ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal37e01 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_493785.1| Oryza sativa (japonica cultivar-group), Ozsa8504 predicted mRNA Length = 1314 Score = 77.8 bits (39), Expect = 3e-11 Identities = 83/97 (85%), Gaps = 3/97 (3%) Strand = Plus / Plus Query: 68 cttcgatgccatcgtcttcgccaccgggtaccgcagcacggcaaagaagtggctcaagag 127 |||||| |||||||||||||||||||| ||||| ||||| | ||| ||||||||||||| Sbjct: 1038 cttcgacgccatcgtcttcgccaccggttaccggagcaccaccaagcagtggctcaagag 1097 Query: 128 cgacggcggcgggctgatcggtgacgatgggatggcg 164 ||| | |||||||||||| ||||| ||||||||| Sbjct: 1098 cga---tgacgggctgatcggcgacgacgggatggcg 1131 Score = 54.0 bits (27), Expect = 4e-04 Identities = 81/99 (81%) Strand = Plus / Plus Query: 180 aagggggagaatgggttgtaccgcgctgggctggcagggagagggatctacggcagcggc 239 ||||||||||| ||| ||||| |||| ||| ||| |||| || ||||||||||||||| Sbjct: 1156 aagggggagaacgggctgtactgcgccgggatggtgaggaggggaatctacggcagcggc 1215 Query: 240 acagacggggagttcatcgcggaggacatcagcaggcag 278 |||| |||| ||||||| || |||||||||| |||| Sbjct: 1216 gaggacgcggagctcatcgccgacgacatcagcaagcag 1254
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 60.0 bits (30), Expect = 7e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 68 cttcgatgccatcgtcttcgccaccgggtaccgcagcacggcaaagaagtggctcaag 125 |||||| |||||||||||||||||||| ||||| ||||| | ||| ||||||||||| Sbjct: 9512920 cttcgacgccatcgtcttcgccaccggttaccggagcaccaccaagcagtggctcaag 9512977 Score = 54.0 bits (27), Expect = 4e-04 Identities = 81/99 (81%) Strand = Plus / Plus Query: 180 aagggggagaatgggttgtaccgcgctgggctggcagggagagggatctacggcagcggc 239 ||||||||||| ||| ||||| |||| ||| ||| |||| || ||||||||||||||| Sbjct: 9513920 aagggggagaacgggctgtactgcgccgggatggtgaggaggggaatctacggcagcggc 9513979 Query: 240 acagacggggagttcatcgcggaggacatcagcaggcag 278 |||| |||| ||||||| || |||||||||| |||| Sbjct: 9513980 gaggacgcggagctcatcgccgacgacatcagcaagcag 9514018 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Plus Query: 42 gagttcgccggcggggagcggcaccgcttcgatgccatcgtcttcgccaccgggtaccgc 101 |||||||||| ||| |||| ||| |||||| ||| |||||||||||||||| ||||| Sbjct: 9491882 gagttcgccgacggccagcgccacgccttcgacgccgtcgtcttcgccaccggctaccgg 9491941 Query: 102 agcac 106 ||||| Sbjct: 9491942 agcac 9491946 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 ggcgatgacggaggcgatgg 313 |||||||||||||||||||| Sbjct: 25897389 ggcgatgacggaggcgatgg 25897370 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 137 cgggctgatcggtgacgatgggatggcg 164 |||||||||||| ||||| ||||||||| Sbjct: 9513868 cgggctgatcggcgacgacgggatggcg 9513895 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 137 cgggctgatcggtgacgatgggatggcg 164 |||||||||||| ||||| ||||||||| Sbjct: 9492592 cgggctgatcggcgacgacgggatggcg 9492619
>dbj|AP000837.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0424A08 Length = 151294 Score = 60.0 bits (30), Expect = 7e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 68 cttcgatgccatcgtcttcgccaccgggtaccgcagcacggcaaagaagtggctcaag 125 |||||| |||||||||||||||||||| ||||| ||||| | ||| ||||||||||| Sbjct: 46349 cttcgacgccatcgtcttcgccaccggttaccggagcaccaccaagcagtggctcaag 46406 Score = 54.0 bits (27), Expect = 4e-04 Identities = 81/99 (81%) Strand = Plus / Plus Query: 180 aagggggagaatgggttgtaccgcgctgggctggcagggagagggatctacggcagcggc 239 ||||||||||| ||| ||||| |||| ||| ||| |||| || ||||||||||||||| Sbjct: 47349 aagggggagaacgggctgtactgcgccgggatggtgaggaggggaatctacggcagcggc 47408 Query: 240 acagacggggagttcatcgcggaggacatcagcaggcag 278 |||| |||| ||||||| || |||||||||| |||| Sbjct: 47409 gaggacgcggagctcatcgccgacgacatcagcaagcag 47447 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Plus Query: 42 gagttcgccggcggggagcggcaccgcttcgatgccatcgtcttcgccaccgggtaccgc 101 |||||||||| ||| |||| ||| |||||| ||| |||||||||||||||| ||||| Sbjct: 25311 gagttcgccgacggccagcgccacgccttcgacgccgtcgtcttcgccaccggctaccgg 25370 Query: 102 agcac 106 ||||| Sbjct: 25371 agcac 25375 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 137 cgggctgatcggtgacgatgggatggcg 164 |||||||||||| ||||| ||||||||| Sbjct: 47297 cgggctgatcggcgacgacgggatggcg 47324 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 137 cgggctgatcggtgacgatgggatggcg 164 |||||||||||| ||||| ||||||||| Sbjct: 26021 cgggctgatcggcgacgacgggatggcg 26048
