ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal37c04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_476949.1| Oryza sativa (japonica cultivar-group), mRNA 517 e-143
2dbj|AK099833.1| Oryza sativa (japonica cultivar-group) cDNA clon... 509 e-141
3dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 460 e-126
4dbj|AP005179.4| Oryza sativa (japonica cultivar-group) genomic D... 460 e-126
5dbj|AP005877.3| Oryza sativa (japonica cultivar-group) genomic D... 460 e-126
6gb|AY105419.1| Zea mays PCO110580 mRNA sequence 438 e-120
7ref|XM_476950.1| Oryza sativa (japonica cultivar-group), mRNA 381 e-102
8dbj|AK071758.1| Oryza sativa (japonica cultivar-group) cDNA clon... 381 e-102
9ref|XM_470414.1| Oryza sativa (japonica cultivar-group), mRNA 80 8e-12
10gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 80 8e-12
11dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 80 8e-12
12gb|AC096688.4| Oryza sativa chromosome 3 BAC OSJNBa0015N08 genom... 80 8e-12
13dbj|AK101366.1| Oryza sativa (japonica cultivar-group) cDNA clon... 80 8e-12
14dbj|AP004315.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.007
15dbj|AK068238.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.007
16ref|XM_479662.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.11
17dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.11
18dbj|AP004654.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.11
19dbj|AK120363.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.11
20emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 46 0.11
21ref|NM_113280.2| Arabidopsis thaliana unknown protein AT3G23760 ... 44 0.44
22gb|BT008631.1| Arabidopsis thaliana clone RAFL17-06-O10 (R50345)... 44 0.44
23gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 44 0.44
24emb|BX825796.1|CNS0A7QH Arabidopsis thaliana Full-length cDNA Co... 44 0.44
25gb|AY088284.1| Arabidopsis thaliana clone 5176 mRNA, complete se... 44 0.44
26gb|AE005111.1| Halobacterium sp. NRC-1 section 142 of 170 of the... 44 0.44
27dbj|AP000377.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 44 0.44
28ref|XM_515469.1| PREDICTED: Pan troglodytes LOC459225 (LOC459225... 42 1.7
29ref|NM_004801.2| Homo sapiens neurexin 1 (NRXN1), transcript var... 42 1.7
30gb|BC079893.1| Mus musculus neurexin I, mRNA (cDNA clone IMAGE:3... 42 1.7
31gb|BC046631.1| Homo sapiens neurexin 1, mRNA (cDNA clone IMAGE:4... 42 1.7
32ref|XM_847010.1| PREDICTED: Canis familiaris similar to neurexin... 42 1.7
33ref|XM_859895.1| PREDICTED: Canis familiaris similar to neurexin... 42 1.7
34ref|XM_531818.2| PREDICTED: Canis familiaris similar to neurexin... 42 1.7
35dbj|AK124726.1| Homo sapiens cDNA FLJ42736 fis, clone BRAWH20158... 42 1.7
36gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome 42 1.7
37dbj|AK137407.1| Mus musculus 16 days neonate cerebellum cDNA, RI... 42 1.7
38dbj|AK133271.1| Mus musculus adult male testis cDNA, RIKEN full-... 42 1.7
39dbj|AK139280.1| Mus musculus 7 days neonate cerebellum cDNA, RIK... 42 1.7
40dbj|AK163484.1| Mus musculus adult male corpora quadrigemina cDN... 42 1.7
41gb|AF424835.1|AF424835 Macaca mulatta neurexin 1 alpha mRNA, par... 42 1.7
42dbj|AK037724.1| Mus musculus 16 days neonate thymus cDNA, RIKEN ... 42 1.7
43gb|AC007682.3| Homo sapiens BAC clone RP11-391D19 from 2, comple... 42 1.7
44dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 42 1.7
45dbj|AB093249.2| Mus musculus mRNA for mKIAA0578 protein 42 1.7
46emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome 42 1.7
47gb|AE001825.1| Deinococcus radiodurans R1 chromosome 2, complete... 42 1.7
48gb|AC151286.4| Mus musculus BAC clone RP23-368B8 from chromosome... 42 1.7
49gb|AC165087.4| Mus musculus BAC clone RP23-198K7 from chromosome... 42 1.7
50dbj|AB035356.1| Homo sapiens mRNA for neurexin I-alpha protein, ... 42 1.7
51dbj|AB011150.2| Homo sapiens mRNA for KIAA0578 protein, partial cds 42 1.7
52gb|AY751744.1| Danio rerio nicastrin (ncstn) mRNA, complete cds 40 6.8
53gb|CP000081.1| Leishmania major chromosome 35, complete sequence 40 6.8
54gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 40 6.8
55ref|XM_877370.1| PREDICTED: Bos taurus similar to RAB3A interact... 40 6.8
56ref|XM_877322.1| PREDICTED: Bos taurus similar to RAB3A interact... 40 6.8
57ref|XM_865886.1| PREDICTED: Bos taurus similar to RAB3A interact... 40 6.8
58gb|BC105507.1| Bos taurus RAB3A interacting protein (rabin3)-lik... 40 6.8
59ref|XM_453056.1| Kluyveromyces lactis NRRL Y-1140, KLLA0C19184g ... 40 6.8
60ref|XM_838083.1| Leishmania major strain Friedlin hypothetical p... 40 6.8
61emb|AL162390.9| Human DNA sequence from clone RP11-386J22 on chr... 40 6.8
62gb|DQ115865.1| Cyanobacteria phage AS-1 contig_58 genomic sequence 40 6.8
63emb|CR382123.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 40 6.8
64emb|BX572597.1| Rhodopseudomonas palustris CGA009 complete genom... 40 6.8
65gb|AC025905.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.8
66emb|AJ748744.1| Haloferax volcanii hjc gene for holliday junctio... 40 6.8
67gb|AF323606.1|AF323606 Rhodococcus erythropolis picric acid degr... 40 6.8
68dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
69ref|NM_001009556.1| Danio rerio nicastrin (ncstn), mRNA 40 6.8
70dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome 40 6.8
71dbj|AB006206.3| Streptomyces griseus AmfR, AmfA, AmfB, AmfS and ... 40 6.8
72gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.8 
>ref|XM_476949.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 869

 Score =  517 bits (261), Expect = e-143
 Identities = 384/425 (90%), Gaps = 3/425 (0%)
 Strand = Plus / Plus

                                                                       
Query: 69  cccccgaccccgacgccgtggccggagcagttccacgcggngatgttcaccaacctgacc 128
           |||||||||||||||||||||||||||||||||||||||| | | ||||||||||| || 
Sbjct: 113 cccccgaccccgacgccgtggccggagcagttccacgcggtggtattcaccaacctcacg 172

                                                                       
Query: 129 gagagcggcggccgcctgcagctcatcgacctctactacgactggccccgcggncgtaac 188
           | |||||||||||| |||||||| ||||||||||| ||||||||||| || || || |||
Sbjct: 173 gggagcggcggccggctgcagctgatcgacctctattacgactggccgcgggggcgcaac 232

                                                                       
Query: 189 ctgaacctcatccgcagccagctctccggcgacccgacctacgacgtggagtggaccaac 248
           || |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| 
Sbjct: 233 ctcaacctcatccgcggccagctctccggcgacccgacctacgacgtcgagtggaccaat 292

                                                                       
Query: 249 ggcacctcctacatcttcgactccgcgtcctgccgcaccatacggttacccgtcggcgtc 308
           |||||||||||| ||||| || || | |||||||||||||  | ||| ||||||||| ||
Sbjct: 293 ggcacctcctacttcttcaacgccacctcctgccgcaccaagctgttccccgtcggcctc 352

