>PROB_BURPS (Q63QM1) Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase)|
           (GK)
          Length = 372

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 22/64 (34%), Positives = 30/64 (46%)
 Frame = -1

Query: 308 DADG*PYGAAGRGVEDVGGAVGPLHVVGRVAGELAADEVQVTXAGPVVVEVDELQAAAAL 129
           D  G  + A GR    +    G    V  V+    A+ +Q         E+DELQAAAA+
Sbjct: 23  DGRGLDHDAIGRWAAQIAALRGAGKEVVLVSSGAIAEGMQRLGWSKRPREIDELQAAAAV 82

Query: 128 GQVG 117
           GQ+G
Sbjct: 83  GQMG 86

>PROB_BURP1 (Q3JNG1) Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase)|
           (GK)
          Length = 372

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 22/64 (34%), Positives = 30/64 (46%)
 Frame = -1

Query: 308 DADG*PYGAAGRGVEDVGGAVGPLHVVGRVAGELAADEVQVTXAGPVVVEVDELQAAAAL 129
           D  G  + A GR    +    G    V  V+    A+ +Q         E+DELQAAAA+
Sbjct: 23  DGRGLDHDAIGRWAAQIAALRGAGKEVVLVSSGAIAEGMQRLGWSKRPREIDELQAAAAV 82

Query: 128 GQVG 117
           GQ+G
Sbjct: 83  GQMG 86

>PROB_BURMA (Q62GV5) Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase)|
           (GK)
          Length = 372

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 22/64 (34%), Positives = 30/64 (46%)
 Frame = -1

Query: 308 DADG*PYGAAGRGVEDVGGAVGPLHVVGRVAGELAADEVQVTXAGPVVVEVDELQAAAAL 129
           D  G  + A GR    +    G    V  V+    A+ +Q         E+DELQAAAA+
Sbjct: 23  DGRGLDHDAIGRWAAQIAALRGAGKEVVLVSSGAIAEGMQRLGWSKRPREIDELQAAAAV 82

Query: 128 GQVG 117
           GQ+G
Sbjct: 83  GQMG 86

>PROB_BURS3 (Q39JU6) Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase)|
           (GK)
          Length = 372

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 21/64 (32%), Positives = 29/64 (45%)
 Frame = -1

Query: 308 DADG*PYGAAGRGVEDVGGAVGPLHVVGRVAGELAADEVQVTXAGPVVVEVDELQAAAAL 129
           D  G  + A GR    +         V  V+    A+ +Q         E+DELQAAAA+
Sbjct: 23  DGKGLDHAAIGRWAAQIAALRAQGKEVVLVSSGAIAEGMQRLGWSKRPREIDELQAAAAV 82

Query: 128 GQVG 117
           GQ+G
Sbjct: 83  GQMG 86

>LDLR_RAT (P35952) Low-density lipoprotein receptor precursor (LDL receptor)|
          Length = 879

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 17/52 (32%), Positives = 23/52 (44%)
 Frame = +3

Query: 186 NLNLIRSQLSGDPTYDVEWTNGTSYIFDSASCRTIRLPVGVLPPDWLHGAVY 341
           N  +  S LS    Y      GTS  +D+     +  P G L  DW+HG +Y
Sbjct: 439 NNRIYWSDLSQRKIYSAVMDQGTSLSYDAIISGDLHAPDG-LAVDWIHGNIY 489

>Y169_METJA (Q57633) Hypothetical ATP-binding protein MJ0169|
          Length = 263

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
 Frame = -1

Query: 239 LHVVGRVAGELAADEVQVTXAGPVVVEV--DELQAAAAL 129
           L+ VGR  GE+  DE+++   G V+VEV  DE   +AAL
Sbjct: 170 LNRVGRDFGEMGRDEIEMLIKGKVLVEVPEDENVRSAAL 208

>METE_VIBPA (Q87NA1) 5-methyltetrahydropteroyltriglutamate--homocysteine|
           methyltransferase (EC 2.1.1.14) (Methionine synthase,
           vitamin-B12 independent isozyme) (Cobalamin-independent
           methionine synthase)
          Length = 760

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 19/62 (30%), Positives = 29/62 (46%)
 Frame = +3

Query: 186 NLNLIRSQLSGDPTYDVEWTNGTSYIFDSASCRTIRLPVGVLPPDWLHGAVYLGRETTDG 365
           N + I  + S D T++V W      I ++        PV + P  +L    YLG+E  +G
Sbjct: 123 NYHYIVPEFSKDDTFEVSWPQLFEEINEAVQAGHKVKPVLLGPVSYL----YLGKEVEEG 178

Query: 366 FD 371
           FD
Sbjct: 179 FD 180

>TRXR2_HUMAN (Q9NNW7) Thioredoxin reductase 2, mitochondrial precursor (EC|
           1.8.1.9) (TR3) (TR-beta) (Selenoprotein Z) (SelZ)
          Length = 524

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 17/47 (36%), Positives = 22/47 (46%)
 Frame = +3

Query: 243 TNGTSYIFDSASCRTIRLPVGVLPPDWLHGAVYLGRETTDGFDCHLW 383
           ++GT ++   A  R  RLP G L   W       G+E T  FD  LW
Sbjct: 270 SHGTRFLRGCAPSRVRRLPDGQLQVTWEDSTT--GKEDTGTFDTVLW 314

>LAMB_ECOLI (P02943) Maltoporin precursor (Maltose-inducible porin) (Lambda|
           receptor protein)
          Length = 446

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 5/42 (11%)
 Frame = -2

Query: 403 QTKSTLVQRWQSKPSVVSRPR*T-----APWSQSGGRTPTGN 293
           Q K TL Q+WQ+  S+ SRP        A W +  G   TGN
Sbjct: 367 QYKITLAQQWQAGDSIWSRPAIRVFATYAKWDEKWGYDYTGN 408

>SFRIP_HUMAN (Q99590) SFRS2-interacting protein (Splicing factor,|
           arginine/serine-rich 2-interacting protein)
           (SC35-interacting protein 1) (CTD-associated SR protein
           11) (Splicing regulatory protein 129) (SRrp129)
           (NY-REN-40 antigen)
          Length = 1148

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 7/70 (10%)
 Frame = -2

Query: 442 QRTGRWVRTSS*YQTKSTLVQRWQSKPSVVSR-------PR*TAPWSQSGGRTPTGNRMV 284
           +RT +W R+ S   ++S    R +SK S   R       PR    W+  G R P GN   
Sbjct: 612 RRTRKWSRSRS--HSRSPSRCRTKSKSSSFGRIDRDSYSPRWKGRWANDGWRCPRGNDRY 669

Query: 283 RQDAESKM*E 254
           R++   K  E
Sbjct: 670 RKNDPEKQNE 679


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,374,810
Number of Sequences: 219361
Number of extensions: 897420
Number of successful extensions: 2640
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2595
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2640
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3638905326
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)