>ref|XM_493782.1| Oryza sativa (japonica cultivar-group), Ozsa8501 predicted mRNA Length = 1197 Score = 58.0 bits (29), Expect = 3e-05 Identities = 100/123 (81%), Gaps = 3/123 (2%) Strand = Plus / Plus Query: 42 gagttcgccggcggggagcggcaccgcttcgatgccatcgtcttcgccaccgggtaccgc 101 |||||||||| ||| |||| ||| |||||| ||| |||||||||||||||| ||||| Sbjct: 910 gagttcgccgacggccagcgccacgccttcgacgccgtcgtcttcgccaccggctaccgg 969 Query: 102 agcacggcaaagaagtggctcaagagcgacggcggcgggctgatcggtgacgatgggatg 161 ||||| | ||| | ||||||||||| || | |||||||||||| ||||| |||||| Sbjct: 970 agcaccaccaagcactggctcaagagtga---tgacgggctgatcggcgacgacgggatg 1026 Query: 162 gcg 164 ||| Sbjct: 1027 gcg 1029
>dbj|AK109645.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-138-H02, full insert sequence Length = 1384 Score = 58.0 bits (29), Expect = 3e-05 Identities = 100/123 (81%), Gaps = 3/123 (2%) Strand = Plus / Plus Query: 42 gagttcgccggcggggagcggcaccgcttcgatgccatcgtcttcgccaccgggtaccgc 101 |||||||||| ||| |||| ||| |||||| ||| |||||||||||||||| ||||| Sbjct: 944 gagttcgccgacggccagcgccacgccttcgacgccgtcgtcttcgccaccggctaccgg 1003 Query: 102 agcacggcaaagaagtggctcaagagcgacggcggcgggctgatcggtgacgatgggatg 161 ||||| | ||| | ||||||||||| || | |||||||||||| ||||| |||||| Sbjct: 1004 agcaccaccaagcactggctcaagagtga---tgacgggctgatcggcgacgacgggatg 1060 Query: 162 gcg 164 ||| Sbjct: 1061 gcg 1063
>gb|DQ415456.1| Antheraea roylii D-loop, complete sequence; mitochondrial Length = 587 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 449 ttaaatattttaatataagaaaa 471 ||||||||||||||||||||||| Sbjct: 351 ttaaatattttaatataagaaaa 329
>emb|AL731628.4|OSJN00282 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0088C09, complete sequence Length = 96079 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 47 cgccggcggggagcggcaccgc 68 |||||||||||||||||||||| Sbjct: 16757 cgccggcggggagcggcaccgc 16778
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 47 cgccggcggggagcggcaccgc 68 |||||||||||||||||||||| Sbjct: 20913533 cgccggcggggagcggcaccgc 20913554
>dbj|AK111485.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-188-G05, full insert sequence Length = 1070 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 47 cgccggcggggagcggcaccgc 68 |||||||||||||||||||||| Sbjct: 497 cgccggcggggagcggcaccgc 476
>gb|AC169813.2| Rhesus Macaque BAC CH250-16M3 (Children's Hospital Oakland Research Institute Rhesus macaque Adult Male BAC Library) complete sequence Length = 168861 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 451 aaatattttaatataagaaaa 471 ||||||||||||||||||||| Sbjct: 164810 aaatattttaatataagaaaa 164830
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 63 caccgcttcgatgccatcgtc 83 ||||||||||||||||||||| Sbjct: 3204687 caccgcttcgatgccatcgtc 3204667
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 75 gccatcgtcttcgccaccggg 95 ||||||||||||||||||||| Sbjct: 2041528 gccatcgtcttcgccaccggg 2041508
>emb|CR749774.14| Zebrafish DNA sequence from clone CH211-167E20 in linkage group 8, complete sequence Length = 132644 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 451 aaatattttaatataagaaaa 471 ||||||||||||||||||||| Sbjct: 92714 aaatattttaatataagaaaa 92734
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 70 tcgatgccatcgtcttcgccaccgg 94 |||| |||||||||||||||||||| Sbjct: 2082287 tcgacgccatcgtcttcgccaccgg 2082311
>emb|AL939109.1|SCO939109 Streptomyces coelicolor A3(2) complete genome; segment 6/29 Length = 277000 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 cgacggcggcgggctgatcgg 148 ||||||||||||||||||||| Sbjct: 153383 cgacggcggcgggctgatcgg 153403
>gb|AE005753.1| Caulobacter crescentus CB15 section 79 of 359 of the complete genome Length = 10329 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 70 tcgatgccatcgtcttcgccaccgg 94 |||| |||||||||||||||||||| Sbjct: 2978 tcgacgccatcgtcttcgccaccgg 2954
>gb|AC026115.27| Homo sapiens 12 BAC RP11-1026F22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 99545 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 451 aaatattttaatataagaaaa 471 ||||||||||||||||||||| Sbjct: 62054 aaatattttaatataagaaaa 62034
