: 120 tgcgagctctcccgacgtggtccagctcggtttccggcgacgaccac 166
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  210 bits (106), Expect = 5e-51
 Identities = 151/166 (90%)
 Strand = Plus / Plus

                                                                            
Query: 150      cggcgcggccgcggtcggcgcggccccttcggacgcccgccaggatgggcaatgtaaacg 209
                |||||||||| |||||||||||||| || ||| |||| || ||||||||||| || ||||
Sbjct: 28370829 cggcgcggcctcggtcggcgcggccactgcgggcgccggcgaggatgggcaacgtgaacg 28370888

                                                                            
Query: 210      agggcaagggcatcttcgcgcccttggtggtggtggtgcgcaacatcgttggacgcaagc 269
                |||||||||| |||||||| ||  |||||||||||||||||||||||||||| |||||||
Sbjct: 28370889 agggcaaggggatcttcgcaccggtggtggtggtggtgcgcaacatcgttggccgcaagc 28370948

                                                              
Query: 270      gcttcaaccagctcaggggcaaggccatcgcgctgcactcccaggt 315
                ||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 28370949 gcttcaaccagctcaggggaaaggccatcgcgctgcactcgcaggt 28370994



 Score =  167 bits (84), Expect = 6e-38
 Identities = 99/104 (95%)
 Strand = Plus / Plus

                                                                            
Query: 311      caggtgatcaccgagttctgcaagaccatcggcgctgaccccaagcagaggcagggcttg 370
                ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 28371180 caggtgatcaccgagttctgcaagaccatcggcgccgacgccaagcagaggcagggcttg 28371239

                                                            
Query: 371      atccgcctcgccaagaagaacggagagaagctcggattccttgc 414
                |||||||| |||||||||||||| ||||||||||| ||||||||
Sbjct: 28371240 atccgccttgccaagaagaacggcgagaagctcggtttccttgc 28371283
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>dbj|AP005411.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0044E16
          Length = 153296

 Score =  210 bits (106), Expect = 5e-51
 Identities = 151/166 (90%)
 Strand = Plus / Plus

                                                                         
Query: 150   cggcgcggccgcggtcggcgcggccccttcggacgcccgccaggatgggcaatgtaaacg 209
             |||||||||| |||||||||||||| || ||| |||| || ||||||||||| || ||||
Sbjct: 99635 cggcgcggcctcggtcggcgcggccactgcgggcgccggcgaggatgggcaacgtgaacg 99694

                                                                         
Query: 210   agggcaagggcatcttcgcgcccttggtggtggtggtgcgcaacatcgttggacgcaagc 269
             |||||||||| |||||||| ||  |||||||||||||||||||||||||||| |||||||
Sbjct: 99695 agggcaaggggatcttcgcaccggtggtggtggtggtgcgcaacatcgttggccgcaagc 99754

                                                           
Query: 270   gcttcaaccagctcaggggcaaggccatcgcgctgcactcccaggt 315
             ||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 99755 gcttcaaccagctcaggggaaaggccatcgcgctgcactcgcaggt 99800



 Score =  167 bits (84), Expect = 6e-38
 Identities = 99/104 (95%)
 Strand = Plus / Plus

                                                                          
Query: 311    caggtgatcaccgagttctgcaagaccatcggcgctgaccccaagcagaggcagggcttg 370
              ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 99986  caggtgatcaccgagttctgcaagaccatcggcgccgacgccaagcagaggcagggcttg 100045

                                                          
Query: 371    atccgcctcgccaagaagaacggagagaagctcggattccttgc 414
              |||||||| |||||||||||||| ||||||||||| ||||||||
Sbjct: 100046 atccgccttgccaagaagaacggcgagaagctcggtttccttgc 100089
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>gb|AY389579.1| Hyacinthus orientalis unknown mRNA
          Length = 356

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 108/134 (80%)
 Strand = Plus / Plus

