ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | baal37c11 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_472578.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1362 Score = 749 bits (378), Expect = 0.0 Identities = 600/674 (89%) Strand = Plus / Plus Query: 18 ggtgaagtgctcagttgggggcgtaaccaaaatggccagcttggtcttggaactactgaa 77 |||||||||| ||||||||||| |||||||| || ||||||||||||||||| |||||| Sbjct: 442 ggtgaagtgcaaagttgggggcgcaaccaaaacggacagcttggtcttggaaccactgaa 501 Query: 78 gattcgctgctcccacaaacgattcaagcttttgagggtatttctgtgaagatgattgct 137 || || |||||||||||| ||||||| |||||||||| ||| |||||| ||||||||| Sbjct: 502 gactcattgctcccacaaaagattcaatcttttgagggagtttgtgtgaaaatgattgct 561 Query: 138 gctggtgccgaacatactgctgcagtaactgaagatggcgatatctatggatggggctgg 197 |||||||| |||||||| |||||||||||||||||||| || ||||||||||||||||| Sbjct: 562 gctggtgctgaacataccgctgcagtaactgaagatggtgacctctatggatggggctgg 621 Query: 198 ggtcgatatggaaacttgggtcttggtgatcggaatgaccgatttgttcctgaaaaagta 257 |||||||||||||||||||| ||||||||||| ||||| || || || ||||| |||||| Sbjct: 622 ggtcgatatggaaacttggggcttggtgatcgcaatgatcggttggtacctgagaaagta 681 Query: 258 tcttcggtggagggagacaagatggtgcttgttgcatgcggatggcgccataccattact 317 ||||| ||||||||||| |||||||||||| ||||||| |||||||||||||| |||||| Sbjct: 682 tcttctgtggagggagagaagatggtgcttattgcatgtggatggcgccatacaattact 741 Query: 318 gtttcctcctccggtagtttgtacacttacggttggagtaaatatggtcagcttggtcat 377 ||||| ||||| ||||||||||| ||||| |||||||| ||||||||||| || || ||| Sbjct: 742 gtttcttcctctggtagtttgtatacttatggttggagcaaatatggtcaactagggcat 801 Query: 378 ggcgattttgaagatcatctagttccacataaagtagaagccttaaaggatagctctaca 437 || ||||||||||||||| |||||||||||||| |||| ||||||||||||||||||| | Sbjct: 802 ggtgattttgaagatcatttagttccacataaactagaggccttaaaggatagctctata 861 Query: 438 tcccagatttcaggtggatggaggcacacaatggcacttacatcagatggaaaactttat 497 || ||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||| Sbjct: 862 tcgcagatttcaggtggatggaggcatacaatggcgcttacatcagatggaaagctttat 921 Query: 498 ggatggggatggaacaagtttgggcaagttggagctggcgataatgctgatcactgttcc 557 || ||||| |||||||||||||||||||| |||| ||| |||| || ||||||||||| | Sbjct: 922 ggttgggggtggaacaagtttgggcaagtcggagttggtgatactgatgatcactgtttc 981 Query: 558 ccagcccaggttaattttcctgaggaacagaaagttgcccaagttgcttgtggatggagg 617 |||| ||||| || ||||| ||||| ||||||||||||||||||||||| || |||||| Sbjct: 982 ccagtacaggtcaagtttccagaggatcagaaagttgcccaagttgcttgcgggtggagg 1041 Query: 618 cacactcttgctttcacagaaaagaaaaatgtgtttgcatggggaaggggtactagtgga 677 || |||||||| || ||||||||||||||||| || ||||||| ||||||||||| ||| Sbjct: 1042 catactcttgcatttacagaaaagaaaaatgttttctcatgggggaggggtactagcgga 1101 Query: 678 caactcggtcatgg 691 ||||| |||||||| Sbjct: 1102 caacttggtcatgg 1115
>dbj|AK100857.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023123M01, full insert sequence Length = 2021 Score = 749 bits (378), Expect = 0.0 Identities = 600/674 (89%) Strand = Plus / Plus Query: 18 ggtgaagtgctcagttgggggcgtaaccaaaatggccagcttggtcttggaactactgaa 77 |||||||||| ||||||||||| |||||||| || ||||||||||||||||| |||||| Sbjct: 785 ggtgaagtgcaaagttgggggcgcaaccaaaacggacagcttggtcttggaaccactgaa 844 Query: 78 gattcgctgctcccacaaacgattcaagcttttgagggtatttctgtgaagatgattgct 137 || || |||||||||||| ||||||| |||||||||| ||| |||||| ||||||||| Sbjct: 845 gactcattgctcccacaaaagattcaatcttttgagggagtttgtgtgaaaatgattgct 904 Query: 138 gctggtgccgaacatactgctgcagtaactgaagatggcgatatctatggatggggctgg 197 |||||||| |||||||| |||||||||||||||||||| || ||||||||||||||||| Sbjct: 905 gctggtgctgaacataccgctgcagtaactgaagatggtgacctctatggatggggctgg 964 Query: 198 ggtcgatatggaaacttgggtcttggtgatcggaatgaccgatttgttcctgaaaaagta 257 |||||||||||||||||||| ||||||||||| ||||| || || || ||||| |||||| Sbjct: 965 ggtcgatatggaaacttggggcttggtgatcgcaatgatcggttggtacctgagaaagta 1024 Query: 258 tcttcggtggagggagacaagatggtgcttgttgcatgcggatggcgccataccattact 317 ||||| ||||||||||| |||||||||||| ||||||| |||||||||||||| |||||| Sbjct: 1025 tcttctgtggagggagagaagatggtgcttattgcatgtggatggcgccatacaattact 1084 Query: 318 gtttcctcctccggtagtttgtacacttacggttggagtaaatatggtcagcttggtcat 377 ||||| ||||| ||||||||||| ||||| |||||||| ||||||||||| || || ||| Sbjct: 1085 gtttcttcctctggtagtttgtatacttatggttggagcaaatatggtcaactagggcat 1144 Query: 378 ggcgattttgaagatcatctagttccacataaagtagaagccttaaaggatagctctaca 437 || ||||||||||||||| |||||||||||||| |||| ||||||||||||||||||| | Sbjct: 1145 ggtgattttgaagatcatttagttccacataaactagaggccttaaaggatagctctata 1204 Query: 438 tcccagatttcaggtggatggaggcacacaatggcacttacatcagatggaaaactttat 497 || ||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||| Sbjct: 1205 tcgcagatttcaggtggatggaggcatacaatggcgcttacatcagatggaaagctttat 1264 Query: 498 ggatggggatggaacaagtttgggcaagttggagctggcgataatgctgatcactgttcc 557 || ||||| |||||||||||||||||||| |||| ||| |||| || ||||||||||| | Sbjct: 1265 ggttgggggtggaacaagtttgggcaagtcggagttggtgatactgatgatcactgtttc 1324 Query: 558 ccagcccaggttaattttcctgaggaacagaaagttgcccaagttgcttgtggatggagg 617 |||| ||||| || ||||| ||||| ||||||||||||||||||||||| || |||||| Sbjct: 1325 ccagtacaggtcaagtttccagaggatcagaaagttgcccaagttgcttgcgggtggagg 1384 Query: 618 cacactcttgctttcacagaaaagaaaaatgtgtttgcatggggaaggggtactagtgga 677 || |||||||| || ||||||||||||||||| || ||||||| ||||||||||| ||| Sbjct: 1385 catactcttgcatttacagaaaagaaaaatgttttctcatgggggaggggtactagcgga 1444 Query: 678 caactcggtcatgg 691 ||||| |||||||| Sbjct: 1445 caacttggtcatgg 1458
>gb|AY108662.1| Zea mays PCO146921 mRNA sequence Length = 2037 Score = 519 bits (262), Expect = e-144 Identities = 454/518 (87%) Strand = Plus / Plus Query: 14 ggccggtgaagtgctcagttgggggcgtaaccaaaatggccagcttggtcttggaactac 73 |||||| ||||||| |||||||| ||||||||||| || ||||| || |||||||| || Sbjct: 750 ggccggagaagtgcagagttggggccgtaaccaaaacggacagctaggccttggaaccac 809 Query: 74 tgaagattcgctgctcccacaaacgattcaagcttttgagggtatttctgtgaagatgat 133 |||||| |||||||||||||||| |||||| ||||||||| || ||| ||||| ||||| Sbjct: 810 tgaagactcgctgctcccacaaaagattcaggcttttgagagtgtttgcgtgaaaatgat 869 Query: 134 tgctgctggtgccgaacatactgctgcagtaactgaagatggcgatatctatggatgggg 193 |||||| |||||||||||||||||||||||||||||||| || || |||| |||||||| Sbjct: 870 tgctgccggtgccgaacatactgctgcagtaactgaagacggtgacctctacggatgggg 929 Query: 194 ctggggtcgatatggaaacttgggtcttggtgatcggaatgaccgatttgttcctgaaaa 253 |||||||||||||||||||| ||||||||||| || |||||||| || |||||||||| Sbjct: 930 ttggggtcgatatggaaacttaggtcttggtgaccgtaatgaccgtttgcttcctgaaaa 989 Query: 254 agtatcttcggtggagggagacaagatggtgcttgttgcatgcggatggcgccataccat 313 ||||||||| |||||||| || |||||||||||||| ||||| |||||||||||||| || Sbjct: 990 agtatcttctgtggagggtgagaagatggtgcttgtggcatgtggatggcgccatacaat 1049 Query: 314 tactgtttcctcctccggtagtttgtacacttacggttggagtaaatatggtcagcttgg 373 ||| ||||| ||| |||| | |||||||||| |||||||| |||||||||||||| || Sbjct: 1050 tacggtttctgactctggtaatctgtacacttatggttggagcaaatatggtcagctagg 1109 Query: 374 tcatggcgattttgaagatcatctagttccacataaagtagaagccttaaaggatagctc 433 ||||| ||||||||||||||| |||||||||||||||||||||| || || |||||| | Sbjct: 1110 gcatggtgattttgaagatcatttagttccacataaagtagaagctttgaaagatagcac 1169 Query: 434 tacatcccagatttcaggtggatggaggcacacaatggcacttacatcagatggaaaact 493 || ||||||||||||||| || |||||||| || ||||||||||||||||| ||||| || Sbjct: 1170 tatatcccagatttcaggcggctggaggcatacgatggcacttacatcagagggaaagct 1229 Query: 494 ttatggatggggatggaacaagtttgggcaagttggag 531 ||| |||||||||||||||||||| || ||||| |||| Sbjct: 1230 ttacggatggggatggaacaagttcggacaagtcggag 1267
