ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal37h08 |
|---|---|
| Clone Library Name | barley_pub |
>DBP2_ASPOR (Q2U070) ATP-dependent RNA helicase dbp2 (EC 3.6.1.-)| Length = 554 Score = 125 bits (313), Expect = 1e-28 Identities = 59/76 (77%), Positives = 65/76 (85%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DV+GIAETGSGKTLSY LP +VH+ AQP L GDGPIVL+LAPTRELAVQIQAE TKFG Sbjct: 169 DVVGIAETGSGKTLSYCLPAIVHINAQPLLAPGDGPIVLVLAPTRELAVQIQAEITKFGK 228 Query: 184 YSRTRSTCIYGGAPKG 231 SR R+TC+YGG PKG Sbjct: 229 SSRIRNTCVYGGVPKG 244 Score = 45.8 bits (107), Expect = 1e-04 Identities = 22/37 (59%), Positives = 26/37 (70%) Frame = +2 Query: 194 LEAHVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 L H + RD+VL EFK GKSPIM ATDVA+RG+ Sbjct: 405 LSIHGDKQQQERDWVLNEFKTGKSPIMVATDVASRGI 441
>DBP2_EMENI (Q5B0J9) ATP-dependent RNA helicase dbp2 (EC 3.6.1.-)| Length = 563 Score = 124 bits (310), Expect = 3e-28 Identities = 59/76 (77%), Positives = 65/76 (85%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DV+GIAETGSGKTLSY LP +VH+ AQP L GDGPIVLILAPTRELAVQIQAE +KFG Sbjct: 179 DVVGIAETGSGKTLSYCLPAIVHINAQPLLAPGDGPIVLILAPTRELAVQIQAEISKFGK 238 Query: 184 YSRTRSTCIYGGAPKG 231 SR R+TC+YGG PKG Sbjct: 239 SSRIRNTCVYGGVPKG 254 Score = 45.8 bits (107), Expect = 1e-04 Identities = 22/37 (59%), Positives = 26/37 (70%) Frame = +2 Query: 194 LEAHVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 L H + RD+VL EFK GKSPIM ATDVA+RG+ Sbjct: 415 LSIHGDKQQQERDWVLNEFKTGKSPIMVATDVASRGI 451
>DBP2_CANAL (Q59LU0) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 562 Score = 123 bits (308), Expect = 5e-28 Identities = 57/76 (75%), Positives = 66/76 (86%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 D+IGIA TGSGKTLSY LP +VH+ AQP+L+ GDGPIVL+LAPTRELAVQIQ E +KFG Sbjct: 166 DMIGIAATGSGKTLSYCLPSIVHINAQPQLQYGDGPIVLVLAPTRELAVQIQTECSKFGK 225 Query: 184 YSRTRSTCIYGGAPKG 231 SR R+TC+YGGAPKG Sbjct: 226 SSRIRNTCVYGGAPKG 241 Score = 41.6 bits (96), Expect = 0.002 Identities = 20/37 (54%), Positives = 26/37 (70%) Frame = +2 Query: 194 LEAHVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 L H ++ RD+VL EF+ GK+ IM ATDVAARG+ Sbjct: 402 LAIHGDKEQNERDWVLDEFRKGKTSIMVATDVAARGI 438
>DBP2_ASPFU (Q4X195) ATP-dependent RNA helicase dbp2 (EC 3.6.1.-)| Length = 547 Score = 122 bits (307), Expect = 6e-28 Identities = 58/76 (76%), Positives = 65/76 (85%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DV+GIAETGSGKTL+Y LP +VH+ AQP L GDGPIVLILAPTRELAVQIQAE +KFG Sbjct: 160 DVVGIAETGSGKTLTYCLPAIVHINAQPLLAPGDGPIVLILAPTRELAVQIQAEISKFGK 219 Query: 184 YSRTRSTCIYGGAPKG 231 SR R+TC+YGG PKG Sbjct: 220 SSRIRNTCVYGGVPKG 235 Score = 45.8 bits (107), Expect = 1e-04 Identities = 22/37 (59%), Positives = 26/37 (70%) Frame = +2 Query: 194 LEAHVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 L H + RD+VL EFK GKSPIM ATDVA+RG+ Sbjct: 396 LSIHGDKQQQERDWVLNEFKTGKSPIMVATDVASRGI 432
>DBP2_DEBHA (Q6BY27) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 536 Score = 122 bits (306), Expect = 8e-28 Identities = 57/76 (75%), Positives = 65/76 (85%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 D++GIA TGSGKTLSY LP +VH+ AQP L GDGPIVL+LAPTRELAVQIQ E +KFGS Sbjct: 144 DMVGIASTGSGKTLSYCLPSIVHINAQPLLSPGDGPIVLVLAPTRELAVQIQQECSKFGS 203 Query: 184 YSRTRSTCIYGGAPKG 231 SR R+TC+YGGAPKG Sbjct: 204 SSRIRNTCVYGGAPKG 219 Score = 46.2 bits (108), Expect = 7e-05 Identities = 23/37 (62%), Positives = 26/37 (70%) Frame = +2 Query: 194 LEAHVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 L H + RD+VL EFK GKSPIM ATDVAARG+ Sbjct: 380 LAIHGDKQQGERDWVLKEFKTGKSPIMVATDVAARGI 416
>DBP2_NEUCR (Q7SBC6) ATP-dependent RNA helicase dbp-2 (EC 3.6.1.-)| Length = 562 Score = 120 bits (302), Expect = 2e-27 Identities = 57/76 (75%), Positives = 64/76 (84%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DV+GIAETGSGKTL+Y LP +VH+ AQP L GDGPIVLILAPTRELAVQIQ E +KFG Sbjct: 171 DVVGIAETGSGKTLTYCLPAIVHINAQPLLAPGDGPIVLILAPTRELAVQIQQEISKFGK 230 Query: 184 YSRTRSTCIYGGAPKG 231 SR R+TC+YGG PKG Sbjct: 231 SSRIRNTCVYGGVPKG 246 Score = 45.1 bits (105), Expect = 2e-04 Identities = 21/37 (56%), Positives = 27/37 (72%) Frame = +2 Query: 194 LEAHVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 L H ++ RD+VL +FK GKSPIM ATDVA+RG+ Sbjct: 409 LSIHGDKQQNERDWVLDQFKTGKSPIMVATDVASRGI 445
>DBP2_CANGA (Q6FLF3) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 544 Score = 120 bits (300), Expect = 4e-27 Identities = 55/76 (72%), Positives = 64/76 (84%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 D++GIA TGSGKTLSY LPG+VH+ AQP L GDGPIVL+LAPTRELAVQIQ E +KFG Sbjct: 149 DMVGIAATGSGKTLSYCLPGIVHINAQPLLSPGDGPIVLVLAPTRELAVQIQKECSKFGK 208 Query: 184 YSRTRSTCIYGGAPKG 231 SR R+TC+YGG P+G Sbjct: 209 SSRIRNTCVYGGVPRG 224 Score = 43.1 bits (100), Expect = 6e-04 Identities = 21/37 (56%), Positives = 25/37 (67%) Frame = +2 Query: 194 LEAHVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 L H + RD+VL EF+ G SPIM ATDVAARG+ Sbjct: 385 LAIHGDKDQRERDWVLNEFRTGNSPIMVATDVAARGI 421
>DBP2_KLULA (Q6CIV2) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 554 Score = 119 bits (298), Expect = 7e-27 Identities = 55/75 (73%), Positives = 64/75 (85%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 D+IG+A TGSGKTLSY LPG+VH+ AQP L GDGPIVL+LAPTRELAVQIQ E +KFG+ Sbjct: 152 DMIGVAATGSGKTLSYCLPGIVHINAQPLLSPGDGPIVLVLAPTRELAVQIQKECSKFGA 211 Query: 184 YSRTRSTCIYGGAPK 228 SR R+TC+YGG PK Sbjct: 212 SSRIRNTCVYGGVPK 226 Score = 48.1 bits (113), Expect = 2e-05 Identities = 22/37 (59%), Positives = 29/37 (78%) Frame = +2 Query: 194 LEAHVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 L H ++ RD+VLAEF++G+SPIM ATDVAARG+ Sbjct: 388 LAIHGDKAQNERDWVLAEFRSGRSPIMVATDVAARGI 424
>DBP2_GIBZE (Q4IF76) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 555 Score = 119 bits (298), Expect = 7e-27 Identities = 56/76 (73%), Positives = 63/76 (82%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DV+GIAETGSGKTL+Y LP +VH+ AQP L GDGPIVL+LAPTRELAVQIQ E KFG Sbjct: 173 DVVGIAETGSGKTLTYCLPSIVHINAQPLLAPGDGPIVLVLAPTRELAVQIQEEMKKFGR 232 Query: 184 YSRTRSTCIYGGAPKG 231 SR R+TC+YGG PKG Sbjct: 233 SSRIRNTCVYGGVPKG 248 Score = 45.1 bits (105), Expect = 2e-04 Identities = 21/37 (56%), Positives = 27/37 (72%) Frame = +2 Query: 194 LEAHVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 L H ++ RD+VL +FK GKSPIM ATDVA+RG+ Sbjct: 409 LSIHGDKQQNERDWVLDQFKTGKSPIMVATDVASRGI 445
>DBP2_YARLI (Q6C4D4) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 552 Score = 119 bits (298), Expect = 7e-27 Identities = 55/76 (72%), Positives = 63/76 (82%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DVIGIA TGSGKTLSY LP +VH+ AQP L GDGPIVL+LAPTRELAVQIQ E +KFG Sbjct: 155 DVIGIASTGSGKTLSYCLPAIVHINAQPMLSHGDGPIVLVLAPTRELAVQIQQECSKFGK 214 Query: 184 YSRTRSTCIYGGAPKG 231 S+ R+TC+YGG P+G Sbjct: 215 SSKIRNTCVYGGVPRG 230 Score = 44.3 bits (103), Expect = 3e-04 Identities = 21/37 (56%), Positives = 26/37 (70%) Frame = +2 Query: 194 LEAHVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 L H + RD+VL EF+ GKSPIM ATDVA+RG+ Sbjct: 391 LAIHGDKQQQERDWVLNEFRQGKSPIMVATDVASRGI 427
>DBP2_YEAST (P24783) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-) (DEAD box| protein 2) (p68-like protein) Length = 546 Score = 118 bits (296), Expect = 1e-26 Identities = 55/75 (73%), Positives = 63/75 (84%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 D++GIA TGSGKTLSY LPG+VH+ AQP L GDGPIVL+LAPTRELAVQIQ E +KFG Sbjct: 152 DMVGIAATGSGKTLSYCLPGIVHINAQPLLAPGDGPIVLVLAPTRELAVQIQTECSKFGH 211 Query: 184 YSRTRSTCIYGGAPK 228 SR R+TC+YGG PK Sbjct: 212 SSRIRNTCVYGGVPK 226 Score = 46.6 bits (109), Expect = 6e-05 Identities = 22/37 (59%), Positives = 27/37 (72%) Frame = +2 Query: 194 LEAHVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 L H + RD+VL EF+NG+SPIM ATDVAARG+ Sbjct: 388 LAIHGDKDQRERDWVLQEFRNGRSPIMVATDVAARGI 424
>DBP2_CRYNE (Q5KFM6) ATP-dependent RNA helicase DBP2-A (EC 3.6.1.-)| Length = 540 Score = 118 bits (296), Expect = 1e-26 Identities = 57/76 (75%), Positives = 64/76 (84%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 D++ IAETGSGKT+S+ LP +VH+ AQP L GDGPIVLILAPTRELAVQIQ EATKFG Sbjct: 149 DLVAIAETGSGKTISFCLPAMVHINAQPLLAPGDGPIVLILAPTRELAVQIQTEATKFGQ 208 Query: 184 YSRTRSTCIYGGAPKG 231 SR R+T IYGGAPKG Sbjct: 209 SSRIRNTAIYGGAPKG 224 Score = 47.8 bits (112), Expect = 3e-05 Identities = 25/47 (53%), Positives = 31/47 (65%) Frame = +2 Query: 164 KLQSLDHTRELEAHVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 K +D L H + RD+VLAEFK+G+SPIM ATDVA+RGL Sbjct: 374 KFLRMDGWPALAIHGDKQQAERDWVLAEFKSGRSPIMLATDVASRGL 420
>DBP2_SCHPO (P24782) ATP-dependent RNA helicase dbp2 (EC 3.6.1.-) (p68-like| protein) Length = 550 Score = 118 bits (295), Expect = 2e-26 Identities = 54/76 (71%), Positives = 63/76 (82%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 D++GI+ TGSGKTLSY LP +VH+ AQP L GDGPIVL+LAPTRELAVQIQ E TKFG Sbjct: 161 DMVGISATGSGKTLSYCLPAIVHINAQPLLSPGDGPIVLVLAPTRELAVQIQQECTKFGK 220 Query: 184 YSRTRSTCIYGGAPKG 231 SR R+TC+YGG P+G Sbjct: 221 SSRIRNTCVYGGVPRG 236 Score = 44.7 bits (104), Expect = 2e-04 Identities = 21/37 (56%), Positives = 26/37 (70%) Frame = +2 Query: 194 LEAHVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 L H + RD+VL EF+ GKSPIM ATDVA+RG+ Sbjct: 397 LAIHGDKAQDERDWVLNEFRTGKSPIMVATDVASRGI 433
>DBP2_ASHGO (Q755N4) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 557 Score = 118 bits (295), Expect = 2e-26 Identities = 54/75 (72%), Positives = 63/75 (84%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 D+IG+A TGSGKTLSY LPG+VH+ AQP L GDGP+VL+LAPTRELAVQIQ E +KFG Sbjct: 153 DMIGVAATGSGKTLSYCLPGIVHINAQPLLSPGDGPVVLVLAPTRELAVQIQKECSKFGR 212 Query: 184 YSRTRSTCIYGGAPK 228 SR R+TC+YGG PK Sbjct: 213 SSRIRNTCVYGGVPK 227 Score = 34.3 bits (77), Expect = 0.29 Identities = 14/25 (56%), Positives = 19/25 (76%) Frame = +2 Query: 230 DYVLAEFKNGKSPIMAATDVAARGL 304 D L +++ G+SPIM ATDV ARG+ Sbjct: 401 DCTLNDYRTGRSPIMVATDVVARGI 425
>DDX17_MOUSE (Q501J6) Probable ATP-dependent RNA helicase DDX17 (EC 3.6.1.-)| (DEAD box protein 17) Length = 650 Score = 112 bits (280), Expect = 8e-25 Identities = 51/76 (67%), Positives = 63/76 (82%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 D++GIA+TGSGKTL+Y+LP +VH+ QP LE+GDGPI L+LAPTRELA Q+Q A +G Sbjct: 131 DMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQVQQVADDYGK 190 Query: 184 YSRTRSTCIYGGAPKG 231 SR +STCIYGGAPKG Sbjct: 191 CSRLKSTCIYGGAPKG 206 Score = 41.6 bits (96), Expect = 0.002 Identities = 18/26 (69%), Positives = 24/26 (92%) Frame = +2 Query: 227 RDYVLAEFKNGKSPIMAATDVAARGL 304 RD+VL EF++GK+PI+ ATDVA+RGL Sbjct: 378 RDWVLNEFRSGKAPILIATDVASRGL 403
>DDX17_HUMAN (Q92841) Probable ATP-dependent RNA helicase DDX17 (EC 3.6.1.-)| (DEAD box protein 17) (RNA-dependent helicase p72) (DEAD box protein p72) Length = 650 Score = 112 bits (280), Expect = 8e-25 Identities = 51/76 (67%), Positives = 63/76 (82%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 D++GIA+TGSGKTL+Y+LP +VH+ QP LE+GDGPI L+LAPTRELA Q+Q A +G Sbjct: 131 DMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQVQQVADDYGK 190 Query: 184 YSRTRSTCIYGGAPKG 231 SR +STCIYGGAPKG Sbjct: 191 CSRLKSTCIYGGAPKG 206 Score = 41.6 bits (96), Expect = 0.002 Identities = 18/26 (69%), Positives = 24/26 (92%) Frame = +2 Query: 227 RDYVLAEFKNGKSPIMAATDVAARGL 304 RD+VL EF++GK+PI+ ATDVA+RGL Sbjct: 378 RDWVLNEFRSGKAPILIATDVASRGL 403
>DDX5_HUMAN (P17844) Probable ATP-dependent RNA helicase DDX5 (EC 3.6.1.-)| (DEAD box protein 5) (RNA helicase p68) Length = 614 Score = 108 bits (269), Expect = 2e-23 Identities = 49/76 (64%), Positives = 62/76 (81%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 D++G+A+TGSGKTLSY+LP +VH+ QP LE+GDGPI L+LAPTRELA Q+Q A ++ Sbjct: 133 DMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQQVAAEYCR 192 Query: 184 YSRTRSTCIYGGAPKG 231 R +STCIYGGAPKG Sbjct: 193 ACRLKSTCIYGGAPKG 208 Score = 43.1 bits (100), Expect = 6e-04 Identities = 20/34 (58%), Positives = 26/34 (76%) Frame = +2 Query: 203 HVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 H + RD+VL EFK+GK+PI+ ATDVA+RGL Sbjct: 372 HGDKSQQERDWVLNEFKHGKAPILIATDVASRGL 405
>RM62_DROME (P19109) ATP-dependent RNA helicase p62 (EC 3.6.1.-)| Length = 719 Score = 107 bits (268), Expect = 2e-23 Identities = 50/74 (67%), Positives = 61/74 (82%) Frame = +1 Query: 10 IGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYS 189 +GIA+TGSGKTL YILP +VH+ Q L++GDGPI L+LAPTRELA QIQ AT+FGS S Sbjct: 322 VGIAKTGSGKTLGYILPAIVHINNQQPLQRGDGPIALVLAPTRELAQQIQQVATEFGSSS 381 Query: 190 RTRSTCIYGGAPKG 231 R+TC++GGAPKG Sbjct: 382 YVRNTCVFGGAPKG 395 Score = 41.6 bits (96), Expect = 0.002 Identities = 19/26 (73%), Positives = 23/26 (88%) Frame = +2 Query: 227 RDYVLAEFKNGKSPIMAATDVAARGL 304 RD+VL EF++GKS I+ ATDVAARGL Sbjct: 569 RDFVLREFRSGKSNILVATDVAARGL 594
>DDX5_MOUSE (Q61656) Probable ATP-dependent RNA helicase DDX5 (EC 3.6.1.-)| (DEAD box protein 5) (RNA helicase p68) (DEAD box RNA helicase DEAD1) (mDEAD1) Length = 614 Score = 106 bits (264), Expect = 6e-23 Identities = 48/76 (63%), Positives = 61/76 (80%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 D++G+A+TGSGKTLSY+LP +VH+ P LE+GDGPI L+LAPTRELA Q+Q A ++ Sbjct: 133 DMVGVAQTGSGKTLSYLLPAIVHINHHPFLERGDGPICLVLAPTRELAQQVQQVAAEYCR 192 Query: 184 YSRTRSTCIYGGAPKG 231 R +STCIYGGAPKG Sbjct: 193 ACRLKSTCIYGGAPKG 208 Score = 43.1 bits (100), Expect = 6e-04 Identities = 20/34 (58%), Positives = 26/34 (76%) Frame = +2 Query: 203 HVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 H + RD+VL EFK+GK+PI+ ATDVA+RGL Sbjct: 372 HGDKSQQERDWVLNEFKHGKAPILIATDVASRGL 405
>DBP2_USTMA (Q4PHU9) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 552 Score = 104 bits (260), Expect = 2e-22 Identities = 48/76 (63%), Positives = 58/76 (76%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 D++ IAETGSGKT+ + LP +VH+ AQP L+ GDGPI LILAPTRELA QIQ E +FG Sbjct: 169 DLVAIAETGSGKTIGFALPAMVHINAQPLLKPGDGPIALILAPTRELANQIQVECNRFGG 228 Query: 184 YSRTRSTCIYGGAPKG 231 SR R+ +YGG PKG Sbjct: 229 SSRLRTCAVYGGVPKG 244 Score = 44.7 bits (104), Expect = 2e-04 Identities = 22/37 (59%), Positives = 27/37 (72%) Frame = +2 Query: 194 LEAHVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 L H + RD+VLAEFK+G+SPIM AT VA+RGL Sbjct: 404 LAIHGDKQQQERDWVLAEFKSGRSPIMVATAVASRGL 440
>DB10_NICSY (P46942) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-)| Length = 607 Score = 94.7 bits (234), Expect = 2e-19 Identities = 45/76 (59%), Positives = 56/76 (73%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 D++ IA+TGSGKTL Y++P +H+ Q R GP +L+L+PTRELA QIQAEA KFG Sbjct: 184 DIVAIAKTGSGKTLGYLMPAFIHL-QQRRKNPQLGPTILVLSPTRELATQIQAEAVKFGK 242 Query: 184 YSRTRSTCIYGGAPKG 231 SR TC+YGGAPKG Sbjct: 243 SSRISCTCLYGGAPKG 258 Score = 43.5 bits (101), Expect = 5e-04 Identities = 18/26 (69%), Positives = 24/26 (92%) Frame = +2 Query: 227 RDYVLAEFKNGKSPIMAATDVAARGL 304 RDYVL++F+ G+SP++ ATDVAARGL Sbjct: 428 RDYVLSQFRAGRSPVLVATDVAARGL 453
>HE64_TRYBB (Q26696) Putative DEAD-box RNA helicase HEL64 (EC 3.6.1.-)| Length = 568 Score = 85.5 bits (210), Expect = 1e-16 Identities = 41/76 (53%), Positives = 54/76 (71%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 D++G+A+TGSGKTL +++P L H+ Q L GDGP+V++LAPTRELA QI+ E TK Sbjct: 141 DLVGVAKTGSGKTLGFMVPALAHIAVQEPLRSGDGPMVVVLAPTRELAQQIE-EETKKVI 199 Query: 184 YSRTRSTCIYGGAPKG 231 C+YGGAPKG Sbjct: 200 PGDVYCGCVYGGAPKG 215 Score = 30.8 bits (68), Expect = 3.2 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = +2 Query: 203 HVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 H + R+++LA F+ + ATDVAARGL Sbjct: 376 HGDKEQRQREFILARFRKDPRLCLVATDVAARGL 409
>PRP5_DEBHA (Q6BML1) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 913 Score = 83.6 bits (205), Expect = 4e-16 Identities = 40/73 (54%), Positives = 51/73 (69%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 D+IG+A+TGSGKTLS++LP L H+ QP L +GDGPI LI+ PTRELA+QI E F Sbjct: 356 DIIGVAKTGSGKTLSFVLPLLRHIQDQPPLRRGDGPIGLIMTPTRELALQIHKELNHFTK 415 Query: 184 YSRTRSTCIYGGA 222 S C +GG+ Sbjct: 416 KLNISSCCCFGGS 428
>PRP5_GIBZE (Q4IP34) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 1227 Score = 83.2 bits (204), Expect = 5e-16 Identities = 40/74 (54%), Positives = 51/74 (68%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DVIG+A+TGSGKT++++LP H+ QP L+ DGPI LI+ PTRELAVQI + F Sbjct: 636 DVIGVAKTGSGKTVAFLLPMFRHIKDQPPLKDTDGPIGLIMTPTRELAVQIHKDCKPFLK 695 Query: 184 YSRTRSTCIYGGAP 225 R+ C YGGAP Sbjct: 696 MMGLRAVCAYGGAP 709 Score = 33.5 bits (75), Expect = 0.50 Identities = 15/26 (57%), Positives = 19/26 (73%) Frame = +2 Query: 227 RDYVLAEFKNGKSPIMAATDVAARGL 304 RD +++FK G PI+ AT VAARGL Sbjct: 886 RDSTISDFKKGVVPILIATSVAARGL 911
>DDX53_HUMAN (Q86TM3) Probable ATP-dependent RNA helicase DDX53 (EC 3.6.1.-)| (DEAD box protein 53) (DEAD box protein CAGE) (Cancer-associated gene protein) Length = 631 Score = 82.8 bits (203), Expect = 7e-16 Identities = 39/73 (53%), Positives = 57/73 (78%), Gaps = 1/73 (1%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQP-RLEQGDGPIVLILAPTRELAVQIQAEATKFG 180 D+I +A+TG+GKTLSY++PG +H+ +QP EQ +GP +L+L PTRELA+ ++AE +K+ Sbjct: 261 DLIVVAQTGTGKTLSYLMPGFIHLDSQPISREQRNGPGMLVLTPTRELALHVEAECSKY- 319 Query: 181 SYSRTRSTCIYGG 219 SY +S CIYGG Sbjct: 320 SYKGLKSICIYGG 332
>DDX46_RAT (Q62780) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)| (DEAD box protein 46) (Helicase of 117.4 kDa) Length = 1032 Score = 82.0 bits (201), Expect = 1e-15 Identities = 38/72 (52%), Positives = 51/72 (70%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 D+IGIA+TGSGKT++++LP H+ Q LE+G+GPI +I+ PTRELA+QI E KF Sbjct: 411 DLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSK 470 Query: 184 YSRTRSTCIYGG 219 R C+YGG Sbjct: 471 TLGLRVVCVYGG 482 Score = 33.9 bits (76), Expect = 0.38 Identities = 15/37 (40%), Positives = 23/37 (62%) Frame = +2 Query: 194 LEAHVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 + H ++ RD ++ +FKNG ++ AT VAARGL Sbjct: 647 MSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGL 683
>DDX46_PONPY (Q5R6D8) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)| (DEAD box protein 46) Length = 1032 Score = 82.0 bits (201), Expect = 1e-15 Identities = 38/72 (52%), Positives = 51/72 (70%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 D+IGIA+TGSGKT++++LP H+ Q LE+G+GPI +I+ PTRELA+QI E KF Sbjct: 411 DLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSK 470 Query: 184 YSRTRSTCIYGG 219 R C+YGG Sbjct: 471 TLGLRVVCVYGG 482 Score = 33.9 bits (76), Expect = 0.38 Identities = 15/37 (40%), Positives = 23/37 (62%) Frame = +2 Query: 194 LEAHVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 + H ++ RD ++ +FKNG ++ AT VAARGL Sbjct: 647 MSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGL 683
>DDX46_MOUSE (Q569Z5) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)| (DEAD box protein 46) Length = 1032 Score = 82.0 bits (201), Expect = 1e-15 Identities = 38/72 (52%), Positives = 51/72 (70%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 D+IGIA+TGSGKT++++LP H+ Q LE+G+GPI +I+ PTRELA+QI E KF Sbjct: 411 DLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSK 470 Query: 184 YSRTRSTCIYGG 219 R C+YGG Sbjct: 471 TLGLRVVCVYGG 482 Score = 33.9 bits (76), Expect = 0.38 Identities = 15/37 (40%), Positives = 23/37 (62%) Frame = +2 Query: 194 LEAHVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 + H ++ RD ++ +FKNG ++ AT VAARGL Sbjct: 647 MSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGL 683
>DDX46_HUMAN (Q7L014) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)| (DEAD box protein 46) (PRP5 homolog) Length = 1032 Score = 82.0 bits (201), Expect = 1e-15 Identities = 38/72 (52%), Positives = 51/72 (70%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 D+IGIA+TGSGKT++++LP H+ Q LE+G+GPI +I+ PTRELA+QI E KF Sbjct: 411 DLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSK 470 Query: 184 YSRTRSTCIYGG 219 R C+YGG Sbjct: 471 TLGLRVVCVYGG 482 Score = 33.9 bits (76), Expect = 0.38 Identities = 15/37 (40%), Positives = 23/37 (62%) Frame = +2 Query: 194 LEAHVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 + H ++ RD ++ +FKNG ++ AT VAARGL Sbjct: 647 MSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGL 683