>emb|CR792414.6| Zebrafish DNA sequence from clone CH211-95O10 in linkage group 4, complete sequence Length = 66595 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 452 aatattttaatataagaaaat 472 ||||||||||||||||||||| Sbjct: 6671 aatattttaatataagaaaat 6651
>emb|BX901908.8| Zebrafish DNA sequence from clone DKEY-268B12 in linkage group 4, complete sequence Length = 210697 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 452 aatattttaatataagaaaat 472 ||||||||||||||||||||| Sbjct: 124826 aatattttaatataagaaaat 124806
>emb|AL954657.14| Zebrafish DNA sequence from clone CH211-223E21 in linkage group 4, complete sequence Length = 200352 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 452 aatattttaatataagaaaat 472 ||||||||||||||||||||| Sbjct: 178600 aatattttaatataagaaaat 178580
>gb|DQ322651.1| Streptomyces sp. FR1 plasmid pFRL1, complete sequence Length = 54288 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 42 gagttcgccggcggggagcgg 62 ||||||||||||||||||||| Sbjct: 36682 gagttcgccggcggggagcgg 36662
>ref|NM_192293.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 753 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 ggcgatgacggaggcgatgg 313 |||||||||||||||||||| Sbjct: 447 ggcgatgacggaggcgatgg 428
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 cgacggcggcgggctgatcg 147 |||||||||||||||||||| Sbjct: 48312 cgacggcggcgggctgatcg 48293
>ref|XM_420224.1| PREDICTED: Gallus gallus similar to RIKEN cDNA 2900009I07 (LOC422236), mRNA Length = 1174 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 gagcgacggcggcgggctga 144 |||||||||||||||||||| Sbjct: 144 gagcgacggcggcgggctga 163
>emb|BX323794.17| Zebrafish DNA sequence from clone CH211-247C16 in linkage group 17, complete sequence Length = 91210 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 451 aaatattttaatataagaaa 470 |||||||||||||||||||| Sbjct: 43813 aaatattttaatataagaaa 43794
>gb|AC127233.2| Mus musculus BAC clone RP24-559K11 from chromosome 3, complete sequence Length = 160255 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 451 aaatattttaatataagaaa 470 |||||||||||||||||||| Sbjct: 146259 aaatattttaatataagaaa 146240
>gb|AC104396.7| Mus musculus BAC clone RP23-413J8 from chromosome 3, complete sequence Length = 195860 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 451 aaatattttaatataagaaa 470 |||||||||||||||||||| Sbjct: 175778 aaatattttaatataagaaa 175797
>emb|CR848687.8| Zebrafish DNA sequence from clone DKEY-46H11 in linkage group 7, complete sequence Length = 87887 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 449 ttaaatattttaatataagaaaat 472 |||||||||||||||||| ||||| Sbjct: 20044 ttaaatattttaatataaaaaaat 20021
>ref|NM_001031118.1| Gallus gallus similar to RIKEN cDNA 2900009I07 (LOC422237), mRNA Length = 3016 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 gagcgacggcggcgggctga 144 |||||||||||||||||||| Sbjct: 307 gagcgacggcggcgggctga 326
>emb|BX842572.1| Mycobacterium tuberculosis H37Rv complete genome; segment 1/13 Length = 341957 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 cgacggcggcgggctgatcg 147 |||||||||||||||||||| Sbjct: 48368 cgacggcggcgggctgatcg 48349
>emb|BX248334.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 1/14 Length = 343050 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 cgacggcggcgggctgatcg 147 |||||||||||||||||||| Sbjct: 48352 cgacggcggcgggctgatcg 48333
>emb|AL583923.1|MLEPRTN7 Mycobacterium leprae strain TN complete genome; segment 7/10 Length = 348950 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 59 gcggcaccgcttcgatgccatcgt 82 ||||||| |||||||||||||||| Sbjct: 81629 gcggcactgcttcgatgccatcgt 81606
>emb|AJ719697.1| Gallus gallus mRNA for hypothetical protein, clone 5g5 Length = 3043 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 gagcgacggcggcgggctga 144 |||||||||||||||||||| Sbjct: 307 gagcgacggcggcgggctga 326
>gb|AC022558.9| Homo sapiens chromosome 15, clone RP11-90B9, complete sequence Length = 186403 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 aagatgcttaaatattttaa 461 |||||||||||||||||||| Sbjct: 37871 aagatgcttaaatattttaa 37890
>gb|AC005713.8|AC005713 Drosophila melanogaster, chromosome 2R, region 54A1-54B2, BAC clone BACR48A11, complete sequence Length = 157507 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 438 acataagatgcttaaatatt 457 |||||||||||||||||||| Sbjct: 74999 acataagatgcttaaatatt 75018