>ref|XM_506822.1| PREDICTED Oryza sativa (japonica cultivar-group), P0470G10.15 mRNA Length = 1691 Score = 387 bits (195), Expect = e-104 Identities = 495/595 (83%) Strand = Plus / Plus Query: 85 tgctcccacaaacgattcaagcttttgagggtatttctgtgaagatgattgctgctggtg 144 |||||||||||| ||||||||||||||||||| | ||| || |||||||||||||||| Sbjct: 558 tgctcccacaaaagattcaagcttttgagggtgtccgtgtaaaaatgattgctgctggtg 617 Query: 145 ccgaacatactgctgcagtaactgaagatggcgatatctatggatggggctggggtcgat 204 |||| || || ||||| ||||| |||||||| ||| |||| || |||||||||||||| | Sbjct: 618 ccgagcacaccgctgctgtaacagaagatggtgatctctacggttggggctggggtcggt 677 Query: 205 atggaaacttgggtcttggtgatcggaatgaccgatttgttcctgaaaaagtatcttcgg 264 |||| |||||||| || || ||||| ||||||| || | || |||||||| ||||| | Sbjct: 678 atggcaacttgggactaggcgatcgcgatgaccgcttaatcccagaaaaagtttcttctg 737 Query: 265 tggagggagacaagatggtgcttgttgcatgcggatggcgccataccattactgtttcct 324 || | || | |||||||||||||| || ||||| |||||||||||||| || || |||| Sbjct: 738 tgaatggtcaaaagatggtgcttgtagcgtgcgggtggcgccataccatcaccgtgtcct 797 Query: 325 cctccggtagtttgtacacttacggttggagtaaatatggtcagcttggtcatggcgatt 384 |||||||||| | ||||| || || ||||| || ||||||||||| || ||||| |||| Sbjct: 798 cctccggtagcatctacacatatggatggagcaagtatggtcagctagggcatggtgatt 857 Query: 385 ttgaagatcatctagttccacataaagtagaagccttaaaggatagctctacatcccaga 444 |||| ||||| || |||||||| || | ||||| || ||||||| ||| ||| || | Sbjct: 858 ttgaggatcacctggttccacacaagttggaagcattgaaggatactactatatctcaaa 917 Query: 445 tttcaggtggatggaggcacacaatggcacttacatcagatggaaaactttatggatggg 504 |||||||||| |||||||| |||||||||||| || ||||||| ||||| |||||||||| Sbjct: 918 tttcaggtgggtggaggcatacaatggcacttgcagcagatgggaaactctatggatggg 977 Query: 505 gatggaacaagtttgggcaagttggagctggcgataatgctgatcactgttccccagccc 564 |||||||||||||||| ||||| || | ||||||||||| |||||||| ||||| | | Sbjct: 978 gatggaacaagtttggacaagtcggtgttggcgataatgaagatcactgctccccggtgc 1037 Query: 565 aggttaattttcctgaggaacagaaagttgcccaagttgcttgtggatggaggcacactc 624 |||| |||||||| | ||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1038 aggtcaattttccaaacgaacagaaagttgttcaagttgcttgtggatggaggcacactc 1097 Query: 625 ttgctttcacagaaaagaaaaatgtgtttgcatggggaaggggtactagtggaca 679 |||| | |||||| |||||||| || ||||||||||||| || |||||||| Sbjct: 1098 ttgccctgacagaagccaaaaatgttttctcatggggaaggggcaccagtggaca 1152
>ref|XM_466189.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1675 Score = 387 bits (195), Expect = e-104 Identities = 495/595 (83%) Strand = Plus / Plus Query: 85 tgctcccacaaacgattcaagcttttgagggtatttctgtgaagatgattgctgctggtg 144 |||||||||||| ||||||||||||||||||| | ||| || |||||||||||||||| Sbjct: 559 tgctcccacaaaagattcaagcttttgagggtgtccgtgtaaaaatgattgctgctggtg 618 Query: 145 ccgaacatactgctgcagtaactgaagatggcgatatctatggatggggctggggtcgat 204 |||| || || ||||| ||||| |||||||| ||| |||| || |||||||||||||| | Sbjct: 619 ccgagcacaccgctgctgtaacagaagatggtgatctctacggttggggctggggtcggt 678 Query: 205 atggaaacttgggtcttggtgatcggaatgaccgatttgttcctgaaaaagtatcttcgg 264 |||| |||||||| || || ||||| ||||||| || | || |||||||| ||||| | Sbjct: 679 atggcaacttgggactaggcgatcgcgatgaccgcttaatcccagaaaaagtttcttctg 738 Query: 265 tggagggagacaagatggtgcttgttgcatgcggatggcgccataccattactgtttcct 324 || | || | |||||||||||||| || ||||| |||||||||||||| || || |||| Sbjct: 739 tgaatggtcaaaagatggtgcttgtagcgtgcgggtggcgccataccatcaccgtgtcct 798 Query: 325 cctccggtagtttgtacacttacggttggagtaaatatggtcagcttggtcatggcgatt 384 |||||||||| | ||||| || || ||||| || ||||||||||| || ||||| |||| Sbjct: 799 cctccggtagcatctacacatatggatggagcaagtatggtcagctagggcatggtgatt 858 Query: 385 ttgaagatcatctagttccacataaagtagaagccttaaaggatagctctacatcccaga 444 |||| ||||| || |||||||| || | ||||| || ||||||| ||| ||| || | Sbjct: 859 ttgaggatcacctggttccacacaagttggaagcattgaaggatactactatatctcaaa 918 Query: 445 tttcaggtggatggaggcacacaatggcacttacatcagatggaaaactttatggatggg 504 |||||||||| |||||||| |||||||||||| || ||||||| ||||| |||||||||| Sbjct: 919 tttcaggtgggtggaggcatacaatggcacttgcagcagatgggaaactctatggatggg 978 Query: 505 gatggaacaagtttgggcaagttggagctggcgataatgctgatcactgttccccagccc 564 |||||||||||||||| ||||| || | ||||||||||| |||||||| ||||| | | Sbjct: 979 gatggaacaagtttggacaagtcggtgttggcgataatgaagatcactgctccccggtgc 1038 Query: 565 aggttaattttcctgaggaacagaaagttgcccaagttgcttgtggatggaggcacactc 624 |||| |||||||| | ||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1039 aggtcaattttccaaacgaacagaaagttgttcaagttgcttgtggatggaggcacactc 1098 Query: 625 ttgctttcacagaaaagaaaaatgtgtttgcatggggaaggggtactagtggaca 679 |||| | |||||| |||||||| || ||||||||||||| || |||||||| Sbjct: 1099 ttgccctgacagaagccaaaaatgttttctcatggggaaggggcaccagtggaca 1153
>dbj|AK069920.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023039G23, full insert sequence Length = 1675 Score = 387 bits (195), Expect = e-104 Identities = 495/595 (83%) Strand = Plus / Plus Query: 85 tgctcccacaaacgattcaagcttttgagggtatttctgtgaagatgattgctgctggtg 144 |||||||||||| ||||||||||||||||||| | ||| || |||||||||||||||| Sbjct: 559 tgctcccacaaaagattcaagcttttgagggtgtccgtgtaaaaatgattgctgctggtg 618 Query: 145 ccgaacatactgctgcagtaactgaagatggcgatatctatggatggggctggggtcgat 204 |||| || || ||||| ||||| |||||||| ||| |||| || |||||||||||||| | Sbjct: 619 ccgagcacaccgctgctgtaacagaagatggtgatctctacggttggggctggggtcggt 678 Query: 205 atggaaacttgggtcttggtgatcggaatgaccgatttgttcctgaaaaagtatcttcgg 264 |||| |||||||| || || ||||| ||||||| || | || |||||||| ||||| | Sbjct: 679 atggcaacttgggactaggcgatcgcgatgaccgcttaatcccagaaaaagtttcttctg 738 Query: 265 tggagggagacaagatggtgcttgttgcatgcggatggcgccataccattactgtttcct 324 || | || | |||||||||||||| || ||||| |||||||||||||| || || |||| Sbjct: 739 tgaatggtcaaaagatggtgcttgtagcgtgcgggtggcgccataccatcaccgtgtcct 798 Query: 325 cctccggtagtttgtacacttacggttggagtaaatatggtcagcttggtcatggcgatt 384 |||||||||| | ||||| || || ||||| || ||||||||||| || ||||| |||| Sbjct: 799 cctccggtagcatctacacatatggatggagcaagtatggtcagctagggcatggtgatt 858 Query: 385 ttgaagatcatctagttccacataaagtagaagccttaaaggatagctctacatcccaga 444 |||| ||||| || |||||||| || | ||||| || ||||||| ||| ||| || | Sbjct: 859 ttgaggatcacctggttccacacaagttggaagcattgaaggatactactatatctcaaa 918 Query: 445 tttcaggtggatggaggcacacaatggcacttacatcagatggaaaactttatggatggg 504 |||||||||| |||||||| |||||||||||| || ||||||| ||||| |||||||||| Sbjct: 919 tttcaggtgggtggaggcatacaatggcacttgcagcagatgggaaactctatggatggg 978 Query: 505 gatggaacaagtttgggcaagttggagctggcgataatgctgatcactgttccccagccc 564 |||||||||||||||| ||||| || | ||||||||||| |||||||| ||||| | | Sbjct: 979 gatggaacaagtttggacaagtcggtgttggcgataatgaagatcactgctccccggtgc 1038 Query: 565 aggttaattttcctgaggaacagaaagttgcccaagttgcttgtggatggaggcacactc 624 |||| |||||||| | ||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1039 aggtcaattttccaaacgaacagaaagttgttcaagttgcttgtggatggaggcacactc 1098 Query: 625 ttgctttcacagaaaagaaaaatgtgtttgcatggggaaggggtactagtggaca 679 |||| | |||||| |||||||| || ||||||||||||| || |||||||| Sbjct: 1099 ttgccctgacagaagccaaaaatgttttctcatggggaaggggcaccagtggaca 1153