>PRP11_SCHPO (Q9P7C7) Pre-mRNA-processing ATP-dependent RNA helicase prp11 (EC| 3.6.1.-) Length = 1014 Score = 81.6 bits (200), Expect = 2e-15 Identities = 39/74 (52%), Positives = 51/74 (68%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DVIG+A+TGSGKT++++LP H+ Q L+ G+GPI +I+ PTRELAVQI E F Sbjct: 457 DVIGVAKTGSGKTIAFLLPMFRHIKDQRPLKTGEGPIAIIMTPTRELAVQIFRECKPFLK 516 Query: 184 YSRTRSTCIYGGAP 225 R+ C YGGAP Sbjct: 517 LLNIRACCAYGGAP 530
>DDX43_HUMAN (Q9NXZ2) Probable ATP-dependent RNA helicase DDX43 (EC 3.6.1.-)| (DEAD box protein 43) (DEAD box protein HAGE) (Helical antigen) Length = 648 Score = 81.3 bits (199), Expect = 2e-15 Identities = 38/73 (52%), Positives = 55/73 (75%), Gaps = 1/73 (1%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLE-QGDGPIVLILAPTRELAVQIQAEATKFG 180 D+IG+A+TG+GKTL Y++PG +H+ QP L+ Q + P +L+L PTRELA+Q++ E K+ Sbjct: 281 DLIGVAQTGTGKTLCYLMPGFIHLVLQPSLKGQRNRPGMLVLTPTRELALQVEGECCKY- 339 Query: 181 SYSRTRSTCIYGG 219 SY RS C+YGG Sbjct: 340 SYKGLRSVCVYGG 352 Score = 30.4 bits (67), Expect = 4.2 Identities = 14/26 (53%), Positives = 18/26 (69%) Frame = +2 Query: 227 RDYVLAEFKNGKSPIMAATDVAARGL 304 R+ L FK GK I+ ATD+A+RGL Sbjct: 526 REKALENFKTGKVRILIATDLASRGL 551
>PRP5_USTMA (Q4PFD9) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 1156 Score = 79.0 bits (193), Expect = 1e-14 Identities = 36/74 (48%), Positives = 51/74 (68%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 D+IG+A+TGSGKT++++LP H+ Q +E +GP+ +I+ PTRELAVQI E F Sbjct: 515 DIIGVAKTGSGKTMAFLLPMFRHIKDQRPVEPSEGPVGIIMTPTRELAVQIYREMRPFIK 574 Query: 184 YSRTRSTCIYGGAP 225 R+ C+YGGAP Sbjct: 575 ALGLRAACVYGGAP 588 Score = 33.5 bits (75), Expect = 0.50 Identities = 15/26 (57%), Positives = 19/26 (73%) Frame = +2 Query: 227 RDYVLAEFKNGKSPIMAATDVAARGL 304 RD +++FK G PI+ AT VAARGL Sbjct: 766 RDETISDFKAGNVPIVTATSVAARGL 791
>PRP5_CANGA (Q6FML5) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 816 Score = 77.4 bits (189), Expect = 3e-14 Identities = 42/74 (56%), Positives = 51/74 (68%), Gaps = 1/74 (1%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGD-GPIVLILAPTRELAVQIQAEATKFG 180 DVIGI++TGSGKT+SY+LP + HV AQ +L G+ GPI +I APTRELAVQI E K Sbjct: 291 DVIGISKTGSGKTISYLLPMIRHVKAQKKLRNGETGPIAVIFAPTRELAVQINEEVQKLI 350 Query: 181 SYSRTRSTCIYGGA 222 S S C GG+ Sbjct: 351 SDLDISSICCTGGS 364
>PRP5_ASPFU (Q4WT99) Pre-mRNA-processing ATP-dependent RNA helicase prp5 (EC| 3.6.1.-) Length = 1211 Score = 77.4 bits (189), Expect = 3e-14 Identities = 37/74 (50%), Positives = 49/74 (66%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DVIG+A+TGSGKT+++++P H+ Q LE +GPI LI+ PTRELA QI + F Sbjct: 614 DVIGVAKTGSGKTIAFLIPMFRHIRDQRPLENMEGPIGLIMTPTRELATQIHKDCKPFLK 673 Query: 184 YSRTRSTCIYGGAP 225 R+ C YGGAP Sbjct: 674 ALNLRAVCAYGGAP 687 Score = 31.2 bits (69), Expect = 2.5 Identities = 14/26 (53%), Positives = 18/26 (69%) Frame = +2 Query: 227 RDYVLAEFKNGKSPIMAATDVAARGL 304 RD + +FK G P++ AT VAARGL Sbjct: 866 RDSTIEDFKAGIFPVLIATSVAARGL 891
>PRP5_EMENI (Q5BDW4) Pre-mRNA-processing ATP-dependent RNA helicase prp5 (EC| 3.6.1.-) Length = 1173 Score = 77.4 bits (189), Expect = 3e-14 Identities = 37/74 (50%), Positives = 49/74 (66%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DVIG+A+TGSGKT+++++P H+ Q LE +GPI LI+ PTRELA QI + F Sbjct: 580 DVIGVAKTGSGKTMAFLIPMFRHIKDQRPLENMEGPIGLIMTPTRELATQIHKDCKPFLK 639 Query: 184 YSRTRSTCIYGGAP 225 R+ C YGGAP Sbjct: 640 ALNLRAVCAYGGAP 653 Score = 31.2 bits (69), Expect = 2.5 Identities = 14/26 (53%), Positives = 18/26 (69%) Frame = +2 Query: 227 RDYVLAEFKNGKSPIMAATDVAARGL 304 RD + +FK G P++ AT VAARGL Sbjct: 832 RDSTIEDFKAGIFPVLIATSVAARGL 857
>PRP5_ASPOR (Q2U2J6) Pre-mRNA-processing ATP-dependent RNA helicase prp5 (EC| 3.6.1.-) Length = 1186 Score = 77.0 bits (188), Expect = 4e-14 Identities = 36/74 (48%), Positives = 49/74 (66%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DVIG+A+TGSGKT+++++P H+ Q LE +GP+ LI+ PTRELA QI + F Sbjct: 593 DVIGVAKTGSGKTIAFLIPMFRHIKDQRPLENMEGPVGLIMTPTRELATQIHKDCKPFLK 652 Query: 184 YSRTRSTCIYGGAP 225 R+ C YGGAP Sbjct: 653 ALNLRAVCAYGGAP 666 Score = 31.2 bits (69), Expect = 2.5 Identities = 14/26 (53%), Positives = 18/26 (69%) Frame = +2 Query: 227 RDYVLAEFKNGKSPIMAATDVAARGL 304 RD + +FK G P++ AT VAARGL Sbjct: 845 RDSTIEDFKAGIFPVLIATSVAARGL 870
>PRP5_CANAL (Q5ADL0) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 884 Score = 76.3 bits (186), Expect = 7e-14 Identities = 41/74 (55%), Positives = 50/74 (67%), Gaps = 1/74 (1%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DVIGIA+TGSGKTLSY+LP L H+ Q + GPI LIL+PTRELA+QI+ E F Sbjct: 333 DVIGIAKTGSGKTLSYVLPMLRHIQDQQFSKDNQGPIGLILSPTRELALQIEKEILNFTK 392 Query: 184 YSRT-RSTCIYGGA 222 + R C YGG+ Sbjct: 393 RNNNLRVCCCYGGS 406
>PRP5_KLULA (Q6CKI1) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 812 Score = 75.5 bits (184), Expect = 1e-13 Identities = 42/74 (56%), Positives = 52/74 (70%), Gaps = 1/74 (1%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGD-GPIVLILAPTRELAVQIQAEATKFG 180 DVIGI++TGSGKT++++LP + + AQP L + GPI LIL PTRELAVQIQ EA KF Sbjct: 285 DVIGISKTGSGKTVAFLLPLVRQIKAQPPLAPDETGPIGLILTPTRELAVQIQEEALKFC 344 Query: 181 SYSRTRSTCIYGGA 222 S S C GG+ Sbjct: 345 KGSGISSICCVGGS 358
>DDX46_BRARE (Q4TVV3) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)| (DEAD box protein 46) Length = 1018 Score = 74.7 bits (182), Expect = 2e-13 Identities = 34/72 (47%), Positives = 49/72 (68%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 D+IGIA+TGSGKT++++LP H+ Q + + +GP+ +I+ PTRELA+QI E KF Sbjct: 379 DLIGIAKTGSGKTIAFLLPMFRHILDQRPVGEAEGPLAVIMTPTRELALQITKECKKFSK 438 Query: 184 YSRTRSTCIYGG 219 R C+YGG Sbjct: 439 SLALRVVCVYGG 450 Score = 33.5 bits (75), Expect = 0.50 Identities = 15/37 (40%), Positives = 23/37 (62%) Frame = +2 Query: 194 LEAHVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 + H ++ RD ++ +FKNG ++ AT VAARGL Sbjct: 615 MSLHGGIDQYDRDSIINDFKNGACRLLVATSVAARGL 651
>PRP5_YEAST (P21372) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 849 Score = 73.6 bits (179), Expect = 4e-13 Identities = 43/75 (57%), Positives = 52/75 (69%), Gaps = 2/75 (2%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQ-PRLEQGDGPIVLILAPTRELAVQIQAEATKFG 180 DVIGI++TGSGKT+SY+LP L V AQ P + GP+ LILAPTRELA+QI E TKF Sbjct: 295 DVIGISKTGSGKTISYLLPLLRQVKAQRPLSKHETGPMGLILAPTRELALQIHEEVTKFT 354 Query: 181 SYSRT-RSTCIYGGA 222 + RS C GG+ Sbjct: 355 EADTSIRSVCCTGGS 369
>DDX23_PONPY (Q5RC67) Probable ATP-dependent RNA helicase DDX23 (EC 3.6.1.-)| (DEAD box protein 23) Length = 820 Score = 72.0 bits (175), Expect = 1e-12 Identities = 38/76 (50%), Positives = 51/76 (67%), Gaps = 4/76 (5%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQP---RLEQGD-GPIVLILAPTRELAVQIQAEAT 171 D+IG+AETGSGKT ++++P LV + P R+E+ D GP +ILAPTRELA QI+ E Sbjct: 430 DIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETI 489 Query: 172 KFGSYSRTRSTCIYGG 219 KFG R+ + GG Sbjct: 490 KFGKPLGIRTVAVIGG 505 Score = 29.6 bits (65), Expect = 7.2 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = +2 Query: 203 HVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 H + R++ L+ K G I+ ATDVA RG+ Sbjct: 695 HGGKGQEQREFALSNLKAGAKDILVATDVAGRGI 728
>DDX23_HUMAN (Q9BUQ8) Probable ATP-dependent RNA helicase DDX23 (EC 3.6.1.-)| (DEAD box protein 23) (100 kDa U5 snRNP-specific protein) (U5-100kD) (PRP28 homolog) Length = 820 Score = 72.0 bits (175), Expect = 1e-12 Identities = 38/76 (50%), Positives = 51/76 (67%), Gaps = 4/76 (5%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQP---RLEQGD-GPIVLILAPTRELAVQIQAEAT 171 D+IG+AETGSGKT ++++P LV + P R+E+ D GP +ILAPTRELA QI+ E Sbjct: 430 DIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETI 489 Query: 172 KFGSYSRTRSTCIYGG 219 KFG R+ + GG Sbjct: 490 KFGKPLGIRTVAVIGG 505 Score = 29.6 bits (65), Expect = 7.2 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = +2 Query: 203 HVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 H + R++ L+ K G I+ ATDVA RG+ Sbjct: 695 HGGKGQEQREFALSNLKAGAKDILVATDVAGRGI 728
>PRP5_CRYNE (Q5KME7) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 1072 Score = 71.2 bits (173), Expect = 2e-12 Identities = 35/73 (47%), Positives = 49/73 (67%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DVIGIA+TGSGKT++++LP L HV Q + +GPI ++++PTRELA QI E F Sbjct: 442 DVIGIAKTGSGKTVAFLLPMLRHVRDQRPVSGSEGPIAVVMSPTRELASQIYKECQPFLK 501 Query: 184 YSRTRSTCIYGGA 222 R++C GG+ Sbjct: 502 VLNIRASCCVGGS 514 Score = 34.7 bits (78), Expect = 0.22 Identities = 16/26 (61%), Positives = 18/26 (69%) Frame = +2 Query: 227 RDYVLAEFKNGKSPIMAATDVAARGL 304 RD + FKNG PI+ AT VAARGL Sbjct: 695 RDEAIKNFKNGDVPIIVATSVAARGL 720
>PRP5_ASHGO (Q754U8) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 816 Score = 70.1 bits (170), Expect = 5e-12 Identities = 42/75 (56%), Positives = 53/75 (70%), Gaps = 2/75 (2%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGD-GPIVLILAPTRELAVQIQAEATKFG 180 DVIGI++TGSGKT+S+ILP L + AQ L + GP+ LIL+PTRELA+QI E TKF Sbjct: 276 DVIGISKTGSGKTVSFILPLLRQIKAQRPLGGDETGPLGLILSPTRELALQIHEEVTKFT 335 Query: 181 SYSRT-RSTCIYGGA 222 S + RS C GG+ Sbjct: 336 SGDPSIRSLCCTGGS 350
>PRP28_ASPOR (Q2UH00) Pre-mRNA splicing ATP-dependent RNA helicase prp28 (EC| 3.6.1.-) Length = 803 Score = 69.7 bits (169), Expect = 6e-12 Identities = 37/77 (48%), Positives = 49/77 (63%), Gaps = 5/77 (6%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQ-----GDGPIVLILAPTRELAVQIQAEA 168 D+IG+A TGSGKT S++LP LV++ PR+++ DGP ++LAPTRELA QI+ EA Sbjct: 406 DLIGVAVTGSGKTASFLLPLLVYIAELPRIDEFEWRKNDGPYAIVLAPTRELAQQIEIEA 465 Query: 169 TKFGSYSRTRSTCIYGG 219 KF I GG Sbjct: 466 KKFTEPLGFNVVSIVGG 482 Score = 32.7 bits (73), Expect = 0.85 Identities = 13/34 (38%), Positives = 22/34 (64%) Frame = +2 Query: 203 HVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 H S + R+ LA +NG++ ++ ATD+A RG+ Sbjct: 673 HGSKTQEQREAALASVRNGQTDVLVATDLAGRGI 706
>PRP28_ASPFU (Q4WPE9) Pre-mRNA splicing ATP-dependent RNA helicase prp28 (EC| 3.6.1.-) Length = 796 Score = 69.7 bits (169), Expect = 6e-12 Identities = 37/77 (48%), Positives = 49/77 (63%), Gaps = 5/77 (6%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQ-----GDGPIVLILAPTRELAVQIQAEA 168 D+IG+A TGSGKT S++LP LV++ PR+++ DGP ++LAPTRELA QI+ EA Sbjct: 403 DLIGVAVTGSGKTASFLLPLLVYISELPRIDEFEWRKNDGPYAIVLAPTRELAQQIEIEA 462 Query: 169 TKFGSYSRTRSTCIYGG 219 KF I GG Sbjct: 463 RKFTQPLGFNVVSIVGG 479 Score = 32.3 bits (72), Expect = 1.1 Identities = 13/34 (38%), Positives = 21/34 (61%) Frame = +2 Query: 203 HVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 H S + R+ LA +NG + ++ ATD+A RG+ Sbjct: 665 HGSKTQEQREAALASVRNGSTDVLVATDLAGRGI 698
>DBP3_ASPFU (Q4WH83) ATP-dependent RNA helicase dbp3 (EC 3.6.1.-)| Length = 503 Score = 69.3 bits (168), Expect = 8e-12 Identities = 37/76 (48%), Positives = 52/76 (68%), Gaps = 1/76 (1%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDG-PIVLILAPTRELAVQIQAEATKFG 180 DVIGIAETGSGKTL++ LP + + ++++ P +I++PTRELA+QI + +KFG Sbjct: 124 DVIGIAETGSGKTLAFGLPCIKKILDSGKVKRKHARPAAVIISPTRELAMQIYDQLSKFG 183 Query: 181 SYSRTRSTCIYGGAPK 228 + R TCIYGG K Sbjct: 184 ASVDIRVTCIYGGVKK 199 Score = 32.3 bits (72), Expect = 1.1 Identities = 16/34 (47%), Positives = 20/34 (58%) Frame = +2 Query: 203 HVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 H +H R L FK G + ++ ATDVAARGL Sbjct: 369 HGDLNQHERFKSLEAFKTGSATVLVATDVAARGL 402
>PRP28_GIBZE (Q4I7F9) Pre-mRNA splicing ATP-dependent RNA helicase PRP28 (EC| 3.6.1.-) Length = 721 Score = 68.2 bits (165), Expect = 2e-11 Identities = 37/75 (49%), Positives = 48/75 (64%), Gaps = 3/75 (4%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQ---GDGPIVLILAPTRELAVQIQAEATK 174 D+IG+A TGSGKT +++LP LV++ P L++ DGP LI+APTREL QI+ EA K Sbjct: 327 DLIGVAVTGSGKTAAFLLPLLVYISDLPPLDEINKHDGPYALIMAPTRELVQQIETEARK 386 Query: 175 FGSYSRTRSTCIYGG 219 F R I GG Sbjct: 387 FAGPLGFRVVSIVGG 401
>PRP5_NEUCR (Q7SH33) Pre-mRNA-processing ATP-dependent RNA helicase prp-5 (EC| 3.6.1.-) Length = 1194 Score = 67.4 bits (163), Expect = 3e-11 Identities = 34/72 (47%), Positives = 44/72 (61%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DVIG+A+TGSGKT+++ LP L HV Q + DG I LI+ PTREL QI ++ F Sbjct: 600 DVIGVAKTGSGKTMAFALPMLRHVKDQDPVTGDDGAIALIMTPTRELCTQIYSDLQPFAK 659 Query: 184 YSRTRSTCIYGG 219 + R YGG Sbjct: 660 ALKLRVVAAYGG 671 Score = 31.6 bits (70), Expect = 1.9 Identities = 13/26 (50%), Positives = 19/26 (73%) Frame = +2 Query: 227 RDYVLAEFKNGKSPIMAATDVAARGL 304 R+ +++FK G PI+ AT +AARGL Sbjct: 850 RNSTISDFKKGVCPILIATSIAARGL 875
>PRP28_YARLI (Q6C024) Pre-mRNA splicing ATP-dependent RNA helicase PRP28 (EC| 3.6.1.-) Length = 575 Score = 67.4 bits (163), Expect = 3e-11 Identities = 36/75 (48%), Positives = 52/75 (69%), Gaps = 3/75 (4%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQG---DGPIVLILAPTRELAVQIQAEATK 174 DVIG+AETGSGKT S+++P + ++ P+L++ +GP LILAPTRELA+QI+ EA K Sbjct: 202 DVIGVAETGSGKTASFLIPLISYICELPKLDERSKVNGPYGLILAPTRELAMQIKDEAVK 261 Query: 175 FGSYSRTRSTCIYGG 219 F + + + GG Sbjct: 262 FCAPLGFKVVSVVGG 276 Score = 29.3 bits (64), Expect = 9.4 Identities = 15/51 (29%), Positives = 27/51 (52%) Frame = +2 Query: 203 HVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGLGMVTCLNIRIML*FQLS 355 H + R+ + K G ++ ATDVA RGL + N+ +++ FQ++ Sbjct: 462 HGGKQQEQREQAVQHLKRGAVDVLVATDVAGRGLDIP---NVSLVVNFQMA 509
>PRP28_NEUCR (Q7SEL0) Pre-mRNA splicing ATP-dependent RNA helicase prp-28 (EC| 3.6.1.-) Length = 728 Score = 67.4 bits (163), Expect = 3e-11 Identities = 37/75 (49%), Positives = 48/75 (64%), Gaps = 3/75 (4%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQ---GDGPIVLILAPTRELAVQIQAEATK 174 D+IG+A TGSGKT +++LP LV++ P L + DGP LILAPTREL QI++EA K Sbjct: 332 DLIGVAVTGSGKTAAFLLPLLVYISELPPLTEYNKNDGPYALILAPTRELVQQIESEAKK 391 Query: 175 FGSYSRTRSTCIYGG 219 F + I GG Sbjct: 392 FATPLGFTVVSIVGG 406 Score = 33.5 bits (75), Expect = 0.50 Identities = 14/34 (41%), Positives = 22/34 (64%) Frame = +2 Query: 203 HVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 H S + R+ LA +NG++ I+ ATD+A RG+ Sbjct: 597 HGSKTQEQREAALASLRNGQTDILVATDLAGRGI 630
>PRP28_SCHPO (Q9Y7T7) Pre-mRNA splicing ATP-dependent RNA helicase prp28 (EC| 3.6.1.-) Length = 662 Score = 67.4 bits (163), Expect = 3e-11 Identities = 35/75 (46%), Positives = 47/75 (62%), Gaps = 3/75 (4%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGD---GPIVLILAPTRELAVQIQAEATK 174 D+IGIAETGSGKT ++I+P ++ + P L + + GP ++LAPTRELA QIQ E K Sbjct: 288 DLIGIAETGSGKTAAFIIPLIIAISKLPPLTESNMHLGPYAVVLAPTRELAQQIQVEGNK 347 Query: 175 FGSYSRTRSTCIYGG 219 F R + GG Sbjct: 348 FAEPLGFRCVSVVGG 362
>PL10_MOUSE (P16381) Putative ATP-dependent RNA helicase Pl10 (EC 3.6.1.-)| Length = 660 Score = 65.1 bits (157), Expect = 2e-10 Identities = 46/120 (38%), Positives = 60/120 (50%), Gaps = 13/120 (10%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHV-----GAQPRLEQGDG--------PIVLILAPTREL 144 D++ A+TGSGKT +++LP L + G R + +G PI L+LAPTREL Sbjct: 218 DLMACAQTGSGKTAAFLLPILSQIYTDGPGEALRAMKENGKYGRRKQYPISLVLAPTREL 277 Query: 145 AVQIQAEATKFGSYSRTRSTCIYGGAPKGLCSGRV*EWEESYNGCHRCSGTWSWYGDLFE 324 AVQI EA KF SR R +YGGA G + + GCH T D+ E Sbjct: 278 AVQIYEEARKFSYRSRVRPCVVYGGADIGQ------QIRDLERGCHLLVATPGRLVDMME 331 Score = 35.8 bits (81), Expect = 0.10 Identities = 19/42 (45%), Positives = 29/42 (69%) Frame = +2 Query: 227 RDYVLAEFKNGKSPIMAATDVAARGLGMVTCLNIRIML*FQL 352 R+ L +F++GKSPI+ AT VAARGL + N++ ++ F L Sbjct: 479 REEALHQFRSGKSPILVATAVAARGLDI---SNVKHVINFDL 517
>DDX3X_MOUSE (Q62167) ATP-dependent RNA helicase DDX3X (EC 3.6.1.-) (DEAD box| protein 3, X-chromosomal) (DEAD box RNA helicase DEAD3) (mDEAD3) (Embryonic RNA helicase) (D1Pas1-related sequence 2) Length = 661 Score = 65.1 bits (157), Expect = 2e-10 Identities = 46/120 (38%), Positives = 60/120 (50%), Gaps = 13/120 (10%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHV-----GAQPRLEQGDG--------PIVLILAPTREL 144 D++ A+TGSGKT +++LP L + G R + +G PI L+LAPTREL Sbjct: 218 DLMACAQTGSGKTAAFLLPILSQIYADGPGEALRAMKENGRYGRRKQYPISLVLAPTREL 277 Query: 145 AVQIQAEATKFGSYSRTRSTCIYGGAPKGLCSGRV*EWEESYNGCHRCSGTWSWYGDLFE 324 AVQI EA KF SR R +YGGA G + + GCH T D+ E Sbjct: 278 AVQIYEEARKFSYRSRVRPCVVYGGAEIGQ------QIRDLERGCHLLVATPGRLVDMME 331 Score = 35.8 bits (81), Expect = 0.10 Identities = 19/42 (45%), Positives = 29/42 (69%) Frame = +2 Query: 227 RDYVLAEFKNGKSPIMAATDVAARGLGMVTCLNIRIML*FQL 352 R+ L +F++GKSPI+ AT VAARGL + N++ ++ F L Sbjct: 479 REEALHQFRSGKSPILVATAVAARGLDI---SNVKHVINFDL 517
>DDX3X_HUMAN (O00571) ATP-dependent RNA helicase DDX3X (EC 3.6.1.-) (DEAD box| protein 3, X-chromosomal) (Helicase-like protein 2) (HLP2) (DEAD box, X isoform) Length = 661 Score = 65.1 bits (157), Expect = 2e-10 Identities = 46/120 (38%), Positives = 60/120 (50%), Gaps = 13/120 (10%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHV-----GAQPRLEQGDG--------PIVLILAPTREL 144 D++ A+TGSGKT +++LP L + G R + +G PI L+LAPTREL Sbjct: 218 DLMACAQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTREL 277 Query: 145 AVQIQAEATKFGSYSRTRSTCIYGGAPKGLCSGRV*EWEESYNGCHRCSGTWSWYGDLFE 324 AVQI EA KF SR R +YGGA G + + GCH T D+ E Sbjct: 278 AVQIYEEARKFSYRSRVRPCVVYGGADIGQ------QIRDLERGCHLLVATPGRLVDMME 331 Score = 35.8 bits (81), Expect = 0.10 Identities = 19/42 (45%), Positives = 29/42 (69%) Frame = +2 Query: 227 RDYVLAEFKNGKSPIMAATDVAARGLGMVTCLNIRIML*FQL 352 R+ L +F++GKSPI+ AT VAARGL + N++ ++ F L Sbjct: 479 REEALHQFRSGKSPILVATAVAARGLDI---SNVKHVINFDL 517
>DBP3_EMENI (Q5AWA6) ATP-dependent RNA helicase dbp3 (EC 3.6.1.-)| Length = 498 Score = 64.7 bits (156), Expect = 2e-10 Identities = 34/75 (45%), Positives = 47/75 (62%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DVIGIAETGSGKTL++ LP L V ++ P+ ++++PTRELA+QI + KF Sbjct: 112 DVIGIAETGSGKTLAFGLPCLKKVLDLKTKQKSCRPLAVVISPTRELAMQIYDQLVKFAE 171 Query: 184 YSRTRSTCIYGGAPK 228 + CI+GG K Sbjct: 172 KVDIQVACIFGGVKK 186 Score = 30.0 bits (66), Expect = 5.5 Identities = 13/22 (59%), Positives = 17/22 (77%) Frame = +2 Query: 239 LAEFKNGKSPIMAATDVAARGL 304 L FK+G + ++ ATDVAARGL Sbjct: 366 LEAFKSGAATVLVATDVAARGL 387
>DDX3Y_PONPY (Q5RF43) ATP-dependent RNA helicase DDX3Y (EC 3.6.1.-) (DEAD box| protein 3, Y-chromosomal) Length = 658 Score = 63.9 bits (154), Expect = 3e-10 Identities = 45/120 (37%), Positives = 60/120 (50%), Gaps = 13/120 (10%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHV-----GAQPRLEQGDG--------PIVLILAPTREL 144 D++ A+TGSGKT +++LP L + G + + +G PI L+LAPTREL Sbjct: 217 DLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTREL 276 Query: 145 AVQIQAEATKFGSYSRTRSTCIYGGAPKGLCSGRV*EWEESYNGCHRCSGTWSWYGDLFE 324 AVQI EA KF SR R +YGGA G + + GCH T D+ E Sbjct: 277 AVQIYEEARKFSYRSRVRPCVVYGGADIGQ------QIRDLERGCHLLVATPGRLVDMME 330 Score = 37.0 bits (84), Expect = 0.045 Identities = 20/42 (47%), Positives = 29/42 (69%) Frame = +2 Query: 227 RDYVLAEFKNGKSPIMAATDVAARGLGMVTCLNIRIML*FQL 352 R+ L +F++GKSPI+ AT VAARGL + N+R ++ F L Sbjct: 478 REEALHQFRSGKSPILVATAVAARGLDI---SNVRHVINFDL 516
>DDX3Y_PANTR (Q6GVM6) ATP-dependent RNA helicase DDX3Y (EC 3.6.1.-) (DEAD box| protein 3, Y-chromosomal) Length = 660 Score = 63.9 bits (154), Expect = 3e-10 Identities = 45/120 (37%), Positives = 60/120 (50%), Gaps = 13/120 (10%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHV-----GAQPRLEQGDG--------PIVLILAPTREL 144 D++ A+TGSGKT +++LP L + G + + +G PI L+LAPTREL Sbjct: 217 DLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTREL 276 Query: 145 AVQIQAEATKFGSYSRTRSTCIYGGAPKGLCSGRV*EWEESYNGCHRCSGTWSWYGDLFE 324 AVQI EA KF SR R +YGGA G + + GCH T D+ E Sbjct: 277 AVQIYEEARKFSYRSRVRPCVVYGGADIGQ------QIRDLERGCHLLVATPGRLVDMME 330 Score = 37.0 bits (84), Expect = 0.045 Identities = 20/42 (47%), Positives = 29/42 (69%) Frame = +2 Query: 227 RDYVLAEFKNGKSPIMAATDVAARGLGMVTCLNIRIML*FQL 352 R+ L +F++GKSPI+ AT VAARGL + N+R ++ F L Sbjct: 478 REEALHQFRSGKSPILVATAVAARGLDI---SNVRHVINFDL 516