                                                                       
Query: 309 ctgcccccggactggct---ccacggcgccgtctacctcggccgcgagaccaccgacggc 365
           |||||||| ||||||||   |  ||||||||||||||||||||||||||||  || ||||
Sbjct: 353 ctgccccccgactggctcgccgccggcgccgtctacctcggccgcgagaccgtcgccggc 412

                                                                       
Query: 366 ttcgactgccacctctggaccaaggtcgatttcgtctggtactacgaggacgtcctcacc 425
           |||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||
Sbjct: 413 ttcgactgccacctctggaccaaggtcgacatcgtctggtactacgaggacgtcgtcacc 472

                                                                       
Query: 426 caccgccccgtccgctggaacttcttcaatgggatgcagcagcatgtgatgagcttcgag 485
           ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 473 caccgccccgttcgctggaacttcttcaatggtatgcagcagcatgtgatgagcttcgag 532

                
Query: 486 gtggg 490
           |||||
Sbjct: 533 gtggg 537
to top
>dbj|AK099833.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106C07, full
           insert sequence
          Length = 869

 Score =  509 bits (257), Expect = e-141
 Identities = 383/425 (90%), Gaps = 3/425 (0%)
 Strand = Plus / Plus

                                                                       
Query: 69  cccccgaccccgacgccgtggccggagcagttccacgcggngatgttcaccaacctgacc 128
           |||||||||||||||||||||||||||||||||||||||| | | ||||||||||| || 
Sbjct: 113 cccccgaccccgacgccgtggccggagcagttccacgcggtggtattcaccaacctcacg 172

                                                                       
Query: 129 gagagcggcggccgcctgcagctcatcgacctctactacgactggccccgcggncgtaac 188
           | |||||||||||| |||||||| ||||||||||| ||||||||||| || || || |||
Sbjct: 173 gggagcggcggccggctgcagctgatcgacctctattacgactggccgcgggggcgcaac 232

                                                                       
Query: 189 ctgaacctcatccgcagccagctctccggcgacccgacctacgacgtggagtggaccaac 248
           || |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| 
Sbjct: 233 ctcaacctcatccgcggccagctctccggcgacccgacctacgacgtcgagtggaccaat 292

                                                                       
Query: 249 ggcacctcctacatcttcgactccgcgtcctgccgcaccatacggttacccgtcggcgtc 308
           |||||||||||| ||||| || || | |||||||||||||  | ||| ||||||||| ||
Sbjct: 293 ggcacctcctacttcttcaacgccacctcctgccgcaccaagctgttccccgtcggcctc 352

                                                                       
Query: 309 ctgcccccggactggct---ccacggcgccgtctacctcggccgcgagaccaccgacggc 365
           |||||||| ||||||||   |  ||||||||||||||||||||||||||||  || ||||
Sbjct: 353 ctgccccccgactggctcgccgccggcgccgtctacctcggccgcgagaccgtcgccggc 412

                                                                       
Query: 366 ttcgactgccacctctggaccaaggtcgatttcgtctggtactacgaggacgtcctcacc 425
           |||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||
Sbjct: 413 ttcgactgccacctctggaccaaggtcgacatcgtctggtactacgaggacgtcgtcacc 472

                                                                       
Query: 426 caccgccccgtccgctggaacttcttcaatgggatgcagcagcatgtgatgagcttcgag 485
           ||||||||| | |||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 473 caccgcccctttcgctggaacttcttcaatggtatgcagcagcatgtgatgagcttcgag 532

                
Query: 486 gtggg 490
           |||||
Sbjct: 533 gtggg 537
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score =  460 bits (232), Expect = e-126
 Identities = 352/392 (89%), Gaps = 3/392 (0%)
 Strand = Plus / Plus

                                                                           
Query: 69      cccccgaccccgacgccgtggccggagcagttccacgcggngatgttcaccaacctgacc 128
               |||||||||||||||||||||||||||||||||||||||| | | ||||||||||| || 
Sbjct: 4805322 cccccgaccccgacgccgtggccggagcagttccacgcggtggtattcaccaacctcacg 4805381

                                                                           
Query: 129     gagagcggcggccgcctgcagctcatcgacctctactacgactggccccgcggncgtaac 188
               | |||||||||||| |||||||| ||||||||||| ||||||||||| || || || |||
Sbjct: 4805382 gggagcggcggccggctgcagctgatcgacctctattacgactggccgcgggggcgcaac 4805441

                                                                           
Query: 189     ctgaacctcatccgcagccagctctccggcgacccgacctacgacgtggagtggaccaac 248
               || |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| 
Sbjct: 4805442 ctcaacctcatccgcggccagctctccggcgacccgacctacgacgtcgagtggaccaat 4805501

                                                                           
Query: 249     ggcacctcctacatcttcgactccgcgtcctgccgcaccatacggttacccgtcggcgtc 308
               |||||||||||| ||||| || || | |||||||||||||  | ||| ||||||||| ||
Sbjct: 4805502 ggcacctcctacttcttcaacgccacctcctgccgcaccaagctgttccccgtcggcctc 4805561

                                                                           
Query: 309     ctgcccccggactggct---ccacggcgccgtctacctcggccgcgagaccaccgacggc 365
               |||||||| ||||||||   |  ||||||||||||||||||||||||||||  || ||||
Sbjct: 4805562 ctgccccccgactggctcgccgccggcgccgtctacctcggccgcgagaccgtcgccggc 4805621

                                                                           
Query: 366     ttcgactgccacctctggaccaaggtcgatttcgtctggtactacgaggacgtcctcacc 425
               |||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||
Sbjct: 4805622 ttcgactgccacctctggaccaaggtcgacatcgtctggtactacgaggacgtcgtcacc 4805681

                                               
Query: 426     caccgccccgtccgctggaacttcttcaatgg 457
               ||||||||||| ||||||||||||||||||||
Sbjct: 4805682 caccgccccgttcgctggaacttcttcaatgg 4805713



 Score =  333 bits (168), Expect = 3e-88
 Identities = 331/384 (86%), Gaps = 9/384 (2%)
 Strand = Plus / Minus

                                                                           
Query: 76      ccccgacgccgtggccggagcagttccacgcggngatgttcaccaacctgaccgaga--- 132
               ||||||||||||||||||||| ||||||||||| | | ||||| ||||||||| |||   
Sbjct: 4808603 ccccgacgccgtggccggagcggttccacgcggtgcttttcacgaacctgacccagacga 4808544

                                                                           
Query: 133     gcggcggccgc---ctgcagctcatcgacctctactacgactggccccgcggncgtaacc 189
               |||||||| |    |||||| | | |||||||||||||||||||||  | || || ||||
Sbjct: 4808543 gcggcggcgggaagctgcagatgaccgacctctactacgactggcctggggggcgcaacc 4808484

                                                                           
Query: 190     tgaacctcatccgcagccagctctccggcgacccgacctacgacgtggagtggaccaacg 249
               | |||||| ||  | ||||||||||||||||||||  ||||||||| |||||||||||||
Sbjct: 4808483 tcaacctcgtcgccggccagctctccggcgacccggtctacgacgtcgagtggaccaacg 4808424

                                                                           
Query: 250     gcacctcctacatcttcgactccgcgtcctgccgcaccatacggttacccgtcggcgtcc 309
               |||||||||||  |||||||||||| |||||||||||| | | ||| ||||||||| |||
Sbjct: 4808423 gcacctcctactacttcgactccgcctcctgccgcaccttgctgttccccgtcggcatcc 4808364

