ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal37f20
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1HUNB_DRODA (O46262) Protein hunchback (Fragments) 29 3.7
2HUNB_DROTA (O46260) Protein hunchback (Fragments) 29 3.7
3HRP2_PLAFA (P05228) Histidine-rich protein precursor (Clone PFHR... 28 4.8
4OSKA_DROVI (Q24741) Maternal effect protein oskar 28 4.8
5APT_CLOPE (Q8XJ22) Adenine phosphoribosyltransferase (EC 2.4.2.7... 28 8.2
6HRP1_PLAFA (P05227) Histidine-rich protein precursor (Clone PFHR... 28 8.2

>HUNB_DRODA (O46262) Protein hunchback (Fragments)|
          Length = 195

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -2

Query: 209 NLKNNQILHKHHLFSVHTPTHHLDSPSHAKSISPER 102
           N+K   I H HH    H   H  DS S++ + SP +
Sbjct: 9   NIKQEPISHHHHHHHAHHSHHAHDSNSNSNASSPHQ 44



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>HUNB_DROTA (O46260) Protein hunchback (Fragments)|
          Length = 192

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = -2

Query: 209 NLKNNQILHKHHLFSVHTPTHHLDSPSHAKS 117
           N+K   I H HH    H  +HH DS S+A S
Sbjct: 9   NIKQEPISHHHHHHHAH-HSHHADSNSNASS 38



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>HRP2_PLAFA (P05228) Histidine-rich protein precursor (Clone PFHRP-III)|
          Length = 241

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = -2

Query: 185 HKHHLFSVHTPTHHLDSPSHAKSISPERHAAQQHPSA 75
           H HH+   H   HH+    HA   +   HAA  H +A
Sbjct: 59  HAHHVADAHH-AHHVADAHHAHHAANAHHAANAHHAA 94



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>OSKA_DROVI (Q24741) Maternal effect protein oskar|
          Length = 594

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = -1

Query: 144 SRLALTCKIYQSGKTCSTAASISNEVVGQARARALEVELTELT 16
           +R+ L C+  +  K   +   IS + +  AR R   VEL E+T
Sbjct: 422 ARMELKCRFKKFEKVLQSGLCISGQTINAARQRLRLVELPEMT 464



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>APT_CLOPE (Q8XJ22) Adenine phosphoribosyltransferase (EC 2.4.2.7) (APRT)|
          Length = 172

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 13/46 (28%), Positives = 24/46 (52%)
 Frame = -1

Query: 141 RLALTCKIYQSGKTCSTAASISNEVVGQARARALEVELTELTCRER 4
           R+A+   +  +G T +  A +  +  G+    A  +ELTEL  R++
Sbjct: 113 RVAIVDDLLATGGTIAAVAKLVEQAGGEVAGLAFTIELTELKGRDK 158



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>HRP1_PLAFA (P05227) Histidine-rich protein precursor (Clone PFHRP-II)|
          Length = 332

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 14/37 (37%), Positives = 15/37 (40%)
 Frame = -2

Query: 185 HKHHLFSVHTPTHHLDSPSHAKSISPERHAAQQHPSA 75
           H HH    H   HH     HA   S   HAA  H +A
Sbjct: 143 HAHHAADAHH-AHHAAYAHHAHHASDAHHAADAHHAA 178


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,907,546
Number of Sequences: 219361
Number of extensions: 495534
Number of successful extensions: 1455
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1388
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1452
length of database: 80,573,946
effective HSP length: 57
effective length of database: 68,070,369
effective search space used: 1633688856
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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