>DDX3Y_HUMAN (O15523) ATP-dependent RNA helicase DDX3Y (EC 3.6.1.-) (DEAD box| protein 3, Y-chromosomal) Length = 660 Score = 63.9 bits (154), Expect = 3e-10 Identities = 45/120 (37%), Positives = 60/120 (50%), Gaps = 13/120 (10%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHV-----GAQPRLEQGDG--------PIVLILAPTREL 144 D++ A+TGSGKT +++LP L + G + + +G PI L+LAPTREL Sbjct: 217 DLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTREL 276 Query: 145 AVQIQAEATKFGSYSRTRSTCIYGGAPKGLCSGRV*EWEESYNGCHRCSGTWSWYGDLFE 324 AVQI EA KF SR R +YGGA G + + GCH T D+ E Sbjct: 277 AVQIYEEARKFSYRSRVRPCVVYGGADIGQ------QIRDLERGCHLLVATPGRLVDMME 330 Score = 37.0 bits (84), Expect = 0.045 Identities = 20/42 (47%), Positives = 29/42 (69%) Frame = +2 Query: 227 RDYVLAEFKNGKSPIMAATDVAARGLGMVTCLNIRIML*FQL 352 R+ L +F++GKSPI+ AT VAARGL + N+R ++ F L Sbjct: 478 REEALHQFRSGKSPILVATAVAARGLDI---SNVRHVINFDL 516
>DBP3_YARLI (Q6C9P3) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 532 Score = 63.9 bits (154), Expect = 3e-10 Identities = 32/75 (42%), Positives = 46/75 (61%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 D++G+AETGSGKT ++ +P L HV + G G VL+++PTRELA+QI + Sbjct: 163 DMVGVAETGSGKTFTFAVPALEHVLST---SGGKGVRVLVVSPTRELAMQIYDNIKELCD 219 Query: 184 YSRTRSTCIYGGAPK 228 + C+YGG PK Sbjct: 220 VVGLHAVCVYGGVPK 234 Score = 33.1 bits (74), Expect = 0.65 Identities = 17/34 (50%), Positives = 20/34 (58%) Frame = +2 Query: 203 HVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 H + R L EFK G+ I+ ATDVAARGL Sbjct: 399 HGDLSQQQRTKALDEFKKGEKNILLATDVAARGL 432
>DBP3_ASPOR (Q2UMH8) ATP-dependent RNA helicase dbp3 (EC 3.6.1.-)| Length = 498 Score = 63.9 bits (154), Expect = 3e-10 Identities = 35/76 (46%), Positives = 47/76 (61%), Gaps = 1/76 (1%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGD-GPIVLILAPTRELAVQIQAEATKFG 180 DVIGIAETGSGKTL++ LP L + +Q P+ +I++PTRELA+QI + KF Sbjct: 119 DVIGIAETGSGKTLAFGLPCLKKIQDSAMTKQKPYRPLAVIISPTRELAMQIYDQLLKFS 178 Query: 181 SYSRTRSTCIYGGAPK 228 R C++GG K Sbjct: 179 GSVGVRVACVFGGVRK 194 Score = 29.3 bits (64), Expect = 9.4 Identities = 13/22 (59%), Positives = 16/22 (72%) Frame = +2 Query: 239 LAEFKNGKSPIMAATDVAARGL 304 L FK G + ++ ATDVAARGL Sbjct: 376 LDAFKTGAATVLVATDVAARGL 397
>AN3_XENLA (P24346) Putative ATP-dependent RNA helicase an3 (EC 3.6.1.-)| Length = 697 Score = 63.5 bits (153), Expect = 4e-10 Identities = 44/120 (36%), Positives = 59/120 (49%), Gaps = 13/120 (10%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHV------GAQPRLEQGDG-------PIVLILAPTREL 144 D++ A+TGSGKT +++LP L + A L++ P+ L+LAPTREL Sbjct: 260 DLMACAQTGSGKTAAFLLPILSQIYADGPGDAMKHLQENGRYGRRKQFPLSLVLAPTREL 319 Query: 145 AVQIQAEATKFGSYSRTRSTCIYGGAPKGLCSGRV*EWEESYNGCHRCSGTWSWYGDLFE 324 AVQI EA KF SR R +YGGA G + + GCH T D+ E Sbjct: 320 AVQIYEEARKFAYRSRVRPCVVYGGADIGQ------QIRDLERGCHLLVATPGRLVDMME 373 Score = 35.8 bits (81), Expect = 0.10 Identities = 19/42 (45%), Positives = 29/42 (69%) Frame = +2 Query: 227 RDYVLAEFKNGKSPIMAATDVAARGLGMVTCLNIRIML*FQL 352 R+ L +F++GKSPI+ AT VAARGL + N++ ++ F L Sbjct: 521 REEALHQFRSGKSPILVATAVAARGLDI---SNVKHVINFDL 559
>DBP3_CRYNE (Q5KHB7) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 605 Score = 63.5 bits (153), Expect = 4e-10 Identities = 36/83 (43%), Positives = 51/83 (61%), Gaps = 8/83 (9%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRL---EQGDGPI-----VLILAPTRELAVQIQ 159 DV+GIAETGSGKTL++ +PG+ + P + ++G G + +L+LAPTRELA Q Sbjct: 212 DVVGIAETGSGKTLAFGVPGINLLSQLPPVTGSKKGRGQVPGQIQMLVLAPTRELAQQSH 271 Query: 160 AEATKFGSYSRTRSTCIYGGAPK 228 + FG +S CI+GG K Sbjct: 272 EHLSAFGEQVGLKSVCIFGGVGK 294 Score = 33.1 bits (74), Expect = 0.65 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 6/56 (10%) Frame = +2 Query: 155 YRQKLQSLDHTRELEA------HVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 Y+++ Q L++T H + R L FK G+ ++ ATDVAARGL Sbjct: 448 YKKEAQRLEYTIRRAGYAVGALHGDMTQEARFKALEAFKTGQQNVLVATDVAARGL 503
>RHLB_XANAC (Q8PFZ3) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 571 Score = 63.5 bits (153), Expect = 4e-10 Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 2/75 (2%) Frame = +1 Query: 1 GDVIGIAETGSGKTLSYILPGLVHVGAQPRL--EQGDGPIVLILAPTRELAVQIQAEATK 174 GDV G A+TG+GKTL++++ + + +P L + + P LILAPTRELA+QI +A K Sbjct: 47 GDVAGQAQTGTGKTLAFLVAVMNRLLIRPALADRKPEDPRALILAPTRELAIQIHKDAVK 106 Query: 175 FGSYSRTRSTCIYGG 219 FG+ R +YGG Sbjct: 107 FGADLGLRFALVYGG 121 Score = 30.4 bits (67), Expect = 4.2 Identities = 14/26 (53%), Positives = 19/26 (73%) Frame = +2 Query: 227 RDYVLAEFKNGKSPIMAATDVAARGL 304 R+ +L F+ G+ I+ ATDVAARGL Sbjct: 296 RESLLNRFQKGQLEILVATDVAARGL 321
>RHLB_XANCP (Q8P4D4) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 573 Score = 63.5 bits (153), Expect = 4e-10 Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 2/75 (2%) Frame = +1 Query: 1 GDVIGIAETGSGKTLSYILPGLVHVGAQPRL--EQGDGPIVLILAPTRELAVQIQAEATK 174 GDV G A+TG+GKTL++++ + + +P L + + P LILAPTRELA+QI +A K Sbjct: 47 GDVAGQAQTGTGKTLAFLVAVMNRLLIRPALADRKPEDPRALILAPTRELAIQIHKDAVK 106 Query: 175 FGSYSRTRSTCIYGG 219 FG+ R +YGG Sbjct: 107 FGADLGLRFALVYGG 121 Score = 30.4 bits (67), Expect = 4.2 Identities = 14/26 (53%), Positives = 19/26 (73%) Frame = +2 Query: 227 RDYVLAEFKNGKSPIMAATDVAARGL 304 R+ +L F+ G+ I+ ATDVAARGL Sbjct: 296 RESLLNRFQKGQLEILVATDVAARGL 321
>RHLB_XANOR (Q5GUR8) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 574 Score = 63.2 bits (152), Expect = 6e-10 Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 2/75 (2%) Frame = +1 Query: 1 GDVIGIAETGSGKTLSYILPGLVHVGAQPRL--EQGDGPIVLILAPTRELAVQIQAEATK 174 GDV G A+TG+GKTL++++ + + +P L + + P LILAPTRELA+QI +A K Sbjct: 47 GDVAGQAQTGTGKTLAFLVAVMNRLLNRPALADRKPEDPRALILAPTRELAIQIHKDAVK 106 Query: 175 FGSYSRTRSTCIYGG 219 FG+ R +YGG Sbjct: 107 FGADLGLRFALVYGG 121 Score = 30.4 bits (67), Expect = 4.2 Identities = 14/26 (53%), Positives = 19/26 (73%) Frame = +2 Query: 227 RDYVLAEFKNGKSPIMAATDVAARGL 304 R+ +L F+ G+ I+ ATDVAARGL Sbjct: 296 RESLLNRFQKGQLEILVATDVAARGL 321
>PRP28_CRYNE (Q5KNF8) Pre-mRNA splicing ATP-dependent RNA helicase PRP28 (EC| 3.6.1.-) Length = 738 Score = 63.2 bits (152), Expect = 6e-10 Identities = 33/75 (44%), Positives = 47/75 (62%), Gaps = 3/75 (4%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGD---GPIVLILAPTRELAVQIQAEATK 174 D+IG+A+TGSGKT ++++P L ++G P L + GP LI+APTRELA QI+ E + Sbjct: 354 DLIGVAKTGSGKTAAFVIPMLDYIGHLPPLNDDNRHLGPYALIMAPTRELAQQIETETRR 413 Query: 175 FGSYSRTRSTCIYGG 219 F + I GG Sbjct: 414 FALPLGYKCVSIVGG 428
>DBP3_USTMA (Q4PDT1) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 585 Score = 63.2 bits (152), Expect = 6e-10 Identities = 34/82 (41%), Positives = 47/82 (57%), Gaps = 7/82 (8%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRL-------EQGDGPIVLILAPTRELAVQIQA 162 DV+GIAETGSGKT ++ LP L H+ + ++ +G VL++APTRELA+Q + Sbjct: 198 DVVGIAETGSGKTFAFGLPALQHLVTKHKVLDSGKKKAKGAQVNVLVIAPTRELAIQTEE 257 Query: 163 EATKFGSYSRTRSTCIYGGAPK 228 K G C+YGG K Sbjct: 258 NMAKLGKSMGIGMICLYGGVSK 279 Score = 31.6 bits (70), Expect = 1.9 Identities = 13/22 (59%), Positives = 18/22 (81%) Frame = +2 Query: 239 LAEFKNGKSPIMAATDVAARGL 304 L FK+ ++P++ ATDVAARGL Sbjct: 463 LERFKSAETPLLVATDVAARGL 484
>DDX3Y_MOUSE (Q62095) ATP-dependent RNA helicase DDX3Y (EC 3.6.1.-) (DEAD box| protein 3, Y-chromosomal) (DEAD-box RNA helicase DEAD2) (mDEAD2) (D1Pas1-related sequence 1) Length = 658 Score = 63.2 bits (152), Expect = 6e-10 Identities = 45/120 (37%), Positives = 60/120 (50%), Gaps = 13/120 (10%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHV-----GAQPRLEQGDG--------PIVLILAPTREL 144 D++ A+TGSGKT +++LP L + G + + +G PI L+LAPTREL Sbjct: 218 DLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAMKENGRYGRRKQYPISLVLAPTREL 277 Query: 145 AVQIQAEATKFGSYSRTRSTCIYGGAPKGLCSGRV*EWEESYNGCHRCSGTWSWYGDLFE 324 AVQI EA KF SR R +YGGA V + + GCH T D+ E Sbjct: 278 AVQIYEEARKFSYRSRVRPCVVYGGA------DTVQQIRDLERGCHLLVATPGRLVDMME 331 Score = 36.2 bits (82), Expect = 0.077 Identities = 24/72 (33%), Positives = 39/72 (54%) Frame = +2 Query: 137 ENWLFKYRQKLQSLDHTRELEAHVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGLGMVT 316 EN+LF+ R S+ H + R+ L +F++G+ PI+ AT VAARGL + Sbjct: 457 ENFLFQERYACTSI--------HGDRSQKDREEALHQFRSGRKPILVATAVAARGLDI-- 506 Query: 317 CLNIRIML*FQL 352 N++ ++ F L Sbjct: 507 -SNVKHVINFDL 517
>PRP28_KLULA (Q6CT49) Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 (EC| 3.6.1.-) Length = 539 Score = 61.2 bits (147), Expect = 2e-09 Identities = 32/57 (56%), Positives = 41/57 (71%), Gaps = 3/57 (5%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLE---QGDGPIVLILAPTRELAVQIQAE 165 D IG+A TGSGKTL+++LP L+ + P L + DGP+ L+LAPTRELA QIQ E Sbjct: 177 DFIGVASTGSGKTLAFLLPILIKLHGIPPLNSITKHDGPLALVLAPTRELAQQIQHE 233 Score = 34.3 bits (77), Expect = 0.29 Identities = 25/73 (34%), Positives = 39/73 (53%) Frame = +2 Query: 140 NWLFKYRQKLQSLDHTRELEAHVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGLGMVTC 319 +WLF KL+ R H S + R++ L+ +NGK I+ ATDVA RG+ + Sbjct: 402 DWLF---DKLREA-RFRATTLHGSKSQEQREHSLSLLRNGKVDILIATDVAGRGID-IPN 456 Query: 320 LNIRIML*FQLSF 358 +++ + L F SF Sbjct: 457 VSLVVNLQFPKSF 469
>SRMB_HAEIN (P44701) ATP-dependent RNA helicase srmB homolog (EC 3.6.1.-)| Length = 439 Score = 60.5 bits (145), Expect = 4e-09 Identities = 30/72 (41%), Positives = 45/72 (62%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DV+G A TG+GKT +++LP L H+ PR + G P +L+L PTRELA+Q+ +A + Sbjct: 43 DVLGSAPTGTGKTAAFLLPALQHLLDYPRRKPGP-PRILVLTPTRELAMQVAEQAEELAQ 101 Query: 184 YSRTRSTCIYGG 219 ++ I GG Sbjct: 102 FTHLNIATITGG 113
>SRMB_ECOLI (P21507) ATP-dependent RNA helicase srmB (EC 3.6.1.-)| Length = 444 Score = 60.1 bits (144), Expect = 5e-09 Identities = 32/72 (44%), Positives = 44/72 (61%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DV+G A TG+GKT +Y+LP L H+ PR + G P +LIL PTRELA+Q+ A + Sbjct: 43 DVLGSAPTGTGKTAAYLLPALQHLLDFPRKKSGP-PRILILTPTRELAMQVSDHARELAK 101 Query: 184 YSRTRSTCIYGG 219 ++ I GG Sbjct: 102 HTHLDIATITGG 113
>DBP3_NEUCR (Q7S5R1) ATP-dependent RNA helicase dbp-3 (EC 3.6.1.-)| Length = 614 Score = 59.7 bits (143), Expect = 6e-09 Identities = 32/80 (40%), Positives = 50/80 (62%), Gaps = 5/80 (6%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPR-----LEQGDGPIVLILAPTRELAVQIQAEA 168 DVIGIAETGSGKT+++ LP + + ++P+ ++ P +I++PTRELA+Q A Sbjct: 218 DVIGIAETGSGKTMAFSLPCVESLASRPKPKFNSRDRTAHPRAVIVSPTRELAMQTHAAL 277 Query: 169 TKFGSYSRTRSTCIYGGAPK 228 + S + CI+GG+ K Sbjct: 278 SGLASLVGLSAVCIFGGSDK 297 Score = 30.0 bits (66), Expect = 5.5 Identities = 13/22 (59%), Positives = 17/22 (77%) Frame = +2 Query: 239 LAEFKNGKSPIMAATDVAARGL 304 L FK+G + ++ ATDVAARGL Sbjct: 493 LEAFKSGTTTVLVATDVAARGL 514
>DBP3_SCHPO (Q10202) ATP-dependent RNA helicase dbp3 (EC 3.6.1.-)| Length = 578 Score = 59.7 bits (143), Expect = 6e-09 Identities = 30/75 (40%), Positives = 46/75 (61%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DV+GIAETGSGKT+++ +P L ++ + P VL+++PTRELA+Q Sbjct: 204 DVVGIAETGSGKTVAFGIPALQYLNGLS--DNKSVPRVLVVSPTRELAIQTYENLNSLIQ 261 Query: 184 YSRTRSTCIYGGAPK 228 + ++ +YGGAPK Sbjct: 262 GTNLKAVVVYGGAPK 276 Score = 35.8 bits (81), Expect = 0.10 Identities = 17/34 (50%), Positives = 22/34 (64%) Frame = +2 Query: 203 HVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 H + R L +FK+GK P++ ATDVAARGL Sbjct: 447 HGDMSQGARLQALNDFKSGKCPVLVATDVAARGL 480
>RHLB_XYLFA (Q9PA24) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 543 Score = 59.7 bits (143), Expect = 6e-09 Identities = 33/74 (44%), Positives = 47/74 (63%), Gaps = 2/74 (2%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRL--EQGDGPIVLILAPTRELAVQIQAEATKF 177 D+ G A+TG+GKTL++++ + + ++P L + P LILAPTRELA+QI +A KF Sbjct: 48 DIAGQAQTGTGKTLAFLVVVVNRLLSRPGLVNRNPEDPRALILAPTRELAIQIYNDAVKF 107 Query: 178 GSYSRTRSTCIYGG 219 G R IYGG Sbjct: 108 GGNLGLRFALIYGG 121 Score = 30.4 bits (67), Expect = 4.2 Identities = 14/26 (53%), Positives = 19/26 (73%) Frame = +2 Query: 227 RDYVLAEFKNGKSPIMAATDVAARGL 304 R+ +L F+ G+ I+ ATDVAARGL Sbjct: 296 RETLLNRFQKGQLEILVATDVAARGL 321
>PRP5_YARLI (Q6CCZ1) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 974 Score = 59.3 bits (142), Expect = 8e-09 Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 8/82 (9%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLE--------QGDGPIVLILAPTRELAVQIQ 159 DVI +A+TGSGKTL+++LP L H+ + +E P+ +I+ PTREL VQI Sbjct: 417 DVISVAKTGSGKTLAFLLPMLRHIKHRVGVETHTTTLSGASSHPLGVIITPTRELCVQIY 476 Query: 160 AEATKFGSYSRTRSTCIYGGAP 225 + F + + C YGG+P Sbjct: 477 RDLRPFLAALELTAVCAYGGSP 498 Score = 31.2 bits (69), Expect = 2.5 Identities = 15/37 (40%), Positives = 22/37 (59%) Frame = +2 Query: 194 LEAHVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 L H + RD +++FK+G ++ AT VAARGL Sbjct: 692 LSIHGGKEQADRDQAISDFKSGLVSVLIATSVAARGL 728
>DBP3_KLULA (Q6CT46) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 504 Score = 59.3 bits (142), Expect = 8e-09 Identities = 32/75 (42%), Positives = 44/75 (58%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DVIGIAETGSGKT ++ +P + ++ ++ VL+++PTRELA QI Sbjct: 131 DVIGIAETGSGKTFAFGVPAINNIVTSG--DKSSSVKVLVISPTRELASQIYDNLIVLTD 188 Query: 184 YSRTRSTCIYGGAPK 228 RS C+YGG PK Sbjct: 189 ACGLRSCCVYGGVPK 203 Score = 33.1 bits (74), Expect = 0.65 Identities = 17/34 (50%), Positives = 20/34 (58%) Frame = +2 Query: 203 HVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 H + R L EFK GK ++ ATDVAARGL Sbjct: 371 HGDLSQQQRTQALNEFKAGKCNLLLATDVAARGL 404
>RHLB_XYLFT (Q879Y6) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 543 Score = 59.3 bits (142), Expect = 8e-09 Identities = 33/74 (44%), Positives = 46/74 (62%), Gaps = 2/74 (2%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRL--EQGDGPIVLILAPTRELAVQIQAEATKF 177 D+ G A+TG+GKTL++++ + + + P L + P LILAPTRELA+QI +A KF Sbjct: 48 DIAGQAQTGTGKTLAFLVVVVNRLLSSPGLVNRNPEDPRALILAPTRELAIQIYNDAVKF 107 Query: 178 GSYSRTRSTCIYGG 219 G R IYGG Sbjct: 108 GGNLGLRFALIYGG 121 Score = 30.4 bits (67), Expect = 4.2 Identities = 14/26 (53%), Positives = 19/26 (73%) Frame = +2 Query: 227 RDYVLAEFKNGKSPIMAATDVAARGL 304 R+ +L F+ G+ I+ ATDVAARGL Sbjct: 296 RETLLNRFQKGQLEILVATDVAARGL 321
>DBP1_YEAST (P24784) ATP-dependent RNA helicase DBP1 (EC 3.6.1.-) (DEAD box| protein 1) (Helicase CA1) Length = 617 Score = 58.5 bits (140), Expect = 1e-08 Identities = 44/117 (37%), Positives = 53/117 (45%), Gaps = 10/117 (8%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILP---GLVHVGAQPRLEQGDG-------PIVLILAPTRELAVQ 153 D++ A+TGSGKT ++ P L G P E+ P L+LAPTRELA Q Sbjct: 193 DLMACAQTGSGKTGGFLFPLFTELFRSGPSPVPEKAQSFYSRKGYPSALVLAPTRELATQ 252 Query: 154 IQAEATKFGSYSRTRSTCIYGGAPKGLCSGRV*EWEESYNGCHRCSGTWSWYGDLFE 324 I EA KF S R +YGGAP G + E GC T DL E Sbjct: 253 IFEEARKFTYRSWVRPCVVYGGAPIGN------QMREVDRGCDLLVATPGRLNDLLE 303
>PRP28_YEAST (P23394) Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 (EC| 3.6.1.-) (Helicase CA8) Length = 588 Score = 58.5 bits (140), Expect = 1e-08 Identities = 31/61 (50%), Positives = 40/61 (65%), Gaps = 4/61 (6%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQP----RLEQGDGPIVLILAPTRELAVQIQAEAT 171 D +G+A TGSGKTL++++P L+ + P L+ DGP LILAPTREL QIQ E Sbjct: 216 DFLGVASTGSGKTLAFVIPILIKMSRSPPRPPSLKIIDGPKALILAPTRELVQQIQKETQ 275 Query: 172 K 174 K Sbjct: 276 K 276 Score = 37.0 bits (84), Expect = 0.045 Identities = 25/75 (33%), Positives = 40/75 (53%) Frame = +2 Query: 131 QQENWLFKYRQKLQSLDHTRELEAHVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGLGM 310 Q +WL +K Q + + H S + R++ L F+ K IM AT+VAARGL + Sbjct: 447 QTADWL---AEKFQKETNMKVTILHGSKSQEQREHSLQLFRTNKVQIMIATNVAARGLDI 503 Query: 311 VTCLNIRIML*FQLS 355 N+ +++ FQ+S Sbjct: 504 P---NVSLVVNFQIS 515
>DEAD_KLEPN (P33906) Cold-shock DEAD box protein A (EC 3.6.1.-) (ATP-dependent| RNA helicase deaD) Length = 642 Score = 58.5 bits (140), Expect = 1e-08 Identities = 32/73 (43%), Positives = 46/73 (63%), Gaps = 1/73 (1%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DV+G+A+TGSGKT ++ LP L ++ + R P +L+LAPTRELAVQ+ T+F Sbjct: 44 DVLGMAQTGSGKTAAFSLPLLNNIDPELR-----APQILVLAPTRELAVQVAEAMTEFSK 98 Query: 184 YSR-TRSTCIYGG 219 + R +YGG Sbjct: 99 HMRGVNVVALYGG 111 Score = 32.0 bits (71), Expect = 1.4 Identities = 15/27 (55%), Positives = 19/27 (70%) Frame = +2 Query: 224 LRDYVLAEFKNGKSPIMAATDVAARGL 304 LR+ L K+G+ I+ ATDVAARGL Sbjct: 282 LREQALERLKDGRLDILIATDVAARGL 308
>DBP3_GIBZE (Q4IJH1) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 581 Score = 58.5 bits (140), Expect = 1e-08 Identities = 29/75 (38%), Positives = 45/75 (60%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DVIG+AETGSGKT+++ LP + + A ++++PTRELA+Q + + Sbjct: 200 DVIGVAETGSGKTMAFALPCVEAISALKHKHTK----AVVVSPTRELAMQTYEQMASVAA 255 Query: 184 YSRTRSTCIYGGAPK 228 +R + C+YGGA K Sbjct: 256 LNRMKCVCLYGGASK 270 Score = 34.3 bits (77), Expect = 0.29 Identities = 16/34 (47%), Positives = 22/34 (64%) Frame = +2 Query: 203 HVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 H + R L FK+G++P++ ATDVAARGL Sbjct: 448 HGDLRQEQRTRSLEAFKSGQTPVLVATDVAARGL 481
>PRP28_CANGA (Q6FM43) Pre-mRNA splicing ATP-dependent RNA helicase PRP28 (EC| 3.6.1.-) Length = 582 Score = 58.2 bits (139), Expect = 2e-08 Identities = 30/61 (49%), Positives = 40/61 (65%), Gaps = 4/61 (6%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQP----RLEQGDGPIVLILAPTRELAVQIQAEAT 171 D++GIA TGSGKTL++ +P L + A P L+ DGP+ L+L PTRELA QI E Sbjct: 215 DILGIASTGSGKTLAFSIPILARLDALPARPVNLKTLDGPLALVLVPTRELAQQISQEIN 274 Query: 172 K 174 + Sbjct: 275 R 275 Score = 30.8 bits (68), Expect = 3.2 Identities = 18/63 (28%), Positives = 36/63 (57%) Frame = +2 Query: 167 LQSLDHTRELEAHVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGLGMVTCLNIRIML*F 346 L+ D + H S + R+ + + K+G + ++ AT+VAARGL + ++ +++ F Sbjct: 450 LRLSDRFNIVTLHGSKSQSQRESAIQKLKSGTANVLIATNVAARGLDIP---DVALVVNF 506 Query: 347 QLS 355 Q+S Sbjct: 507 QMS 509
>DDX4_HUMAN (Q9NQI0) Probable ATP-dependent RNA helicase DDX4 (EC 3.6.1.-)| (DEAD box protein 4) (VASA homolog) Length = 724 Score = 57.8 bits (138), Expect = 2e-08 Identities = 33/80 (41%), Positives = 46/80 (57%), Gaps = 4/80 (5%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVG----AQPRLEQGDGPIVLILAPTRELAVQIQAEAT 171 D++ A+TGSGKT +++LP L H+ R ++ P +I+APTREL QI EA Sbjct: 327 DLMACAQTGSGKTAAFLLPILAHMMHDGITASRFKELQEPECIIVAPTRELVNQIYLEAR 386 Query: 172 KFGSYSRTRSTCIYGGAPKG 231 KF + R+ IYGG G Sbjct: 387 KFSFGTCVRAVVIYGGTQLG 406 Score = 33.9 bits (76), Expect = 0.38 Identities = 15/34 (44%), Positives = 21/34 (61%) Frame = +2 Query: 203 HVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 H + R+ L +F+ GK P++ AT VAARGL Sbjct: 571 HGDREQREREQALGDFRFGKCPVLVATSVAARGL 604
>DBP4_CANAL (Q5AF95) ATP-dependent RNA helicase DBP4 (EC 3.6.1.-)| Length = 765 Score = 57.8 bits (138), Expect = 2e-08 Identities = 30/72 (41%), Positives = 47/72 (65%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 D++G A TGSGKTL++++P ++ + ++ + DG LI++PTRELAVQI TK G Sbjct: 87 DLMGTARTGSGKTLAFLIP-VIESLIRNKITEYDGLAALIVSPTRELAVQIFEVLTKIGK 145 Query: 184 YSRTRSTCIYGG 219 Y+ + + GG Sbjct: 146 YNTFSAGLVTGG 157
>DDX4_PIG (Q6GWX0) Probable ATP-dependent RNA helicase DDX4 (EC 3.6.1.-)| (DEAD box protein 4) (VASA homolog) (VASA-like protein) Length = 722 Score = 57.8 bits (138), Expect = 2e-08 Identities = 33/80 (41%), Positives = 46/80 (57%), Gaps = 4/80 (5%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVG----AQPRLEQGDGPIVLILAPTRELAVQIQAEAT 171 D++ A+TGSGKT +++LP L H+ R ++ P +I+APTREL QI EA Sbjct: 325 DLMACAQTGSGKTAAFLLPILAHMMHDGITASRFKELQEPECIIVAPTRELVNQIYLEAR 384 Query: 172 KFGSYSRTRSTCIYGGAPKG 231 KF + R+ IYGG G Sbjct: 385 KFSFGTCVRAVVIYGGTQLG 404 Score = 33.9 bits (76), Expect = 0.38 Identities = 15/34 (44%), Positives = 21/34 (61%) Frame = +2 Query: 203 HVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 H + R+ L +F+ GK P++ AT VAARGL Sbjct: 569 HGDREQREREQALGDFRFGKCPVLVATSVAARGL 602