>dbj|AK060250.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-004-B02, full insert sequence Length = 1691 Score = 371 bits (187), Expect = 2e-99 Identities = 493/595 (82%) Strand = Plus / Plus Query: 85 tgctcccacaaacgattcaagcttttgagggtatttctgtgaagatgattgctgctggtg 144 |||||||||||| ||||||||||||||||||| | ||| || |||||||||||||||| Sbjct: 558 tgctcccacaaaagattcaagcttttgagggtgtccgtgtaaaaatgattgctgctggtg 617 Query: 145 ccgaacatactgctgcagtaactgaagatggcgatatctatggatggggctggggtcgat 204 |||| || || ||||| ||||| |||||||| ||| |||| || |||||||||||||| | Sbjct: 618 ccgagcacaccgctgctgtaacagaagatggtgatctctacggttggggctggggtcggt 677 Query: 205 atggaaacttgggtcttggtgatcggaatgaccgatttgttcctgaaaaagtatcttcgg 264 |||| |||||||| || || ||||| ||||||| || | || ||||| || ||||| | Sbjct: 678 atggcaacttgggactaggcgatcgcgatgaccgcttaatcccagaaaaggtttcttccg 737 Query: 265 tggagggagacaagatggtgcttgttgcatgcggatggcgccataccattactgtttcct 324 || | || | |||||||||||||| || ||||| |||||||||||||| || || |||| Sbjct: 738 tgaatggtcaaaagatggtgcttgtagcgtgcgggtggcgccataccatcaccgtgtcct 797 Query: 325 cctccggtagtttgtacacttacggttggagtaaatatggtcagcttggtcatggcgatt 384 |||||||||| | ||||| || || ||||| || ||||||||||| || ||||| |||| Sbjct: 798 cctccggtagcgtctacacatatggatggagcaagtatggtcagctagggcatggtgatt 857 Query: 385 ttgaagatcatctagttccacataaagtagaagccttaaaggatagctctacatcccaga 444 |||| ||||| || |||||||| || | ||||| || ||||||| ||| ||| || | Sbjct: 858 ttgaggatcacctggttccacacaagttggaagcattgaaggatactactatatctcaaa 917 Query: 445 tttcaggtggatggaggcacacaatggcacttacatcagatggaaaactttatggatggg 504 |||||||||| |||||||| |||||||||||| || ||||||| ||||| |||||||||| Sbjct: 918 tttcaggtgggtggaggcatacaatggcacttgcagcagatgggaaactctatggatggg 977 Query: 505 gatggaacaagtttgggcaagttggagctggcgataatgctgatcactgttccccagccc 564 |||||||||||||||| ||||| || | ||||||||||| |||| ||| ||||| | | Sbjct: 978 gatggaacaagtttggacaagtcggtgttggcgataatgaagatcgctgctccccggtgc 1037 Query: 565 aggttaattttcctgaggaacagaaagttgcccaagttgcttgtggatggaggcacactc 624 |||| |||||||| | ||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1038 aggtcaattttccaaacgaacagaaagttgttcaagttgcttgtggatggaggcacactc 1097 Query: 625 ttgctttcacagaaaagaaaaatgtgtttgcatggggaaggggtactagtggaca 679 |||| | |||||| |||||||| || ||||||||||||| || |||||||| Sbjct: 1098 ttgccctgacagaagccaaaaatgttttctcatggggaaggggcaccagtggaca 1152
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 206 bits (104), Expect = 7e-50 Identities = 152/168 (90%) Strand = Plus / Plus Query: 268 agggagacaagatggtgcttgttgcatgcggatggcgccataccattactgtttcctcct 327 ||||||| |||||||||||| ||||||| |||||||||||||| ||||||||||| |||| Sbjct: 21694169 agggagagaagatggtgcttattgcatgtggatggcgccatacaattactgtttcttcct 21694228 Query: 328 ccggtagtttgtacacttacggttggagtaaatatggtcagcttggtcatggcgattttg 387 | ||||||||||| ||||| |||||||| ||||||||||| || || ||||| ||||||| Sbjct: 21694229 ctggtagtttgtatacttatggttggagcaaatatggtcaactagggcatggtgattttg 21694288 Query: 388 aagatcatctagttccacataaagtagaagccttaaaggatagctcta 435 |||||||| |||||||||||||| |||| ||||||||||||||||||| Sbjct: 21694289 aagatcatttagttccacataaactagaggccttaaaggatagctcta 21694336 Score = 184 bits (93), Expect = 3e-43 Identities = 135/149 (90%) Strand = Plus / Plus Query: 122 tgtgaagatgattgctgctggtgccgaacatactgctgcagtaactgaagatggcgatat 181 |||||| ||||||||||||||||| |||||||| |||||||||||||||||||| || | Sbjct: 21692913 tgtgaaaatgattgctgctggtgctgaacataccgctgcagtaactgaagatggtgacct 21692972 Query: 182 ctatggatggggctggggtcgatatggaaacttgggtcttggtgatcggaatgaccgatt 241 |||||||||||||||||||||||||||||||||||| ||||||||||| ||||| || || Sbjct: 21692973 ctatggatggggctggggtcgatatggaaacttggggcttggtgatcgcaatgatcggtt 21693032 Query: 242 tgttcctgaaaaagtatcttcggtggagg 270 || ||||| ||||||||||| ||||||| Sbjct: 21693033 ggtacctgagaaagtatcttctgtggagg 21693061 Score = 125 bits (63), Expect = 2e-25 Identities = 96/107 (89%) Strand = Plus / Plus Query: 585 cagaaagttgcccaagttgcttgtggatggaggcacactcttgctttcacagaaaagaaa 644 ||||||||||||||||||||||| || |||||||| |||||||| || |||||||||||| Sbjct: 21695470 cagaaagttgcccaagttgcttgcgggtggaggcatactcttgcatttacagaaaagaaa 21695529 Query: 645 aatgtgtttgcatggggaaggggtactagtggacaactcggtcatgg 691 ||||| || ||||||| ||||||||||| |||||||| |||||||| Sbjct: 21695530 aatgttttctcatgggggaggggtactagcggacaacttggtcatgg 21695576 Score = 107 bits (54), Expect = 5e-20 Identities = 69/74 (93%) Strand = Plus / Plus Query: 442 agatttcaggtggatggaggcacacaatggcacttacatcagatggaaaactttatggat 501 |||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||| | Sbjct: 21694483 agatttcaggtggatggaggcatacaatggcgcttacatcagatggaaagctttatggtt 21694542 Query: 502 ggggatggaacaag 515 |||| ||||||||| Sbjct: 21694543 gggggtggaacaag 21694556 Score = 97.6 bits (49), Expect = 5e-17 Identities = 76/85 (89%) Strand = Plus / Plus Query: 30 agttgggggcgtaaccaaaatggccagcttggtcttggaactactgaagattcgctgctc 89 ||||||||||| |||||||| || ||||||||||||||||| |||||||| || ||||| Sbjct: 21692342 agttgggggcgcaaccaaaacggacagcttggtcttggaaccactgaagactcattgctc 21692401 Query: 90 ccacaaacgattcaagcttttgagg 114 ||||||| ||||||| ||||||||| Sbjct: 21692402 ccacaaaagattcaatcttttgagg 21692426 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Plus Query: 514 agtttgggcaagttggagctggcgataatgctgatcactgttccccagcccaggttaatt 573 ||||||||||||| |||| ||| |||| || ||||||||||| ||||| ||||| || | Sbjct: 21695287 agtttgggcaagtcggagttggtgatactgatgatcactgtttcccagtacaggtcaagt 21695346 Query: 574 ttcctgagga 583 |||| ||||| Sbjct: 21695347 ttccagagga 21695356
>emb|AL606592.2|OSJN00024 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0006B20, complete sequence Length = 141915 Score = 206 bits (104), Expect = 7e-50 Identities = 152/168 (90%) Strand = Plus / Plus Query: 268 agggagacaagatggtgcttgttgcatgcggatggcgccataccattactgtttcctcct 327 ||||||| |||||||||||| ||||||| |||||||||||||| ||||||||||| |||| Sbjct: 5786 agggagagaagatggtgcttattgcatgtggatggcgccatacaattactgtttcttcct 5845 Query: 328 ccggtagtttgtacacttacggttggagtaaatatggtcagcttggtcatggcgattttg 387 | ||||||||||| ||||| |||||||| ||||||||||| || || ||||| ||||||| Sbjct: 5846 ctggtagtttgtatacttatggttggagcaaatatggtcaactagggcatggtgattttg 5905 Query: 388 aagatcatctagttccacataaagtagaagccttaaaggatagctcta 435 |||||||| |||||||||||||| |||| ||||||||||||||||||| Sbjct: 5906 aagatcatttagttccacataaactagaggccttaaaggatagctcta 5953 Score = 184 bits (93), Expect = 3e-43 Identities = 135/149 (90%) Strand = Plus / Plus Query: 122 tgtgaagatgattgctgctggtgccgaacatactgctgcagtaactgaagatggcgatat 181 |||||| ||||||||||||||||| |||||||| |||||||||||||||||||| || | Sbjct: 4530 tgtgaaaatgattgctgctggtgctgaacataccgctgcagtaactgaagatggtgacct 4589 Query: 182 ctatggatggggctggggtcgatatggaaacttgggtcttggtgatcggaatgaccgatt 241 |||||||||||||||||||||||||||||||||||| ||||||||||| ||||| || || Sbjct: 4590 ctatggatggggctggggtcgatatggaaacttggggcttggtgatcgcaatgatcggtt 4649 Query: 242 tgttcctgaaaaagtatcttcggtggagg 270 || ||||| ||||||||||| ||||||| Sbjct: 4650 ggtacctgagaaagtatcttctgtggagg 4678 Score = 125 bits (63), Expect = 2e-25 Identities = 96/107 (89%) Strand = Plus / Plus Query: 585 cagaaagttgcccaagttgcttgtggatggaggcacactcttgctttcacagaaaagaaa 644 ||||||||||||||||||||||| || |||||||| |||||||| || |||||||||||| Sbjct: 7087 cagaaagttgcccaagttgcttgcgggtggaggcatactcttgcatttacagaaaagaaa 7146 Query: 645 aatgtgtttgcatggggaaggggtactagtggacaactcggtcatgg 691 ||||| || ||||||| ||||||||||| |||||||| |||||||| Sbjct: 7147 aatgttttctcatgggggaggggtactagcggacaacttggtcatgg 7193 Score = 107 bits (54), Expect = 5e-20 Identities = 69/74 (93%) Strand = Plus / Plus Query: 442 agatttcaggtggatggaggcacacaatggcacttacatcagatggaaaactttatggat 501 |||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||| | Sbjct: 6100 agatttcaggtggatggaggcatacaatggcgcttacatcagatggaaagctttatggtt 6159 Query: 502 ggggatggaacaag 515 |||| ||||||||| Sbjct: 6160 gggggtggaacaag 6173 Score = 97.6 bits (49), Expect = 5e-17 Identities = 76/85 (89%) Strand = Plus / Plus Query: 30 agttgggggcgtaaccaaaatggccagcttggtcttggaactactgaagattcgctgctc 89 ||||||||||| |||||||| || ||||||||||||||||| |||||||| || ||||| Sbjct: 3959 agttgggggcgcaaccaaaacggacagcttggtcttggaaccactgaagactcattgctc 4018 Query: 90 ccacaaacgattcaagcttttgagg 114 ||||||| ||||||| ||||||||| Sbjct: 4019 ccacaaaagattcaatcttttgagg 4043 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Plus Query: 514 agtttgggcaagttggagctggcgataatgctgatcactgttccccagcccaggttaatt 573 ||||||||||||| |||| ||| |||| || ||||||||||| ||||| ||||| || | Sbjct: 6904 agtttgggcaagtcggagttggtgatactgatgatcactgtttcccagtacaggtcaagt 6963 Query: 574 ttcctgagga 583 |||| ||||| Sbjct: 6964 ttccagagga 6973
>emb|AL606706.3|OSJN00063 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0086G13, complete sequence Length = 127952 Score = 184 bits (93), Expect = 3e-43 Identities = 135/149 (90%) Strand = Plus / Plus Query: 122 tgtgaagatgattgctgctggtgccgaacatactgctgcagtaactgaagatggcgatat 181 |||||| ||||||||||||||||| |||||||| |||||||||||||||||||| || | Sbjct: 127455 tgtgaaaatgattgctgctggtgctgaacataccgctgcagtaactgaagatggtgacct 127514 Query: 182 ctatggatggggctggggtcgatatggaaacttgggtcttggtgatcggaatgaccgatt 241 |||||||||||||||||||||||||||||||||||| ||||||||||| ||||| || || Sbjct: 127515 ctatggatggggctggggtcgatatggaaacttggggcttggtgatcgcaatgatcggtt 127574 Query: 242 tgttcctgaaaaagtatcttcggtggagg 270 || ||||| ||||||||||| ||||||| Sbjct: 127575 ggtacctgagaaagtatcttctgtggagg 127603 Score = 97.6 bits (49), Expect = 5e-17 Identities = 76/85 (89%) Strand = Plus / Plus Query: 30 agttgggggcgtaaccaaaatggccagcttggtcttggaactactgaagattcgctgctc 89 ||||||||||| |||||||| || ||||||||||||||||| |||||||| || ||||| Sbjct: 126884 agttgggggcgcaaccaaaacggacagcttggtcttggaaccactgaagactcattgctc 126943 Query: 90 ccacaaacgattcaagcttttgagg 114 ||||||| ||||||| ||||||||| Sbjct: 126944 ccacaaaagattcaatcttttgagg 126968
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 101 bits (51), Expect = 3e-18 Identities = 111/131 (84%) Strand = Plus / Plus Query: 276 aagatggtgcttgttgcatgcggatggcgccataccattactgtttcctcctccggtagt 335 |||||||||||||| || ||||| |||||||||||||| || || |||||||||||||| Sbjct: 20935954 aagatggtgcttgtagcgtgcgggtggcgccataccatcaccgtgtcctcctccggtagc 20936013 Query: 336 ttgtacacttacggttggagtaaatatggtcagcttggtcatggcgattttgaagatcat 395 | ||||| || || ||||| || ||||||||||| || ||||| |||||||| ||||| Sbjct: 20936014 atctacacatatggatggagcaagtatggtcagctagggcatggtgattttgaggatcac 20936073 Query: 396 ctagttccaca 406 || |||||||| Sbjct: 20936074 ctggttccaca 20936084 Score = 99.6 bits (50), Expect = 1e-17 Identities = 68/74 (91%) Strand = Plus / Plus Query: 442 agatttcaggtggatggaggcacacaatggcacttacatcagatggaaaactttatggat 501 ||||||||||||| |||||||| |||||||||||| || ||||||| ||||| ||||||| Sbjct: 20936276 agatttcaggtgggtggaggcatacaatggcacttgcagcagatgggaaactctatggat 20936335 Query: 502 ggggatggaacaag 515 |||||||||||||| Sbjct: 20936336 ggggatggaacaag 20936349 Score = 91.7 bits (46), Expect = 3e-15 Identities = 94/110 (85%) Strand = Plus / Plus Query: 129 atgattgctgctggtgccgaacatactgctgcagtaactgaagatggcgatatctatgga 188 |||||||||||||||||||| || || ||||| ||||| |||||||| ||| |||| || Sbjct: 20935557 atgattgctgctggtgccgagcacaccgctgctgtaacagaagatggtgatctctacggt 20935616 Query: 189 tggggctggggtcgatatggaaacttgggtcttggtgatcggaatgaccg 238 |||||||||||||| ||||| |||||||| || || ||||| ||||||| Sbjct: 20935617 tggggctggggtcggtatggcaacttgggactaggcgatcgcgatgaccg 20935666 Score = 85.7 bits (43), Expect = 2e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 585 cagaaagttgcccaagttgcttgtggatggaggcacactcttgctttcacagaaaagaaa 644 |||||||||| |||||||||||||||||||||||||||||||| | |||||| ||| Sbjct: 20937319 cagaaagttgttcaagttgcttgtggatggaggcacactcttgccctgacagaagccaaa 20937378 Query: 645 aatgtgtttgcatggggaaggggtactagtggaca 679 ||||| || ||||||||||||| || |||||||| Sbjct: 20937379 aatgttttctcatggggaaggggcaccagtggaca 20937413 Score = 54.0 bits (27), Expect = 6e-04 Identities = 72/87 (82%) Strand = Plus / Plus Query: 28 tcagttgggggcgtaaccaaaatggccagcttggtcttggaactactgaagattcgctgc 87 |||| ||||| || || |||||||| |||||||| || |||| || || || || ||| Sbjct: 20934679 tcagctggggacgcaatcaaaatggtcagcttggcctcggaaacaccgaggactccttgc 20934738 Query: 88 tcccacaaacgattcaagcttttgagg 114 ||||||||| ||||||||||||||||| Sbjct: 20934739 tcccacaaaagattcaagcttttgagg 20934765 Score = 40.1 bits (20), Expect = 9.5 Identities = 53/64 (82%) Strand = Plus / Plus Query: 514 agtttgggcaagttggagctggcgataatgctgatcactgttccccagcccaggttaatt 573 ||||||| ||||| || | ||||||||||| |||||||| ||||| | ||||| |||| Sbjct: 20937010 agtttggacaagtcggtgttggcgataatgaagatcactgctccccggtgcaggtcaatt 20937069 Query: 574 ttcc 577 |||| Sbjct: 20937070 ttcc 20937073
>dbj|AP004876.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0470G10 Length = 145419 Score = 101 bits (51), Expect = 3e-18 Identities = 111/131 (84%) Strand = Plus / Plus Query: 276 aagatggtgcttgttgcatgcggatggcgccataccattactgtttcctcctccggtagt 335 |||||||||||||| || ||||| |||||||||||||| || || |||||||||||||| Sbjct: 59426 aagatggtgcttgtagcgtgcgggtggcgccataccatcaccgtgtcctcctccggtagc 59485 Query: 336 ttgtacacttacggttggagtaaatatggtcagcttggtcatggcgattttgaagatcat 395 | ||||| || || ||||| || ||||||||||| || ||||| |||||||| ||||| Sbjct: 59486 atctacacatatggatggagcaagtatggtcagctagggcatggtgattttgaggatcac 59545 Query: 396 ctagttccaca 406 || |||||||| Sbjct: 59546 ctggttccaca 59556 Score = 99.6 bits (50), Expect = 1e-17 Identities = 68/74 (91%) Strand = Plus / Plus Query: 442 agatttcaggtggatggaggcacacaatggcacttacatcagatggaaaactttatggat 501 ||||||||||||| |||||||| |||||||||||| || ||||||| ||||| ||||||| Sbjct: 59748 agatttcaggtgggtggaggcatacaatggcacttgcagcagatgggaaactctatggat 59807 Query: 502 ggggatggaacaag 515 |||||||||||||| Sbjct: 59808 ggggatggaacaag 59821 Score = 91.7 bits (46), Expect = 3e-15 Identities = 94/110 (85%) Strand = Plus / Plus Query: 129 atgattgctgctggtgccgaacatactgctgcagtaactgaagatggcgatatctatgga 188 |||||||||||||||||||| || || ||||| ||||| |||||||| ||| |||| || Sbjct: 59029 atgattgctgctggtgccgagcacaccgctgctgtaacagaagatggtgatctctacggt 59088 Query: 189 tggggctggggtcgatatggaaacttgggtcttggtgatcggaatgaccg 238 |||||||||||||| ||||| |||||||| || || ||||| ||||||| Sbjct: 59089 tggggctggggtcggtatggcaacttgggactaggcgatcgcgatgaccg 59138 Score = 85.7 bits (43), Expect = 2e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 585 cagaaagttgcccaagttgcttgtggatggaggcacactcttgctttcacagaaaagaaa 644 |||||||||| |||||||||||||||||||||||||||||||| | |||||| ||| Sbjct: 60791 cagaaagttgttcaagttgcttgtggatggaggcacactcttgccctgacagaagccaaa 60850 Query: 645 aatgtgtttgcatggggaaggggtactagtggaca 679 ||||| || ||||||||||||| || |||||||| Sbjct: 60851 aatgttttctcatggggaaggggcaccagtggaca 60885 Score = 54.0 bits (27), Expect = 6e-04 Identities = 72/87 (82%) Strand = Plus / Plus Query: 28 tcagttgggggcgtaaccaaaatggccagcttggtcttggaactactgaagattcgctgc 87 |||| ||||| || || |||||||| |||||||| || |||| || || || || ||| Sbjct: 58151 tcagctggggacgcaatcaaaatggtcagcttggcctcggaaacaccgaggactccttgc 58210 Query: 88 tcccacaaacgattcaagcttttgagg 114 ||||||||| ||||||||||||||||| Sbjct: 58211 tcccacaaaagattcaagcttttgagg 58237 Score = 40.1 bits (20), Expect = 9.5 Identities = 53/64 (82%) Strand = Plus / Plus Query: 514 agtttgggcaagttggagctggcgataatgctgatcactgttccccagcccaggttaatt 573 ||||||| ||||| || | ||||||||||| |||||||| ||||| | ||||| |||| Sbjct: 60482 agtttggacaagtcggtgttggcgataatgaagatcactgctccccggtgcaggtcaatt 60541 Query: 574 ttcc 577 |||| Sbjct: 60542 ttcc 60545
>ref|NM_125781.2| Arabidopsis thaliana UVR8 (UVB-RESISTANCE 8) AT5G63860 (UVR8) mRNA, complete cds Length = 1801 Score = 95.6 bits (48), Expect = 2e-16 Identities = 102/120 (85%) Strand = Plus / Plus Query: 133 ttgctgctggtgccgaacatactgctgcagtaactgaagatggcgatatctatggatggg 192 ||||||||||||| ||||| ||||||||||| || |||||||| || |||||||||||| Sbjct: 695 ttgctgctggtgcagaacacactgctgcagttacagaagatggtgacctctatggatggg 754 Query: 193 gctggggtcgatatggaaacttgggtcttggtgatcggaatgaccgatttgttcctgaaa 252 ||||||| |||| ||||| ||||| | ||||| |||| |||||| || |||||||||| Sbjct: 755 gctggggaagatacggaaatttgggattaggtgaccggactgaccgcttagttcctgaaa 814 Score = 83.8 bits (42), Expect = 7e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 438 tcccagatttcaggtggatggaggcacacaatggcacttacatcagatggaaaactttat 497 ||||||||||| || || ||||| || ||||||||| | || |||||||||||||| ||| Sbjct: 1000 tcccagatttcgggaggttggagacatacaatggcattgacttcagatggaaaactatat 1059 Query: 498 ggatggggatggaacaagtttgggcaagttggag 531 |||||||| ||||| |||||||| ||||| |||| Sbjct: 1060 ggatggggttggaataagtttggacaagtaggag 1093
>gb|BT000600.1| Arabidopsis thaliana UVB-resistance protein UVR8 (At5g63860/MGI19_6) mRNA, complete cds Length = 1323 Score = 95.6 bits (48), Expect = 2e-16 Identities = 102/120 (85%) Strand = Plus / Plus Query: 133 ttgctgctggtgccgaacatactgctgcagtaactgaagatggcgatatctatggatggg 192 ||||||||||||| ||||| ||||||||||| || |||||||| || |||||||||||| Sbjct: 530 ttgctgctggtgcagaacacactgctgcagttacagaagatggtgacctctatggatggg 589 Query: 193 gctggggtcgatatggaaacttgggtcttggtgatcggaatgaccgatttgttcctgaaa 252 ||||||| |||| ||||| ||||| | ||||| |||| |||||| || |||||||||| Sbjct: 590 gctggggaagatacggaaatttgggattaggtgaccggactgaccgcttagttcctgaaa 649 Score = 83.8 bits (42), Expect = 7e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 438 tcccagatttcaggtggatggaggcacacaatggcacttacatcagatggaaaactttat 497 ||||||||||| || || ||||| || ||||||||| | || |||||||||||||| ||| Sbjct: 835 tcccagatttcgggaggttggagacatacaatggcattgacttcagatggaaaactatat 894 Query: 498 ggatggggatggaacaagtttgggcaagttggag 531 |||||||| ||||| |||||||| ||||| |||| Sbjct: 895 ggatggggttggaataagtttggacaagtaggag 928
>gb|AF130442.1| Arabidopsis thaliana chromosome V genomic sequence Length = 21845 Score = 95.6 bits (48), Expect = 2e-16 Identities = 102/120 (85%) Strand = Plus / Minus Query: 133 ttgctgctggtgccgaacatactgctgcagtaactgaagatggcgatatctatggatggg 192 ||||||||||||| ||||| ||||||||||| || |||||||| || |||||||||||| Sbjct: 7593 ttgctgctggtgcagaacacactgctgcagttacagaagatggtgacctctatggatggg 7534 Query: 193 gctggggtcgatatggaaacttgggtcttggtgatcggaatgaccgatttgttcctgaaa 252 ||||||| |||| ||||| ||||| | ||||| |||| |||||| || |||||||||| Sbjct: 7533 gctggggaagatacggaaatttgggattaggtgaccggactgaccgcttagttcctgaaa 7474 Score = 63.9 bits (32), Expect = 7e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 440 ccagatttcaggtggatggaggcacacaatggcacttacatcagatggaaaactttatgg 499 ||||||||| || || ||||| || ||||||||| | || |||||||||||||| ||||| Sbjct: 6674 ccagatttcgggaggttggagacatacaatggcattgacttcagatggaaaactatatgg 6615 Query: 500 atggggatggaa 511 |||||| ||||| Sbjct: 6614 atggggttggaa 6603
>gb|AF130441.1| Arabidopsis thaliana UVB-resistance protein UVR8 (UVR8) mRNA, complete cds Length = 1818 Score = 95.6 bits (48), Expect = 2e-16 Identities = 102/120 (85%) Strand = Plus / Plus Query: 133 ttgctgctggtgccgaacatactgctgcagtaactgaagatggcgatatctatggatggg 192 ||||||||||||| ||||| ||||||||||| || |||||||| || |||||||||||| Sbjct: 695 ttgctgctggtgcagaacacactgctgcagttacagaagatggtgacctctatggatggg 754 Query: 193 gctggggtcgatatggaaacttgggtcttggtgatcggaatgaccgatttgttcctgaaa 252 ||||||| |||| ||||| ||||| | ||||| |||| |||||| || |||||||||| Sbjct: 755 gctggggaagatacggaaatttgggattaggtgaccggactgaccgcttagttcctgaaa 814 Score = 83.8 bits (42), Expect = 7e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 438 tcccagatttcaggtggatggaggcacacaatggcacttacatcagatggaaaactttat 497 ||||||||||| || || ||||| || ||||||||| | || |||||||||||||| ||| Sbjct: 1000 tcccagatttcgggaggttggagacatacaatggcattgacttcagatggaaaactatat 1059 Query: 498 ggatggggatggaacaagtttgggcaagttggag 531 |||||||| ||||| |||||||| ||||| |||| Sbjct: 1060 ggatggggttggaataagtttggacaagtaggag 1093
>gb|AY125497.1| Arabidopsis thaliana AT5g63860/MGI19_6 mRNA, complete cds Length = 3155 Score = 95.6 bits (48), Expect = 2e-16 Identities = 102/120 (85%) Strand = Plus / Plus Query: 133 ttgctgctggtgccgaacatactgctgcagtaactgaagatggcgatatctatggatggg 192 ||||||||||||| ||||| ||||||||||| || |||||||| || |||||||||||| Sbjct: 613 ttgctgctggtgcagaacacactgctgcagttacagaagatggtgacctctatggatggg 672 Query: 193 gctggggtcgatatggaaacttgggtcttggtgatcggaatgaccgatttgttcctgaaa 252 ||||||| |||| ||||| ||||| | ||||| |||| |||||| || |||||||||| Sbjct: 673 gctggggaagatacggaaatttgggattaggtgaccggactgaccgcttagttcctgaaa 732 Score = 83.8 bits (42), Expect = 7e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 438 tcccagatttcaggtggatggaggcacacaatggcacttacatcagatggaaaactttat 497 ||||||||||| || || ||||| || ||||||||| | || |||||||||||||| ||| Sbjct: 918 tcccagatttcgggaggttggagacatacaatggcattgacttcagatggaaaactatat 977 Query: 498 ggatggggatggaacaagtttgggcaagttggag 531 |||||||| ||||| |||||||| ||||| |||| Sbjct: 978 ggatggggttggaataagtttggacaagtaggag 1011