                                                                           
Query: 310     tgcccccggactggct---ccacggcgccgtctacctcggccgcgagaccaccgacggct 366
               ||||||| ||||||||   |  |||||||| |||||||||||||||| ||   |||||||
Sbjct: 4808363 tgccccccgactggctcgccgccggcgccgcctacctcggccgcgaggccgttgacggct 4808304

                                                                           
Query: 367     tcgactgccacctctggaccaaggtcgatttcgtctggtactacgaggacgtcctcaccc 426
               ||||||||||| |||||||||||||||| ||| |||||||||||||||||||| ||||||
Sbjct: 4808303 tcgactgccacgtctggaccaaggtcgacttcatctggtactacgaggacgtcgtcaccc 4808244

                                       
Query: 427     accgccccgtccgctggaacttct 450
               ||||||||||||||||||||||||
Sbjct: 4808243 accgccccgtccgctggaacttct 4808220



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 32/32 (100%)
 Strand = Plus / Plus

                                               
Query: 459     atgcagcagcatgtgatgagcttcgaggtggg 490
               ||||||||||||||||||||||||||||||||
Sbjct: 4806175 atgcagcagcatgtgatgagcttcgaggtggg 4806206



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Minus

                                                  
Query: 456     gggatgcagcagcatgtgatgagcttcgaggtggg 490
               |||||||||||||||||||||||||| ||||||||
Sbjct: 4807614 gggatgcagcagcatgtgatgagctttgaggtggg 4807580



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 88/109 (80%)
 Strand = Plus / Plus

                                                                            
Query: 218      cgacccgacctacgacgtggagtggaccaacggcacctcctacatcttcgactccgcgtc 277
                |||||||  ||||||||| ||||||  |||||||||| ||| |  ||||||||||   ||
Sbjct: 17082840 cgacccgctctacgacgtcgagtgggacaacggcaccaccttctacttcgactcccgctc 17082899

                                                                 
Query: 278      ctgccgcaccatacggttacccgtcggcgtcctgcccccggactggctc 326
                ||||||||||   || || ||||||||||| || | ||||| |||||||
Sbjct: 17082900 ctgccgcaccgagcgcttccccgtcggcgtgctccgcccgggctggctc 17082948



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 429      cgccccgtccgctggaacttc 449
                |||||||||||||||||||||
Sbjct: 17083060 cgccccgtccgctggaacttc 17083080
to top
>dbj|AP005179.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBb0084L07
          Length = 127992

 Score =  460 bits (232), Expect = e-126
 Identities = 352/392 (89%), Gaps = 3/392 (0%)
 Strand = Plus / Plus

                                                                          
Query: 69     cccccgaccccgacgccgtggccggagcagttccacgcggngatgttcaccaacctgacc 128
              |||||||||||||||||||||||||||||||||||||||| | | ||||||||||| || 
Sbjct: 123232 cccccgaccccgacgccgtggccggagcagttccacgcggtggtattcaccaacctcacg 123291

                                                                          
Query: 129    gagagcggcggccgcctgcagctcatcgacctctactacgactggccccgcggncgtaac 188
              | |||||||||||| |||||||| ||||||||||| ||||||||||| || || || |||
Sbjct: 123292 gggagcggcggccggctgcagctgatcgacctctattacgactggccgcgggggcgcaac 123351

                                                                          
Query: 189    ctgaacctcatccgcagccagctctccggcgacccgacctacgacgtggagtggaccaac 248
              || |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| 
Sbjct: 123352 ctcaacctcatccgcggccagctctccggcgacccgacctacgacgtcgagtggaccaat 123411

                                                                          
Query: 249    ggcacctcctacatcttcgactccgcgtcctgccgcaccatacggttacccgtcggcgtc 308
              |||||||||||| ||||| || || | |||||||||||||  | ||| ||||||||| ||
Sbjct: 123412 ggcacctcctacttcttcaacgccacctcctgccgcaccaagctgttccccgtcggcctc 123471

                                                                          
Query: 309    ctgcccccggactggct---ccacggcgccgtctacctcggccgcgagaccaccgacggc 365
              |||||||| ||||||||   |  ||||||||||||||||||||||||||||  || ||||
Sbjct: 123472 ctgccccccgactggctcgccgccggcgccgtctacctcggccgcgagaccgtcgccggc 123531

                                                                          
Query: 366    ttcgactgccacctctggaccaaggtcgatttcgtctggtactacgaggacgtcctcacc 425
              |||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||
Sbjct: 123532 ttcgactgccacctctggaccaaggtcgacatcgtctggtactacgaggacgtcgtcacc 123591

                                              
Query: 426    caccgccccgtccgctggaacttcttcaatgg 457
              ||||||||||| ||||||||||||||||||||
Sbjct: 123592 caccgccccgttcgctggaacttcttcaatgg 123623



 Score =  333 bits (168), Expect = 3e-88
 Identities = 331/384 (86%), Gaps = 9/384 (2%)
 Strand = Plus / Minus

                                                                          
Query: 76     ccccgacgccgtggccggagcagttccacgcggngatgttcaccaacctgaccgaga--- 132
              ||||||||||||||||||||| ||||||||||| | | ||||| ||||||||| |||   
Sbjct: 126513 ccccgacgccgtggccggagcggttccacgcggtgcttttcacgaacctgacccagacga 126454

                                                                          
Query: 133    gcggcggccgc---ctgcagctcatcgacctctactacgactggccccgcggncgtaacc 189
              |||||||| |    |||||| | | |||||||||||||||||||||  | || || ||||
Sbjct: 126453 gcggcggcgggaagctgcagatgaccgacctctactacgactggcctggggggcgcaacc 126394

                                                                          
Query: 190    tgaacctcatccgcagccagctctccggcgacccgacctacgacgtggagtggaccaacg 249
              | |||||| ||  | ||||||||||||||||||||  ||||||||| |||||||||||||
Sbjct: 126393 tcaacctcgtcgccggccagctctccggcgacccggtctacgacgtcgagtggaccaacg 126334

                                                                          
Query: 250    gcacctcctacatcttcgactccgcgtcctgccgcaccatacggttacccgtcggcgtcc 309
              |||||||||||  |||||||||||| |||||||||||| | | ||| ||||||||| |||
Sbjct: 126333 gcacctcctactacttcgactccgcctcctgccgcaccttgctgttccccgtcggcatcc 126274

                                                                          
Query: 310    tgcccccggactggct---ccacggcgccgtctacctcggccgcgagaccaccgacggct 366
              ||||||| ||||||||   |  |||||||| |||||||||||||||| ||   |||||||
Sbjct: 126273 tgccccccgactggctcgccgccggcgccgcctacctcggccgcgaggccgttgacggct 126214

                                                                          
Query: 367    tcgactgccacctctggaccaaggtcgatttcgtctggtactacgaggacgtcctcaccc 426
              ||||||||||| |||||||||||||||| ||| |||||||||||||||||||| ||||||
Sbjct: 126213 tcgactgccacgtctggaccaaggtcgacttcatctggtactacgaggacgtcgtcaccc 126154

                                      
Query: 427    accgccccgtccgctggaacttct 450
              ||||||||||||||||||||||||
Sbjct: 126153 accgccccgtccgctggaacttct 126130



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 32/32 (100%)
 Strand = Plus / Plus

                                              
Query: 459    atgcagcagcatgtgatgagcttcgaggtggg 490
              ||||||||||||||||||||||||||||||||
Sbjct: 124085 atgcagcagcatgtgatgagcttcgaggtggg 124116