>PRP28_DEBHA (Q6BLU9) Pre-mRNA splicing ATP-dependent RNA helicase PRP28 (EC| 3.6.1.-) Length = 580 Score = 57.4 bits (137), Expect = 3e-08 Identities = 34/81 (41%), Positives = 46/81 (56%), Gaps = 9/81 (11%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGA---------QPRLEQGDGPIVLILAPTRELAVQI 156 D++GIAETGSGKTL+++LP ++ + + + P+ LILAPTRELA+QI Sbjct: 194 DIVGIAETGSGKTLAFLLPLFSYILSVDSNYLLYEHQQESNFNKPLGLILAPTRELALQI 253 Query: 157 QAEATKFGSYSRTRSTCIYGG 219 EA FG I GG Sbjct: 254 TKEAKLFGDKLNLNVVTIIGG 274 Score = 34.7 bits (78), Expect = 0.22 Identities = 17/51 (33%), Positives = 31/51 (60%) Frame = +2 Query: 203 HVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGLGMVTCLNIRIML*FQLS 355 H S + R+ + F+ GK I+ ATDVAARG+ + N+ +++ +Q++ Sbjct: 468 HGSKSQEARERAIDSFREGKDKILIATDVAARGIDIP---NVSLVVNYQMT 515
>DDX4_RAT (Q64060) Probable ATP-dependent RNA helicase DDX4 (EC 3.6.1.-)| (DEAD box protein 4) (VASA homolog) (rVLG) Length = 713 Score = 57.0 bits (136), Expect = 4e-08 Identities = 33/80 (41%), Positives = 46/80 (57%), Gaps = 4/80 (5%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQ----PRLEQGDGPIVLILAPTRELAVQIQAEAT 171 D++ A+TGSGKT +++LP L H+ R ++ P +I+APTREL QI EA Sbjct: 312 DLMACAQTGSGKTAAFLLPILAHMMRDGITASRFKELQEPECIIVAPTRELINQIYLEAR 371 Query: 172 KFGSYSRTRSTCIYGGAPKG 231 KF + R+ IYGG G Sbjct: 372 KFSFGTCVRAVVIYGGTQFG 391 Score = 33.9 bits (76), Expect = 0.38 Identities = 15/34 (44%), Positives = 21/34 (61%) Frame = +2 Query: 203 HVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 H + R+ L +F+ GK P++ AT VAARGL Sbjct: 556 HGDREQREREQALGDFRCGKCPVLVATSVAARGL 589
>DDX4_MOUSE (Q61496) Probable ATP-dependent RNA helicase DDX4 (EC 3.6.1.-)| (DEAD box protein 4) (VASA homolog) (Mvh) Length = 702 Score = 57.0 bits (136), Expect = 4e-08 Identities = 33/80 (41%), Positives = 46/80 (57%), Gaps = 4/80 (5%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQ----PRLEQGDGPIVLILAPTRELAVQIQAEAT 171 D++ A+TGSGKT +++LP L H+ R ++ P +I+APTREL QI EA Sbjct: 300 DLMACAQTGSGKTAAFLLPILAHMMRDGITASRFKELQEPECIIVAPTRELINQIYLEAR 359 Query: 172 KFGSYSRTRSTCIYGGAPKG 231 KF + R+ IYGG G Sbjct: 360 KFSFGTCVRAVVIYGGTQFG 379 Score = 33.9 bits (76), Expect = 0.38 Identities = 15/34 (44%), Positives = 21/34 (61%) Frame = +2 Query: 203 HVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 H + R+ L +F+ GK P++ AT VAARGL Sbjct: 544 HGDREQREREQALGDFRCGKCPVLVATSVAARGL 577
>DEAD_SHIFL (P0A9P8) Cold-shock DEAD box protein A (EC 3.6.1.-) (ATP-dependent| RNA helicase deaD) Length = 628 Score = 57.0 bits (136), Expect = 4e-08 Identities = 33/73 (45%), Positives = 46/73 (63%), Gaps = 1/73 (1%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DV+G+A+TGSGKT ++ LP L ++ P L+ P +L+LAPTRELAVQ+ T F Sbjct: 44 DVLGMAQTGSGKTAAFSLPLLQNL--DPELK---APQILVLAPTRELAVQVAEAMTDFSK 98 Query: 184 YSR-TRSTCIYGG 219 + R +YGG Sbjct: 99 HMRGVNVVALYGG 111 Score = 32.0 bits (71), Expect = 1.4 Identities = 15/27 (55%), Positives = 19/27 (70%) Frame = +2 Query: 224 LRDYVLAEFKNGKSPIMAATDVAARGL 304 LR+ L K+G+ I+ ATDVAARGL Sbjct: 282 LREQTLERLKDGRLDILIATDVAARGL 308
>DEAD_ECOLI (P0A9P6) Cold-shock DEAD box protein A (EC 3.6.1.-) (ATP-dependent| RNA helicase deaD) Length = 628 Score = 57.0 bits (136), Expect = 4e-08 Identities = 33/73 (45%), Positives = 46/73 (63%), Gaps = 1/73 (1%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DV+G+A+TGSGKT ++ LP L ++ P L+ P +L+LAPTRELAVQ+ T F Sbjct: 44 DVLGMAQTGSGKTAAFSLPLLQNL--DPELK---APQILVLAPTRELAVQVAEAMTDFSK 98 Query: 184 YSR-TRSTCIYGG 219 + R +YGG Sbjct: 99 HMRGVNVVALYGG 111 Score = 32.0 bits (71), Expect = 1.4 Identities = 15/27 (55%), Positives = 19/27 (70%) Frame = +2 Query: 224 LRDYVLAEFKNGKSPIMAATDVAARGL 304 LR+ L K+G+ I+ ATDVAARGL Sbjct: 282 LREQTLERLKDGRLDILIATDVAARGL 308
>DEAD_ECOL6 (P0A9P7) Cold-shock DEAD box protein A (EC 3.6.1.-) (ATP-dependent| RNA helicase deaD) Length = 628 Score = 57.0 bits (136), Expect = 4e-08 Identities = 33/73 (45%), Positives = 46/73 (63%), Gaps = 1/73 (1%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DV+G+A+TGSGKT ++ LP L ++ P L+ P +L+LAPTRELAVQ+ T F Sbjct: 44 DVLGMAQTGSGKTAAFSLPLLQNL--DPELK---APQILVLAPTRELAVQVAEAMTDFSK 98 Query: 184 YSR-TRSTCIYGG 219 + R +YGG Sbjct: 99 HMRGVNVVALYGG 111 Score = 32.0 bits (71), Expect = 1.4 Identities = 15/27 (55%), Positives = 19/27 (70%) Frame = +2 Query: 224 LRDYVLAEFKNGKSPIMAATDVAARGL 304 LR+ L K+G+ I+ ATDVAARGL Sbjct: 282 LREQTLERLKDGRLDILIATDVAARGL 308
>DEAD_ECO57 (Q8XA87) Cold-shock DEAD box protein A (EC 3.6.1.-) (ATP-dependent| RNA helicase deaD) Length = 628 Score = 57.0 bits (136), Expect = 4e-08 Identities = 33/73 (45%), Positives = 46/73 (63%), Gaps = 1/73 (1%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DV+G+A+TGSGKT ++ LP L ++ P L+ P +L+LAPTRELAVQ+ T F Sbjct: 44 DVLGMAQTGSGKTAAFSLPLLQNL--DPELK---APQILVLAPTRELAVQVAEAMTDFSK 98 Query: 184 YSR-TRSTCIYGG 219 + R +YGG Sbjct: 99 HMRGVNVVALYGG 111 Score = 32.0 bits (71), Expect = 1.4 Identities = 15/27 (55%), Positives = 19/27 (70%) Frame = +2 Query: 224 LRDYVLAEFKNGKSPIMAATDVAARGL 304 LR+ L K+G+ I+ ATDVAARGL Sbjct: 282 LREQTLERLKDGRLDILIATDVAARGL 308
>VASA_DROME (P09052) ATP-dependent RNA helicase vasa (EC 3.6.1.-) (Antigen| Mab46F11) Length = 661 Score = 57.0 bits (136), Expect = 4e-08 Identities = 31/72 (43%), Positives = 45/72 (62%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 D++ A+TGSGKT +++LP L + P + P V+I++PTRELA+QI EA KF Sbjct: 284 DLMACAQTGSGKTAAFLLPILSKLLEDPHELELGRPQVVIVSPTRELAIQIFNEARKFAF 343 Query: 184 YSRTRSTCIYGG 219 S + +YGG Sbjct: 344 ESYLKIGIVYGG 355 Score = 32.7 bits (73), Expect = 0.85 Identities = 14/34 (41%), Positives = 21/34 (61%) Frame = +2 Query: 203 HVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 H ++ R+ L +FKNG ++ AT VA+RGL Sbjct: 520 HGDRLQSQREQALRDFKNGSMKVLIATSVASRGL 553
>PRP28_CANAL (Q59W52) Pre-mRNA splicing ATP-dependent RNA helicase PRP28 (EC| 3.6.1.-) Length = 581 Score = 57.0 bits (136), Expect = 4e-08 Identities = 32/63 (50%), Positives = 46/63 (73%), Gaps = 5/63 (7%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGA----QPRLEQ-GDGPIVLILAPTRELAVQIQAEA 168 DV+G+AETGSGKTL++++P L ++ + + E+ + P+ LILAPTRELA+QI EA Sbjct: 207 DVVGVAETGSGKTLAFLIPVLNYILSIDENYLKYEKISNEPVGLILAPTRELALQITKEA 266 Query: 169 TKF 177 KF Sbjct: 267 EKF 269 Score = 36.2 bits (82), Expect = 0.077 Identities = 20/64 (31%), Positives = 38/64 (59%) Frame = +2 Query: 161 QKLQSLDHTRELEAHVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGLGMVTCLNIRIML 340 Q+L S D + H S + +R+ + F+N +S ++ ATDVAARG+ + N+ +++ Sbjct: 459 QELSSND-INNVVIHGSKSQDMREQAITNFRNHESEVLIATDVAARGIDIP---NVTLVI 514 Query: 341 *FQL 352 +Q+ Sbjct: 515 NYQM 518
>DBP3_YEAST (P20447) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-) (DEAD box| protein 3) (Helicase CA3) Length = 523 Score = 57.0 bits (136), Expect = 4e-08 Identities = 30/75 (40%), Positives = 44/75 (58%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DV+G+AETGSGKT ++ +P + H+ ++ G VL+++PTRELA QI Sbjct: 151 DVVGVAETGSGKTFAFGVPAISHLMND---QKKRGIQVLVISPTRELASQIYDNLIVLTD 207 Query: 184 YSRTRSTCIYGGAPK 228 + C+YGG PK Sbjct: 208 KVGMQCCCVYGGVPK 222 Score = 36.2 bits (82), Expect = 0.077 Identities = 18/34 (52%), Positives = 22/34 (64%) Frame = +2 Query: 203 HVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 H + R L EFK+GKS ++ ATDVAARGL Sbjct: 390 HGDLSQQQRTQALNEFKSGKSNLLLATDVAARGL 423
>RRP3_YEAST (P38712) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-) (Ribosomal| RNA-processing protein RRP3) Length = 501 Score = 56.6 bits (135), Expect = 5e-08 Identities = 35/73 (47%), Positives = 42/73 (57%), Gaps = 1/73 (1%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPI-VLILAPTRELAVQIQAEATKFG 180 D+IG+A+TGSGKT ++ +P L RL P ILAPTRELA QI+ G Sbjct: 120 DIIGLAQTGSGKTAAFAIPIL------NRLWHDQEPYYACILAPTRELAQQIKETFDSLG 173 Query: 181 SYSRTRSTCIYGG 219 S RSTCI GG Sbjct: 174 SLMGVRSTCIVGG 186 Score = 30.0 bits (66), Expect = 5.5 Identities = 14/19 (73%), Positives = 15/19 (78%) Frame = +2 Query: 248 FKNGKSPIMAATDVAARGL 304 FK GK I+ ATDVAARGL Sbjct: 367 FKAGKRSILVATDVAARGL 385
>DBP4_ASPOR (Q2UHB7) ATP-dependent RNA helicase dbp4 (EC 3.6.1.-)| Length = 796 Score = 56.2 bits (134), Expect = 7e-08 Identities = 31/72 (43%), Positives = 46/72 (63%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 D++G A+TGSGKTL++++P L ++ + + + DG LIL+PTRELA+QI K G Sbjct: 84 DILGAAKTGSGKTLAFLIPVLENL-YRKQWSEHDGLGALILSPTRELAIQIFEVLRKIGR 142 Query: 184 YSRTRSTCIYGG 219 Y + I GG Sbjct: 143 YHTFSAGLIIGG 154
>DBP4_DEBHA (Q6BXG0) ATP-dependent RNA helicase DBP4 (EC 3.6.1.-)| Length = 766 Score = 56.2 bits (134), Expect = 7e-08 Identities = 29/72 (40%), Positives = 47/72 (65%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DV+G A+TGSGKTL++++P + + + ++ + DG LI++PTRELAVQI K G Sbjct: 85 DVMGTAKTGSGKTLAFLIPTIESL-IRNKITEYDGLAALIISPTRELAVQIFEVLVKIGK 143 Query: 184 YSRTRSTCIYGG 219 ++ + + GG Sbjct: 144 HNNFSAGLVTGG 155
>DBP4_CANGA (Q6FPT7) ATP-dependent RNA helicase DBP4 (EC 3.6.1.-)| Length = 765 Score = 56.2 bits (134), Expect = 7e-08 Identities = 31/72 (43%), Positives = 47/72 (65%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DV G A+TGSGKTL++++P L + + R + DG LI++PTRELA+QI K GS Sbjct: 80 DVFGTAKTGSGKTLAFLVPVLEKLYRE-RWTEFDGLGALIISPTRELAMQIYEVLVKIGS 138 Query: 184 YSRTRSTCIYGG 219 +++ + + GG Sbjct: 139 HTQFSAGLVIGG 150
>DEAD_HAEIN (P44586) Cold-shock DEAD box protein A homolog (EC 3.6.1.-)| (ATP-dependent RNA helicase deaD homolog) Length = 613 Score = 55.8 bits (133), Expect = 9e-08 Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 1/73 (1%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DV+G+A+TGSGKT ++ LP L + + P +L++APTRELA+Q+ F Sbjct: 44 DVLGMAQTGSGKTAAFALPLLAQIDPSEK-----HPQMLVMAPTRELAIQVADACELFVK 98 Query: 184 YSR-TRSTCIYGG 219 Y++ TR +YGG Sbjct: 99 YAQGTRIVTLYGG 111 Score = 32.3 bits (72), Expect = 1.1 Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 8/57 (14%) Frame = +2 Query: 158 RQKLQSLDHTRELEAHV--------STVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 R K +LD T LE + + LR+ L +NG I+ ATDVAARG+ Sbjct: 252 RTKTGTLDITELLEKNGFRSAALNGDMTQQLREQTLDRLRNGSLDIVVATDVAARGI 308
>DED1_CRYNE (Q5KN36) ATP-dependent RNA helicase ded1 (EC 3.6.1.-)| Length = 637 Score = 55.8 bits (133), Expect = 9e-08 Identities = 36/90 (40%), Positives = 46/90 (51%), Gaps = 14/90 (15%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGL----VHVGAQPRLEQGDG----------PIVLILAPTRE 141 D++ A+TGSGKT ++ P L + + P +EQ G P L+LAPTRE Sbjct: 199 DLMACAQTGSGKTGGFLFPILSALFTYGPSTPPVEQDTGYGYRRTKKVYPTALVLAPTRE 258 Query: 142 LAVQIQAEATKFGSYSRTRSTCIYGGAPKG 231 L QI EA KF S R +YGGA G Sbjct: 259 LVSQIHEEARKFAYRSWVRPAVVYGGADIG 288 Score = 34.3 bits (77), Expect = 0.29 Identities = 16/34 (47%), Positives = 22/34 (64%) Frame = +2 Query: 203 HVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 H + R+ L FK+G++PI+ AT VAARGL Sbjct: 453 HGDRTQREREAALYAFKSGRAPILVATAVAARGL 486
>DBP10_CRYNE (Q5KMS9) ATP-dependent RNA helicase DBP10 (EC 3.6.1.-)| Length = 802 Score = 55.8 bits (133), Expect = 9e-08 Identities = 28/51 (54%), Positives = 36/51 (70%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQI 156 D++G+A TGSGKTL+Y++P L G+ G GP LIL P+RELAVQI Sbjct: 68 DILGMARTGSGKTLAYLIPLLQRTGS---THHGQGPRALILCPSRELAVQI 115
>DBP4_ASPFU (Q4WM60) ATP-dependent RNA helicase dbp4 (EC 3.6.1.-)| Length = 787 Score = 55.5 bits (132), Expect = 1e-07 Identities = 31/72 (43%), Positives = 45/72 (62%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 D++G A+TGSGKTL++++P L ++ + E DG LIL+PTRELA+QI K G Sbjct: 86 DILGAAKTGSGKTLAFLVPVLENLYRKQWAEH-DGLGALILSPTRELAIQIFEVLRKIGR 144 Query: 184 YSRTRSTCIYGG 219 Y + + GG Sbjct: 145 YHTFSAGLVIGG 156
>DED1_NEUCR (Q9P6U9) ATP-dependent RNA helicase ded-1 (EC 3.6.1.-)| Length = 688 Score = 55.5 bits (132), Expect = 1e-07 Identities = 37/88 (42%), Positives = 43/88 (48%), Gaps = 12/88 (13%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGL---VHVGAQPRLEQGDG---------PIVLILAPTRELA 147 D++ A+TGSGKT ++ P L H G P G P LILAPTREL Sbjct: 233 DLMACAQTGSGKTGGFLFPILSQSFHTGPSPIPASAAGAYGRQRKAYPTALILAPTRELV 292 Query: 148 VQIQAEATKFGSYSRTRSTCIYGGAPKG 231 QI EA KF S R +YGGA G Sbjct: 293 SQIYDEARKFAYRSWVRPCVVYGGADIG 320 Score = 34.3 bits (77), Expect = 0.29 Identities = 16/34 (47%), Positives = 21/34 (61%) Frame = +2 Query: 203 HVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 H + R+ L F+NG+ PI+ AT VAARGL Sbjct: 484 HGDRTQRERERALEMFRNGRCPILVATAVAARGL 517
>DED1_YEAST (P06634) ATP-dependent RNA helicase DED1 (EC 3.6.1.-) (DEAD box| protein 1) Length = 604 Score = 55.5 bits (132), Expect = 1e-07 Identities = 41/117 (35%), Positives = 54/117 (46%), Gaps = 10/117 (8%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVH---VGAQPRLEQGDG-------PIVLILAPTRELAVQ 153 D++ A+TGSGKT ++ P L G P+ E P +I+APTRELA Q Sbjct: 181 DLMACAQTGSGKTGGFLFPVLSESFKTGPSPQPESQGSFYQRKAYPTAVIMAPTRELATQ 240 Query: 154 IQAEATKFGSYSRTRSTCIYGGAPKGLCSGRV*EWEESYNGCHRCSGTWSWYGDLFE 324 I EA KF S ++ +YGG+P G + E GC T DL E Sbjct: 241 IFDEAKKFTYRSWVKACVVYGGSPIGN------QLREIERGCDLLVATPGRLNDLLE 291 Score = 30.8 bits (68), Expect = 3.2 Identities = 15/43 (34%), Positives = 24/43 (55%) Frame = +2 Query: 176 LDHTRELEAHVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 + + R H + R+ LA F++G + ++ AT VAARGL Sbjct: 421 MQNFRATAIHGDRTQSERERALAAFRSGAATLLVATAVAARGL 463
>RRP3_ASHGO (Q75EW9) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 487 Score = 55.5 bits (132), Expect = 1e-07 Identities = 34/73 (46%), Positives = 42/73 (57%), Gaps = 1/73 (1%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPI-VLILAPTRELAVQIQAEATKFG 180 D+IG+A+TGSGKT ++ +P L RL P ILAPTRELA QI+ G Sbjct: 105 DIIGLAQTGSGKTAAFAIPIL------NRLWHDQQPYYACILAPTRELAQQIKETFDSLG 158 Query: 181 SYSRTRSTCIYGG 219 S R+TCI GG Sbjct: 159 SLMGVRTTCIVGG 171 Score = 31.2 bits (69), Expect = 2.5 Identities = 17/34 (50%), Positives = 20/34 (58%) Frame = +2 Query: 203 HVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 H ++ R L FK GK I+ ATDVAARGL Sbjct: 338 HGDLNQNQRTGALDLFKAGKKSILVATDVAARGL 371
>EXP9_STRR6 (P0A4D8) Probable ATP-dependent RNA helicase exp9 (EC 3.6.1.-)| (Exported protein 9) Length = 524 Score = 55.5 bits (132), Expect = 1e-07 Identities = 31/73 (42%), Positives = 43/73 (58%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DVIG A+TG+GKT ++ LP L + + Q L++APTRELAVQ Q E +FG Sbjct: 40 DVIGQAQTGTGKTAAFGLPTLEKIRTEEATIQA-----LVIAPTRELAVQSQEELFRFGR 94 Query: 184 YSRTRSTCIYGGA 222 + +YGG+ Sbjct: 95 SKGVKVRSVYGGS 107 Score = 34.3 bits (77), Expect = 0.29 Identities = 17/34 (50%), Positives = 22/34 (64%) Frame = +2 Query: 203 HVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 H ++ R VL +FKNG ++ ATDVAARGL Sbjct: 270 HGDLDQNKRLRVLRDFKNGNLDVLVATDVAARGL 303
>EXP9_STRPN (P0A4D7) Probable ATP-dependent RNA helicase exp9 (EC 3.6.1.-)| (Exported protein 9) Length = 524 Score = 55.5 bits (132), Expect = 1e-07 Identities = 31/73 (42%), Positives = 43/73 (58%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DVIG A+TG+GKT ++ LP L + + Q L++APTRELAVQ Q E +FG Sbjct: 40 DVIGQAQTGTGKTAAFGLPTLEKIRTEEATIQA-----LVIAPTRELAVQSQEELFRFGR 94 Query: 184 YSRTRSTCIYGGA 222 + +YGG+ Sbjct: 95 SKGVKVRSVYGGS 107 Score = 34.3 bits (77), Expect = 0.29 Identities = 17/34 (50%), Positives = 22/34 (64%) Frame = +2 Query: 203 HVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 H ++ R VL +FKNG ++ ATDVAARGL Sbjct: 270 HGDLDQNKRLRVLRDFKNGNLDVLVATDVAARGL 303
>RRP3_ASPOR (Q2UNB7) ATP-dependent rRNA helicase rrp3 (EC 3.6.1.-)| Length = 472 Score = 55.1 bits (131), Expect = 2e-07 Identities = 33/72 (45%), Positives = 42/72 (58%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 D+IG+AETGSGKT ++ LP L Q +++ L+LAPTRELA QI GS Sbjct: 91 DLIGLAETGSGKTAAFALPIL-----QALMDKPSSFFGLVLAPTRELAYQISQAFEGLGS 145 Query: 184 YSRTRSTCIYGG 219 RST + GG Sbjct: 146 TISVRSTVLVGG 157
>HAS1_ASPFU (Q4WQM4) ATP-dependent RNA helicase has1 (EC 3.6.1.-)| Length = 622 Score = 55.1 bits (131), Expect = 2e-07 Identities = 30/73 (41%), Positives = 46/73 (63%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DV+G A+TGSGKTLS+++P + + A R + +G V++++PTRELA+QI A + Sbjct: 179 DVLGAAKTGSGKTLSFLIPAVEMLSAL-RFKPRNGTGVIVVSPTRELALQIFGVARELCQ 237 Query: 184 YSRTRSTCIYGGA 222 Y + GGA Sbjct: 238 YHSQTYGIVIGGA 250 Score = 31.6 bits (70), Expect = 1.9 Identities = 19/51 (37%), Positives = 23/51 (45%) Frame = +2 Query: 152 KYRQKLQSLDHTRELEAHVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 KY +L + LE H + R EF N K + TDVAARGL Sbjct: 401 KYHAELLNYIDLPVLELHGKQKQQKRTNTFFEFCNAKQGTLICTDVAARGL 451
>RRP3_CANGA (Q6FNK8) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 493 Score = 55.1 bits (131), Expect = 2e-07 Identities = 33/73 (45%), Positives = 43/73 (58%), Gaps = 1/73 (1%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPI-VLILAPTRELAVQIQAEATKFG 180 DVIG+A+TGSGKT ++ +P L +L + P +LAPTRELA QI+ G Sbjct: 112 DVIGLAQTGSGKTAAFAIPIL------NKLWEDQQPYYACVLAPTRELAQQIKETFDSLG 165 Query: 181 SYSRTRSTCIYGG 219 S R+TCI GG Sbjct: 166 SLMGVRTTCIVGG 178 Score = 31.6 bits (70), Expect = 1.9 Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 3/51 (5%) Frame = +2 Query: 161 QKLQSLDHTRELEA---HVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 ++L L + E A H ++ R L FK GK I+ ATDVAARGL Sbjct: 327 ERLSGLCNLLEFSATALHGDLNQNQRTGALDLFKAGKRSILVATDVAARGL 377
>RRP3_KLULA (Q6CT85) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 487 Score = 55.1 bits (131), Expect = 2e-07 Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 2/74 (2%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHV--GAQPRLEQGDGPIVLILAPTRELAVQIQAEATKF 177 D+IG+A+TGSGKT ++ +P L + QP ILAPTRELA QI+ Sbjct: 106 DIIGLAQTGSGKTAAFAIPILNQLWHDQQPYY-------ACILAPTRELAQQIKETFDSL 158 Query: 178 GSYSRTRSTCIYGG 219 GS RSTCI GG Sbjct: 159 GSLMGVRSTCIVGG 172 Score = 31.2 bits (69), Expect = 2.5 Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 3/51 (5%) Frame = +2 Query: 161 QKLQSLDHTRELEA---HVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 +++ +L + E A H ++ R L FK GK I+ ATDVAARGL Sbjct: 321 ERISNLCNLLEFSATALHGDLNQNQRTGALDLFKAGKRSILVATDVAARGL 371
>RRP3_DEBHA (Q6BQ61) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 477 Score = 55.1 bits (131), Expect = 2e-07 Identities = 32/72 (44%), Positives = 41/72 (56%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 D+IG+A+TGSGKT ++ +P L + G L+LAPTRELA QI+ GS Sbjct: 104 DIIGLAQTGSGKTAAFAIPILQALWEAQAAYYG-----LVLAPTRELAYQIKETFDALGS 158 Query: 184 YSRTRSTCIYGG 219 RS CI GG Sbjct: 159 SMGLRSVCIVGG 170 Score = 31.2 bits (69), Expect = 2.5 Identities = 15/22 (68%), Positives = 18/22 (81%) Frame = +2 Query: 239 LAEFKNGKSPIMAATDVAARGL 304 L +FK GK+ I+ ATDVAARGL Sbjct: 347 LNKFKAGKANILIATDVAARGL 368
>RRP3_CRYNE (Q5KBE2) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 484 Score = 55.1 bits (131), Expect = 2e-07 Identities = 32/72 (44%), Positives = 41/72 (56%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 D+IG+A+TGSGKT ++ LP L Q E L+LAPTRELA QI + T GS Sbjct: 77 DIIGLAQTGSGKTAAFSLPIL-----QTLWENPQPFFALVLAPTRELAYQISQQVTSLGS 131 Query: 184 YSRTRSTCIYGG 219 R+ + GG Sbjct: 132 GIGVRTAVLVGG 143 Score = 30.8 bits (68), Expect = 3.2 Identities = 16/34 (47%), Positives = 21/34 (61%) Frame = +2 Query: 203 HVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 H + LR L +FK+G I+ ATDVA+RGL Sbjct: 308 HGQMTQSLRLASLNKFKSGGRSILVATDVASRGL 341
>RRP3_ASPFU (Q4WJE9) ATP-dependent rRNA helicase rrp3 (EC 3.6.1.-)| Length = 472 Score = 54.7 bits (130), Expect = 2e-07 Identities = 34/72 (47%), Positives = 39/72 (54%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 D+IG+AETGSGKT ++ LP L Q +E LILAPTRELA QI GS Sbjct: 91 DLIGLAETGSGKTAAFALPIL-----QALMENPQSFFGLILAPTRELAFQISKSFESLGS 145 Query: 184 YSRTRSTCIYGG 219 R I GG Sbjct: 146 TINVRCAVIVGG 157