>dbj|AB007646.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MGI19 Length = 37225 Score = 95.6 bits (48), Expect = 2e-16 Identities = 102/120 (85%) Strand = Plus / Minus Query: 133 ttgctgctggtgccgaacatactgctgcagtaactgaagatggcgatatctatggatggg 192 ||||||||||||| ||||| ||||||||||| || |||||||| || |||||||||||| Sbjct: 20425 ttgctgctggtgcagaacacactgctgcagttacagaagatggtgacctctatggatggg 20366 Query: 193 gctggggtcgatatggaaacttgggtcttggtgatcggaatgaccgatttgttcctgaaa 252 ||||||| |||| ||||| ||||| | ||||| |||| |||||| || |||||||||| Sbjct: 20365 gctggggaagatacggaaatttgggattaggtgaccggactgaccgcttagttcctgaaa 20306 Score = 63.9 bits (32), Expect = 7e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 440 ccagatttcaggtggatggaggcacacaatggcacttacatcagatggaaaactttatgg 499 ||||||||| || || ||||| || ||||||||| | || |||||||||||||| ||||| Sbjct: 19506 ccagatttcgggaggttggagacatacaatggcattgacttcagatggaaaactatatgg 19447 Query: 500 atggggatggaa 511 |||||| ||||| Sbjct: 19446 atggggttggaa 19435
>emb|BX831176.1|CNS0A0PB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS65ZC03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1581 Score = 91.7 bits (46), Expect = 3e-15 Identities = 100/118 (84%) Strand = Plus / Plus Query: 133 ttgctgctggtgccgaacatactgctgcagtaactgaagatggcgatatctatggatggg 192 ||||||||||||| ||||| ||||||||||| || |||||||| || |||||||||||| Sbjct: 544 ttgctgctggtgcagaacacactgctgcagttacagaagatggtgacctctatggatggg 603 Query: 193 gctggggtcgatatggaaacttgggtcttggtgatcggaatgaccgatttgttcctga 250 ||||||| |||| ||||| ||||| | ||||| |||| |||||| || |||||||| Sbjct: 604 gctggggaagatacggaaatttgggattaggtgaccggactgaccgcttagttcctga 661 Score = 77.8 bits (39), Expect = 4e-11 Identities = 72/83 (86%) Strand = Plus / Plus Query: 438 tcccagatttcaggtggatggaggcacacaatggcacttacatcagatggaaaactttat 497 ||||||||||| || || ||||| || ||||||||| | || |||||||||||||| ||| Sbjct: 849 tcccagatttcgggaggttggagacatacaatggcattgacttcagatggaaaactatat 908 Query: 498 ggatggggatggaacaagtttgg 520 |||||||| ||||| |||||||| Sbjct: 909 ggatggggttggaataagtttgg 931
>dbj|AP004506.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT03K03, TM0036a, complete sequence Length = 62624 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 447 tcaggtggatggaggcacacaatggcacttacatcagatggaaaactttatggatgggga 506 |||||||| |||||||| | |||||||| ||||| |||| |||||||||||||||| Sbjct: 41029 tcaggtggttggaggcatagtatggcactcacatcttgtggacaactttatggatggggt 40970 Query: 507 tggaacaagtttgg 520 ||||| ||| |||| Sbjct: 40969 tggaataaggttgg 40956 Score = 48.1 bits (24), Expect = 0.039 Identities = 66/80 (82%) Strand = Plus / Minus Query: 183 tatggatggggctggggtcgatatggaaacttgggtcttggtgatcggaatgaccgattt 242 ||||||||||| ||||| |||||||||||||||| | || ||||| ||||| || | Sbjct: 42137 tatggatggggttggggcagatatggaaacttgggattgggagatcgaaatgatcgctgg 42078 Query: 243 gttcctgaaaaagtatcttc 262 ||||||||||||| ||||| Sbjct: 42077 attcctgaaaaagtttcttc 42058
>gb|AC141112.7| Medicago truncatula clone mth2-15m12, complete sequence Length = 135248 Score = 50.1 bits (25), Expect = 0.010 Identities = 55/65 (84%) Strand = Plus / Plus Query: 447 tcaggtggatggaggcacacaatggcacttacatcagatggaaaactttatggatgggga 506 |||||||| |||||||| || |||||||| ||| | | |||| | |||||||||||||| Sbjct: 35615 tcaggtggttggaggcatactatggcactcacaaccggtggacagctttatggatggggc 35674 Query: 507 tggaa 511 ||||| Sbjct: 35675 tggaa 35679 Score = 50.1 bits (25), Expect = 0.010 Identities = 70/85 (82%) Strand = Plus / Plus Query: 133 ttgctgctggtgccgaacatactgctgcagtaactgaagatggcgatatctatggatggg 192 ||||||||||||| ||||||| || || | |||||| |||| || | || ||||||| Sbjct: 34715 ttgctgctggtgctgaacatagtgtggccatcactgaaaatggagagctgtacggatggg 34774 Query: 193 gctggggtcgatatggaaacttggg 217 | ||||| ||||||||||||||||| Sbjct: 34775 gttggggacgatatggaaacttggg 34799
>gb|AC183540.2| Pan troglodytes BAC clone CH251-324O24 from chromosome 7, complete sequence Length = 176962 Score = 48.1 bits (24), Expect = 0.039 Identities = 24/24 (100%) Strand = Plus / Plus Query: 577 ctgaggaacagaaagttgcccaag 600 |||||||||||||||||||||||| Sbjct: 35277 ctgaggaacagaaagttgcccaag 35300
>dbj|AK047665.1| Mus musculus adult male corpus striatum cDNA, RIKEN full-length enriched library, clone:C030005P03 product:unclassifiable, full insert sequence Length = 2155 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 633 acagaaaagaaaaatgtgtttgc 655 ||||||||||||||||||||||| Sbjct: 1582 acagaaaagaaaaatgtgtttgc 1560
>emb|BX547929.3| Mouse DNA sequence from clone RP24-186K6 on chromosome X, complete sequence Length = 26235 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 633 acagaaaagaaaaatgtgtttgc 655 ||||||||||||||||||||||| Sbjct: 6160 acagaaaagaaaaatgtgtttgc 6138
>gb|BC098215.1| Mus musculus elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 2, mRNA (cDNA clone MGC:106664 IMAGE:30617894), complete cds Length = 3727 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 634 cagaaaagaaaaatgtgtttgc 655 |||||||||||||||||||||| Sbjct: 1634 cagaaaagaaaaatgtgtttgc 1655
>gb|AC158538.2| Mus musculus BAC clone RP23-2H11 from chromosome 13, complete sequence Length = 237313 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 634 cagaaaagaaaaatgtgtttgc 655 |||||||||||||||||||||| Sbjct: 46217 cagaaaagaaaaatgtgtttgc 46238
>dbj|AK044770.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library, clone:A930041F19 product:elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 2, full insert sequence Length = 3720 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 634 cagaaaagaaaaatgtgtttgc 655 |||||||||||||||||||||| Sbjct: 1651 cagaaaagaaaaatgtgtttgc 1672
>dbj|AK014803.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4921503C17 product:elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 2, full insert sequence Length = 3800 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 634 cagaaaagaaaaatgtgtttgc 655 |||||||||||||||||||||| Sbjct: 1730 cagaaaagaaaaatgtgtttgc 1751
>dbj|AK029855.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4931413E19 product:elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 2, full insert sequence Length = 3700 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 634 cagaaaagaaaaatgtgtttgc 655 |||||||||||||||||||||| Sbjct: 1632 cagaaaagaaaaatgtgtttgc 1653
>ref|NM_019423.1| Mus musculus elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 2 (Elovl2), mRNA Length = 3708 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 634 cagaaaagaaaaatgtgtttgc 655 |||||||||||||||||||||| Sbjct: 1641 cagaaaagaaaaatgtgtttgc 1662
>gb|AF170908.1|AF170908 Mus musculus SSC2 (Ssc2) mRNA, complete cds Length = 3708 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 634 cagaaaagaaaaatgtgtttgc 655 |||||||||||||||||||||| Sbjct: 1641 cagaaaagaaaaatgtgtttgc 1662
>dbj|AP003481.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-11E12, complete sequence Length = 138317 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 628 ctttcacagaaaagaaaaatgt 649 |||||||||||||||||||||| Sbjct: 137833 ctttcacagaaaagaaaaatgt 137812
>dbj|AP003462.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-480C22, complete sequences Length = 190032 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 628 ctttcacagaaaagaaaaatgt 649 |||||||||||||||||||||| Sbjct: 37448 ctttcacagaaaagaaaaatgt 37427