                                                                       
Query: 272 ttcaaccagctcaggggcaaggccatcgcgctgcactcccaggtgatcaccgagttctgc 331
           |||||||||||||| || |||||||| || || ||||| ||||| |||| ||||||||||
Sbjct: 96  ttcaaccagctcagaggaaaggccatagccctccactctcaggtaatcaacgagttctgc 155

                                                                       
Query: 332 aagaccatcggcgctgaccccaagcagaggcagggcttgatccgcctcgccaagaagaac 391
           ||  | || || || ||    ||||||||||| ||  |||||||  | || |||||||||
Sbjct: 156 aaatcgataggagcagatgggaagcagaggcaaggactgatccggttggcgaagaagaac 215

                         
Query: 392 ggagagaagctcgg 405
           ||||||| ||||||
Sbjct: 216 ggagagatgctcgg 229
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>dbj|AB218880.1| Portulaca oleracea mRNA for PGR5, complete cds
          Length = 636

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                       
Query: 293 gccatcgcgctgcactcccaggtgatcaccgagttctgcaagac 336
           |||||||| || ||||| ||||||||||| ||||||||||||||
Sbjct: 375 gccatcgctcttcactcacaggtgatcacggagttctgcaagac 418



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 383 aagaagaacggagagaagctcggattcct 411
           ||||||||||| |||||||| ||||||||
Sbjct: 465 aagaagaacggggagaagctgggattcct 493
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>gb|AF110789.1|AF110789 Volvox carteri f. nagariensis clone G32 unknown mRNA
          Length = 1286

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 362 cagggcttgatccgcctcgccaagaagaacggagagaagctcggattcct 411
           |||||| |||| ||||||||||||||||| || |||||||| || |||||
Sbjct: 496 cagggcgtgattcgcctcgccaagaagaatggcgagaagctgggcttcct 545
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>dbj|AB218882.1| Portulaca grandiflora mRNA for PGR5, complete cds
          Length = 660

 Score = 48.1 bits (24), Expect = 0.041
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 293 gccatcgcgctgcactcccaggtgatcaccgagttctgcaagac 336
           |||||||| || ||||| ||||| ||||| ||||||||||||||
Sbjct: 356 gccatcgctcttcactcacaggtcatcacggagttctgcaagac 399
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>emb|BX935607.2| Gallus gallus finished cDNA, clone ChEST166e9
          Length = 878

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 352 caagcagaggcagggcttgatcc 374
           |||||||||||||||||||||||
Sbjct: 358 caagcagaggcagggcttgatcc 336
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 152     gcgcggccgcggtcggcgcggc 173
               ||||||||||||||||||||||
Sbjct: 2438524 gcgcggccgcggtcggcgcggc 2438545
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 152     gcgcggccgcggtcggcgcggc 173
               ||||||||||||||||||||||
Sbjct: 3653670 gcgcggccgcggtcggcgcggc 3653691
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>gb|AC126012.22| Medicago truncatula clone mth2-27p4, complete sequence
          Length = 108900

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 686   ctactgatggcctcagcggtag 707
             ||||||||||||||||||||||
Sbjct: 27082 ctactgatggcctcagcggtag 27103
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>gb|AC141110.7| Medicago truncatula clone mth2-17i10, complete sequence
          Length = 113345

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 686   ctactgatggcctcagcggtag 707
             ||||||||||||||||||||||
Sbjct: 82304 ctactgatggcctcagcggtag 82325
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 152     gcgcggccgcggtcggcgcggc 173
               ||||||||||||||||||||||
Sbjct: 3396378 gcgcggccgcggtcggcgcggc 3396399
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>emb|AL939107.1|SCO939107 Streptomyces coelicolor A3(2) complete genome; segment 4/29
          Length = 298450

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 153   cgcggccgcggtcggcgcggcc 174
             ||||||||||||||||||||||
Sbjct: 35740 cgcggccgcggtcggcgcggcc 35761
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>emb|AL672236.18| Mouse DNA sequence from clone RP23-206L21 on chromosome 11 Contains a
              ribosomal protein S6 (Rps6) pseudogene, a novel gene, the
              gene for a novel immunoglobulin domain containing protein
              and two CpG islands, complete sequence
          Length = 219893