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Minus

                                                 
Query: 456    gggatgcagcagcatgtgatgagcttcgaggtggg 490
              |||||||||||||||||||||||||| ||||||||
Sbjct: 125524 gggatgcagcagcatgtgatgagctttgaggtggg 125490
to top
>dbj|AP005877.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0002L09
          Length = 146343

 Score =  460 bits (232), Expect = e-126
 Identities = 352/392 (89%), Gaps = 3/392 (0%)
 Strand = Plus / Plus

                                                                         
Query: 69    cccccgaccccgacgccgtggccggagcagttccacgcggngatgttcaccaacctgacc 128
             |||||||||||||||||||||||||||||||||||||||| | | ||||||||||| || 
Sbjct: 79835 cccccgaccccgacgccgtggccggagcagttccacgcggtggtattcaccaacctcacg 79894

                                                                         
Query: 129   gagagcggcggccgcctgcagctcatcgacctctactacgactggccccgcggncgtaac 188
             | |||||||||||| |||||||| ||||||||||| ||||||||||| || || || |||
Sbjct: 79895 gggagcggcggccggctgcagctgatcgacctctattacgactggccgcgggggcgcaac 79954

                                                                         
Query: 189   ctgaacctcatccgcagccagctctccggcgacccgacctacgacgtggagtggaccaac 248
             || |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| 
Sbjct: 79955 ctcaacctcatccgcggccagctctccggcgacccgacctacgacgtcgagtggaccaat 80014

                                                                         
Query: 249   ggcacctcctacatcttcgactccgcgtcctgccgcaccatacggttacccgtcggcgtc 308
             |||||||||||| ||||| || || | |||||||||||||  | ||| ||||||||| ||
Sbjct: 80015 ggcacctcctacttcttcaacgccacctcctgccgcaccaagctgttccccgtcggcctc 80074

                                                                         
Query: 309   ctgcccccggactggct---ccacggcgccgtctacctcggccgcgagaccaccgacggc 365
             |||||||| ||||||||   |  ||||||||||||||||||||||||||||  || ||||
Sbjct: 80075 ctgccccccgactggctcgccgccggcgccgtctacctcggccgcgagaccgtcgccggc 80134

                                                                         
Query: 366   ttcgactgccacctctggaccaaggtcgatttcgtctggtactacgaggacgtcctcacc 425
             |||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||
Sbjct: 80135 ttcgactgccacctctggaccaaggtcgacatcgtctggtactacgaggacgtcgtcacc 80194

                                             
Query: 426   caccgccccgtccgctggaacttcttcaatgg 457
             ||||||||||| ||||||||||||||||||||
Sbjct: 80195 caccgccccgttcgctggaacttcttcaatgg 80226



 Score =  333 bits (168), Expect = 3e-88
 Identities = 331/384 (86%), Gaps = 9/384 (2%)
 Strand = Plus / Minus

                                                                         
Query: 76    ccccgacgccgtggccggagcagttccacgcggngatgttcaccaacctgaccgaga--- 132
             ||||||||||||||||||||| ||||||||||| | | ||||| ||||||||| |||   
Sbjct: 83116 ccccgacgccgtggccggagcggttccacgcggtgcttttcacgaacctgacccagacga 83057

                                                                         
Query: 133   gcggcggccgc---ctgcagctcatcgacctctactacgactggccccgcggncgtaacc 189
             |||||||| |    |||||| | | |||||||||||||||||||||  | || || ||||
Sbjct: 83056 gcggcggcgggaagctgcagatgaccgacctctactacgactggcctggggggcgcaacc 82997

                                                                         
Query: 190   tgaacctcatccgcagccagctctccggcgacccgacctacgacgtggagtggaccaacg 249
             | |||||| ||  | ||||||||||||||||||||  ||||||||| |||||||||||||
Sbjct: 82996 tcaacctcgtcgccggccagctctccggcgacccggtctacgacgtcgagtggaccaacg 82937

                                                                         
Query: 250   gcacctcctacatcttcgactccgcgtcctgccgcaccatacggttacccgtcggcgtcc 309
             |||||||||||  |||||||||||| |||||||||||| | | ||| ||||||||| |||
Sbjct: 82936 gcacctcctactacttcgactccgcctcctgccgcaccttgctgttccccgtcggcatcc 82877

                                                                         
Query: 310   tgcccccggactggct---ccacggcgccgtctacctcggccgcgagaccaccgacggct 366
             ||||||| ||||||||   |  |||||||| |||||||||||||||| ||   |||||||
Sbjct: 82876 tgccccccgactggctcgccgccggcgccgcctacctcggccgcgaggccgttgacggct 82817

                                                                         
Query: 367   tcgactgccacctctggaccaaggtcgatttcgtctggtactacgaggacgtcctcaccc 426
             ||||||||||| |||||||||||||||| ||| |||||||||||||||||||| ||||||
Sbjct: 82816 tcgactgccacgtctggaccaaggtcgacttcatctggtactacgaggacgtcgtcaccc 82757

                                     
Query: 427   accgccccgtccgctggaacttct 450
             ||||||||||||||||||||||||
Sbjct: 82756 accgccccgtccgctggaacttct 82733



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 32/32 (100%)
 Strand = Plus / Plus

                                             
Query: 459   atgcagcagcatgtgatgagcttcgaggtggg 490
             ||||||||||||||||||||||||||||||||
Sbjct: 80688 atgcagcagcatgtgatgagcttcgaggtggg 80719



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Minus

                                                
Query: 456   gggatgcagcagcatgtgatgagcttcgaggtggg 490
             |||||||||||||||||||||||||| ||||||||
Sbjct: 82127 gggatgcagcagcatgtgatgagctttgaggtggg 82093
to top
>gb|AY105419.1| Zea mays PCO110580 mRNA sequence
          Length = 1045

 Score =  438 bits (221), Expect = e-120
 Identities = 374/425 (88%), Gaps = 3/425 (0%)
 Strand = Plus / Plus

                                                                       
Query: 78  ccgacgccgtggccggagcagttccacgcggngatgttcaccaacctgaccgagagcggc 137
           ||||||||||||||||||||||||||||||| | | |||||||| || ||||||||||||
Sbjct: 192 ccgacgccgtggccggagcagttccacgcggtggtcttcaccaatctcaccgagagcggc 251

                                                                       
Query: 138 ggccgcctgcagctcatcgacctctactacgactggccccgcggncgtaacctgaacctc 197
           ||||| |||||||| |||||||| ||||||||||||||| | || || ||||| ||||||
Sbjct: 252 ggccggctgcagctgatcgacctgtactacgactggcccaggggccgcaacctcaacctc 311

                                                                       
Query: 198 atccgcagccagctctccggcgacccgacctacgacgtggagtggaccaacggcacctcc 257
           |||||   |||||||||| ||||||||  ||||||||| |||||||||||||||||||||
Sbjct: 312 atccgggaccagctctccagcgacccgctctacgacgtcgagtggaccaacggcacctcc 371

                                                                       
Query: 258 tacatcttcgactccgcgtcctgccgcaccatacggttacccgtcggcgtcctgcccccg 317
           ||| |||||||||||| ||||||||||||||| || || ||||| ||  ||||||| || 
Sbjct: 372 tacttcttcgactccgggtcctgccgcaccatgcgtttccccgtggggatcctgccgcct 431

                                                                       
Query: 318 gactggct---ccacggcgccgtctacctcggccgcgagaccaccgacggcttcgactgc 374
           ||||||||   |  |||||||||||| ||||||||||||  |  ||||||||||||||||
Sbjct: 432 gactggctcgccgccggcgccgtctatctcggccgcgagcacgtcgacggcttcgactgc 491