>gb|AC116671.14| Mus musculus chromosome 3, clone RP23-111L16, complete sequence Length = 207768 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 570 aattttcctgaggaacagaaa 590 ||||||||||||||||||||| Sbjct: 119601 aattttcctgaggaacagaaa 119621
>gb|AC109596.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1593_C11, complete sequence Length = 112065 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 443 gatttcaggtggatggaggcacaca 467 |||||||||||||||||| |||||| Sbjct: 44416 gatttcaggtggatggagtcacaca 44440
>ref|NM_172920.2| Mus musculus dpy-19-like 1 (C. elegans) (Dpy19l1), mRNA Length = 4473 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 431 ctctacatcccagatttcagg 451 ||||||||||||||||||||| Sbjct: 2136 ctctacatcccagatttcagg 2116
>gb|AC102554.7| Mus musculus chromosome 9, clone RP23-159E10, complete sequence Length = 197397 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 431 ctctacatcccagatttcagg 451 ||||||||||||||||||||| Sbjct: 132458 ctctacatcccagatttcagg 132438
>gb|AC102806.18| Mus musculus chromosome 3, clone RP23-341B15, complete sequence Length = 229984 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 635 agaaaagaaaaatgtgtttgc 655 ||||||||||||||||||||| Sbjct: 11149 agaaaagaaaaatgtgtttgc 11169
>gb|AC158932.5| Mus musculus chromosome 3, clone RP24-338G13, complete sequence Length = 159429 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 635 agaaaagaaaaatgtgtttgc 655 ||||||||||||||||||||| Sbjct: 156607 agaaaagaaaaatgtgtttgc 156627
>emb|CT010514.9| Mouse DNA sequence from clone RP23-192H2 on chromosome 9, complete sequence Length = 216181 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 431 ctctacatcccagatttcagg 451 ||||||||||||||||||||| Sbjct: 61192 ctctacatcccagatttcagg 61172
>gb|AC163625.5| Mus musculus BAC clone RP23-135K11 from chromosome 8, complete sequence Length = 228750 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 637 aaaagaaaaatgtgtttgcat 657 ||||||||||||||||||||| Sbjct: 79714 aaaagaaaaatgtgtttgcat 79734
>gb|BC031382.1| Mus musculus dpy-19-like 1 (C. elegans), mRNA (cDNA clone IMAGE:5012181) Length = 2694 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 431 ctctacatcccagatttcagg 451 ||||||||||||||||||||| Sbjct: 1309 ctctacatcccagatttcagg 1289
>gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome Length = 3059876 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 158 tgcagtaactgaagatggcga 178 ||||||||||||||||||||| Sbjct: 2704040 tgcagtaactgaagatggcga 2704060
>gb|AC110027.5| Homo sapiens chromosome 15, clone RP11-452K20, complete sequence Length = 177770 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 633 acagaaaagaaaaatgtgttt 653 ||||||||||||||||||||| Sbjct: 77251 acagaaaagaaaaatgtgttt 77231
>dbj|AK143845.1| Mus musculus 6 days neonate spleen cDNA, RIKEN full-length enriched library, clone:F430204K01 product:hypothetical protein, full insert sequence Length = 4473 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 431 ctctacatcccagatttcagg 451 ||||||||||||||||||||| Sbjct: 2136 ctctacatcccagatttcagg 2116
>gb|AC161171.5| Mus musculus chromosome 3, clone RP24-326F21, complete sequence Length = 153637 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 570 aattttcctgaggaacagaaa 590 ||||||||||||||||||||| Sbjct: 132401 aattttcctgaggaacagaaa 132381
>dbj|AK031291.1| Mus musculus 13 days embryo male testis cDNA, RIKEN full-length enriched library, clone:6030402K12 product:hypothetical protein, full insert sequence Length = 3548 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 431 ctctacatcccagatttcagg 451 ||||||||||||||||||||| Sbjct: 1211 ctctacatcccagatttcagg 1191
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 443 gatttcaggtggatggaggcacaca 467 |||||||||||||||||| |||||| Sbjct: 25941288 gatttcaggtggatggagtcacaca 25941312
>gb|AC007380.3| Homo sapiens BAC clone RP11-150O13 from 2, complete sequence Length = 207362 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 454 gatggaggcacacaatggcacttac 478 ||||||||||||||||| ||||||| Sbjct: 113942 gatggaggcacacaatgccacttac 113918
>gb|AC080032.12| Homo sapiens chromosome 15, clone RP11-349O9, complete sequence Length = 181413 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 633 acagaaaagaaaaatgtgttt 653 ||||||||||||||||||||| Sbjct: 174312 acagaaaagaaaaatgtgttt 174332
>emb|AL954390.19| Mouse DNA sequence from clone RP23-13H18 on chromosome 4, complete sequence Length = 185237 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 628 ctttcacagaaaagaaaaatg 648 ||||||||||||||||||||| Sbjct: 115829 ctttcacagaaaagaaaaatg 115849
>emb|AL928707.5| Zebrafish DNA sequence from clone CH211-207M2 in linkage group 21, complete sequence Length = 206304 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 625 ttgctttcacagaaaagaaaa 645 ||||||||||||||||||||| Sbjct: 26464 ttgctttcacagaaaagaaaa 26484
>gb|AC163442.16| Mus musculus chromosome 8, clone RP23-441L19, complete sequence Length = 214994 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 609 ggatggaggcacactcttgct 629 ||||||||||||||||||||| Sbjct: 175582 ggatggaggcacactcttgct 175602
>ref|NM_114494.1| Arabidopsis thaliana unknown protein AT3G46260 mRNA, complete cds Length = 1305 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 gatatctatggatggggctg 196 |||||||||||||||||||| Sbjct: 720 gatatctatggatggggctg 701
>gb|AC138204.7| Mus musculus chromosome 3, clone RP23-381G8, complete sequence Length = 173792 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 630 ttcacagaaaagaaaaatgt 649 |||||||||||||||||||| Sbjct: 87731 ttcacagaaaagaaaaatgt 87712
>gb|AE017344.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 4, complete sequence Length = 1783081 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 629 tttcacagaaaagaaaaatg 648 |||||||||||||||||||| Sbjct: 6386 tttcacagaaaagaaaaatg 6405
>gb|AC123735.6| Mus musculus chromosome 15, clone RP23-478A10, complete sequence Length = 171298 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 630 ttcacagaaaagaaaaatgt 649 |||||||||||||||||||| Sbjct: 144945 ttcacagaaaagaaaaatgt 144964
>ref|XM_607409.2| PREDICTED: Bos taurus similar to pecanex-like 2 isoform 1 (LOC528971), mRNA Length = 5493 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 499 gatggggatggaacaagtttgggc 522 ||||||||||||| |||||||||| Sbjct: 5318 gatggggatggaagaagtttgggc 5341
>gb|AC026478.5| Mus musculus strain C57BL6/J chromosome 5 clone RP23-135F23, complete sequence Length = 188103 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 555 tccccagcccaggttaattttcct 578 ||||||||||||||||| |||||| Sbjct: 39714 tccccagcccaggttaaatttcct 39691
>gb|AC123640.9| Mus musculus chromosome 15, clone RP23-11D17, complete sequence Length = 219106 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 630 ttcacagaaaagaaaaatgt 649 |||||||||||||||||||| Sbjct: 148624 ttcacagaaaagaaaaatgt 148605