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 350    cccaagcagaggcagggcttga 371
              ||||||||||||||||||||||
Sbjct: 173698 cccaagcagaggcagggcttga 173719
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>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 148     gtcggcgcggccgcggtcggcgcggc 173
               |||| |||||||||||||||||||||
Sbjct: 2430271 gtcgccgcggccgcggtcggcgcggc 2430296
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 150     cggcgcggccgcggtcggcgcg 171
               ||||||||||||||||||||||
Sbjct: 1527678 cggcgcggccgcggtcggcgcg 1527699
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>emb|Z35330.1|BJRIBRNA B.japonicum (110) genes for 16S, 23S, 5S ribosomal RNA, transfer
           RNA-Ala transfer RNA-Ala
          Length = 6726

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 150 cggcgcggccgcggtcggcgcg 171
           ||||||||||||||||||||||
Sbjct: 293 cggcgcggccgcggtcggcgcg 314
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>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                 
Query: 142     gtcggtgtcggcgcggccgcggtcggcgcggccc 175
               |||||||||||||| |||| ||| ||||||||||
Sbjct: 2226150 gtcggtgtcggcgccgccgtggtaggcgcggccc 2226117
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>emb|AJ937765.1| Uncultured candidate division OP8 bacterium fosmid clone b3cf1.2.f09
          Length = 38920

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 149  tcggcgcggccgcggtcggcgcggcc 174
            ||||||||||||||| ||||||||||
Sbjct: 3475 tcggcgcggccgcggccggcgcggcc 3500
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>gb|AC166102.2| Mus musculus BAC clone RP23-397O23 from chromosome 17, complete sequence
          Length = 204842

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 542    attgcatgcatgtatgtatac 562
              |||||||||||||||||||||
Sbjct: 150318 attgcatgcatgtatgtatac 150338
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>emb|CR855305.12| Zebrafish DNA sequence from clone DKEY-98F17 in linkage group 5, complete
              sequence
          Length = 155542

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 655    tggatggatggacaaatgatg 675
              |||||||||||||||||||||
Sbjct: 126024 tggatggatggacaaatgatg 126044
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>emb|AL117382.28|HSJ881L22 Human DNA sequence from clone RP5-881L22 on chromosome 20 Contains the
             3' end of the GDAP1L1 gene for ganglioside-induced
             differentiation-associated protein 1-like 1, the R3HDML
             gene for R3HDML domain containing-like, the C20orf142
             gene, three novel genes, the 5' end of one variant of the
             HNF4A gene for hepatocyte nuclear factor 4 and two CpG
             islands, complete sequence
          Length = 131841

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 656   ggatggatggacaaatgatgt 676
             |||||||||||||||||||||
Sbjct: 92867 ggatggatggacaaatgatgt 92887
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 150    cggcgcggccgcggtcggcgcggcc 174
              |||||||||||| ||||||||||||
Sbjct: 638683 cggcgcggccgccgtcggcgcggcc 638707
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>dbj|AB168805.1| Macaca fascicularis testis cDNA, clone: QtsA-14950
          Length = 1928

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 656 ggatggatggacaaatgatgt 676
           |||||||||||||||||||||
Sbjct: 602 ggatggatggacaaatgatgt 582
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 144     cggtgtcggcgcggccgcggt 164
               |||||||||||||||||||||
Sbjct: 1996715 cggtgtcggcgcggccgcggt 1996695
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>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 153    cgcggccgcggtcggcgcggc 173
              |||||||||||||||||||||
Sbjct: 802848 cgcggccgcggtcggcgcggc 802828


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,563,554
Number of Sequences: 3902068
Number of extensions: 6563554
Number of successful extensions: 272680
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 271471
Number of HSP's gapped (non-prelim): 1209
length of query: 733
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 710
effective length of database: 17,143,297,704
effective search space: 12171741369840
effective search space used: 12171741369840
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
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