                                                                       
Query: 375 cacctctggaccaaggtcgatttcgtctggtactacgaggacgtcctcacccaccgcccc 434
           ||||| |||||||||||||| |||||||||||||||||||| |||  ||||   ||||||
Sbjct: 492 cacctgtggaccaaggtcgacttcgtctggtactacgaggaagtcgccaccggtcgcccc 551

                                                                       
Query: 435 gtccgctggaacttcttcaatgggatgcagcagcatgtgatgagcttcgaggtgggaggg 494
           ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| 
Sbjct: 552 gtccgctggaatttcttcaatgggatgcagcagcatgtgatgagctttgaggtgggagga 611

                
Query: 495 gtgct 499
           |||||
Sbjct: 612 gtgct 616
to top
>ref|XM_476950.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1279

 Score =  381 bits (192), Expect = e-102
 Identities = 367/424 (86%), Gaps = 9/424 (2%)
 Strand = Plus / Plus

                                                                       
Query: 76  ccccgacgccgtggccggagcagttccacgcggngatgttcaccaacctgaccgaga--- 132
           ||||||||||||||||||||| ||||||||||| | | ||||| ||||||||| |||   
Sbjct: 162 ccccgacgccgtggccggagcggttccacgcggtgcttttcacgaacctgacccagacga 221

                                                                       
Query: 133 gcggcggccgc---ctgcagctcatcgacctctactacgactggccccgcggncgtaacc 189
           |||||||| |    |||||| | | |||||||||||||||||||||  | || || ||||
Sbjct: 222 gcggcggcgggaagctgcagatgaccgacctctactacgactggcctggggggcgcaacc 281

                                                                       
Query: 190 tgaacctcatccgcagccagctctccggcgacccgacctacgacgtggagtggaccaacg 249
           | |||||| ||  | ||||||||||||||||||||  ||||||||| |||||||||||||
Sbjct: 282 tcaacctcgtcgccggccagctctccggcgacccggtctacgacgtcgagtggaccaacg 341

                                                                       
Query: 250 gcacctcctacatcttcgactccgcgtcctgccgcaccatacggttacccgtcggcgtcc 309
           |||||||||||  |||||||||||| |||||||||||| | | ||| ||||||||| |||
Sbjct: 342 gcacctcctactacttcgactccgcctcctgccgcaccttgctgttccccgtcggcatcc 401

                                                                       
Query: 310 tgcccccggactggct---ccacggcgccgtctacctcggccgcgagaccaccgacggct 366
           ||||||| ||||||||   |  |||||||| |||||||||||||||| ||   |||||||
Sbjct: 402 tgccccccgactggctcgccgccggcgccgcctacctcggccgcgaggccgttgacggct 461

                                                                       
Query: 367 tcgactgccacctctggaccaaggtcgatttcgtctggtactacgaggacgtcctcaccc 426
           ||||||||||| |||||||||||||||| ||| |||||||||||||||||||| ||||||
Sbjct: 462 tcgactgccacgtctggaccaaggtcgacttcatctggtactacgaggacgtcgtcaccc 521

                                                                       
Query: 427 accgccccgtccgctggaacttcttcaatgggatgcagcagcatgtgatgagcttcgagg 486
           |||||||||||||||||||||||| ||  |||||||||||||||||||||||||| ||||
Sbjct: 522 accgccccgtccgctggaacttctacaccgggatgcagcagcatgtgatgagctttgagg 581

               
Query: 487 tggg 490
           ||||
Sbjct: 582 tggg 585
to top
>dbj|AK071758.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023112J01, full
           insert sequence
          Length = 1279

 Score =  381 bits (192), Expect = e-102
 Identities = 367/424 (86%), Gaps = 9/424 (2%)
 Strand = Plus / Plus

                                                                       
Query: 76  ccccgacgccgtggccggagcagttccacgcggngatgttcaccaacctgaccgaga--- 132
           ||||||||||||||||||||| ||||||||||| | | ||||| ||||||||| |||   
Sbjct: 162 ccccgacgccgtggccggagcggttccacgcggtgcttttcacgaacctgacccagacga 221

                                                                       
Query: 133 gcggcggccgc---ctgcagctcatcgacctctactacgactggccccgcggncgtaacc 189
           |||||||| |    |||||| | | |||||||||||||||||||||  | || || ||||
Sbjct: 222 gcggcggcgggaagctgcagatgaccgacctctactacgactggcctggggggcgcaacc 281

                                                                       
Query: 190 tgaacctcatccgcagccagctctccggcgacccgacctacgacgtggagtggaccaacg 249
           | |||||| ||  | ||||||||||||||||||||  ||||||||| |||||||||||||
Sbjct: 282 tcaacctcgtcgccggccagctctccggcgacccggtctacgacgtcgagtggaccaacg 341

                                                                       
Query: 250 gcacctcctacatcttcgactccgcgtcctgccgcaccatacggttacccgtcggcgtcc 309
           |||||||||||  |||||||||||| |||||||||||| | | ||| ||||||||| |||
Sbjct: 342 gcacctcctactacttcgactccgcctcctgccgcaccttgctgttccccgtcggcatcc 401

                                                                       
Query: 310 tgcccccggactggct---ccacggcgccgtctacctcggccgcgagaccaccgacggct 366
           ||||||| ||||||||   |  |||||||| |||||||||||||||| ||   |||||||
Sbjct: 402 tgccccccgactggctcgccgccggcgccgcctacctcggccgcgaggccgttgacggct 461

                                                                       
Query: 367 tcgactgccacctctggaccaaggtcgatttcgtctggtactacgaggacgtcctcaccc 426
           ||||||||||| |||||||||||||||| ||| |||||||||||||||||||| ||||||
Sbjct: 462 tcgactgccacgtctggaccaaggtcgacttcatctggtactacgaggacgtcgtcaccc 521

                                                                       
Query: 427 accgccccgtccgctggaacttcttcaatgggatgcagcagcatgtgatgagcttcgagg 486
           |||||||||||||||||||||||| ||  |||||||||||||||||||||||||| ||||
Sbjct: 522 accgccccgtccgctggaacttctacaccgggatgcagcagcatgtgatgagctttgagg 581

               
Query: 487 tggg 490
           ||||
Sbjct: 582 tggg 585
to top
>ref|XM_470414.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 846

 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 88/104 (84%)
 Strand = Plus / Plus

                                                                       
Query: 334 ccgtctacctcggccgcgagaccaccgacggcttcgactgccacctctggaccaaggtcg 393
           ||||||||||||||||| |  || |||||||||||||||||||| ||||| |||||| ||
Sbjct: 344 ccgtctacctcggccgccaccccgccgacggcttcgactgccacgtctgggccaaggccg 403

                                                       
Query: 394 atttcgtctggtactacgaggacgtcctcacccaccgccccgtc 437
           | ||| ||   ||||||||||||  ||||||| | |||||||||
Sbjct: 404 acttcatcacctactacgaggacaccctcaccaaacgccccgtc 447



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 72  ccgaccccgacgccgtggccggagcagttccacgcg 107
           ||||| |||||||| |||||||  ||||||||||||
Sbjct: 79  ccgacgccgacgccatggccggcccagttccacgcg 114
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 88/104 (84%)
 Strand = Plus / Minus

                                                                            
Query: 334      ccgtctacctcggccgcgagaccaccgacggcttcgactgccacctctggaccaaggtcg 393
                ||||||||||||||||| |  || |||||||||||||||||||| ||||| |||||| ||
Sbjct: 35515322 ccgtctacctcggccgccaccccgccgacggcttcgactgccacgtctgggccaaggccg 35515263

