>emb|AL442067.16| Human DNA sequence from clone RP11-128N14 on chromosome 13 Contains the
             3' end of the gene for muscleblind-like protein (MBLL39),
             the RAP2A gene for a member of the RAS oncogene family and
             a CpG island, complete sequence
          Length = 150297

 Score = 46.1 bits (23), Expect = 0.085
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 184   agtaattactgtgtatatttttt 206
             |||||||||||||||||||||||
Sbjct: 75824 agtaattactgtgtatatttttt 75802

>ref|XM_483126.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1527

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 78  gcggcattgctgctgctgctatggt 102
           |||||||||||||||||||| ||||
Sbjct: 223 gcggcattgctgctgctgctgtggt 199

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 78       gcggcattgctgctgctgctatggt 102
                |||||||||||||||||||| ||||
Sbjct: 24393614 gcggcattgctgctgctgctgtggt 24393638

>dbj|AP005148.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
            clone:B1142B04
          Length = 161964

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 78   gcggcattgctgctgctgctatggt 102
            |||||||||||||||||||| ||||
Sbjct: 9330 gcggcattgctgctgctgctgtggt 9354

>dbj|AP004762.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0686H11
          Length = 135273

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 78     gcggcattgctgctgctgctatggt 102
              |||||||||||||||||||| ||||
Sbjct: 133918 gcggcattgctgctgctgctgtggt 133942

>dbj|AK066150.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013058G19, full
           insert sequence
          Length = 1527

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 78  gcggcattgctgctgctgctatggt 102
           |||||||||||||||||||| ||||
Sbjct: 223 gcggcattgctgctgctgctgtggt 199

>gb|CP000066.1| Trypanosoma brucei chromosome 3, complete sequence
          Length = 1653225

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 82      cattgctgctgctgctatgg 101
               ||||||||||||||||||||
Sbjct: 1097982 cattgctgctgctgctatgg 1097963

>gb|AC159430.1| Trypanosoma brucei chromosome 3 clone RPCI93-28C22, complete sequence
          Length = 142068

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 82    cattgctgctgctgctatgg 101
             ||||||||||||||||||||
Sbjct: 49595 cattgctgctgctgctatgg 49614

>ref|XM_819215.1| Trypanosoma brucei TREU927 clone RPCI93-28C22 hypothetical protein
           (Tb927.3.3940) partial mRNA
          Length = 1782

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 82  cattgctgctgctgctatgg 101
           ||||||||||||||||||||
Sbjct: 301 cattgctgctgctgctatgg 282

>gb|AC127568.4| Mus musculus BAC clone RP24-215P13 from chromosome 10, complete sequence
          Length = 206192

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 118    gacttggtctggagacagca 137
              ||||||||||||||||||||
Sbjct: 177918 gacttggtctggagacagca 177899

>gb|AC122829.4| Mus musculus BAC clone RP23-224F12 from 10, complete sequence
          Length = 155915

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 118    gacttggtctggagacagca 137
              ||||||||||||||||||||
Sbjct: 145763 gacttggtctggagacagca 145782

>gb|AC116685.9| Mus musculus chromosome 1, clone RP23-304F24, complete sequence
          Length = 173726

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 172   tctagtatatatagtaatta 191
             ||||||||||||||||||||
Sbjct: 65922 tctagtatatatagtaatta 65903

>emb|AL021026.1|HS127D3 Human DNA sequence from clone RP1-127D3 on chromosome 1q23-25 Contains
              the FMO3 gene for flavin containing monooxygenase 3, a
              novel flavin containing monooxygenase, the FMO2 gene for
              flavin containing monooxygenase 2, the 3' end of a novel
              gene, a novel gene and the 5' end of the FMO1 gene for
              flavin containing monooxygenase 1, complete sequence
          Length = 162075

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 176    gtatatatagtaattactgtgtat 199
              ||||||||||||| ||||||||||
Sbjct: 159642 gtatatatagtaaatactgtgtat 159619

>emb|CR354543.13| Zebrafish DNA sequence from clone DKEY-14M15 in linkage group 13,
              complete sequence
          Length = 140709

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 209    ccatatcatccagaaaagga 228
              ||||||||||||||||||||
Sbjct: 129281 ccatatcatccagaaaagga 129262

>emb|BX537143.5| Zebrafish DNA sequence from clone CH211-86H15 in linkage group 11,
              complete sequence
          Length = 204606

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 189    ttactgtgtatattttttgt 208
              ||||||||||||||||||||
Sbjct: 117679 ttactgtgtatattttttgt 117660

>gb|AC007390.4| Homo sapiens BAC clone RP11-423P10 from 2, complete sequence
          Length = 131011

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 306  ttagatttgcattagctcttttag 329
            |||| |||||||||||||||||||
Sbjct: 2373 ttagctttgcattagctcttttag 2396


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,926,035
Number of Sequences: 3902068
Number of extensions: 3926035
Number of successful extensions: 130725
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 130650
Number of HSP's gapped (non-prelim): 75
length of query: 394
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 372
effective length of database: 17,147,199,772
effective search space: 6378758315184
effective search space used: 6378758315184
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)