>RRP3_CANAL (Q5ACU6) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 399 Score = 54.7 bits (130), Expect = 2e-07 Identities = 33/74 (44%), Positives = 43/74 (58%), Gaps = 2/74 (2%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHV--GAQPRLEQGDGPIVLILAPTRELAVQIQAEATKF 177 D+IG+A+TGSGKT ++ +P L + QP L+LAPTRELA QI+ Sbjct: 22 DIIGLAQTGSGKTAAFAIPILQSLWHAQQPYF-------ALVLAPTRELAFQIKDTFDAL 74 Query: 178 GSYSRTRSTCIYGG 219 GS RS+CI GG Sbjct: 75 GSSMGLRSSCIVGG 88
>DRS1_GIBZE (Q4I830) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 796 Score = 54.7 bits (130), Expect = 2e-07 Identities = 32/72 (44%), Positives = 46/72 (63%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DV+G AETGSGKT ++ILP L + +P+ + V++L PTRELA+Q A ATK + Sbjct: 295 DVVGGAETGSGKTGAFILPILERLLYRPK--KIPTTRVVVLLPTRELAIQCHAVATKLAA 352 Query: 184 YSRTRSTCIYGG 219 ++ + T GG Sbjct: 353 FTDIKFTLAVGG 364
>RRP3_NEUCR (Q7RY59) ATP-dependent rRNA helicase rrp-3 (EC 3.6.1.-)| Length = 515 Score = 54.7 bits (130), Expect = 2e-07 Identities = 34/72 (47%), Positives = 40/72 (55%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 D+IGIAETGSGKT ++ LP L Q L++ L+LAPTRELA QI GS Sbjct: 129 DIIGIAETGSGKTAAFALPIL-----QALLDKPAPLFALVLAPTRELAAQIAQAFEALGS 183 Query: 184 YSRTRSTCIYGG 219 R I GG Sbjct: 184 LISLRCALILGG 195
>DDX4_MACFA (Q4R5S7) Probable ATP-dependent RNA helicase DDX4 (EC 3.6.1.-)| (DEAD box protein 4) (VASA homolog) Length = 725 Score = 54.7 bits (130), Expect = 2e-07 Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 4/80 (5%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVG----AQPRLEQGDGPIVLILAPTRELAVQIQAEAT 171 D++ A+TGSGKT +++LP L H+ ++ P +I+APTREL QI EA Sbjct: 328 DLMACAQTGSGKTAAFLLPILAHMMHDGITASCFKELQEPECIIVAPTRELVNQIYLEAR 387 Query: 172 KFGSYSRTRSTCIYGGAPKG 231 KF + R+ IYGG G Sbjct: 388 KFSFGTCVRAVVIYGGTQLG 407 Score = 33.9 bits (76), Expect = 0.38 Identities = 15/34 (44%), Positives = 21/34 (61%) Frame = +2 Query: 203 HVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 H + R+ L +F+ GK P++ AT VAARGL Sbjct: 572 HGDREQREREQALGDFRCGKCPVLVATSVAARGL 605
>DBP4_ASHGO (Q75C76) ATP-dependent RNA helicase DBP4 (EC 3.6.1.-)| Length = 763 Score = 54.7 bits (130), Expect = 2e-07 Identities = 30/72 (41%), Positives = 45/72 (62%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DV+G A+TGSGKTL++++P L + + R + DG L+++PTRELA+QI K G Sbjct: 80 DVLGAAKTGSGKTLAFLVPVLEKLYHE-RWTELDGLGALVISPTRELAMQIYEVLVKIGK 138 Query: 184 YSRTRSTCIYGG 219 Y + + GG Sbjct: 139 YMSFSAGLVIGG 150
>RHLB_SHEON (Q8EJQ5) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 439 Score = 54.7 bits (130), Expect = 2e-07 Identities = 27/74 (36%), Positives = 46/74 (62%), Gaps = 2/74 (2%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHV--GAQPRLEQGDGPIVLILAPTRELAVQIQAEATKF 177 D+ G A+TG+GKT+++++ H+ + P Q + P +I+APTRELA+QI +A Sbjct: 48 DIAGQAQTGTGKTMAFLVATFNHLLSSSIPEGRQLNQPRAIIMAPTRELAIQIAKDAILL 107 Query: 178 GSYSRTRSTCIYGG 219 ++R + +YGG Sbjct: 108 AKHTRLKVGIVYGG 121 Score = 29.6 bits (65), Expect = 7.2 Identities = 13/23 (56%), Positives = 17/23 (73%) Frame = +2 Query: 236 VLAEFKNGKSPIMAATDVAARGL 304 +L +F G+ I+ ATDVAARGL Sbjct: 298 ILEQFTQGQLDILVATDVAARGL 320
>RRP3_GIBZE (Q4IFI0) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 486 Score = 54.3 bits (129), Expect = 3e-07 Identities = 35/84 (41%), Positives = 45/84 (53%), Gaps = 3/84 (3%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 D+IG+AETGSGKT ++ LP L Q L++ L+LAPTRELA QI GS Sbjct: 99 DIIGLAETGSGKTAAFALPVL-----QALLDKPQPLFGLVLAPTRELATQIGQAFEALGS 153 Query: 184 YSRTRSTCIYGG---APKGLCSGR 246 R I GG P+ + G+ Sbjct: 154 LISLRCAVIVGGLDMVPQAIALGK 177
>DBP4_YEAST (P20448) ATP-dependent RNA helicase DBP4 (EC 3.6.1.-) (DEAD box| protein 4) (Helicase CA4) (Helicase UF1) Length = 770 Score = 54.3 bits (129), Expect = 3e-07 Identities = 29/72 (40%), Positives = 47/72 (65%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DV+ A+TGSGKTL++++P ++ + + + DG LI++PTRELA+QI TK GS Sbjct: 80 DVLAAAKTGSGKTLAFLVP-VIEKLYREKWTEFDGLGALIISPTRELAMQIYEVLTKIGS 138 Query: 184 YSRTRSTCIYGG 219 ++ + + GG Sbjct: 139 HTSFSAGLVIGG 150
>DBP4_EMENI (Q5BFU1) ATP-dependent RNA helicase dbp4 (EC 3.6.1.-)| Length = 812 Score = 53.9 bits (128), Expect = 4e-07 Identities = 30/72 (41%), Positives = 45/72 (62%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DV+G A+TGSGKTL++++P L ++ + + DG LI++PTRELA+QI K G Sbjct: 87 DVLGAAKTGSGKTLAFLVPILENL-YRKQWSDHDGLGALIISPTRELAIQIFEVLRKIGR 145 Query: 184 YSRTRSTCIYGG 219 Y + + GG Sbjct: 146 YHTFSAGLVIGG 157
>RHLE_ECOLI (P25888) Putative ATP-dependent RNA helicase rhlE (EC 3.6.1.-)| Length = 454 Score = 53.9 bits (128), Expect = 4e-07 Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 1/73 (1%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPI-VLILAPTRELAVQIQAEATKFG 180 D++ A+TG+GKT + LP L H+ + +G P+ LIL PTRELA QI + Sbjct: 40 DLMASAQTGTGKTAGFTLPLLQHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYS 99 Query: 181 SYSRTRSTCIYGG 219 Y RS ++GG Sbjct: 100 KYLNIRSLVVFGG 112 Score = 34.7 bits (78), Expect = 0.22 Identities = 17/42 (40%), Positives = 24/42 (57%) Frame = +2 Query: 179 DHTRELEAHVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 D R H + + R LA+FK+G ++ ATD+AARGL Sbjct: 268 DGIRSAAIHGNKSQGARTRALADFKSGDIRVLVATDIAARGL 309
>RHLB_PASMU (Q9CJS1) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 423 Score = 53.9 bits (128), Expect = 4e-07 Identities = 30/72 (41%), Positives = 42/72 (58%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DV G A+TG+GKT++++ H+ Q + G P LILAPTRELAVQI +A Sbjct: 48 DVAGQAQTGTGKTMAFLTATFHHLLTQQGDKGGRQPRALILAPTRELAVQINNDAALLTK 107 Query: 184 YSRTRSTCIYGG 219 + ++ YGG Sbjct: 108 ATGLKTGLAYGG 119
>RRP3_EMENI (Q5B5E7) ATP-dependent rRNA helicase rrp3 (EC 3.6.1.-)| Length = 465 Score = 53.9 bits (128), Expect = 4e-07 Identities = 34/72 (47%), Positives = 40/72 (55%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DVIG+AETGSGKT ++ LP L + P+ G L+LAPTRELA QI GS Sbjct: 85 DVIGLAETGSGKTAAFALPMLQALMEAPQTLFG-----LVLAPTRELAYQISQAFETLGS 139 Query: 184 YSRTRSTCIYGG 219 R I GG Sbjct: 140 TIGVRCAVIVGG 151
>DED1_CANGA (Q8TFK8) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 617 Score = 53.5 bits (127), Expect = 5e-07 Identities = 41/117 (35%), Positives = 54/117 (46%), Gaps = 10/117 (8%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQG--DG--------PIVLILAPTRELAVQ 153 D++ A+TGSGKT ++ P L E+ DG P +++APTRELA Q Sbjct: 184 DLMACAQTGSGKTGGFLFPVLSESFLTGPAEKAANDGYSYQRKAFPTAVVMAPTRELATQ 243 Query: 154 IQAEATKFGSYSRTRSTCIYGGAPKGLCSGRV*EWEESYNGCHRCSGTWSWYGDLFE 324 I EA KF S + +YGGAP G + E +GC T DL E Sbjct: 244 IFDEAKKFCYRSWVKPCVVYGGAPIGN------QMREMDHGCDLLVATPGRLNDLLE 294 Score = 30.8 bits (68), Expect = 3.2 Identities = 14/26 (53%), Positives = 20/26 (76%) Frame = +2 Query: 227 RDYVLAEFKNGKSPIMAATDVAARGL 304 R+ LA F++G++ I+ AT VAARGL Sbjct: 441 RERALAAFRSGRANILVATAVAARGL 466
>DDX21_MOUSE (Q9JIK5) Nucleolar RNA helicase 2 (EC 3.6.1.-) (Nucleolar RNA| helicase II) (Nucleolar RNA helicase Gu) (RH II/Gu) (Gu-alpha) (DEAD box protein 21) Length = 851 Score = 53.5 bits (127), Expect = 5e-07 Identities = 34/79 (43%), Positives = 47/79 (59%), Gaps = 3/79 (3%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHV--GAQPRLEQGDGPIVLILAPTRELAVQIQAEATKF 177 D+I A TG+GKT S+ +P + + G Q R ++G P VL+LAPTRELA Q+ + F Sbjct: 297 DLIAQARTGTGKTFSFAIPLIEKLQGGLQER-KRGRAPQVLVLAPTRELANQVSKD---F 352 Query: 178 GSYSRTRS-TCIYGGAPKG 231 ++ S C YGG P G Sbjct: 353 SDITKKLSVACFYGGTPYG 371 Score = 30.0 bits (66), Expect = 5.5 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = +2 Query: 203 HVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 H + R+ L F+NG ++ AT+VAARGL Sbjct: 540 HGDIPQKQREITLKGFRNGNFGVLVATNVAARGL 573
>DDX21_HUMAN (Q9NR30) Nucleolar RNA helicase 2 (EC 3.6.1.-) (Nucleolar RNA| helicase II) (Nucleolar RNA helicase Gu) (RH II/Gu) (Gu-alpha) (DEAD box protein 21) Length = 783 Score = 53.5 bits (127), Expect = 5e-07 Identities = 34/79 (43%), Positives = 47/79 (59%), Gaps = 3/79 (3%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGL--VHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKF 177 D+I A TG+GKT S+ +P + +H Q R ++G P VL+LAPTRELA Q+ + F Sbjct: 225 DLIAQARTGTGKTFSFAIPLIEKLHGELQDR-KRGRAPQVLVLAPTRELANQVSKD---F 280 Query: 178 GSYSRTRS-TCIYGGAPKG 231 ++ S C YGG P G Sbjct: 281 SDITKKLSVACFYGGTPYG 299 Score = 30.0 bits (66), Expect = 5.5 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = +2 Query: 203 HVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 H + R+ L F+NG ++ AT+VAARGL Sbjct: 468 HGDIPQKQREITLKGFRNGSFGVLVATNVAARGL 501
>DEAD_MYCTU (Q11039) Cold-shock DEAD box protein A homolog (EC 3.6.1.-)| (ATP-dependent RNA helicase deaD homolog) Length = 563 Score = 53.1 bits (126), Expect = 6e-07 Identities = 28/74 (37%), Positives = 46/74 (62%), Gaps = 1/74 (1%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DV+G+A+TG+GKT ++ +P L + ++ P L+L PTRELA+Q+ ++G+ Sbjct: 52 DVVGLAQTGTGKTAAFAIPMLSKIDITSKV-----PQALVLVPTRELALQVAEAFGRYGA 106 Query: 184 Y-SRTRSTCIYGGA 222 Y S+ IYGG+ Sbjct: 107 YLSQLNVLPIYGGS 120
>DBP4_KLULA (Q6CRF4) ATP-dependent RNA helicase DBP4 (EC 3.6.1.-)| Length = 770 Score = 53.1 bits (126), Expect = 6e-07 Identities = 28/72 (38%), Positives = 46/72 (63%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DV+G A+TGSGKTL++++P + + + + DG LI++PTRELA+QI +K G Sbjct: 80 DVLGAAKTGSGKTLAFLIPVIEKLYREKWTDM-DGLGALIISPTRELAMQIYEVLSKIGK 138 Query: 184 YSRTRSTCIYGG 219 ++ + + GG Sbjct: 139 HTTFSAGLVIGG 150
>GLH1_CAEEL (P34689) ATP-dependent RNA helicase glh-1 (EC 3.6.1.-) (Germline| helicase 1) Length = 763 Score = 53.1 bits (126), Expect = 6e-07 Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 4/86 (4%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRL----EQGDGPIVLILAPTRELAVQIQAEAT 171 D++ A+TGSGKT +++LP + + L E G P +IL PTRELA QI E Sbjct: 380 DIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGR 439 Query: 172 KFGSYSRTRSTCIYGGAPKGLCSGRV 249 KF + +YGG G G++ Sbjct: 440 KFAYQTMMEIKPVYGGLAVGYNKGQI 465 Score = 31.6 bits (70), Expect = 1.9 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = +2 Query: 203 HVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 H + + R L +F+NG P++ AT VA RGL Sbjct: 637 HGAREQRERSEALRQFRNGSKPVLIATAVAERGL 670
>RHLB_PHOLL (Q7MYL2) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 428 Score = 53.1 bits (126), Expect = 6e-07 Identities = 30/74 (40%), Positives = 43/74 (58%), Gaps = 2/74 (2%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLE--QGDGPIVLILAPTRELAVQIQAEATKF 177 DV G A+TG+GKTL+++ ++ P E Q + P LI+APTRELAVQI ++A Sbjct: 48 DVAGQAQTGTGKTLAFLASAFHYLLTHPAAEERQTNQPRALIMAPTRELAVQIYSDAEDL 107 Query: 178 GSYSRTRSTCIYGG 219 + + YGG Sbjct: 108 AQATGLKMGLAYGG 121 Score = 33.5 bits (75), Expect = 0.50 Identities = 19/37 (51%), Positives = 23/37 (62%) Frame = +2 Query: 194 LEAHVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 L V+ + LR +L EF NG I+ ATDVAARGL Sbjct: 286 LTGDVAQKKRLR--ILEEFSNGNIDILVATDVAARGL 320
>DBP8_CANGA (Q6FQZ0) ATP-dependent RNA helicase DBP8 (EC 3.6.1.-)| Length = 437 Score = 52.8 bits (125), Expect = 8e-07 Identities = 30/72 (41%), Positives = 39/72 (54%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 D IG A+TGSGKT+++ P L P G ++L PTRELA+QI + T GS Sbjct: 48 DCIGGAKTGSGKTIAFAGPMLTQWSEDPT-----GMFGIVLTPTRELAMQIAEQFTALGS 102 Query: 184 YSRTRSTCIYGG 219 Y R + GG Sbjct: 103 YMNIRVALVVGG 114
>DBP8_YARLI (Q6C799) ATP-dependent RNA helicase DBP8 (EC 3.6.1.-)| Length = 442 Score = 52.8 bits (125), Expect = 8e-07 Identities = 31/72 (43%), Positives = 38/72 (52%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 D IG A TGSGKT+++ P L P G L+L PTRELA+QI + T G+ Sbjct: 40 DCIGGARTGSGKTIAFAAPMLAEWSKDPC-----GIFGLVLTPTRELAIQIAEQFTALGA 94 Query: 184 YSRTRSTCIYGG 219 R IYGG Sbjct: 95 NMNIRVALIYGG 106 Score = 30.4 bits (67), Expect = 4.2 Identities = 26/91 (28%), Positives = 42/91 (46%) Frame = +2 Query: 44 YLTYYLVWFMLVHNLDSNKVMAQLS*SLLQQENWLFKYRQKLQSLDHTRELEAHVSTVEH 223 Y+ +W +L H D+ K A + + Q L R+ L +LD + H + Sbjct: 232 YVREAYLWAILTHP-DNEKKSAIIFVNRTQTAETL---RRMLMALD-VKTASLHSEMRQQ 286 Query: 224 LRDYVLAEFKNGKSPIMAATDVAARGLGMVT 316 R L F+ + ++ ATDVA+RGL + T Sbjct: 287 ERVNALGRFRAQAARVLVATDVASRGLDIPT 317
>DBP8_KLULA (Q6CXW0) ATP-dependent RNA helicase DBP8 (EC 3.6.1.-)| Length = 435 Score = 52.8 bits (125), Expect = 8e-07 Identities = 30/72 (41%), Positives = 39/72 (54%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 D IG A TGSGKT+++ P L P+ G ++L PTRELA+QI + T FGS Sbjct: 43 DCIGGANTGSGKTIAFAAPMLTKWSEDPQ-----GMFGIVLTPTRELAMQIAEQFTAFGS 97 Query: 184 YSRTRSTCIYGG 219 R + GG Sbjct: 98 AMNIRVAIVVGG 109
>DED1_ASPFU (Q4WP13) ATP-dependent RNA helicase ded1 (EC 3.6.1.-)| Length = 674 Score = 52.8 bits (125), Expect = 8e-07 Identities = 37/90 (41%), Positives = 43/90 (47%), Gaps = 14/90 (15%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGL---VHVGAQPRLEQGDG-----------PIVLILAPTRE 141 D++ A+TGSGKT ++ P L G P Q G P LILAPTRE Sbjct: 227 DLMACAQTGSGKTGGFLFPILSQAFQTGPSPVPAQASGQFGYGRQRKAYPTSLILAPTRE 286 Query: 142 LAVQIQAEATKFGSYSRTRSTCIYGGAPKG 231 L QI EA KF S R +YGGA G Sbjct: 287 LVSQIFDEARKFAYRSWVRPCVVYGGADIG 316 Score = 32.3 bits (72), Expect = 1.1 Identities = 15/34 (44%), Positives = 21/34 (61%) Frame = +2 Query: 203 HVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 H + R+ L F++G+ PI+ AT VAARGL Sbjct: 481 HGDRTQRERERALEMFRSGRCPILVATAVAARGL 514
>RHLB_YERPS (Q66G19) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 428 Score = 52.8 bits (125), Expect = 8e-07 Identities = 30/74 (40%), Positives = 44/74 (59%), Gaps = 2/74 (2%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLE--QGDGPIVLILAPTRELAVQIQAEATKF 177 DV G A+TG+GKTL+++ ++ + P E Q + P LI+APTRELAVQI ++A Sbjct: 48 DVAGQAQTGTGKTLAFLASTFHYLLSHPAEEGRQTNQPRALIMAPTRELAVQIHSDAESL 107 Query: 178 GSYSRTRSTCIYGG 219 + + YGG Sbjct: 108 SQVTGLKLGLAYGG 121 Score = 29.3 bits (64), Expect = 9.4 Identities = 17/37 (45%), Positives = 22/37 (59%) Frame = +2 Query: 194 LEAHVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 L V+ + LR +L +F G I+ ATDVAARGL Sbjct: 286 LTGDVAQKKRLR--ILEDFTKGDLDILVATDVAARGL 320
>RHLB_YERPE (Q8ZAD8) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 428 Score = 52.8 bits (125), Expect = 8e-07 Identities = 30/74 (40%), Positives = 44/74 (59%), Gaps = 2/74 (2%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLE--QGDGPIVLILAPTRELAVQIQAEATKF 177 DV G A+TG+GKTL+++ ++ + P E Q + P LI+APTRELAVQI ++A Sbjct: 48 DVAGQAQTGTGKTLAFLASTFHYLLSHPAEEGRQTNQPRALIMAPTRELAVQIHSDAESL 107 Query: 178 GSYSRTRSTCIYGG 219 + + YGG Sbjct: 108 SQVTGLKLGLAYGG 121 Score = 29.3 bits (64), Expect = 9.4 Identities = 17/37 (45%), Positives = 22/37 (59%) Frame = +2 Query: 194 LEAHVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 L V+ + LR +L +F G I+ ATDVAARGL Sbjct: 286 LTGDVAQKKRLR--ILEDFTKGDLDILVATDVAARGL 320
>HAS1_ASPOR (Q2UUN6) ATP-dependent RNA helicase has1 (EC 3.6.1.-)| Length = 596 Score = 52.4 bits (124), Expect = 1e-06 Identities = 28/73 (38%), Positives = 46/73 (63%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DV+G A+TGSGKTLS+++P + + A R + +G +I++PTRELA+QI + + + Sbjct: 158 DVLGAAKTGSGKTLSFLIPAIEMLSAL-RFKPRNGTGAIIVSPTRELALQIFGQVRELLA 216 Query: 184 YSRTRSTCIYGGA 222 + + GGA Sbjct: 217 HHSQTYGIVIGGA 229 Score = 29.3 bits (64), Expect = 9.4 Identities = 18/51 (35%), Positives = 23/51 (45%) Frame = +2 Query: 152 KYRQKLQSLDHTRELEAHVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 KY +L + L+ H + R EF N K + TDVAARGL Sbjct: 380 KYYGELLNYIDLPVLDLHGKQKQQKRTNTFFEFCNAKQGTLICTDVAARGL 430
>RRP3_USTMA (Q4P3U9) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 551 Score = 52.4 bits (124), Expect = 1e-06 Identities = 31/72 (43%), Positives = 40/72 (55%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DVIG+A+TGSGKT ++ +P L + P+ +LAPTRELA QI + GS Sbjct: 143 DVIGLAQTGSGKTAAFTIPILQALWDNPKPF-----FACVLAPTRELAYQISQQVEALGS 197 Query: 184 YSRTRSTCIYGG 219 RS I GG Sbjct: 198 TIGVRSATIVGG 209
>HAS1_CANAL (Q5AK59) ATP-dependent RNA helicase HAS1 (EC 3.6.1.-)| Length = 565 Score = 52.4 bits (124), Expect = 1e-06 Identities = 27/75 (36%), Positives = 46/75 (61%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DV+G A+TGSGKTL++++P + + +++ +G V+I+ PTRELA+QI A + Sbjct: 147 DVLGAAKTGSGKTLAFLIPA-IELLYSLKIKPRNGTAVIIITPTRELALQIFGVARELMQ 205 Query: 184 YSRTRSTCIYGGAPK 228 + + GGA + Sbjct: 206 FHSQTCGIVIGGADR 220 Score = 30.8 bits (68), Expect = 3.2 Identities = 16/37 (43%), Positives = 19/37 (51%) Frame = +2 Query: 194 LEAHVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 L+ H + R EF N K I+ TDVAARGL Sbjct: 382 LDLHGKQKQQKRTNTFFEFCNAKQGILVCTDVAARGL 418
>DED1_CANAL (Q5A4E2) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 672 Score = 52.4 bits (124), Expect = 1e-06 Identities = 33/86 (38%), Positives = 44/86 (51%), Gaps = 10/86 (11%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHV---GAQPRLEQGDG-------PIVLILAPTRELAVQ 153 D++ A+TGSGKT ++ P L G P E P +L++APTREL Q Sbjct: 225 DLMACAQTGSGKTGGFLFPVLSESYMKGPAPVPESNGAFSSHKVYPTILVMAPTRELVSQ 284 Query: 154 IQAEATKFGSYSRTRSTCIYGGAPKG 231 I E+ KF S R+ +YGGA G Sbjct: 285 IYEESKKFSYRSWVRACVVYGGADIG 310 Score = 37.4 bits (85), Expect = 0.034 Identities = 18/34 (52%), Positives = 23/34 (67%) Frame = +2 Query: 203 HVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 H ++ R+ LA FKNG +PI+ AT VAARGL Sbjct: 474 HGDRSQYEREKALAAFKNGAAPILVATAVAARGL 507
>DED1_USTMA (Q4P733) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 672 Score = 52.0 bits (123), Expect = 1e-06 Identities = 44/120 (36%), Positives = 53/120 (44%), Gaps = 13/120 (10%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILP---GLVHVGAQP--RLEQGDG--------PIVLILAPTREL 144 D++G A+TGSGKT ++ P L G P E G P LILAPTREL Sbjct: 228 DLMGCAQTGSGKTGGFLFPILSALFTHGPPPPSAAEMAQGGYNRRKAYPSTLILAPTREL 287 Query: 145 AVQIQAEATKFGSYSRTRSTCIYGGAPKGLCSGRV*EWEESYNGCHRCSGTWSWYGDLFE 324 QI EA KF S + +YGGA V + + GC S T DL E Sbjct: 288 VSQIHDEARKFTYRSWVKPAVVYGGA------DIVTQLRQIERGCDLLSATPGRLVDLME 341 Score = 35.0 bits (79), Expect = 0.17 Identities = 17/34 (50%), Positives = 22/34 (64%) Frame = +2 Query: 203 HVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 H + R+ L F++GK+PIM AT VAARGL Sbjct: 481 HGDRTQRERERALELFRSGKTPIMVATAVAARGL 514
>HAS1_GIBZE (Q4IEK8) ATP-dependent RNA helicase HAS1 (EC 3.6.1.-)| Length = 590 Score = 52.0 bits (123), Expect = 1e-06 Identities = 27/73 (36%), Positives = 48/73 (65%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DV+G A+TGSGKTL++++P ++ + + R + +G V++++PTRELA+QI A + + Sbjct: 154 DVLGAAKTGSGKTLAFLIP-VIEMLSSLRFKPRNGTGVIVVSPTRELALQIFGVARELMA 212 Query: 184 YSRTRSTCIYGGA 222 + + GGA Sbjct: 213 HHSQTYGIVIGGA 225 Score = 30.4 bits (67), Expect = 4.2 Identities = 18/51 (35%), Positives = 23/51 (45%) Frame = +2 Query: 152 KYRQKLQSLDHTRELEAHVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 KY +L + L+ H + R EF N K + TDVAARGL Sbjct: 375 KYHAELLNYIDLPVLDLHGKQKQQKRTNTFFEFCNAKQGTLICTDVAARGL 425
>HAS1_SCHPO (Q09916) ATP-dependent RNA helicase has1 (EC 3.6.1.-)| Length = 578 Score = 52.0 bits (123), Expect = 1e-06 Identities = 29/73 (39%), Positives = 46/73 (63%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DV+G A+TGSGKTL++++P + + A + + +G V+I++PTRELA+QI A + Sbjct: 128 DVLGAAKTGSGKTLAFLIPTIEMLYAL-KFKPRNGTGVIIISPTRELALQIFGVAKELLK 186 Query: 184 YSRTRSTCIYGGA 222 Y + GGA Sbjct: 187 YHHQTFGIVIGGA 199
>RHLB_IDILO (Q5QYF8) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 425 Score = 52.0 bits (123), Expect = 1e-06 Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 1/73 (1%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGD-GPIVLILAPTRELAVQIQAEATKFG 180 DV G A+TG+GKTL+++L + E+ + GP LI+APTRELA+QI +A Sbjct: 48 DVAGQAQTGTGKTLAFLLATFNRLMQNESSEKTESGPRALIMAPTRELAIQIAHDADALI 107 Query: 181 SYSRTRSTCIYGG 219 + + IYGG Sbjct: 108 EHCGLKMGVIYGG 120 Score = 29.6 bits (65), Expect = 7.2 Identities = 13/23 (56%), Positives = 16/23 (69%) Frame = +2 Query: 236 VLAEFKNGKSPIMAATDVAARGL 304 +L +F GK + ATDVAARGL Sbjct: 297 ILEDFAEGKLDFLVATDVAARGL 319