                                                            
Query: 394      atttcgtctggtactacgaggacgtcctcacccaccgccccgtc 437
                | ||| ||   ||||||||||||  ||||||| | |||||||||
Sbjct: 35515262 acttcatcacctactacgaggacaccctcaccaaacgccccgtc 35515219



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                    
Query: 72       ccgaccccgacgccgtggccggagcagttccacgcg 107
                ||||| |||||||| |||||||  ||||||||||||
Sbjct: 35515587 ccgacgccgacgccatggccggcccagttccacgcg 35515552
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 88/104 (84%)
 Strand = Plus / Minus

                                                                            
Query: 334      ccgtctacctcggccgcgagaccaccgacggcttcgactgccacctctggaccaaggtcg 393
                ||||||||||||||||| |  || |||||||||||||||||||| ||||| |||||| ||
Sbjct: 35605394 ccgtctacctcggccgccaccccgccgacggcttcgactgccacgtctgggccaaggccg 35605335

                                                            
Query: 394      atttcgtctggtactacgaggacgtcctcacccaccgccccgtc 437
                | ||| ||   ||||||||||||  ||||||| | |||||||||
Sbjct: 35605334 acttcatcacctactacgaggacaccctcaccaaacgccccgtc 35605291



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                    
Query: 72       ccgaccccgacgccgtggccggagcagttccacgcg 107
                ||||| |||||||| |||||||  ||||||||||||
Sbjct: 35605659 ccgacgccgacgccatggccggcccagttccacgcg 35605624
to top
>gb|AC096688.4| Oryza sativa chromosome 3 BAC OSJNBa0015N08 genomic sequence, complete
             sequence
          Length = 145290

 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 88/104 (84%)
 Strand = Plus / Minus

                                                                         
Query: 334   ccgtctacctcggccgcgagaccaccgacggcttcgactgccacctctggaccaaggtcg 393
             ||||||||||||||||| |  || |||||||||||||||||||| ||||| |||||| ||
Sbjct: 48285 ccgtctacctcggccgccaccccgccgacggcttcgactgccacgtctgggccaaggccg 48226

                                                         
Query: 394   atttcgtctggtactacgaggacgtcctcacccaccgccccgtc 437
             | ||| ||   ||||||||||||  ||||||| | |||||||||
Sbjct: 48225 acttcatcacctactacgaggacaccctcaccaaacgccccgtc 48182



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                 
Query: 72    ccgaccccgacgccgtggccggagcagttccacgcg 107
             ||||| |||||||| |||||||  ||||||||||||
Sbjct: 48550 ccgacgccgacgccatggccggcccagttccacgcg 48515
to top
>dbj|AK101366.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033035L04, full
           insert sequence
          Length = 916

 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 88/104 (84%)
 Strand = Plus / Plus

                                                                       
Query: 334 ccgtctacctcggccgcgagaccaccgacggcttcgactgccacctctggaccaaggtcg 393
           ||||||||||||||||| |  || |||||||||||||||||||| ||||| |||||| ||
Sbjct: 356 ccgtctacctcggccgccaccccgccgacggcttcgactgccacgtctgggccaaggccg 415

                                                       
Query: 394 atttcgtctggtactacgaggacgtcctcacccaccgccccgtc 437
           | ||| ||   ||||||||||||  ||||||| | |||||||||
Sbjct: 416 acttcatcacctactacgaggacaccctcaccaaacgccccgtc 459



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 72  ccgaccccgacgccgtggccggagcagttccacgcg 107
           ||||| |||||||| |||||||  ||||||||||||
Sbjct: 91  ccgacgccgacgccatggccggcccagttccacgcg 126
to top
>dbj|AP004315.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0571D04
          Length = 149302

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 88/109 (80%)
 Strand = Plus / Plus

                                                                         
Query: 218   cgacccgacctacgacgtggagtggaccaacggcacctcctacatcttcgactccgcgtc 277
             |||||||  ||||||||| ||||||  |||||||||| ||| |  ||||||||||   ||
Sbjct: 35966 cgacccgctctacgacgtcgagtgggacaacggcaccaccttctacttcgactcccgctc 36025

                                                              
Query: 278   ctgccgcaccatacggttacccgtcggcgtcctgcccccggactggctc 326
             ||||||||||   || || ||||||||||| || | ||||| |||||||
Sbjct: 36026 ctgccgcaccgagcgcttccccgtcggcgtgctccgcccgggctggctc 36074



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 429   cgccccgtccgctggaacttc 449
             |||||||||||||||||||||
Sbjct: 36186 cgccccgtccgctggaacttc 36206
to top
>dbj|AK068238.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149J12, full
           insert sequence
          Length = 863

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 88/109 (80%)
 Strand = Plus / Plus

                                                                       
Query: 218 cgacccgacctacgacgtggagtggaccaacggcacctcctacatcttcgactccgcgtc 277
           |||||||  ||||||||| ||||||  |||||||||| ||| |  ||||||||||   ||
Sbjct: 254 cgacccgctctacgacgtcgagtgggacaacggcaccaccttctacttcgactcccgctc 313

                                                            
Query: 278 ctgccgcaccatacggttacccgtcggcgtcctgcccccggactggctc 326
           ||||||||||   || || ||||||||||| || | ||||| |||||||
Sbjct: 314 ctgccgcaccgagcgcttccccgtcggcgtgctccgcccgggctggctc 362



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 429 cgccccgtccgctggaacttc 449
           |||||||||||||||||||||
Sbjct: 474 cgccccgtccgctggaacttc 494
to top
>ref|XM_479662.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 635

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                      
Query: 133 gcggcggccgcctgcagctcatcgacctctactacgactggcc 175
           ||||||| || |||||||| |||||  ||||||||||||||||
Sbjct: 179 gcggcgggcggctgcagctaatcgagatctactacgactggcc 221
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
              complete sequence
          Length = 28434780

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                         
Query: 133    gcggcggccgcctgcagctcatcgacctctactacgactggcc 175
              ||||||| || |||||||| |||||  ||||||||||||||||
Sbjct: 153030 gcggcgggcggctgcagctaatcgagatctactacgactggcc 153072
to top
>dbj|AP004654.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0015C07
          Length = 149079

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                        
Query: 133   gcggcggccgcctgcagctcatcgacctctactacgactggcc 175
             ||||||| || |||||||| |||||  ||||||||||||||||
Sbjct: 68365 gcggcgggcggctgcagctaatcgagatctactacgactggcc 68407
to top
>dbj|AK120363.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013068G21, full
           insert sequence
          Length = 635

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                      
Query: 133 gcggcggccgcctgcagctcatcgacctctactacgactggcc 175
           ||||||| || |||||||| |||||  ||||||||||||||||
Sbjct: 179 gcggcgggcggctgcagctaatcgagatctactacgactggcc 221
to top
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 348     cgcgagaccaccgacggcttcga 370
               |||||||||||||||||||||||
Sbjct: 2915775 cgcgagaccaccgacggcttcga 2915753
to top
>ref|NM_113280.2| Arabidopsis thaliana unknown protein AT3G23760 mRNA, complete cds
          Length = 751

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 87  tggccggagcagttccacgcggngatgtt 115
           |||||||||||||||||||||  ||||||
Sbjct: 142 tggccggagcagttccacgcgttgatgtt 170
to top
>gb|BT008631.1| Arabidopsis thaliana clone RAFL17-06-O10 (R50345) At3g23760 mRNA,
           partial sequence
          Length = 732