>gb|AC007520.8|AC007520 Drosophila melanogaster, chromosome 2R, region 53D-54A, BAC clone BACR11M15, complete sequence Length = 170994 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 438 acataagatgcttaaatatt 457 |||||||||||||||||||| Sbjct: 147637 acataagatgcttaaatatt 147656
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 agagcgacggcggcgggctg 143 |||||||||||||||||||| Sbjct: 23574201 agagcgacggcggcgggctg 23574182
>gb|AC108009.5| Homo sapiens BAC clone RP13-486L17 from 4, complete sequence Length = 58375 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 452 aatattttaatataagaaaa 471 |||||||||||||||||||| Sbjct: 53114 aatattttaatataagaaaa 53133
>dbj|AP003725.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0510C12 Length = 177049 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 ggcgatgacggaggcgatgg 313 |||||||||||||||||||| Sbjct: 137313 ggcgatgacggaggcgatgg 137294
>dbj|AP003629.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0481H08 Length = 146841 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 agagcgacggcggcgggctg 143 |||||||||||||||||||| Sbjct: 55165 agagcgacggcggcgggctg 55146
>emb|BX284684.8| Zebrafish DNA sequence from clone DKEY-14I10 in linkage group 8, complete sequence Length = 163766 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 449 ttaaatattttaatataaga 468 |||||||||||||||||||| Sbjct: 149892 ttaaatattttaatataaga 149911
>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome Length = 3940880 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 450 taaatattttaatataagaa 469 |||||||||||||||||||| Sbjct: 506817 taaatattttaatataagaa 506798
>emb|BX649425.3| Zebrafish DNA sequence from clone CH211-239E6 in linkage group 4, complete sequence Length = 133503 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 444 gatgcttaaatattttaata 463 |||||||||||||||||||| Sbjct: 62155 gatgcttaaatattttaata 62174
>gb|AE003804.4| Drosophila melanogaster chromosome 2R, section 46 of 73 of the complete sequence Length = 260337 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 438 acataagatgcttaaatatt 457 |||||||||||||||||||| Sbjct: 210762 acataagatgcttaaatatt 210781
>dbj|AP001274.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-840J5, complete sequence Length = 210282 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 453 atattttaatataagaaaat 472 |||||||||||||||||||| Sbjct: 89861 atattttaatataagaaaat 89880
>dbj|AP002427.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-90I16, complete sequence Length = 154159 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 453 atattttaatataagaaaat 472 |||||||||||||||||||| Sbjct: 153582 atattttaatataagaaaat 153601
>gb|AD000013.1|MSGY219 Mycobacterium tuberculosis sequence from clone y219 Length = 38721 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 cgacggcggcgggctgatcg 147 |||||||||||||||||||| Sbjct: 13346 cgacggcggcgggctgatcg 13365
>emb|AL355887.4|CNS05TCY Human chromosome 14 DNA sequence BAC R-179O11 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 159183 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 450 taaatattttaatataagaa 469 |||||||||||||||||||| Sbjct: 149652 taaatattttaatataagaa 149633
>emb|AL161713.4|CNS01RHE Human chromosome 14 DNA sequence BAC R-22K10 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 157383 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 450 taaatattttaatataagaa 469 |||||||||||||||||||| Sbjct: 157361 taaatattttaatataagaa 157380 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,027,608 Number of Sequences: 3902068 Number of extensions: 4027608 Number of successful extensions: 99390 Number of sequences better than 10.0: 49 Number of HSP's better than 10.0 without gapping: 50 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 98784 Number of HSP's gapped (non-prelim): 603 length of query: 484 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 462 effective length of database: 17,147,199,772 effective search space: 7922006294664 effective search space used: 7922006294664 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