>DDX47_HUMAN (Q9H0S4) Probable ATP-dependent RNA helicase DDX47 (EC 3.6.1.-)| (DEAD box protein 47) Length = 455 Score = 51.6 bits (122), Expect = 2e-06 Identities = 32/72 (44%), Positives = 39/72 (54%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 D+IG+AETGSGKT ++ LP L LE L+L PTRELA QI + GS Sbjct: 63 DIIGLAETGSGKTGAFALPIL-----NALLETPQRLFALVLTPTRELAFQISEQFEALGS 117 Query: 184 YSRTRSTCIYGG 219 +S I GG Sbjct: 118 SIGVQSAVIVGG 129
>GLH2_CAEEL (Q966L9) ATP-dependent RNA helicase glh-2 (EC 3.6.1.-) (Germline| helicase 2) Length = 974 Score = 51.6 bits (122), Expect = 2e-06 Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 4/86 (4%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRL----EQGDGPIVLILAPTRELAVQIQAEAT 171 D++ A+TGSGKT +++LP + + + L E G P +IL PTREL QI E Sbjct: 591 DIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGR 650 Query: 172 KFGSYSRTRSTCIYGGAPKGLCSGRV 249 KF + +YGG G G++ Sbjct: 651 KFAYQTMMEIRPVYGGLAVGYNKGQI 676 Score = 31.6 bits (70), Expect = 1.9 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = +2 Query: 203 HVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 H + + R L +F+NG P++ AT VA RGL Sbjct: 848 HGAREQRERSEALRQFRNGSKPVLIATAVAERGL 881
>DBP8_ASHGO (Q756G5) ATP-dependent RNA helicase DBP8 (EC 3.6.1.-)| Length = 435 Score = 51.6 bits (122), Expect = 2e-06 Identities = 30/72 (41%), Positives = 39/72 (54%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 D IG A+TGSGKT+++ P L A P G ++L PTRELA+QI + T GS Sbjct: 45 DCIGGAKTGSGKTIAFAAPMLTKWSADPC-----GMFGIVLTPTRELAMQIAEQFTALGS 99 Query: 184 YSRTRSTCIYGG 219 R + GG Sbjct: 100 VMNIRVALVVGG 111
>DBP3_DEBHA (Q6BZ77) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 527 Score = 51.6 bits (122), Expect = 2e-06 Identities = 28/75 (37%), Positives = 43/75 (57%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DVIG+AETGSGKT ++ +P + ++ + G VL ++PTRELA+QI + Sbjct: 156 DVIGVAETGSGKTFAFGVPAINNILTHDK----KGLKVLCISPTRELALQIYDNLVDLTA 211 Query: 184 YSRTRSTCIYGGAPK 228 + + +YGG K Sbjct: 212 NTPLKCVAVYGGVSK 226 Score = 32.7 bits (73), Expect = 0.85 Identities = 17/46 (36%), Positives = 27/46 (58%) Frame = +2 Query: 203 HVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGLGMVTCLNIRIML 340 H + R L FK GK+ ++ ATDVAARGL + N+++++ Sbjct: 394 HGDLSQQQRTSALGAFKAGKTTLLLATDVAARGLDIP---NVKVVI 436
>DEAD_BUCBP (Q89AF9) Cold-shock DEAD box protein A homolog (EC 3.6.1.-)| (ATP-dependent RNA helicase deaD homolog) Length = 602 Score = 51.6 bits (122), Expect = 2e-06 Identities = 31/76 (40%), Positives = 46/76 (60%), Gaps = 4/76 (5%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DV+G+A+TGSGKT ++ LP L ++ R+ P +L+L PTRELAVQ+ A F + Sbjct: 45 DVLGMAQTGSGKTAAFALPLLHNIKLDVRV-----PQILVLTPTRELAVQV---AEAFSN 96 Query: 184 YSR----TRSTCIYGG 219 +S+ +YGG Sbjct: 97 FSKKLIGVHVLALYGG 112 Score = 32.7 bits (73), Expect = 0.85 Identities = 15/29 (51%), Positives = 21/29 (72%) Frame = +2 Query: 218 EHLRDYVLAEFKNGKSPIMAATDVAARGL 304 + LR+ L + K+G+ I+ ATDVAARGL Sbjct: 280 QSLREQTLEKLKDGRLDILIATDVAARGL 308
>DBP3_ASHGO (Q755A5) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 535 Score = 51.6 bits (122), Expect = 2e-06 Identities = 28/75 (37%), Positives = 42/75 (56%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DVIG+AETGSGKT ++ +P + + ++ + G L+++PTRELA QI + Sbjct: 162 DVIGVAETGSGKTFAFGVPAINSLMSEKSTPR--GVKCLVISPTRELASQIYDNLVQLTD 219 Query: 184 YSRTRSTCIYGGAPK 228 C+YGG K Sbjct: 220 KVGLNCCCVYGGVQK 234 Score = 32.7 bits (73), Expect = 0.85 Identities = 16/34 (47%), Positives = 21/34 (61%) Frame = +2 Query: 203 HVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 H + R L+EFK G + ++ ATDVAARGL Sbjct: 402 HGDLSQQQRTQALSEFKAGTANLLLATDVAARGL 435
>DBP4_NEUCR (Q7RZ35) ATP-dependent RNA helicase dbp-4 (EC 3.6.1.-)| Length = 823 Score = 51.2 bits (121), Expect = 2e-06 Identities = 30/72 (41%), Positives = 43/72 (59%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 D++G A TGSGKTL++++P L + + R + DG LI++PTRELAVQI K G Sbjct: 96 DILGAARTGSGKTLAFLVPVLEKL-YRARWTEYDGLGALIISPTRELAVQIFEVLRKIGR 154 Query: 184 YSRTRSTCIYGG 219 + + GG Sbjct: 155 NHSFSAGLVIGG 166
>HAS1_USTMA (Q4P6N0) ATP-dependent RNA helicase HAS1 (EC 3.6.1.-)| Length = 517 Score = 51.2 bits (121), Expect = 2e-06 Identities = 28/73 (38%), Positives = 46/73 (63%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DV+G A+TGSGKTLS+++P + + + + + +G +I++PTRELA+QI A + + Sbjct: 89 DVLGAAQTGSGKTLSFLIPA-IEMLHRLKFKPRNGTGAIIISPTRELALQIFGVAKELMA 147 Query: 184 YSRTRSTCIYGGA 222 + I GGA Sbjct: 148 HHHQTFGIIMGGA 160
>GLH3_CAEEL (O01836) ATP-dependent RNA helicase glh-3 (EC 3.6.1.-) (Germline| helicase 3) Length = 720 Score = 51.2 bits (121), Expect = 2e-06 Identities = 32/80 (40%), Positives = 43/80 (53%), Gaps = 4/80 (5%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRL----EQGDGPIVLILAPTRELAVQIQAEAT 171 D++ A+TGSGKT +++LP + + + L E G P +IL PTRELA QI E Sbjct: 337 DILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGR 396 Query: 172 KFGSYSRTRSTCIYGGAPKG 231 KF S +YGG G Sbjct: 397 KFSYQSVMEIKPVYGGINVG 416
>DDX28_MACFA (Q4R4T6) Probable ATP-dependent RNA helicase DDX28 (EC 3.6.1.-)| (Mitochondrial DEAD box protein 28) Length = 546 Score = 51.2 bits (121), Expect = 2e-06 Identities = 30/60 (50%), Positives = 38/60 (63%), Gaps = 2/60 (3%) Frame = +1 Query: 7 VIGIAETGSGKTLSYILPGLVHVGAQPRLE--QGDGPIVLILAPTRELAVQIQAEATKFG 180 V+ AETGSGKTLSY+LP + QP L+ + P L+L P+RELA Q+QA A G Sbjct: 168 VLCAAETGSGKTLSYLLPLFQRLMVQPSLDSLRIPAPRGLVLVPSRELAQQVQAVAQPLG 227
>ROK1_CRYNE (Q5KDK3) ATP-dependent RNA helicase ROK1 (EC 3.6.1.-)| Length = 620 Score = 51.2 bits (121), Expect = 2e-06 Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 6/70 (8%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPR----LEQGDGPIVLILAPTRELAVQIQA--E 165 D + +A TGSGKTLSY+LP +V + R E+G G L++ PT +LAVQIQ + Sbjct: 162 DTLCVAPTGSGKTLSYVLPTIVKLREPARKLKGTEEGKGVRALVVVPTHDLAVQIQGVIK 221 Query: 166 ATKFGSYSRT 195 A G + R+ Sbjct: 222 AVTMGRHWRS 231
>RRP3_SCHPO (Q9P6N8) ATP-dependent rRNA helicase rrp3 (EC 3.6.1.-)| Length = 465 Score = 51.2 bits (121), Expect = 2e-06 Identities = 30/72 (41%), Positives = 39/72 (54%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DVIG+A+TGSGKT ++ LP + + P ++LAPTRELA QI + G Sbjct: 85 DVIGLAQTGSGKTAAFALPVIQELWNNP-----SPFFAVVLAPTRELAYQISEQFEAIGG 139 Query: 184 YSRTRSTCIYGG 219 RS I GG Sbjct: 140 SIGVRSVVIVGG 151
>RHLB_SALTY (P0A2P0) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 420 Score = 51.2 bits (121), Expect = 2e-06 Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 2/74 (2%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQG--DGPIVLILAPTRELAVQIQAEATKF 177 DV G A+TG+GKT++++ ++ + P ++ + P LI+APTRELAVQI A+A Sbjct: 47 DVAGQAQTGTGKTMAFLTSTFHYLLSHPAIDDRKVNQPRALIMAPTRELAVQIHADAEPL 106 Query: 178 GSYSRTRSTCIYGG 219 + + YGG Sbjct: 107 AQATGLKLGLAYGG 120 Score = 30.0 bits (66), Expect = 5.5 Identities = 18/37 (48%), Positives = 22/37 (59%) Frame = +2 Query: 194 LEAHVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 L V+ + LR +L EF G I+ ATDVAARGL Sbjct: 285 LTGDVAQKKRLR--ILDEFTRGDLDILVATDVAARGL 319
>RHLB_SALTI (P0A2P1) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 420 Score = 51.2 bits (121), Expect = 2e-06 Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 2/74 (2%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQG--DGPIVLILAPTRELAVQIQAEATKF 177 DV G A+TG+GKT++++ ++ + P ++ + P LI+APTRELAVQI A+A Sbjct: 47 DVAGQAQTGTGKTMAFLTSTFHYLLSHPAIDDRKVNQPRALIMAPTRELAVQIHADAEPL 106 Query: 178 GSYSRTRSTCIYGG 219 + + YGG Sbjct: 107 AQATGLKLGLAYGG 120 Score = 30.0 bits (66), Expect = 5.5 Identities = 18/37 (48%), Positives = 22/37 (59%) Frame = +2 Query: 194 LEAHVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 L V+ + LR +L EF G I+ ATDVAARGL Sbjct: 285 LTGDVAQKKRLR--ILDEFTRGDLDILVATDVAARGL 319
>DEAD_BUCAP (Q8K9H6) Cold-shock DEAD box protein A homolog (EC 3.6.1.-)| (ATP-dependent RNA helicase deaD homolog) Length = 601 Score = 51.2 bits (121), Expect = 2e-06 Identities = 27/61 (44%), Positives = 39/61 (63%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DV+G+A+TGSGKT ++ LP L ++ + P +L+LAPTRELAVQ+ + F Sbjct: 45 DVLGMAQTGSGKTAAFSLPLLHNLNINLK-----APQILVLAPTRELAVQVAEAFSDFSK 99 Query: 184 Y 186 Y Sbjct: 100 Y 100 Score = 32.0 bits (71), Expect = 1.4 Identities = 15/27 (55%), Positives = 19/27 (70%) Frame = +2 Query: 224 LRDYVLAEFKNGKSPIMAATDVAARGL 304 LR+ L K+G+ I+ ATDVAARGL Sbjct: 282 LREQTLERLKSGRLDILIATDVAARGL 308
>DEAD_BUCAI (P57453) Cold-shock DEAD box protein A homolog (EC 3.6.1.-)| (ATP-dependent RNA helicase deaD homolog) Length = 601 Score = 51.2 bits (121), Expect = 2e-06 Identities = 27/61 (44%), Positives = 39/61 (63%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DV+G+A+TGSGKT ++ LP L ++ + P +L+LAPTRELAVQ+ + F Sbjct: 45 DVLGMAQTGSGKTAAFSLPLLHNLNINLK-----APQILVLAPTRELAVQVAEAFSDFSK 99 Query: 184 Y 186 Y Sbjct: 100 Y 100 Score = 33.9 bits (76), Expect = 0.38 Identities = 16/27 (59%), Positives = 19/27 (70%) Frame = +2 Query: 224 LRDYVLAEFKNGKSPIMAATDVAARGL 304 LR+ L KNG+ I+ ATDVAARGL Sbjct: 282 LREQTLERLKNGRLDILIATDVAARGL 308
>DED1_YARLI (Q6CB69) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 618 Score = 51.2 bits (121), Expect = 2e-06 Identities = 34/87 (39%), Positives = 43/87 (49%), Gaps = 11/87 (12%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHV---GAQP--------RLEQGDGPIVLILAPTRELAV 150 D++ A+TGSGKT ++ P L G P + + P L+LAPTREL Sbjct: 199 DLMACAQTGSGKTGGFLFPVLSQSFFHGPSPTPQPTGPRHMHKKAYPTALVLAPTRELVS 258 Query: 151 QIQAEATKFGSYSRTRSTCIYGGAPKG 231 QI EA KF S R +YGGA G Sbjct: 259 QIYDEAKKFAYRSWVRPCVVYGGADIG 285 Score = 30.8 bits (68), Expect = 3.2 Identities = 14/26 (53%), Positives = 19/26 (73%) Frame = +2 Query: 227 RDYVLAEFKNGKSPIMAATDVAARGL 304 R+ L F++G +PI+ AT VAARGL Sbjct: 457 RERALEMFRDGTTPILVATAVAARGL 482
>DED1_ASPOR (Q2UGK3) ATP-dependent RNA helicase ded1 (EC 3.6.1.-)| Length = 675 Score = 50.8 bits (120), Expect = 3e-06 Identities = 36/90 (40%), Positives = 42/90 (46%), Gaps = 14/90 (15%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHV---GAQPRLEQGDG-----------PIVLILAPTRE 141 D++ A+TGSGKT ++ P L G P G P LILAPTRE Sbjct: 225 DLMACAQTGSGKTGGFLFPILSQAFQNGPSPTPAPASGQFSYGRQRKAYPTSLILAPTRE 284 Query: 142 LAVQIQAEATKFGSYSRTRSTCIYGGAPKG 231 L QI EA KF S R +YGGA G Sbjct: 285 LVSQIFDEARKFAYRSWVRPCVVYGGADIG 314 Score = 32.3 bits (72), Expect = 1.1 Identities = 15/34 (44%), Positives = 21/34 (61%) Frame = +2 Query: 203 HVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 H + R+ L F++G+ PI+ AT VAARGL Sbjct: 479 HGDRTQRERERALEMFRSGRCPILVATAVAARGL 512
>HAS1_EMENI (Q5BBY1) ATP-dependent RNA helicase has1 (EC 3.6.1.-)| Length = 609 Score = 50.8 bits (120), Expect = 3e-06 Identities = 28/73 (38%), Positives = 46/73 (63%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DV+G A+TGSGKTL++++P + + A R + +G V++++PTRELA+QI A + + Sbjct: 167 DVLGAAKTGSGKTLAFLIPAIEMLSAL-RFKPRNGTGVIVVSPTRELALQIFGVARELLT 225 Query: 184 YSRTRSTCIYGGA 222 + GGA Sbjct: 226 AHSQTYGIVIGGA 238 Score = 32.0 bits (71), Expect = 1.4 Identities = 18/51 (35%), Positives = 24/51 (47%) Frame = +2 Query: 152 KYRQKLQSLDHTRELEAHVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 KY +L + L+ H + R EF N K ++ TDVAARGL Sbjct: 389 KYHAELLNYIDLPVLDLHGKQKQQKRTNTFFEFCNAKQGVLICTDVAARGL 439
>DED1_SCHPO (O13370) ATP-dependent RNA helicase ded1 (EC 3.6.1.-)| Length = 636 Score = 50.8 bits (120), Expect = 3e-06 Identities = 34/89 (38%), Positives = 43/89 (48%), Gaps = 16/89 (17%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGL----------------VHVGAQPRLEQGDGPIVLILAPT 135 D++ A+TGSGKT ++ P L +G +PR P LILAPT Sbjct: 208 DLMACAQTGSGKTAGFLFPILSLAFDKGPAAVPVDQDAGMGYRPRKAY---PTTLILAPT 264 Query: 136 RELAVQIQAEATKFGSYSRTRSTCIYGGA 222 REL QI E+ KF S R +YGGA Sbjct: 265 RELVCQIHEESRKFCYRSWVRPCAVYGGA 293
>DDX28_HUMAN (Q9NUL7) Probable ATP-dependent RNA helicase DDX28 (EC 3.6.1.-)| (Mitochondrial DEAD box protein 28) Length = 540 Score = 50.8 bits (120), Expect = 3e-06 Identities = 30/60 (50%), Positives = 38/60 (63%), Gaps = 2/60 (3%) Frame = +1 Query: 7 VIGIAETGSGKTLSYILPGLVHVGAQPRLEQ--GDGPIVLILAPTRELAVQIQAEATKFG 180 V+ AETGSGKTLSY+LP L + QP L+ P L+L P+RELA Q++A A G Sbjct: 168 VVCAAETGSGKTLSYLLPLLQRLLGQPSLDSLPIPAPRGLVLVPSRELAQQVRAVAQPLG 227
>MAK5_CRYNE (Q5KC99) ATP-dependent RNA helicase MAK5 (EC 3.6.1.-)| Length = 772 Score = 50.8 bits (120), Expect = 3e-06 Identities = 28/53 (52%), Positives = 39/53 (73%), Gaps = 2/53 (3%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQG-DGPI-VLILAPTRELAVQI 156 DV+G+AETGSGKTL+Y LP L ++ Q + + G P+ L+L PTRELA+Q+ Sbjct: 211 DVVGVAETGSGKTLAYSLPILHYLLGQRKSKAGIKRPLSALVLCPTRELALQV 263 Score = 29.6 bits (65), Expect = 7.2 Identities = 16/37 (43%), Positives = 23/37 (62%) Frame = +2 Query: 194 LEAHVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 L +H+ + L++ L FK+ I+ ATDVAARGL Sbjct: 514 LHSHLQQKQRLKN--LDRFKSNPKGILIATDVAARGL 548
>DRS1_SCHPO (Q09903) ATP-dependent RNA helicase drs1 (EC 3.6.1.-)| Length = 754 Score = 50.8 bits (120), Expect = 3e-06 Identities = 30/72 (41%), Positives = 43/72 (59%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 D++G A TGSGKT ++I+P L + +P+ + VLIL PTRELA+Q + ATK S Sbjct: 298 DIVGAAVTGSGKTAAFIVPILERLLYRPK--KVPTTRVLILCPTRELAMQCHSVATKIAS 355 Query: 184 YSRTRSTCIYGG 219 ++ GG Sbjct: 356 FTDIMVCLCIGG 367 Score = 31.2 bits (69), Expect = 2.5 Identities = 15/36 (41%), Positives = 22/36 (61%) Frame = +2 Query: 197 EAHVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 E H S + R L +F++GK + ATDVA+RG+ Sbjct: 533 EIHGSLSQEQRVRALEDFRDGKCNYLLATDVASRGI 568
>HAS1_ASHGO (Q74Z73) ATP-dependent RNA helicase HAS1 (EC 3.6.1.-)| Length = 504 Score = 50.4 bits (119), Expect = 4e-06 Identities = 27/73 (36%), Positives = 45/73 (61%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DV+G A+TGSGKTL+++LP + + + + + +G V+++ PTRELA+QI A + Sbjct: 78 DVLGAAKTGSGKTLAFLLPAIEMLHSL-KFKPRNGTGVIVITPTRELALQIFGVARELME 136 Query: 184 YSRTRSTCIYGGA 222 + + GGA Sbjct: 137 FHSQTFGIVIGGA 149 Score = 31.6 bits (70), Expect = 1.9 Identities = 25/83 (30%), Positives = 37/83 (44%) Frame = +2 Query: 56 YLVWFMLVHNLDSNKVMAQLS*SLLQQENWLFKYRQKLQSLDHTRELEAHVSTVEHLRDY 235 +L+ F + + K++ LS N + Y + L +D LE H + R Sbjct: 274 FLLLFTFLKKFQNKKIIVFLS-----SCNSVKYYAELLNYID-LPVLELHGKQKQQKRTN 327 Query: 236 VLAEFKNGKSPIMAATDVAARGL 304 EF N + I+ TDVAARGL Sbjct: 328 TFFEFCNAERGILVCTDVAARGL 350
>DED1_DEBHA (Q6BU54) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 630 Score = 50.4 bits (119), Expect = 4e-06 Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 10/86 (11%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLV--HVGAQPRLEQGDG--------PIVLILAPTRELAVQ 153 D++ A+TGSGKT ++ P L ++ + + G P L++APTREL Q Sbjct: 195 DLMACAQTGSGKTGGFLFPVLSESYMNGPAEVPETAGAFSSHKVYPTALVMAPTRELVSQ 254 Query: 154 IQAEATKFGSYSRTRSTCIYGGAPKG 231 I EA KF S R + +YGGA G Sbjct: 255 IFDEAKKFAYRSWVRPSVVYGGADIG 280 Score = 35.0 bits (79), Expect = 0.17 Identities = 17/34 (50%), Positives = 22/34 (64%) Frame = +2 Query: 203 HVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 H ++ R+ LA FK G +PI+ AT VAARGL Sbjct: 444 HGDRSQYEREKALAAFKTGTAPILVATAVAARGL 477
>RHLB_MANSM (Q65RG7) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 417 Score = 50.4 bits (119), Expect = 4e-06 Identities = 28/72 (38%), Positives = 43/72 (59%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DV G A+TG+GKT++++ H+ P + + P LI+APTRELAVQI +A + Sbjct: 48 DVAGQAQTGTGKTMAFLTATFHHLLEHP--VKTNHPRALIMAPTRELAVQIAHDAERMVK 105 Query: 184 YSRTRSTCIYGG 219 + ++ YGG Sbjct: 106 TTGLKTALAYGG 117
>RHLB_VIBVU (Q8DDN6) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 435 Score = 50.4 bits (119), Expect = 4e-06 Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 2/74 (2%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLE--QGDGPIVLILAPTRELAVQIQAEATKF 177 D+ G A+TG+GKTL+++ H+ P E Q P +I+APTRELA+QI +A Sbjct: 48 DIAGQAQTGTGKTLAFLTATFNHLLTTPAHEGRQPTQPRAIIMAPTRELAIQIYNDAEPL 107 Query: 178 GSYSRTRSTCIYGG 219 + + ++ YGG Sbjct: 108 IASTGIKAALAYGG 121 Score = 30.4 bits (67), Expect = 4.2 Identities = 13/26 (50%), Positives = 18/26 (69%) Frame = +2 Query: 227 RDYVLAEFKNGKSPIMAATDVAARGL 304 R+ +L +F G ++ ATDVAARGL Sbjct: 295 REKILEQFTQGSVDLLVATDVAARGL 320
>RHLB_SHIFL (P0A8K0) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 420 Score = 50.4 bits (119), Expect = 4e-06 Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 2/74 (2%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRL--EQGDGPIVLILAPTRELAVQIQAEATKF 177 DV G A+TG+GKT++++ ++ + P + + + P LI+APTRELAVQI A+A Sbjct: 47 DVAGQAQTGTGKTMAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPL 106 Query: 178 GSYSRTRSTCIYGG 219 + + YGG Sbjct: 107 AEATGLKLGLAYGG 120 Score = 30.0 bits (66), Expect = 5.5 Identities = 18/37 (48%), Positives = 22/37 (59%) Frame = +2 Query: 194 LEAHVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 L V+ + LR +L EF G I+ ATDVAARGL Sbjct: 285 LTGDVAQKKRLR--ILDEFTRGDLDILVATDVAARGL 319
>RHLB_ECOLI (P0A8J8) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 420 Score = 50.4 bits (119), Expect = 4e-06 Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 2/74 (2%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRL--EQGDGPIVLILAPTRELAVQIQAEATKF 177 DV G A+TG+GKT++++ ++ + P + + + P LI+APTRELAVQI A+A Sbjct: 47 DVAGQAQTGTGKTMAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPL 106 Query: 178 GSYSRTRSTCIYGG 219 + + YGG Sbjct: 107 AEATGLKLGLAYGG 120 Score = 30.0 bits (66), Expect = 5.5 Identities = 18/37 (48%), Positives = 22/37 (59%) Frame = +2 Query: 194 LEAHVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 L V+ + LR +L EF G I+ ATDVAARGL Sbjct: 285 LTGDVAQKKRLR--ILDEFTRGDLDILVATDVAARGL 319
>RHLB_ECOL6 (P0A8J9) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 420 Score = 50.4 bits (119), Expect = 4e-06 Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 2/74 (2%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRL--EQGDGPIVLILAPTRELAVQIQAEATKF 177 DV G A+TG+GKT++++ ++ + P + + + P LI+APTRELAVQI A+A Sbjct: 47 DVAGQAQTGTGKTMAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPL 106 Query: 178 GSYSRTRSTCIYGG 219 + + YGG Sbjct: 107 AEATGLKLGLAYGG 120 Score = 30.0 bits (66), Expect = 5.5 Identities = 18/37 (48%), Positives = 22/37 (59%) Frame = +2 Query: 194 LEAHVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 L V+ + LR +L EF G I+ ATDVAARGL Sbjct: 285 LTGDVAQKKRLR--ILDEFTRGDLDILVATDVAARGL 319
>HAS1_DEBHA (Q6BH93) ATP-dependent RNA helicase HAS1 (EC 3.6.1.-)| Length = 568 Score = 50.1 bits (118), Expect = 5e-06 Identities = 27/73 (36%), Positives = 46/73 (63%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DV+G A+TGSGKTL++++P + + R + +G V++++PTRELA+QI A + + Sbjct: 143 DVLGAAKTGSGKTLAFLIPA-IEMLYSLRFKPRNGTGVVVVSPTRELALQIFGVARELMA 201 Query: 184 YSRTRSTCIYGGA 222 + + GGA Sbjct: 202 HHSQTFGIVIGGA 214
>RRP3_YARLI (Q6CH58) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 480 Score = 50.1 bits (118), Expect = 5e-06 Identities = 29/72 (40%), Positives = 39/72 (54%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 D+IG+A+TGSGKT ++ +P L Q E ++LAPTRELA QI GS Sbjct: 103 DIIGLAQTGSGKTAAFAIPVL-----QSLYENPQPLYCVVLAPTRELAYQISETFEALGS 157 Query: 184 YSRTRSTCIYGG 219 R+ + GG Sbjct: 158 AMGLRTAVVVGG 169
>RHLB_HAEIN (P44922) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 415 Score = 50.1 bits (118), Expect = 5e-06 Identities = 31/74 (41%), Positives = 42/74 (56%), Gaps = 2/74 (2%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHV--GAQPRLEQGDGPIVLILAPTRELAVQIQAEATKF 177 DV G A+TG+GKT++++ H+ P L+ P LILAPTRELAVQI +A Sbjct: 48 DVAGQAQTGTGKTMAFLTATFHHLLTHQDPNLKYPH-PRALILAPTRELAVQISNDAEFL 106 Query: 178 GSYSRTRSTCIYGG 219 S ++ YGG Sbjct: 107 AKASGLKTALAYGG 120