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 87  tggccggagcagttccacgcggngatgtt 115
           |||||||||||||||||||||  ||||||
Sbjct: 109 tggccggagcagttccacgcgttgatgtt 137
to top
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 347     ccgcgagaccaccgacggcttc 368
               ||||||||||||||||||||||
Sbjct: 2837844 ccgcgagaccaccgacggcttc 2837823
to top
>emb|BX825796.1|CNS0A7QH Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL62ZH08 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 726

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 87  tggccggagcagttccacgcggngatgtt 115
           |||||||||||||||||||||  ||||||
Sbjct: 132 tggccggagcagttccacgcgttgatgtt 160
to top
>gb|AY088284.1| Arabidopsis thaliana clone 5176 mRNA, complete sequence
          Length = 751

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 87  tggccggagcagttccacgcggngatgtt 115
           |||||||||||||||||||||  ||||||
Sbjct: 142 tggccggagcagttccacgcgttgatgtt 170
to top
>gb|AE005111.1| Halobacterium sp. NRC-1 section 142 of 170 of the complete genome
          Length = 11925

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 419   cctcacccaccgccccgtccgc 440
             ||||||||||||||||||||||
Sbjct: 11812 cctcacccaccgccccgtccgc 11791
to top
>dbj|AP000377.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MYM9
          Length = 71178

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 87    tggccggagcagttccacgcggngatgtt 115
             |||||||||||||||||||||  ||||||
Sbjct: 38551 tggccggagcagttccacgcgttgatgtt 38523
to top
>ref|XM_515469.1| PREDICTED: Pan troglodytes LOC459225 (LOC459225), mRNA
          Length = 986

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 133 gcggcggccgcctgcagctca 153
           |||||||||||||||||||||
Sbjct: 254 gcggcggccgcctgcagctca 274
to top
>ref|NM_004801.2| Homo sapiens neurexin 1 (NRXN1), transcript variant alpha, mRNA
          Length = 6202

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 133 gcggcggccgcctgcagctca 153
           |||||||||||||||||||||
Sbjct: 446 gcggcggccgcctgcagctca 466
to top
>gb|BC079893.1| Mus musculus neurexin I, mRNA (cDNA clone IMAGE:30544573)
          Length = 5697

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 133  gcggcggccgcctgcagctca 153
            |||||||||||||||||||||
Sbjct: 1268 gcggcggccgcctgcagctca 1288
to top
>gb|BC046631.1| Homo sapiens neurexin 1, mRNA (cDNA clone IMAGE:4815048), complete
            cds
          Length = 5169

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 133  gcggcggccgcctgcagctca 153
            |||||||||||||||||||||
Sbjct: 1317 gcggcggccgcctgcagctca 1337
to top
>ref|XM_847010.1| PREDICTED: Canis familiaris similar to neurexin 1 isoform alpha
           precursor, transcript variant 2 (LOC474589), mRNA
          Length = 5663

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 133 gcggcggccgcctgcagctca 153
           |||||||||||||||||||||
Sbjct: 254 gcggcggccgcctgcagctca 274
to top
>ref|XM_859895.1| PREDICTED: Canis familiaris similar to neurexin 1 isoform alpha
           precursor, transcript variant 5 (LOC474589), mRNA
          Length = 5615

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 133 gcggcggccgcctgcagctca 153
           |||||||||||||||||||||
Sbjct: 254 gcggcggccgcctgcagctca 274
to top
>ref|XM_531818.2| PREDICTED: Canis familiaris similar to neurexin 1 isoform alpha
           precursor, transcript variant 1 (LOC474589), mRNA
          Length = 5504

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 133 gcggcggccgcctgcagctca 153
           |||||||||||||||||||||
Sbjct: 254 gcggcggccgcctgcagctca 274
to top
>dbj|AK124726.1| Homo sapiens cDNA FLJ42736 fis, clone BRAWH2015866, highly  similar
            to Homo sapiens mRNA for neurexin I-alpha protein
          Length = 2543

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 133  gcggcggccgcctgcagctca 153
            |||||||||||||||||||||
Sbjct: 1731 gcggcggccgcctgcagctca 1751
to top
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 419     cctcacccaccgccccgtccgctgg 443
               ||||||||||||||||| |||||||
Sbjct: 3784258 cctcacccaccgccccgcccgctgg 3784282



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                               
Query: 123     ctgaccgagagcggcggccgcctgcagctcat 154
               ||||||||  |||||||| |||||||||||||
Sbjct: 1364451 ctgaccgacggcggcggcggcctgcagctcat 1364420
to top
>dbj|AK137407.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length
            enriched library, clone:9630047F03 product:neurexin I,
            full insert sequence
          Length = 4821

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 133  gcggcggccgcctgcagctca 153
            |||||||||||||||||||||
Sbjct: 1344 gcggcggccgcctgcagctca 1364
to top
>dbj|AK133271.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:4932428E23 product:neurexin I, full
           insert sequence
          Length = 3308

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 133 gcggcggccgcctgcagctca 153
           |||||||||||||||||||||
Sbjct: 12  gcggcggccgcctgcagctca 32
to top
>dbj|AK139280.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length
            enriched library, clone:A730090O12 product:Neurexin
            1-alpha precursor (Neurexin I-alpha) homolog [Rattus
            norvegicus], full insert sequence
          Length = 4300

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 133  gcggcggccgcctgcagctca 153
            |||||||||||||||||||||
Sbjct: 1285 gcggcggccgcctgcagctca 1305
to top
>dbj|AK163484.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length
            enriched library, clone:B230220E16 product:neurexin I,
            full insert sequence
          Length = 3102

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 133  gcggcggccgcctgcagctca 153
            |||||||||||||||||||||
Sbjct: 1307 gcggcggccgcctgcagctca 1327
to top
>gb|AF424835.1|AF424835 Macaca mulatta neurexin 1 alpha mRNA, partial cds
          Length = 448

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 133 gcggcggccgcctgcagctca 153
           |||||||||||||||||||||
Sbjct: 68  gcggcggccgcctgcagctca 88
to top
>dbj|AK037724.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched
            library, clone:A130041O12 product:NEUREXIN 1-ALPHA
            PRECURSOR (NEUREXIN I-ALPHA) homolog [Rattus norvegicus],
            full insert sequence
          Length = 3038

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 133  gcggcggccgcctgcagctca 153
            |||||||||||||||||||||
Sbjct: 1328 gcggcggccgcctgcagctca 1348
to top
>gb|AC007682.3| Homo sapiens BAC clone RP11-391D19 from 2, complete sequence
          Length = 189968

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 133    gcggcggccgcctgcagctca 153
              |||||||||||||||||||||
Sbjct: 158961 gcggcggccgcctgcagctca 158941
to top
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 72      ccgaccccgacgccgtggccg 92
               |||||||||||||||||||||
Sbjct: 3039383 ccgaccccgacgccgtggccg 3039363
to top
>dbj|AB093249.2| Mus musculus mRNA for mKIAA0578 protein
          Length = 5783

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 133  gcggcggccgcctgcagctca 153
            |||||||||||||||||||||
Sbjct: 1337 gcggcggccgcctgcagctca 1357
to top
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 132     agcggcggccgcctgcagctc 152
               |||||||||||||||||||||
Sbjct: 1768257 agcggcggccgcctgcagctc 1768277
to top
>gb|AE001825.1| Deinococcus radiodurans R1 chromosome 2, complete sequence
          Length = 412348

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 209    gctctccggcgacccgacctacgacgtgg 237
              ||||||||||||||||| ||||| |||||
Sbjct: 312293 gctctccggcgacccgagctacggcgtgg 312265
to top
>gb|AC151286.4| Mus musculus BAC clone RP23-368B8 from chromosome 17, complete sequence
          Length = 178835