>gb|AC122379.4| Mus musculus BAC clone RP23-476A7 from chromosome 13, complete sequence Length = 171737 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 555 tccccagcccaggttaattttcct 578 ||||||||||||||||| |||||| Sbjct: 38039 tccccagcccaggttaaatttcct 38062
>gb|AC124456.5| Mus musculus BAC clone RP24-134C11 from chromosome 9, complete sequence Length = 148114 Score = 40.1 bits (20), Expect = 9.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 406 ataaagtagaagccttaaaggatagctc 433 |||||||||||||||||| ||| ||||| Sbjct: 133418 ataaagtagaagccttaagggacagctc 133445
>gb|AC122928.4| Mus musculus BAC clone RP23-10G8 from 9, complete sequence Length = 205725 Score = 40.1 bits (20), Expect = 9.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 406 ataaagtagaagccttaaaggatagctc 433 |||||||||||||||||| ||| ||||| Sbjct: 201757 ataaagtagaagccttaagggacagctc 201730
>gb|AC107767.7| Mus musculus chromosome 15, clone RP23-148C19, complete sequence Length = 191511 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 611 atggaggcacactcttgctt 630 |||||||||||||||||||| Sbjct: 100245 atggaggcacactcttgctt 100264
>emb|AL392043.21| Human DNA sequence from clone RP11-288G11 on chromosome 10 Contains the 3' end of the INPP5A gene for inositol polyphosphate-5-phosphatase 40kDa, a novel gene, the NKX6-2 gene for NK6 transcription factor related locus 2, a novel gene (DKFZp434A1721), the 3' end of a novel gene and ten CpG islands, complete sequence Length = 208064 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 637 aaaagaaaaatgtgtttgca 656 |||||||||||||||||||| Sbjct: 197520 aaaagaaaaatgtgtttgca 197539
>emb|AL136963.17| Human DNA sequence from clone RP11-300N13 on chromosome 13q12.11-12.3, complete sequence Length = 29388 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 634 cagaaaagaaaaatgtgttt 653 |||||||||||||||||||| Sbjct: 18001 cagaaaagaaaaatgtgttt 18020
>ref|XM_784996.1| PREDICTED: Strongylocentrotus purpuratus similar to alsin (LOC585159), partial mRNA Length = 2574 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 aatatggtcagcttggtcat 377 |||||||||||||||||||| Sbjct: 218 aatatggtcagcttggtcat 237
>gb|AC154487.2| Mus musculus BAC clone RP24-119I4 from chromosome 14, complete sequence Length = 199036 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 631 tcacagaaaagaaaaatgtg 650 |||||||||||||||||||| Sbjct: 45547 tcacagaaaagaaaaatgtg 45566
>emb|AL355775.1|ATF12M12 Arabidopsis thaliana DNA chromosome 3, BAC clone F12M12 Length = 106730 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 gatatctatggatggggctg 196 |||||||||||||||||||| Sbjct: 83952 gatatctatggatggggctg 83971
>gb|AC100183.11| Mus musculus chromosome 3, clone RP23-54L16, complete sequence Length = 231917 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 630 ttcacagaaaagaaaaatgt 649 |||||||||||||||||||| Sbjct: 150564 ttcacagaaaagaaaaatgt 150583
>gb|AC127170.11| Medicago truncatula clone mth2-35d10, complete sequence Length = 114143 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 89 cccacaaacgattcaagcttttga 112 ||||||| |||||||||||||||| Sbjct: 111460 cccacaagcgattcaagcttttga 111483
>gb|AC006058.1| Homo sapiens 3p22-7 PAC RPCI4-555D20 (Roswell Park Cancer Institute Human PAC Library) complete sequence Length = 147146 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 atttgttcctgaaaaagtat 258 |||||||||||||||||||| Sbjct: 107637 atttgttcctgaaaaagtat 107618
>gb|AC018622.10| Homo sapiens chromosome 8, clone RP11-346M13, complete sequence Length = 187574 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 628 ctttcacagaaaagaaaaat 647 |||||||||||||||||||| Sbjct: 77098 ctttcacagaaaagaaaaat 77079
>gb|AC099512.2| Homo sapiens chromosome 5 clone RP11-351K10, complete sequence Length = 161775 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 628 ctttcacagaaaagaaaaat 647 |||||||||||||||||||| Sbjct: 92199 ctttcacagaaaagaaaaat 92180
>gb|AC158919.4| Mus musculus chromosome 15, clone RP23-11O12, complete sequence Length = 193418 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 611 atggaggcacactcttgctt 630 |||||||||||||||||||| Sbjct: 129164 atggaggcacactcttgctt 129183
>emb|CR386505.1| Gallus gallus finished cDNA, clone ChEST334c13 Length = 1211 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 166 ctgaagatggcgatatctatggat 189 |||||| ||||||||||||||||| Sbjct: 887 ctgaaggtggcgatatctatggat 910
>gb|AC115284.4| Homo sapiens chromosome 3 clone RP11-155D18, complete sequence Length = 183870 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 384 tttgaagatcatctagttcc 403 |||||||||||||||||||| Sbjct: 85196 tttgaagatcatctagttcc 85215
>dbj|AB222078.1| Tetrahymena thermophila MYO12 mRNA for myosin 12, complete cds Length = 5778 Score = 40.1 bits (20), Expect = 9.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 484 atggaaaactttatggatggggatggaa 511 |||| ||| ||||||||||||||||||| Sbjct: 3509 atggtaaaatttatggatggggatggaa 3536
>gb|AC097662.5| Homo sapiens BAC clone RP11-563C6 from 2, complete sequence Length = 206624 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 637 aaaagaaaaatgtgtttgca 656 |||||||||||||||||||| Sbjct: 14222 aaaagaaaaatgtgtttgca 14241
>gb|AC154610.3| Mus musculus BAC clone RP23-335A11 from chromosome 13, complete sequence Length = 201893 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 gcttttgagggtatttctgt 124 |||||||||||||||||||| Sbjct: 32688 gcttttgagggtatttctgt 32707
>gb|AC124744.3| Mus musculus BAC clone RP23-223E16 from 13, complete sequence Length = 199767 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 555 tccccagcccaggttaattttcct 578 ||||||||||||||||| |||||| Sbjct: 1705 tccccagcccaggttaaatttcct 1682
>gb|AC157952.2| Gallus gallus BAC clone CH261-57A7 from chromosome unknown, complete sequence Length = 216788 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 ttgaagatcatctagttcca 404 |||||||||||||||||||| Sbjct: 82644 ttgaagatcatctagttcca 82663
>gb|AC157664.2| Gallus gallus BAC clone CH261-174B17 from chromosome unknown, complete sequence Length = 214968 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 385 ttgaagatcatctagttcca 404 |||||||||||||||||||| Sbjct: 78591 ttgaagatcatctagttcca 78572
>emb|AL627103.13| Mouse DNA sequence from clone RP23-414M10 on chromosome 4, complete sequence Length = 194995 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 595 cccaagttgcttgtggatgg 614 |||||||||||||||||||| Sbjct: 119486 cccaagttgcttgtggatgg 119467 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,158,315 Number of Sequences: 3902068 Number of extensions: 7158315 Number of successful extensions: 144746 Number of sequences better than 10.0: 84 Number of HSP's better than 10.0 without gapping: 84 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 144325 Number of HSP's gapped (non-prelim): 411 length of query: 691 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 668 effective length of database: 17,143,297,704 effective search space: 11451722866272 effective search space used: 11451722866272 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