>RHLB_ERWCT (Q6CZD9) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 429 Score = 50.1 bits (118), Expect = 5e-06 Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 2/74 (2%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRL--EQGDGPIVLILAPTRELAVQIQAEATKF 177 DV G A+TG+GKTL+++ ++ + P Q + P LI+APTRELAVQI ++A Sbjct: 47 DVAGQAQTGTGKTLAFLASTFHYLLSHPANAERQTNQPRALIMAPTRELAVQIHSDAEAL 106 Query: 178 GSYSRTRSTCIYGG 219 + + YGG Sbjct: 107 SHLTGLKLGLAYGG 120 Score = 30.8 bits (68), Expect = 3.2 Identities = 18/37 (48%), Positives = 22/37 (59%) Frame = +2 Query: 194 LEAHVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 L V+ + LR +L EF G I+ ATDVAARGL Sbjct: 285 LTGDVAQKKRLR--ILEEFTQGSIDILVATDVAARGL 319
>RHLB_VIBPA (Q87KH5) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 437 Score = 50.1 bits (118), Expect = 5e-06 Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 2/74 (2%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLE--QGDGPIVLILAPTRELAVQIQAEATKF 177 D+ G A+TG+GKTL+++ H+ P E Q P +I+APTRELA+QI +A Sbjct: 48 DIAGQAQTGTGKTLAFLTATFNHLLTTPEHEGRQPTQPRAIIMAPTRELAIQIFNDAEPL 107 Query: 178 GSYSRTRSTCIYGG 219 + + ++ YGG Sbjct: 108 IASTGLKAALAYGG 121 Score = 30.8 bits (68), Expect = 3.2 Identities = 14/26 (53%), Positives = 18/26 (69%) Frame = +2 Query: 227 RDYVLAEFKNGKSPIMAATDVAARGL 304 R+ +L +F G I+ ATDVAARGL Sbjct: 295 REKILEQFTKGDVDILVATDVAARGL 320
>DBP3_CANGA (Q6FS54) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 540 Score = 50.1 bits (118), Expect = 5e-06 Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 3/78 (3%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILP---GLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATK 174 DVIG+AETGSGKT ++ +P L+ ++P+ G VL+++PTRELA QI Sbjct: 167 DVIGVAETGSGKTFAFGVPAINNLLTSSSKPK-----GIKVLVISPTRELASQIYDNLVL 221 Query: 175 FGSYSRTRSTCIYGGAPK 228 +YGG PK Sbjct: 222 LTQKVGIDCCVVYGGVPK 239 Score = 36.2 bits (82), Expect = 0.077 Identities = 18/34 (52%), Positives = 22/34 (64%) Frame = +2 Query: 203 HVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 H + R L EFK+GKS ++ ATDVAARGL Sbjct: 407 HGDLSQQQRTQALNEFKSGKSNLLLATDVAARGL 440
>DBP8_YEAST (P38719) ATP-dependent RNA helicase DBP8 (EC 3.6.1.-) (DEAD box| protein 8) Length = 431 Score = 49.7 bits (117), Expect = 7e-06 Identities = 30/72 (41%), Positives = 39/72 (54%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 D IG A+TGSGKT+++ P L P G ++L PTRELA+QI + T GS Sbjct: 41 DCIGGAKTGSGKTIAFAGPMLTKWSEDP-----SGMFGVVLTPTRELAMQIAEQFTALGS 95 Query: 184 YSRTRSTCIYGG 219 R + I GG Sbjct: 96 SMNIRVSVIVGG 107
>HAS1_KLULA (Q6CXB7) ATP-dependent RNA helicase HAS1 (EC 3.6.1.-)| Length = 497 Score = 49.7 bits (117), Expect = 7e-06 Identities = 26/73 (35%), Positives = 45/73 (61%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DV+G A+TGSGKTL++++P + + + + + +G V+++ PTRELA+QI A + Sbjct: 73 DVLGAAKTGSGKTLAFLIPAIEMLHSL-KFKPRNGTGVIVITPTRELALQIFGVARELME 131 Query: 184 YSRTRSTCIYGGA 222 + + GGA Sbjct: 132 FHSQTFGIVIGGA 144 Score = 31.2 bits (69), Expect = 2.5 Identities = 19/51 (37%), Positives = 24/51 (47%) Frame = +2 Query: 152 KYRQKLQSLDHTRELEAHVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 KY +L + LE H + R EF N + I+ TDVAARGL Sbjct: 295 KYYAELLNYIDLPVLELHGKQKQQKRTNTFFEFCNAERGILVCTDVAARGL 345
>DDX47_MOUSE (Q9CWX9) Probable ATP-dependent RNA helicase DDX47 (EC 3.6.1.-)| (DEAD box protein 47) Length = 455 Score = 49.7 bits (117), Expect = 7e-06 Identities = 31/72 (43%), Positives = 38/72 (52%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 D+IG+AETGSGKT ++ LP L LE L+L PTRELA QI + GS Sbjct: 63 DIIGLAETGSGKTGAFALPIL-----NALLETPQRLFALVLTPTRELAFQISEQFEALGS 117 Query: 184 YSRTRSTCIYGG 219 + I GG Sbjct: 118 SIGVQCAVIVGG 129
>MAK5_EMENI (Q5BCI0) ATP-dependent RNA helicase mak5 (EC 3.6.1.-)| Length = 770 Score = 49.7 bits (117), Expect = 7e-06 Identities = 31/59 (52%), Positives = 37/59 (62%), Gaps = 7/59 (11%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDG-------PIVLILAPTRELAVQIQ 159 DVIG A TGSGKTL++ LP L H + R + D PI LIL+PTRELA Q+Q Sbjct: 236 DVIGKASTGSGKTLAFGLPILEHYLERERRKTIDSEEEKEKIPIALILSPTRELAHQLQ 294
>YQFR_BACSU (P54475) Probable ATP-dependent RNA helicase yqfR (EC 3.6.1.-)| Length = 438 Score = 49.7 bits (117), Expect = 7e-06 Identities = 34/77 (44%), Positives = 43/77 (55%), Gaps = 3/77 (3%) Frame = +1 Query: 7 VIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKF--- 177 VIG ++TG+GKT +Y+LP L + + Q V+I APTRELA QI EA K Sbjct: 44 VIGQSQTGTGKTHAYLLPLLNKIDPAKDVVQ-----VVITAPTRELANQIYQEALKITQG 98 Query: 178 GSYSRTRSTCIYGGAPK 228 S+ RS C GG K Sbjct: 99 EEGSQIRSKCFIGGTDK 115
>DBP9_ASPFU (Q4X0C2) ATP-dependent RNA helicase dbp9 (EC 3.6.1.-)| Length = 649 Score = 49.7 bits (117), Expect = 7e-06 Identities = 29/65 (44%), Positives = 40/65 (61%), Gaps = 4/65 (6%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHV----GAQPRLEQGDGPIVLILAPTRELAVQIQAEAT 171 D++ A+TGSGKT +Y+LP L + A P L+ G LIL PTRELA Q+Q+ Sbjct: 96 DILARAKTGSGKTAAYVLPILQTILQKKAADPSLKATTG---LILVPTRELAEQVQSVII 152 Query: 172 KFGSY 186 KF ++ Sbjct: 153 KFSAF 157
>DBP3_CANAL (Q5APT8) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 564 Score = 49.7 bits (117), Expect = 7e-06 Identities = 30/78 (38%), Positives = 42/78 (53%), Gaps = 3/78 (3%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILP---GLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATK 174 DVIG+AETGSGKT ++ +P ++ G L VL ++PTRELA+QI + Sbjct: 192 DVIGVAETGSGKTFAFGVPAINNIITTGNTKTLS------VLCISPTRELALQIYDNLIE 245 Query: 175 FGSYSRTRSTCIYGGAPK 228 + S +YGG K Sbjct: 246 LTADSGVNCVAVYGGVSK 263 Score = 33.5 bits (75), Expect = 0.50 Identities = 17/46 (36%), Positives = 29/46 (63%) Frame = +2 Query: 203 HVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGLGMVTCLNIRIML 340 H + R L+ FK+G+S ++ ATDVAARGL + N+++++ Sbjct: 431 HGDLSQQQRTAALSAFKSGQSNLLLATDVAARGLDIP---NVKVVI 473
>DBP4_SCHPO (Q9UTP9) ATP-dependent RNA helicase dbp4 (EC 3.6.1.-)| Length = 735 Score = 49.3 bits (116), Expect = 9e-06 Identities = 28/72 (38%), Positives = 42/72 (58%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 D++G A+TGSGKTL++I+P L+ + + DG L+++PTRELA+Q K G Sbjct: 78 DILGAAKTGSGKTLAFIVP-LIENLYRKKWTSLDGLGALVISPTRELAIQTFETLVKIGR 136 Query: 184 YSRTRSTCIYGG 219 + I GG Sbjct: 137 LHSFSAGLIIGG 148
>DBP4_GIBZE (Q4IAS1) ATP-dependent RNA helicase DBP4 (EC 3.6.1.-)| Length = 793 Score = 49.3 bits (116), Expect = 9e-06 Identities = 28/72 (38%), Positives = 44/72 (61%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 D++G A+TGSGKTL++++P L + + + + DG LI++PTRELA QI K G+ Sbjct: 90 DILGAAKTGSGKTLAFLIPVLEKL-YRAQWTEFDGLGALIISPTRELAAQIFEVLRKVGT 148 Query: 184 YSRTRSTCIYGG 219 + + GG Sbjct: 149 KHSFSAGLVIGG 160
>DBP10_CANAL (Q5ANB2) ATP-dependent RNA helicase DBP10 (EC 3.6.1.-)| Length = 908 Score = 49.3 bits (116), Expect = 9e-06 Identities = 26/72 (36%), Positives = 43/72 (59%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DV+G+A TGSGKT +++LP + + + Q G +IL+P+RELA+Q + +F Sbjct: 138 DVVGMARTGSGKTAAFVLPLIERL----KSRQPGGVRAVILSPSRELALQTYKQVKEFSH 193 Query: 184 YSRTRSTCIYGG 219 + +S + GG Sbjct: 194 GTNLQSIVLIGG 205 Score = 30.4 bits (67), Expect = 4.2 Identities = 13/37 (35%), Positives = 22/37 (59%) Frame = +2 Query: 218 EHLRDYVLAEFKNGKSPIMAATDVAARGLGMVTCLNI 328 +H R L +F+ G + ++ TDVAARG+ + N+ Sbjct: 430 QHARKNQLYQFRVGLTNVLVVTDVAARGIDIPVLANV 466
>DBPA_BACSU (P42305) ATP-dependent RNA helicase dbpA (EC 3.6.1.-)| Length = 479 Score = 49.3 bits (116), Expect = 9e-06 Identities = 27/71 (38%), Positives = 43/71 (60%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 D++ ++TGSGKT S+ +P L + + P LIL PTRELAVQ++ + T G Sbjct: 41 DLVVKSQTGSGKTASFGIP-LCELANWDE----NKPQALILTPTRELAVQVKEDITNIGR 95 Query: 184 YSRTRSTCIYG 216 + R ++T ++G Sbjct: 96 FKRIKATAVFG 106 Score = 31.2 bits (69), Expect = 2.5 Identities = 18/50 (36%), Positives = 29/50 (58%) Frame = +2 Query: 203 HVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGLGMVTCLNIRIML*FQL 352 H ++ R V+ EFK G+ + ATDVAARG+ + NI +++ + L Sbjct: 271 HGGMIQEDRFDVMNEFKRGEYRYLVATDVAARGIDIE---NISLVINYDL 317
>DRS1_ASPOR (Q2UQI6) ATP-dependent RNA helicase drs1 (EC 3.6.1.-)| Length = 820 Score = 49.3 bits (116), Expect = 9e-06 Identities = 30/72 (41%), Positives = 41/72 (56%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 D++G A TGSGKT ++++P L + +PR V IL PTRELAVQ ATK + Sbjct: 341 DIVGSAVTGSGKTAAFVVPILERLLFRPRKVPTSR--VAILMPTRELAVQCYNVATKLAT 398 Query: 184 YSRTRSTCIYGG 219 Y+ + GG Sbjct: 399 YTDITFCQLVGG 410 Score = 30.4 bits (67), Expect = 4.2 Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 3/46 (6%) Frame = +2 Query: 197 EAHVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL---GMVTCLN 325 E H S + R + F+ GK + ATD+AARGL G+ T +N Sbjct: 576 ELHGSMSQEQRIRSVENFREGKVSFLLATDLAARGLDIKGVETVIN 621
>DDX31_HUMAN (Q9H8H2) Probable ATP-dependent RNA helicase DDX31 (EC 3.6.1.-)| (DEAD box protein 31) (Helicain) Length = 851 Score = 48.9 bits (115), Expect = 1e-05 Identities = 23/51 (45%), Positives = 37/51 (72%), Gaps = 1/51 (1%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGA-QPRLEQGDGPIVLILAPTRELAVQ 153 D + ++TGSGKTL+Y +P + + A + ++++ DGP L+L PTRELA+Q Sbjct: 270 DALVRSQTGSGKTLAYCIPVVQSLQAMESKIQRSDGPYALVLVPTRELALQ 320
>HAS1_YEAST (Q03532) ATP-dependent RNA helicase HAS1 (EC 3.6.1.-) (Helicase| associated with SET1 protein 1) Length = 505 Score = 48.9 bits (115), Expect = 1e-05 Identities = 25/73 (34%), Positives = 44/73 (60%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DV+G A+TGSGKTL++++P + + + + +G ++++ PTRELA+QI A + Sbjct: 81 DVLGAAKTGSGKTLAFLIPA-IELLHSLKFKPRNGTGIIVITPTRELALQIFGVARELME 139 Query: 184 YSRTRSTCIYGGA 222 + + GGA Sbjct: 140 FHSQTFGIVIGGA 152 Score = 30.8 bits (68), Expect = 3.2 Identities = 19/51 (37%), Positives = 24/51 (47%) Frame = +2 Query: 152 KYRQKLQSLDHTRELEAHVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 KY +L + LE H + R EF N + I+ TDVAARGL Sbjct: 303 KYYAELLNYIDLPVLELHGKQKQQKRTNTFFEFCNAERGILICTDVAARGL 353
>IF4A_CRYPV (O02494) Eukaryotic initiation factor 4A (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A) (eIF-4A) Length = 405 Score = 48.5 bits (114), Expect = 1e-05 Identities = 29/72 (40%), Positives = 38/72 (52%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 D IG A++G+GKT ++++ L + Q VL+LAPTRELA QIQ A G Sbjct: 70 DTIGQAQSGTGKTATFVIAALQKIDYSLNACQ-----VLLLAPTRELAQQIQKVALALGD 124 Query: 184 YSRTRSTCIYGG 219 Y R GG Sbjct: 125 YCELRCHACVGG 136
>DED1_GIBZE (Q4I7K4) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 675 Score = 48.5 bits (114), Expect = 1e-05 Identities = 33/88 (37%), Positives = 43/88 (48%), Gaps = 12/88 (13%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGL------------VHVGAQPRLEQGDGPIVLILAPTRELA 147 D++ A+TGSGKT ++ P L + Q ++ P LILAPTREL Sbjct: 225 DLMACAQTGSGKTGGFLFPILSQAFINGPSAVPANAAGQFGRQRKAYPTSLILAPTRELV 284 Query: 148 VQIQAEATKFGSYSRTRSTCIYGGAPKG 231 QI E+ KF S R +YGGA G Sbjct: 285 SQIFDESRKFAYRSWVRPCVVYGGADIG 312 Score = 33.9 bits (76), Expect = 0.38 Identities = 16/34 (47%), Positives = 21/34 (61%) Frame = +2 Query: 203 HVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 H + R+ L F+NG+ PI+ AT VAARGL Sbjct: 476 HGDRTQRERERALEFFRNGRCPILVATAVAARGL 509
>HAS1_CANGA (Q6FIL3) ATP-dependent RNA helicase HAS1 (EC 3.6.1.-)| Length = 494 Score = 48.5 bits (114), Expect = 1e-05 Identities = 27/73 (36%), Positives = 43/73 (58%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DV+G A+TGSGKTL+++LP + + + + +G V+I+ PTRELA+QI + Sbjct: 68 DVLGAAKTGSGKTLAFLLP-TIELLHSLKFKPRNGTGVIIITPTRELALQIFGVVRELME 126 Query: 184 YSRTRSTCIYGGA 222 + + GGA Sbjct: 127 FHSQTFGIVIGGA 139 Score = 30.8 bits (68), Expect = 3.2 Identities = 19/51 (37%), Positives = 24/51 (47%) Frame = +2 Query: 152 KYRQKLQSLDHTRELEAHVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 KY +L + LE H + R EF N + I+ TDVAARGL Sbjct: 290 KYYAELLNYIDLPVLELHGKQKQQKRTNTFFEFCNAERGILICTDVAARGL 340
>DDX50_HUMAN (Q9BQ39) ATP-dependent RNA helicase DDX50 (EC 3.6.1.-) (DEAD box| protein 50) (Nucleolar protein Gu2) (Gu-beta) Length = 737 Score = 48.5 bits (114), Expect = 1e-05 Identities = 31/74 (41%), Positives = 43/74 (58%), Gaps = 2/74 (2%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGA-QPRLEQGDGPIVLILAPTRELAVQIQAEATKFG 180 D+I A TG+GKT S+ +P + + Q +++ P VL+LAPTRELA Q+ A F Sbjct: 176 DLIAQARTGTGKTFSFAIPLIERLQRNQETIKKSRSPKVLVLAPTRELANQV---AKDFK 232 Query: 181 SYSRTRS-TCIYGG 219 +R S C YGG Sbjct: 233 DITRKLSVACFYGG 246
>DDX54_MOUSE (Q8K4L0) ATP-dependent RNA helicase DDX54 (EC 3.6.1.-) (DEAD box| protein 54) Length = 874 Score = 48.5 bits (114), Expect = 1e-05 Identities = 27/72 (37%), Positives = 40/72 (55%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DV+ +A TGSGKT ++LP + A+ G LIL+PTRELA+Q + G Sbjct: 134 DVVAMARTGSGKTACFLLPMFERLKAR---SAQTGARALILSPTRELALQTMKFTKELGK 190 Query: 184 YSRTRSTCIYGG 219 ++ ++ I GG Sbjct: 191 FTGLKTALILGG 202
>DBP8_DEBHA (Q6BGU8) ATP-dependent RNA helicase DBP8 (EC 3.6.1.-)| Length = 441 Score = 48.5 bits (114), Expect = 1e-05 Identities = 29/72 (40%), Positives = 38/72 (52%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 D IG A+TGSGKT+++ P L P G L+L PTRELA+QI + GS Sbjct: 40 DCIGGAKTGSGKTIAFAAPMLTQWSEDP-----SGIYGLVLTPTRELALQIAEQFAALGS 94 Query: 184 YSRTRSTCIYGG 219 + + I GG Sbjct: 95 SMNIKVSVIVGG 106 Score = 30.4 bits (67), Expect = 4.2 Identities = 20/53 (37%), Positives = 28/53 (52%) Frame = +2 Query: 158 RQKLQSLDHTRELEAHVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGLGMVT 316 R+ L+ L+ R H + R L FK G + I+ ATDVA+RGL + T Sbjct: 270 RRTLRKLEF-RVASLHSEMPQTERTNSLHRFKAGAAKILIATDVASRGLDIPT 321
>YN21_CAEEL (P34580) Putative ATP-dependent RNA helicase T26G10.1 in chromosome| III (EC 3.6.1.-) Length = 489 Score = 48.5 bits (114), Expect = 1e-05 Identities = 31/72 (43%), Positives = 39/72 (54%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DVIG+AETGSGKT ++ +P L Q L+ L+L PTRELA QI + GS Sbjct: 83 DVIGLAETGSGKTGAFAIPVL-----QSLLDHPQAFFCLVLTPTRELAFQIGQQFEALGS 137 Query: 184 YSRTRSTCIYGG 219 + I GG Sbjct: 138 GIGLIAAVIVGG 149
>DDX50_MOUSE (Q99MJ9) ATP-dependent RNA helicase DDX50 (EC 3.6.1.-) (DEAD box| protein 50) (Nucleolar protein Gu2) (Gu-beta) Length = 734 Score = 48.5 bits (114), Expect = 1e-05 Identities = 31/74 (41%), Positives = 43/74 (58%), Gaps = 2/74 (2%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGA-QPRLEQGDGPIVLILAPTRELAVQIQAEATKFG 180 D+I A TG+GKT S+ +P + + Q +++ P VL+LAPTRELA Q+ A F Sbjct: 173 DLIAQARTGTGKTFSFAIPLIERLQRNQETIKKSRSPKVLVLAPTRELANQV---AKDFK 229 Query: 181 SYSRTRS-TCIYGG 219 +R S C YGG Sbjct: 230 DITRKLSVACFYGG 243
>RHLB_ECO57 (Q8XAT4) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 420 Score = 48.5 bits (114), Expect = 1e-05 Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 2/74 (2%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRL--EQGDGPIVLILAPTRELAVQIQAEATKF 177 DV G A+TG+GKT++++ + + P + + + P LI+APTRELAVQI A+A Sbjct: 47 DVAGQAQTGTGKTMAFLTSTFHCLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPL 106 Query: 178 GSYSRTRSTCIYGG 219 + + YGG Sbjct: 107 AEATGLKLGLAYGG 120 Score = 30.0 bits (66), Expect = 5.5 Identities = 18/37 (48%), Positives = 22/37 (59%) Frame = +2 Query: 194 LEAHVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 L V+ + LR +L EF G I+ ATDVAARGL Sbjct: 285 LTGDVAQKKRLR--ILDEFTRGDLDILVATDVAARGL 319
>DED1_KLULA (Q6CLR3) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 627 Score = 48.5 bits (114), Expect = 1e-05 Identities = 31/83 (37%), Positives = 41/83 (49%), Gaps = 10/83 (12%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDG----------PIVLILAPTRELAVQ 153 D++ A+TGSGKT ++ P L + + P +ILAPTRELA Q Sbjct: 198 DLMACAQTGSGKTGGFLFPVLSESFSSGPASTPEAAGNSYIKKVYPTAVILAPTRELATQ 257 Query: 154 IQAEATKFGSYSRTRSTCIYGGA 222 I EA KF S + +YGGA Sbjct: 258 IYDEAKKFTYRSWVKPMVVYGGA 280 Score = 31.2 bits (69), Expect = 2.5 Identities = 15/34 (44%), Positives = 21/34 (61%) Frame = +2 Query: 203 HVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 H + R+ L+ FK G++ I+ AT VAARGL Sbjct: 447 HGDRTQGERERALSAFKTGRATILVATAVAARGL 480
>DED1_ASHGO (Q75B50) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 623 Score = 48.5 bits (114), Expect = 1e-05 Identities = 31/82 (37%), Positives = 41/82 (50%), Gaps = 9/82 (10%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDG---------PIVLILAPTRELAVQI 156 D++ A+TGSGKT ++ P L + D P ++LAPTRELA QI Sbjct: 185 DLMACAQTGSGKTGGFLFPVLSQSFSNGPASTPDESGYYMRKAYPTAVVLAPTRELATQI 244 Query: 157 QAEATKFGSYSRTRSTCIYGGA 222 EA KF S + +YGGA Sbjct: 245 FDEAKKFTYRSWVKPCVVYGGA 266 Score = 29.6 bits (65), Expect = 7.2 Identities = 14/34 (41%), Positives = 21/34 (61%) Frame = +2 Query: 203 HVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 H + R+ LA F+ G++ ++ AT VAARGL Sbjct: 433 HGDRTQAERERALAFFRTGRANVLVATAVAARGL 466
>DDX28_MOUSE (Q9CWT6) Probable ATP-dependent RNA helicase DDX28 (EC 3.6.1.-)| (Mitochondrial DEAD box protein 28) Length = 540 Score = 48.1 bits (113), Expect = 2e-05 Identities = 28/58 (48%), Positives = 34/58 (58%), Gaps = 2/58 (3%) Frame = +1 Query: 19 AETGSGKTLSYILPGLVHV--GAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSY 186 AETGSGKTLSY+LP + G+ P L+L P+RELA Q+QA A G Y Sbjct: 172 AETGSGKTLSYLLPLFQRLLRGSDLDSRSFTAPRGLVLVPSRELAEQVQAVAQSLGGY 229
>DBP10_SCHPO (Q09719) ATP-dependent RNA helicase dbp10 (EC 3.6.1.-)| Length = 848 Score = 48.1 bits (113), Expect = 2e-05 Identities = 27/72 (37%), Positives = 39/72 (54%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DV+G+A TGSGKT ++++P + H+ + LIL+P RELA+Q F Sbjct: 108 DVVGMARTGSGKTAAFVIPMIEHLKS---TLANSNTRALILSPNRELALQTVKVVKDFSK 164 Query: 184 YSRTRSTCIYGG 219 + RS I GG Sbjct: 165 GTDLRSVAIVGG 176
>HAS1_CRYNE (Q5KMN6) ATP-dependent RNA helicase HAS1 (EC 3.6.1.-)| Length = 607 Score = 48.1 bits (113), Expect = 2e-05 Identities = 28/73 (38%), Positives = 44/73 (60%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DV+G A TGSGKT+++++P V + + R + +G V+I++PTRELA+QI A + Sbjct: 168 DVLGAARTGSGKTMAFLIPS-VELLSTLRFKPVNGTGVIIISPTRELALQIFGVAKELMQ 226 Query: 184 YSRTRSTCIYGGA 222 + GGA Sbjct: 227 GHSQTFGVLMGGA 239 Score = 30.8 bits (68), Expect = 3.2 Identities = 18/51 (35%), Positives = 24/51 (47%) Frame = +2 Query: 152 KYRQKLQSLDHTRELEAHVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 KY +L + L+ H + R EF N + I+ TDVAARGL Sbjct: 390 KYHAELLNYIDVPVLDLHGKQKQQKRTNTFFEFINAPAGILLCTDVAARGL 440
>HAS1_YARLI (Q6C7D2) ATP-dependent RNA helicase HAS1 (EC 3.6.1.-)| Length = 605 Score = 48.1 bits (113), Expect = 2e-05 Identities = 27/72 (37%), Positives = 47/72 (65%), Gaps = 1/72 (1%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATK-FG 180 DV+G A+TGSGKTL++++P + + + + + +G V++++PTRELA+QI A Sbjct: 170 DVLGAAKTGSGKTLAFLIPA-IEMLRKLKFKPRNGTGVIVVSPTRELALQIYGVARDLMA 228 Query: 181 SYSRTRSTCIYG 216 ++S+T I G Sbjct: 229 NHSQTLGIVIGG 240 Score = 30.0 bits (66), Expect = 5.5 Identities = 15/37 (40%), Positives = 19/37 (51%) Frame = +2 Query: 194 LEAHVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 L+ H + R EF N K ++ TDVAARGL Sbjct: 405 LDLHGKQKQQKRTNTFFEFINAKQGVLICTDVAARGL 441
>RHLB_VIBCH (Q9KV52) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 438 Score = 48.1 bits (113), Expect = 2e-05 Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 2/74 (2%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLE--QGDGPIVLILAPTRELAVQIQAEATKF 177 D+ G A+TG+GKTL+++ H+ P E P +I+APTRELA+QI +A Sbjct: 48 DIAGQAQTGTGKTLAFLTATFNHLLTTPAAEGRAETQPRAIIMAPTRELAIQIFNDAEPL 107 Query: 178 GSYSRTRSTCIYGG 219 + + ++ YGG Sbjct: 108 LASTGLKAALAYGG 121 Score = 30.8 bits (68), Expect = 3.2 Identities = 14/26 (53%), Positives = 18/26 (69%) Frame = +2 Query: 227 RDYVLAEFKNGKSPIMAATDVAARGL 304 R+ +L +F G I+ ATDVAARGL Sbjct: 295 RERILEQFTQGDVDILVATDVAARGL 320
>ABS_DROME (Q9V3C0) ATP-dependent RNA helicase abstrakt (EC 3.6.1.-) (DEAD box| protein abstrakt) Length = 619 Score = 47.8 bits (112), Expect = 3e-05 Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 9/83 (10%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQP---RLEQGDGPIVLILAPTRELAVQIQAEATK 174 D+IGIA TGSGKTL ++LP ++ Q E+ +GP LI+ P+RELA Q Sbjct: 216 DLIGIAFTGSGKTLVFVLPVIMFALEQEYSLPFERNEGPYGLIICPSRELAKQTHEIIQH 275 Query: 175 FGSYSRT------RSTCIYGGAP 225 + + + RS GG P Sbjct: 276 YSKHLQACGMPEIRSCLAMGGLP 298