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 133   gcggcggccgcctgcagctca 153
             |||||||||||||||||||||
Sbjct: 14398 gcggcggccgcctgcagctca 14418
to top
>gb|AC165087.4| Mus musculus BAC clone RP23-198K7 from chromosome 17, complete sequence
          Length = 211272

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 133   gcggcggccgcctgcagctca 153
             |||||||||||||||||||||
Sbjct: 88793 gcggcggccgcctgcagctca 88773
to top
>dbj|AB035356.1| Homo sapiens mRNA for neurexin I-alpha protein, complete cds
          Length = 6206

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 133 gcggcggccgcctgcagctca 153
           |||||||||||||||||||||
Sbjct: 446 gcggcggccgcctgcagctca 466
to top
>dbj|AB011150.2| Homo sapiens mRNA for KIAA0578 protein, partial cds
          Length = 8114

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 133 gcggcggccgcctgcagctca 153
           |||||||||||||||||||||
Sbjct: 437 gcggcggccgcctgcagctca 457
to top
>gb|AY751744.1| Danio rerio nicastrin (ncstn) mRNA, complete cds
          Length = 2497

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 115  tcaccaacctgaccgagagc 134
            ||||||||||||||||||||
Sbjct: 1782 tcaccaacctgaccgagagc 1801
to top
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence
          Length = 2090491

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 125    gaccgagagcggcggccgcc 144
              ||||||||||||||||||||
Sbjct: 313872 gaccgagagcggcggccgcc 313853
to top
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 66      gctcccccgaccccgacgccgtgg 89
               |||||||||||||||||| |||||
Sbjct: 2121066 gctcccccgaccccgacgacgtgg 2121043
to top
>ref|XM_877370.1| PREDICTED: Bos taurus similar to RAB3A interacting protein
            (rabin3)-like 1, transcript variant 5 (LOC614335), mRNA
          Length = 2247

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 269  ctccgcgtcctgccgcacca 288
            ||||||||||||||||||||
Sbjct: 1278 ctccgcgtcctgccgcacca 1259
to top
>ref|XM_877322.1| PREDICTED: Bos taurus similar to RAB3A interacting protein
            (rabin3)-like 1, transcript variant 4 (LOC614335), mRNA
          Length = 2004

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 269  ctccgcgtcctgccgcacca 288
            ||||||||||||||||||||
Sbjct: 1035 ctccgcgtcctgccgcacca 1016
to top
>ref|XM_865886.1| PREDICTED: Bos taurus similar to RAB3A interacting protein
            (rabin3)-like 1, transcript variant 2 (LOC614335), mRNA
          Length = 2223

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 269  ctccgcgtcctgccgcacca 288
            ||||||||||||||||||||
Sbjct: 1254 ctccgcgtcctgccgcacca 1235
to top
>gb|BC105507.1| Bos taurus RAB3A interacting protein (rabin3)-like 1, mRNA (cDNA
            clone MGC:128938 IMAGE:8120520), complete cds
          Length = 2240

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 269  ctccgcgtcctgccgcacca 288
            ||||||||||||||||||||
Sbjct: 1240 ctccgcgtcctgccgcacca 1221
to top
>ref|XM_453056.1| Kluyveromyces lactis NRRL Y-1140, KLLA0C19184g predicted mRNA
          Length = 1443

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 444 aacttcttcaatgggatgcagcag 467
           ||||||||||||||||| ||||||
Sbjct: 443 aacttcttcaatgggatacagcag 466
to top
>ref|XM_838083.1| Leishmania major strain Friedlin hypothetical protein (LMJ_0999)
            partial mRNA
          Length = 12525

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 125  gaccgagagcggcggccgcc 144
            ||||||||||||||||||||
Sbjct: 1888 gaccgagagcggcggccgcc 1869
to top
>emb|AL162390.9| Human DNA sequence from clone RP11-386J22 on chromosome 9 Contains the
             SMC5L1 gene for SMC5 structural maintenance of chromosomes
             5-like 1 (yeast) (SMC5, KIAA0594), the BTEB1 gene for
             basic transcription element binding protein 1 (BTEB, KLF9)
             and three CpG islands, complete sequence
          Length = 182427

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 446   cttcttcaatgggatgcagcagcatgtg 473
             |||||||| |||||| ||||||||||||
Sbjct: 42447 cttcttcactgggattcagcagcatgtg 42420
to top
>gb|DQ115865.1| Cyanobacteria phage AS-1 contig_58 genomic sequence
          Length = 984

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 134 cggcggccgcctgcagctca 153
           ||||||||||||||||||||
Sbjct: 164 cggcggccgcctgcagctca 145
to top
>emb|CR382123.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome C of strain NRRL Y-1140
               of Kluyveromyces lactis
          Length = 1753957

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 444     aacttcttcaatgggatgcagcag 467
               ||||||||||||||||| ||||||
Sbjct: 1709936 aacttcttcaatgggatacagcag 1709959
to top
>emb|BX572597.1| Rhodopseudomonas palustris CGA009 complete genome; segment 5/16
          Length = 349737

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 340    acctcggccgcgagaccaccgacg 363
              |||||| |||||||||||||||||
Sbjct: 302284 acctcgtccgcgagaccaccgacg 302307
to top
>gb|AC025905.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0018F16,
             complete sequence
          Length = 179157

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 458   gatgcagcagcatgtgatgagctt 481
             ||||||||| ||||||||||||||
Sbjct: 14078 gatgcagcaccatgtgatgagctt 14055
to top
>emb|AJ748744.1| Haloferax volcanii hjc gene for holliday junction resolvase
          Length = 2000

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 264 ttcgactccgcgtcctgccgcacc 287
           ||||| ||||||||||||||||||
Sbjct: 387 ttcgaatccgcgtcctgccgcacc 410
to top
>gb|AF323606.1|AF323606 Rhodococcus erythropolis picric acid degradation gene cluster,
            partial sequence
          Length = 12500

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 73   cgaccccgacgccgtggccg 92
            ||||||||||||||||||||
Sbjct: 5586 cgaccccgacgccgtggccg 5605
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 458      gatgcagcagcatgtgatgagctt 481
                ||||||||| ||||||||||||||
Sbjct: 16135189 gatgcagcaccatgtgatgagctt 16135166
to top
>ref|NM_001009556.1| Danio rerio nicastrin (ncstn), mRNA
          Length = 2497

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 115  tcaccaacctgaccgagagc 134
            ||||||||||||||||||||
Sbjct: 1782 tcaccaacctgaccgagagc 1801
to top
>dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome
          Length = 1669695

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 322    ggctccacggcgccgtctac 341
              ||||||||||||||||||||
Sbjct: 709715 ggctccacggcgccgtctac 709734
to top
>dbj|AB006206.3| Streptomyces griseus AmfR, AmfA, AmfB, AmfS and AmfT genes and 4
            ORFs, complete cds
          Length = 10657

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 329  cggcgccgtctacctcggccgcga 352
            ||||| ||||||||||||||||||
Sbjct: 9168 cggcggcgtctacctcggccgcga 9145
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 458      gatgcagcagcatgtgatgagctt 481
                ||||||||| ||||||||||||||
Sbjct: 16143430 gatgcagcaccatgtgatgagctt 16143407


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,594,858
Number of Sequences: 3902068
Number of extensions: 2594858
Number of successful extensions: 48192
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 47342
Number of HSP's gapped (non-prelim): 844
length of query: 503
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 481
effective length of database: 17,147,199,772
effective search space: 8247803090332
effective search space used: 8247803090332
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top