>XERC_XANCP (Q8P550) Tyrosine recombinase xerC|
          Length = 322

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = -3

Query: 132 RSLSPVHLQRKGARSVSYYA-LFKGWLLLGKPPAVLCTPTSPR 7
           R LSP  LQR+ +   SYYA L K   +   P A L  P +PR
Sbjct: 89  RGLSPKSLQRRLSACRSYYAWLLKHGRIATSPAAALRAPKAPR 131

>CLAT_HUMAN (P28329) Choline O-acetyltransferase (EC 2.3.1.6) (CHOACTase)|
           (Choline acetylase) (ChAT)
          Length = 748

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 19/60 (31%), Positives = 24/60 (40%)
 Frame = -3

Query: 192 ASL*GGTLPYRCILTSHSFGRSLSPVHLQRKGARSVSYYALFKGWLLLGKPPAVLCTPTS 13
           ASL  G L Y+ +L SHS     +   L  +      YY LF  + L G     L    S
Sbjct: 236 ASLISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNS 295

>MDLB_PSEPU (P20932) L(+)-mandelate dehydrogenase (EC 1.-.-.-) (S-mandelate|
           dehydrogenase) (MDH)
          Length = 393

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = +2

Query: 191 ATAKAGVDEAEARMSA*VTKTLVRIQCPENPRFPPQGSSTEG 316
           A  + GVDE    + A + +TL +I CP+     P     EG
Sbjct: 335 ARGETGVDEVLTLLKADIDRTLAQIGCPDITSLSPDYLQNEG 376

>NHR71_CAEEL (Q9GTD4) Nuclear hormone receptor family member nhr-71|
          Length = 579

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = +3

Query: 102 CAEDERG*AICRSCGMSKCIGRGAFRLRGKQPRK 203
           C  D  G   CRSC  +KCI  G  ++   QPR+
Sbjct: 53  CLIDPDGRCACRSCRFTKCIEAG-MKIGAVQPRR 85

>SPRT_VIBVY (Q7MHK4) Protein sprT|
          Length = 168

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = -3

Query: 246 VTQADILASASSTPAFAVASL*GGTLPYRC 157
           + Q   L  A++T  FAVAS+ G T  YRC
Sbjct: 100 IMQGVFLLPANTTHQFAVASVQGKTFQYRC 129

>SPRT_VIBVU (Q8DCA5) Protein sprT|
          Length = 168

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = -3

Query: 246 VTQADILASASSTPAFAVASL*GGTLPYRC 157
           + Q   L  A++T  FAVAS+ G T  YRC
Sbjct: 100 IMQGVFLLPANTTHQFAVASVQGKTFQYRC 129

>URIC_DROSU (O44111) Uricase (EC 1.7.3.3) (Urate oxidase) (Fragment)|
          Length = 339

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = -3

Query: 228 LASASSTPAFAVASL*GGTLPYRCILTSHSFGR-SLSPVHLQRKG 97
           L   SS      ASL G   P++  +T H +G+ ++  +H+ RKG
Sbjct: 1   LRQPSSASNRTAASLDGQETPFQYEITDHGYGKDAVKVLHVSRKG 45

>CLAT_PIG (P13222) Choline O-acetyltransferase (EC 2.3.1.6) (CHOACTase)|
           (Choline acetylase) (ChAT)
          Length = 640

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 16/49 (32%), Positives = 22/49 (44%)
 Frame = -3

Query: 192 ASL*GGTLPYRCILTSHSFGRSLSPVHLQRKGARSVSYYALFKGWLLLG 46
           A+L  G L Y+ +L SHS     +   L  +      YY LF  + L G
Sbjct: 128 ANLISGVLSYKALLDSHSIPIDCAKGQLSGQPLCMKQYYGLFSSYRLPG 176

>NHR35_CAEEL (Q17771) Nuclear hormone receptor family member nhr-35|
          Length = 542

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +3

Query: 93  ERPCAEDERG*AICRSCGMSKCIGRG 170
           E  C  D+   A+CR C   KCI  G
Sbjct: 116 ESKCEIDKHNRAVCRYCRFMKCISSG 141

>LUXC_PHOLL (Q7N577) Acyl-CoA reductase (EC 1.2.1.50)|
          Length = 480

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 19/70 (27%), Positives = 32/70 (45%)
 Frame = -3

Query: 291 GNLGFSGHWILTNVFVTQADILASASSTPAFAVASL*GGTLPYRCILTSHSFGRSLSPVH 112
           GN+  SG   +    +T+   +   SST  F   +L    L +  +  +H   RSLS V+
Sbjct: 153 GNVPLSGIMSILRAILTKNQCIIKTSSTDPFTANAL---ALSFIDVDPNHPITRSLSVVY 209

Query: 111 LQRKGARSVS 82
              +G  S++
Sbjct: 210 WPHQGDTSLA 219

>CO9_BOVIN (Q3MHN2) Complement component C9 precursor|
          Length = 548

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 17/56 (30%), Positives = 24/56 (42%)
 Frame = -3

Query: 228 LASASSTPAFAVASL*GGTLPYRCILTSHSFGRSLSPVHLQRKGARSVSYYALFKG 61
           L  A  TP++  A   G  LP  C ++S S      P   Q   +RS+  +  F G
Sbjct: 18  LLRAGPTPSYDPAERQGTPLPIDCRMSSWSEWSKCDPCLKQMFRSRSIEIFGQFNG 73


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,178,115
Number of Sequences: 219361
Number of extensions: 778991
Number of successful extensions: 1805
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1773
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1805
length of database: 80,573,946
effective HSP length: 84
effective length of database: 62,147,622
effective search space used: 1491542928
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)