>DBP7_GIBZE (Q4HZ68) ATP-dependent RNA helicase DBP7 (EC 3.6.1.-)| Length = 744 Score = 47.8 bits (112), Expect = 3e-05 Identities = 35/85 (41%), Positives = 44/85 (51%), Gaps = 8/85 (9%) Frame = +1 Query: 19 AETGSGKTLSYILPGLVHV-------GAQPRLEQGDGPIVLILAPTRELAVQIQAEATK- 174 AETGSGKTL+Y+LP L V GAQ + + G +I+APTRELA Q+ K Sbjct: 195 AETGSGKTLAYLLPILHRVLLLSVKGGAQ--IHRDSGAFAIIVAPTRELAKQVHTVLEKL 252 Query: 175 FGSYSRTRSTCIYGGAPKGLCSGRV 249 + ST I GG K R+ Sbjct: 253 IRPFPWLVSTAITGGESKKAEKARI 277
>HAS1_NEUCR (Q7S2N9) ATP-dependent RNA helicase has-1 (EC 3.6.1.-)| Length = 578 Score = 47.8 bits (112), Expect = 3e-05 Identities = 26/73 (35%), Positives = 43/73 (58%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DV+G A+TGSGKTL++++P + + + R + +G +++ PTRELA+QI A + Sbjct: 146 DVLGAAKTGSGKTLAFLIPA-IEMLSSLRFKPRNGTGAIVVTPTRELALQIFGVARELMK 204 Query: 184 YSRTRSTCIYGGA 222 + GGA Sbjct: 205 NHSQTYGVVIGGA 217 Score = 32.3 bits (72), Expect = 1.1 Identities = 25/83 (30%), Positives = 37/83 (44%) Frame = +2 Query: 56 YLVWFMLVHNLDSNKVMAQLS*SLLQQENWLFKYRQKLQSLDHTRELEAHVSTVEHLRDY 235 +L+ F + + KV+ S N + Y + LQ +D + L+ H + R Sbjct: 341 FLLLFSFLKKMQKKKVIVFFS-----SCNSVKYYSELLQYID-LQVLDLHGKQKQQKRTN 394 Query: 236 VLAEFKNGKSPIMAATDVAARGL 304 EF N K + TDVAARGL Sbjct: 395 TFFEFCNAKQGTLICTDVAARGL 417
>DBP10_NEUCR (Q7S9J4) ATP-dependent RNA helicase dbp-10 (EC 3.6.1.-)| Length = 934 Score = 47.8 bits (112), Expect = 3e-05 Identities = 26/73 (35%), Positives = 44/73 (60%), Gaps = 1/73 (1%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHV-GAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFG 180 DV+G+A TGSGKT ++++P + + G PR+ G LI++P+RELA+Q + G Sbjct: 138 DVVGMARTGSGKTAAFVIPMIERLKGHSPRV----GSRALIMSPSRELALQTLKVVKELG 193 Query: 181 SYSRTRSTCIYGG 219 + ++ + GG Sbjct: 194 RGTDLKTVLLVGG 206 Score = 30.0 bits (66), Expect = 5.5 Identities = 12/27 (44%), Positives = 18/27 (66%) Frame = +2 Query: 248 FKNGKSPIMAATDVAARGLGMVTCLNI 328 F+ G++ I+ TDVAARG+ M N+ Sbjct: 420 FRRGRTHILVVTDVAARGIDMPALANV 446
>DDX10_MOUSE (Q80Y44) Probable ATP-dependent RNA helicase DDX10 (EC 3.6.1.-)| (DEAD box protein 10) Length = 875 Score = 47.4 bits (111), Expect = 3e-05 Identities = 33/74 (44%), Positives = 43/74 (58%), Gaps = 2/74 (2%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLE--QGDGPIVLILAPTRELAVQIQAEATKF 177 DV+G A+TGSGKTL++++P L A RL+ DG VLI++PTRELA Q K Sbjct: 108 DVLGAAKTGSGKTLAFLVPVL---EALYRLQWTSTDGLGVLIISPTRELAYQTFEVLRKV 164 Query: 178 GSYSRTRSTCIYGG 219 G + I GG Sbjct: 165 GKNHDFSAGLIIGG 178
>DDX10_HUMAN (Q13206) Probable ATP-dependent RNA helicase DDX10 (EC 3.6.1.-)| (DEAD box protein 10) Length = 875 Score = 47.4 bits (111), Expect = 3e-05 Identities = 33/74 (44%), Positives = 43/74 (58%), Gaps = 2/74 (2%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLE--QGDGPIVLILAPTRELAVQIQAEATKF 177 DV+G A+TGSGKTL++++P L A RL+ DG VLI++PTRELA Q K Sbjct: 108 DVLGAAKTGSGKTLAFLVPVL---EALYRLQWTSTDGLGVLIISPTRELAYQTFEVLRKV 164 Query: 178 GSYSRTRSTCIYGG 219 G + I GG Sbjct: 165 GKNHDFSAGLIIGG 178
>DBP4_YARLI (Q6CGD1) ATP-dependent RNA helicase DBP4 (EC 3.6.1.-)| Length = 740 Score = 47.4 bits (111), Expect = 3e-05 Identities = 27/72 (37%), Positives = 42/72 (58%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 D++G A TGSGKTL++++P ++ + + DG L+++PTRELAVQI K G Sbjct: 78 DLLGAARTGSGKTLAFLVP-VLECLFRNKWSDVDGLGALVISPTRELAVQIFQVLRKIGR 136 Query: 184 YSRTRSTCIYGG 219 + + GG Sbjct: 137 CHSFSAGLVIGG 148
>DRS1_CRYNE (Q5KIK3) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 808 Score = 47.4 bits (111), Expect = 3e-05 Identities = 25/53 (47%), Positives = 36/53 (67%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQA 162 D++G A TGSGKT ++++P L + + R + G VL+L PTRELAVQ +A Sbjct: 261 DILGSAVTGSGKTAAFMVPILERLCYRDRGKGGAACRVLVLCPTRELAVQCEA 313
>RHLB_VIBVY (Q7MGP7) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 435 Score = 47.4 bits (111), Expect = 3e-05 Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 7/79 (8%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYI-------LPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQA 162 D+ G A+TG+GKTL+++ L H G QP P +I+APTRELA+QI Sbjct: 48 DIAGQAQTGTGKTLAFLTATFNHLLTTHAHEGRQPTQ-----PRAIIMAPTRELAIQIYN 102 Query: 163 EATKFGSYSRTRSTCIYGG 219 +A + + ++ YGG Sbjct: 103 DAEPLIASTGIKAALAYGG 121 Score = 30.4 bits (67), Expect = 4.2 Identities = 13/26 (50%), Positives = 18/26 (69%) Frame = +2 Query: 227 RDYVLAEFKNGKSPIMAATDVAARGL 304 R+ +L +F G ++ ATDVAARGL Sbjct: 295 REKILEQFTQGSVDLLVATDVAARGL 320
>DRS1_ASPFU (Q4WRV2) ATP-dependent RNA helicase drs1 (EC 3.6.1.-)| Length = 830 Score = 47.4 bits (111), Expect = 3e-05 Identities = 29/72 (40%), Positives = 42/72 (58%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 D++G A TGSGKT ++++P L + +PR + V IL PTRELAVQ ATK + Sbjct: 349 DIVGSAVTGSGKTAAFVVPILERLLFRPR--KVPTSRVAILMPTRELAVQCYNVATKLAT 406 Query: 184 YSRTRSTCIYGG 219 ++ + GG Sbjct: 407 HTDITFCQLVGG 418 Score = 29.3 bits (64), Expect = 9.4 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 3/46 (6%) Frame = +2 Query: 197 EAHVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL---GMVTCLN 325 E H S + R + F+ GK + ATD+A+RGL G+ T +N Sbjct: 584 ELHGSMSQEQRIKSVENFREGKVAFLLATDLASRGLDIKGVETVIN 629
>DDX49_HUMAN (Q9Y6V7) Probable ATP-dependent RNA helicase DDX49 (EC 3.6.1.-)| (DEAD box protein 49) Length = 483 Score = 47.0 bits (110), Expect = 4e-05 Identities = 28/72 (38%), Positives = 37/72 (51%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 D +G A+TGSGKT +++LP L + P G L+L PTRELA QI + G Sbjct: 41 DCLGCAKTGSGKTAAFVLPILQKLSEDPY-----GIFCLVLTPTRELAYQIAEQFRVLGK 95 Query: 184 YSRTRSTCIYGG 219 + I GG Sbjct: 96 PLGLKDCIIVGG 107
>DDX49_MOUSE (Q4FZF3) Probable ATP-dependent RNA helicase DDX49 (EC 3.6.1.-)| (DEAD box protein 49) Length = 480 Score = 47.0 bits (110), Expect = 4e-05 Identities = 28/72 (38%), Positives = 37/72 (51%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 D +G A+TGSGKT +++LP L + P G L+L PTRELA QI + G Sbjct: 41 DCLGCAKTGSGKTAAFVLPILQKLSEDPY-----GIFCLVLTPTRELAYQIAEQFRVLGK 95 Query: 184 YSRTRSTCIYGG 219 + I GG Sbjct: 96 PLGLKDCIIVGG 107
>DBP10_CANGA (Q6FNA2) ATP-dependent RNA helicase DBP10 (EC 3.6.1.-)| Length = 969 Score = 47.0 bits (110), Expect = 4e-05 Identities = 25/72 (34%), Positives = 41/72 (56%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 D++G+A TGSGKT +++LP + + G +IL+P+RELA+Q + +F Sbjct: 154 DIVGMARTGSGKTAAFVLPMIEKLKTH---SSKIGARAIILSPSRELAMQTHSVFKEFSR 210 Query: 184 YSRTRSTCIYGG 219 + RS + GG Sbjct: 211 GTHLRSVLLTGG 222 Score = 29.6 bits (65), Expect = 7.2 Identities = 14/37 (37%), Positives = 21/37 (56%) Frame = +2 Query: 218 EHLRDYVLAEFKNGKSPIMAATDVAARGLGMVTCLNI 328 +H R L F+ G + I+ TDVAARG+ + N+ Sbjct: 443 QHARKSQLYNFRIGLTSILVVTDVAARGVDIPMLANV 479
>RHLB_PHOPR (Q6LLL5) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 437 Score = 46.6 bits (109), Expect = 6e-05 Identities = 25/74 (33%), Positives = 44/74 (59%), Gaps = 2/74 (2%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQG--DGPIVLILAPTRELAVQIQAEATKF 177 D+ G A+TG+GKTL+++ ++ P ++ + P +I+APTRELA+QI +A Sbjct: 48 DIAGQAQTGTGKTLAFLTATFNYLLLNPASDERKTNQPRAIIMAPTRELAIQIYNDAAPL 107 Query: 178 GSYSRTRSTCIYGG 219 + + ++ YGG Sbjct: 108 LASTGLKAGLAYGG 121
>SUB2_CRYNE (Q5KNA3) ATP-dependent RNA helicase SUB2 (EC 3.6.1.-)| Length = 442 Score = 46.6 bits (109), Expect = 6e-05 Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 2/76 (2%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPI-VLILAPTRELAVQIQAEATKFG 180 DV+ A++G GKT ++L L ++E DG + ++IL TRELA QI+ E T+F Sbjct: 98 DVLCQAKSGMGKTAVFVLAAL------QQIEPVDGEVSIIILCHTRELAYQIKNEFTRFS 151 Query: 181 SY-SRTRSTCIYGGAP 225 + + R+ YGG P Sbjct: 152 KFMTNVRTGVFYGGTP 167
>DBP8_SCHPO (Q9HGM5) ATP-dependent RNA helicase dbp8 (EC 3.6.1.-)| Length = 453 Score = 46.6 bits (109), Expect = 6e-05 Identities = 28/70 (40%), Positives = 36/70 (51%) Frame = +1 Query: 10 IGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYS 189 IG A+TGSGKT ++ LP + P G LIL PTRELA+QI + G+ Sbjct: 48 IGGAKTGSGKTAAFALPIIEKWSKDP-----SGIFALILTPTRELAIQIDEQFAALGANL 102 Query: 190 RTRSTCIYGG 219 + I GG Sbjct: 103 NLKHALIVGG 112 Score = 29.3 bits (64), Expect = 9.4 Identities = 16/39 (41%), Positives = 21/39 (53%) Frame = +2 Query: 188 RELEAHVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 R E H V+ R L F+ + I+ ATDVA+RGL Sbjct: 284 RVTELHSEMVQRERINSLGRFRAEAAKILVATDVASRGL 322
>MAK5_ASPFU (Q4WMS3) ATP-dependent RNA helicase mak5 (EC 3.6.1.-)| Length = 777 Score = 46.6 bits (109), Expect = 6e-05 Identities = 30/61 (49%), Positives = 37/61 (60%), Gaps = 10/61 (16%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVH--------VGAQPR--LEQGDGPIVLILAPTRELAVQ 153 DVIG A TGSGKTL++ +P L H + AQ E+ PI LIL+PTRELA Q Sbjct: 240 DVIGKASTGSGKTLAFGIPILEHYLEKKRDDISAQKEQMSEKDSTPIALILSPTRELAHQ 299 Query: 154 I 156 + Sbjct: 300 L 300
>IF4A_DROME (Q02748) Eukaryotic initiation factor 4A (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A) (eIF-4A) Length = 403 Score = 46.6 bits (109), Expect = 6e-05 Identities = 36/98 (36%), Positives = 46/98 (46%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DVI A++G+GKT ++ + L + R Q LILAPTRELA QIQ G Sbjct: 69 DVIAQAQSGTGKTATFSIAILQQIDTSIRECQA-----LILAPTRELATQIQRVVMALGE 123 Query: 184 YSRTRSTCIYGGAPKGLCSGRV*EWEESYNGCHRCSGT 297 Y + S GG R+ E +GCH GT Sbjct: 124 YMKVHSHACIGGT-NVREDARILE-----SGCHVVVGT 155 Score = 31.2 bits (69), Expect = 2.5 Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 8/57 (14%) Frame = +2 Query: 158 RQKLQSLDHTRELEAHVSTVEHL--------RDYVLAEFKNGKSPIMAATDVAARGL 304 R+K+ L T+E+ H TV + R+ ++ +F++G S ++ TD+ ARG+ Sbjct: 279 RRKVDQL--TQEMSIHNFTVSAMHGDMEQRDREVIMKQFRSGSSRVLITTDLLARGI 333
>IF4A_YARLI (Q6CDV4) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 395 Score = 46.6 bits (109), Expect = 6e-05 Identities = 27/72 (37%), Positives = 39/72 (54%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DV+ A++G+GKT ++ + L ++ E+ P LI+APTRELA QIQ FG Sbjct: 61 DVLAQAQSGTGKTATFSISALQNID-----EKIKKPQALIIAPTRELAHQIQKVVLAFGE 115 Query: 184 YSRTRSTCIYGG 219 Y + GG Sbjct: 116 YMKIECHACIGG 127 Score = 31.2 bits (69), Expect = 2.5 Identities = 13/34 (38%), Positives = 20/34 (58%) Frame = +2 Query: 203 HVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 H T + RD ++ F+ G S I+ TD+ ARG+ Sbjct: 292 HGETEQSQRDVIMKAFRTGSSRILITTDLLARGI 325
>DBP10_ASHGO (Q757U8) ATP-dependent RNA helicase DBP10 (EC 3.6.1.-)| Length = 960 Score = 46.6 bits (109), Expect = 6e-05 Identities = 26/72 (36%), Positives = 40/72 (55%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 D++G+A TGSGKT +++LP + + G +IL+P+RELA+Q +F Sbjct: 159 DIVGMARTGSGKTAAFVLPLIEKLKMH---SAKIGARAMILSPSRELAMQTHKVFKEFAK 215 Query: 184 YSRTRSTCIYGG 219 S RS + GG Sbjct: 216 GSNLRSVLLTGG 227 Score = 29.3 bits (64), Expect = 9.4 Identities = 14/37 (37%), Positives = 21/37 (56%) Frame = +2 Query: 218 EHLRDYVLAEFKNGKSPIMAATDVAARGLGMVTCLNI 328 +H R L F+ G + I+ TDVAARG+ + N+ Sbjct: 446 QHARRQQLHNFRCGLTNILVVTDVAARGVDIPLLANV 482
>DBP9_EMENI (Q5AZA6) ATP-dependent RNA helicase dbp9 (EC 3.6.1.-)| Length = 610 Score = 46.2 bits (108), Expect = 7e-05 Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 4/65 (6%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHV----GAQPRLEQGDGPIVLILAPTRELAVQIQAEAT 171 D++ A+TGSGKT +Y+LP L + P ++ G LIL PTRELA Q+Q T Sbjct: 67 DILARAKTGSGKTAAYVLPILQTILQKKAIDPSMKATTG---LILVPTRELAEQVQKVIT 123 Query: 172 KFGSY 186 F ++ Sbjct: 124 TFAAF 128
>DBP8_CANAL (Q59PR3) ATP-dependent RNA helicase DBP8 (EC 3.6.1.-)| Length = 440 Score = 46.2 bits (108), Expect = 7e-05 Identities = 28/72 (38%), Positives = 37/72 (51%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 D IG A+TGSGKT+++ P L P G LIL PTRELA+QI + G+ Sbjct: 40 DCIGGAKTGSGKTIAFAAPMLTQWSEDPF-----GIFGLILTPTRELALQIAEQFAALGA 94 Query: 184 YSRTRSTCIYGG 219 + + GG Sbjct: 95 NMNIKVAVVVGG 106 Score = 32.0 bits (71), Expect = 1.4 Identities = 21/53 (39%), Positives = 28/53 (52%) Frame = +2 Query: 158 RQKLQSLDHTRELEAHVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGLGMVT 316 R+ L+ LD R H + R L FK G + I+ ATDVA+RGL + T Sbjct: 270 RRMLRKLDF-RVASLHSEMPQSERTNSLHRFKAGAARILIATDVASRGLDIPT 321
>DDX48_HUMAN (P38919) Probable ATP-dependent RNA helicase DDX48 (EC 3.6.1.-)| (DEAD box protein 48) (Eukaryotic initiation factor 4A-like NUK-34) (Nuclear matrix protein 265) (hNMP 265) (Eukaryotic translation initiation factor 4A isoform 3) Length = 411 Score = 46.2 bits (108), Expect = 7e-05 Identities = 30/76 (39%), Positives = 39/76 (51%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DVI +++G+GKT ++ + L + Q R Q LILAPTRELAVQIQ G Sbjct: 77 DVIAQSQSGTGKTATFSISVLQCLDIQVRETQA-----LILAPTRELAVQIQKGLLALGD 131 Query: 184 YSRTRSTCIYGGAPKG 231 Y + GG G Sbjct: 132 YMNVQCHACIGGTNVG 147 Score = 30.0 bits (66), Expect = 5.5 Identities = 12/26 (46%), Positives = 20/26 (76%) Frame = +2 Query: 227 RDYVLAEFKNGKSPIMAATDVAARGL 304 R+ ++ EF++G S ++ +TDV ARGL Sbjct: 316 RESIMKEFRSGASRVLISTDVWARGL 341
>DBP10_KLULA (Q6CIR0) ATP-dependent RNA helicase DBP10 (EC 3.6.1.-)| Length = 973 Score = 46.2 bits (108), Expect = 7e-05 Identities = 26/72 (36%), Positives = 40/72 (55%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 D++G+A TGSGKT +++LP + + G +IL+P+RELA+Q +F Sbjct: 165 DIVGMARTGSGKTAAFVLPMIEKLKTH---SAKIGVRAVILSPSRELAIQTHRVFKEFSK 221 Query: 184 YSRTRSTCIYGG 219 S RS + GG Sbjct: 222 GSDLRSILLTGG 233 Score = 30.4 bits (67), Expect = 4.2 Identities = 14/37 (37%), Positives = 21/37 (56%) Frame = +2 Query: 218 EHLRDYVLAEFKNGKSPIMAATDVAARGLGMVTCLNI 328 +H R L F+ G + I+ TDVAARG+ + N+ Sbjct: 454 QHARKQQLYNFRAGLTSILVVTDVAARGVDIPLLANV 490
>DDX54_HUMAN (Q8TDD1) ATP-dependent RNA helicase DDX54 (EC 3.6.1.-) (DEAD box| protein 54) (ATP-dependent RNA helicase DP97) Length = 881 Score = 45.8 bits (107), Expect = 1e-04 Identities = 26/72 (36%), Positives = 38/72 (52%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DV+ +A TGSGKT ++LP + G LIL+PTRELA+Q + G Sbjct: 135 DVVAMARTGSGKTACFLLPMFERLKTH---SAQTGARALILSPTRELALQTLKFTKELGK 191 Query: 184 YSRTRSTCIYGG 219 ++ ++ I GG Sbjct: 192 FTGLKTALILGG 203
>DBP7_CANGA (Q8TFL3) ATP-dependent RNA helicase DBP7 (EC 3.6.1.-)| Length = 715 Score = 45.8 bits (107), Expect = 1e-04 Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 1/71 (1%) Frame = +1 Query: 19 AETGSGKTLSYILPGLVHV-GAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGSYSRT 195 A+TGSGKTL+Y+LP + G +++ G LI+APTRELA QI T + Sbjct: 173 AQTGSGKTLAYLLPIFSAILGMGDHIDRKSGCFALIIAPTRELASQIYHVTTMLANCCHY 232 Query: 196 RSTCIYGGAPK 228 C+ G + Sbjct: 233 LVPCLLIGGER 243
>Y308_MYCGE (P52271) Probable ATP-dependent RNA helicase MG308 (EC 3.6.1.-)| Length = 410 Score = 45.8 bits (107), Expect = 1e-04 Identities = 27/64 (42%), Positives = 36/64 (56%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 ++IGIAETGSGKT +Y+LP L + D P +I PT+EL QI T+ Sbjct: 34 NIIGIAETGSGKTFAYLLPLLDKINTSL-----DQPQAVIFVPTKELQWQIINILTEIKK 88 Query: 184 YSRT 195 Y +T Sbjct: 89 YFKT 92
>DBP9_ASPOR (Q2UFL0) ATP-dependent RNA helicase dbp9 (EC 3.6.1.-)| Length = 605 Score = 45.8 bits (107), Expect = 1e-04 Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 4/65 (6%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHV----GAQPRLEQGDGPIVLILAPTRELAVQIQAEAT 171 D++ A+TGSGKT +Y+LP L + P + G LIL PTRELA Q+Q T Sbjct: 66 DILARAKTGSGKTAAYVLPILQTILQKKATDPSFKATTG---LILVPTRELAEQVQNVVT 122 Query: 172 KFGSY 186 F ++ Sbjct: 123 TFAAF 127
>FAL1_CRYNE (Q5KJJ2) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)| Length = 396 Score = 45.8 bits (107), Expect = 1e-04 Identities = 28/76 (36%), Positives = 37/76 (48%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DVI A++G+GKT ++ + L + R Q L+L+PTRELAVQIQ G Sbjct: 62 DVIAQAQSGTGKTATFSISMLQSIDTNLRETQA-----LVLSPTRELAVQIQTVVLALGD 116 Query: 184 YSRTRSTCIYGGAPKG 231 Y GG G Sbjct: 117 YMNVSCHACIGGTSVG 132 Score = 35.0 bits (79), Expect = 0.17 Identities = 15/34 (44%), Positives = 23/34 (67%) Frame = +2 Query: 203 HVSTVEHLRDYVLAEFKNGKSPIMAATDVAARGL 304 H V+ RD ++AEF+ G+S ++ TDV ARG+ Sbjct: 293 HGEMVQKERDAIMAEFRGGQSRVLITTDVWARGI 326
>DBP10_DEBHA (Q6BL34) ATP-dependent RNA helicase DBP10 (EC 3.6.1.-)| Length = 932 Score = 45.8 bits (107), Expect = 1e-04 Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 1/73 (1%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGA-QPRLEQGDGPIVLILAPTRELAVQIQAEATKFG 180 DV+G+A TGSGKT ++ LP + + + PR+ G +IL+P+RELA Q + +F Sbjct: 136 DVVGMARTGSGKTAAFTLPLVEKLKSHSPRV----GVRAIILSPSRELASQTFKQVKEFS 191 Query: 181 SYSRTRSTCIYGG 219 + RS + GG Sbjct: 192 KGTDLRSIVLIGG 204 Score = 30.8 bits (68), Expect = 3.2 Identities = 13/37 (35%), Positives = 22/37 (59%) Frame = +2 Query: 218 EHLRDYVLAEFKNGKSPIMAATDVAARGLGMVTCLNI 328 +H R L +F+ G + ++ TDVAARG+ + N+ Sbjct: 426 QHARKQQLYQFRIGMTSLLVVTDVAARGIDIPILANV 462
>FAL1_USTMA (Q4P184) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)| Length = 397 Score = 45.8 bits (107), Expect = 1e-04 Identities = 27/76 (35%), Positives = 39/76 (51%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DVI A++G+GKT ++ + L + R Q L+L+PTRELA+QIQ+ G Sbjct: 63 DVIAQAQSGTGKTATFSISMLQSIDTTLRETQA-----LVLSPTRELAIQIQSVVLALGD 117 Query: 184 YSRTRSTCIYGGAPKG 231 Y + GG G Sbjct: 118 YLNVQCHACIGGTSVG 133 Score = 33.9 bits (76), Expect = 0.38 Identities = 17/42 (40%), Positives = 27/42 (64%) Frame = +2 Query: 227 RDYVLAEFKNGKSPIMAATDVAARGLGMVTCLNIRIML*FQL 352 RD V+AEF+ G S ++ TDV ARG+ + NI +++ + L Sbjct: 302 RDEVMAEFRQGSSRVLITTDVWARGIDIA---NISLVINYDL 340
>DDX48_MOUSE (Q91VC3) Probable ATP-dependent RNA helicase DDX48 (EC 3.6.1.-)| (DEAD box protein 48) Length = 411 Score = 45.8 bits (107), Expect = 1e-04 Identities = 30/76 (39%), Positives = 39/76 (51%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DVI +++G+GKT ++ + L + Q R Q LILAPTRELAVQIQ G Sbjct: 77 DVIAQSQSGTGKTATFSVSVLQCLDIQVRETQA-----LILAPTRELAVQIQKGLLALGD 131 Query: 184 YSRTRSTCIYGGAPKG 231 Y + GG G Sbjct: 132 YMNVQCHACIGGTNVG 147 Score = 30.0 bits (66), Expect = 5.5 Identities = 12/26 (46%), Positives = 20/26 (76%) Frame = +2 Query: 227 RDYVLAEFKNGKSPIMAATDVAARGL 304 R+ ++ EF++G S ++ +TDV ARGL Sbjct: 316 RESIMKEFRSGASRVLISTDVWARGL 341
>DBP10_ASPOR (Q2UHC1) ATP-dependent RNA helicase dbp10 (EC 3.6.1.-)| Length = 929 Score = 45.4 bits (106), Expect = 1e-04 Identities = 25/72 (34%), Positives = 41/72 (56%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQIQAEATKFGS 183 DV+G+A TGSGKT ++++P + + + G LIL+P+RELA+Q + G Sbjct: 128 DVVGMARTGSGKTAAFVIPMIEKLKSHSTKVGARG---LILSPSRELALQTLKVVKELGK 184 Query: 184 YSRTRSTCIYGG 219 + +S + GG Sbjct: 185 GTDLKSVLLVGG 196
>DBP10_USTMA (Q4P3W3) ATP-dependent RNA helicase DBP10 (EC 3.6.1.-)| Length = 1154 Score = 45.4 bits (106), Expect = 1e-04 Identities = 26/51 (50%), Positives = 34/51 (66%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPIVLILAPTRELAVQI 156 DV+G+A TGSGKTL+Y++P + + R G LIL P+RELAVQI Sbjct: 185 DVVGMARTGSGKTLAYLIPLINRLNG--RHSPTFGIKSLILCPSRELAVQI 233
>ROK1_GIBZE (Q4IPI1) ATP-dependent RNA helicase ROK1 (EC 3.6.1.-)| Length = 693 Score = 45.4 bits (106), Expect = 1e-04 Identities = 26/61 (42%), Positives = 39/61 (63%), Gaps = 4/61 (6%) Frame = +1 Query: 4 DVIGIAETGSGKTLSYILPGLVHVGAQPRLEQGDGPI----VLILAPTRELAVQIQAEAT 171 D + IA TGSGKT+S+++P + ++ + R E+ G I +I+APTREL QI +E Sbjct: 211 DFLAIAPTGSGKTISFLIPAINNI-LRRRSEENTGNIHELEAVIVAPTRELVHQIVSEGQ 269 Query: 172 K 174 K Sbjct: 270 K 270 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 87,033,642 Number of Sequences: 219361 Number of extensions: 1821990 Number of successful extensions: 5773 Number of sequences better than 10.0: 490 Number of HSP's better than 10.0 without gapping: 4876 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5403 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5424720305 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
