>CHD3_CAEEL (Q22516) Chromodomain helicase-DNA-binding protein 3 homolog|
           (CHD-3)
          Length = 1787

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
 Frame = +3

Query: 381 MYMLIVHKYSKIEVPMVPNLSKIIN-NRRLHIWPPREADLESIHGSEVLCQIREHLTSII 557
           +Y L+   ++K    +   LS IIN  R   +W P    +  +   E    IREH  S +
Sbjct: 655 LYTLMKEGHTKGPFLIAAPLSTIINWEREAELWCPDFYVVTYVGDRESRMVIREHEFSFV 714

Query: 558 RWVHRNGPKINR 593
               R GPK+++
Sbjct: 715 DGAVRGGPKVSK 726

>CI093_HUMAN (Q6TFL3) Protein C9orf93|
          Length = 1326

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 24/106 (22%), Positives = 49/106 (46%)
 Frame = +3

Query: 240 RQLQQLSIQRKDTLTRWEHSIGSPEDCLHRRIAEMKEQECRTAIEDVMYMLIVHKYSKIE 419
           R+LQQ    ++DT T+    I + E C HR+  E++ Q         +++ +  +  K +
Sbjct: 636 RELQQT---QEDTFTKVAEQIKAQESCWHRQKKELELQYSE------LFLEVQKRAQKFQ 686

Query: 420 VPMVPNLSKIINNRRLHIWPPREADLESIHGSEVLCQIREHLTSII 557
                N+ K+ +  + H     +  LE+ H  ++L Q +    S++
Sbjct: 687 EIAEKNMEKLNHIEKSH----EQLVLENSHFKKLLSQTQREQMSLL 728

>TILS_WOLPM (Q73FR9) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)|
           (tRNA(Ile)-lysidine synthetase)
           (tRNA(Ile)-2-lysyl-cytidine synthase)
          Length = 431

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = +3

Query: 144 SVNAPL-EPQTWEGSFLCGLLKNQPQIFLVAAARQLQQLSIQRKD 275
           +VN PL EP  W+  F C +L NQ    ++A  ++ Q++    KD
Sbjct: 331 TVNLPLNEPTQWDNRFSCTILGNQGCSVIIAPLKKTQKVPEFLKD 375


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 98,479,025
Number of Sequences: 219361
Number of extensions: 2060925
Number of successful extensions: 5235
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5041
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5233
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 6856295237
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)