ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal37b02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC137744.2| Oryza sativa (japonica cultivar-group) chromosome... 208 1e-50
2dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 208 1e-50
3gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 208 1e-50
4ref|XM_472782.1| Oryza sativa (japonica cultivar-group), predic... 52 0.002
5gb|AC148487.14| Medicago truncatula clone mth2-57f20, complete s... 48 0.029
6gb|AC144401.2| Didelphis virginiana clone LBNL3-270H19, complete... 46 0.12
7emb|AL663017.3|OSJN00149 Oryza sativa genomic DNA, chromosome 4,... 44 0.46
8dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.46
9dbj|BS000210.2| Pan troglodytes chromosome 22 clone:RP43-018H16,... 44 0.46
10emb|AL606653.3|OSJN00104 Oryza sativa genomic DNA, chromosome 4,... 44 0.46
11emb|AL929561.5| Human DNA sequence from clone DAQB-117O11 on chr... 42 1.8
12emb|BX248093.4| Human DNA sequence from clone DASS-357K17 on chr... 42 1.8
13emb|AL662852.9| Human DNA sequence from clone XXbac-228J24 on ch... 42 1.8
14emb|AL645937.6| Human DNA sequence from clone XXbac-171B11 on ch... 42 1.8
15emb|AL359547.26| Human DNA sequence from clone RP11-715G15 on ch... 42 1.8
16gb|BC034912.1| Homo sapiens cDNA clone IMAGE:5272441 42 1.8
17emb|CR774181.3| Human DNA sequence from clone DAAP-270H14 on chr... 42 1.8
18emb|BX927132.7| Human DNA sequence from clone DAMA-405I21 on chr... 42 1.8
19emb|CR388415.2| Human DNA sequence from clone DADB-150K7 on chro... 42 1.8
20emb|AL022727.1|HS80I19 Human DNA sequence from clone RP1-80I19 o... 42 1.8
21gb|AC113444.9| Mus musculus chromosome 15, clone RP23-268C9, com... 40 7.2
22gb|AC159127.8| Mus musculus chromosome 3, clone RP24-214E8, comp... 40 7.2
23gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome 40 7.2
24gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 7.2
25gb|AC148477.3| Homo sapiens 12 BAC RP13-895J2 (Roswell Park Canc... 40 7.2
26gb|AC146619.1| Genomic sequence for Oryza sativa, Nipponbare str... 40 7.2
27gb|AC182644.4| Pan troglodytes BAC clone CH251-64L5 from chromos... 40 7.2
28emb|AL357275.14| Human DNA sequence from clone RP11-534J23 on ch... 40 7.2
29gb|AC134241.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.2
30dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.2
31gb|AC073905.3| Homo sapiens BAC clone RP11-745H15 from 2, comple... 40 7.2
32emb|BX004870.13| Zebrafish DNA sequence from clone CH211-168H9 i... 40 7.2
33gb|AC131727.4| Mus musculus BAC clone RP23-120E19 from 14, compl... 40 7.2
34gb|AC151833.3| Mus musculus BAC clone RP23-374P15 from 14, compl... 40 7.2
35emb|AL672286.9| Mouse DNA sequence from clone RP23-48B17 on chro... 40 7.2
36emb|AL844221.6| Mouse DNA sequence from clone RP23-445C3 on chro... 40 7.2 
>gb|AC137744.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0074L11, complete sequence
          Length = 180703

 Score =  208 bits (105), Expect = 1e-50
 Identities = 261/313 (83%)
 Strand = Plus / Minus

                                                                         
Query: 2     ggaacaatgactttgtagtcttctaccgagggaaagatttcttgtccacggaacttgcag 61
             |||||||||||||| | ||||||||| |||| || |||||||||||| | ||||| || |
Sbjct: 23995 ggaacaatgactttatggtcttctacagaggaaaggatttcttgtccccagaactcgcgg 23936

                                                                         
Query: 62    aggcactcctagagagggaaagatcaatgaagtccctacaagatgaggagcaagcacggt 121
             ||  ||| ||||||||||||||||     |||||| ||||||||||||||||||| || |
Sbjct: 23935 agaaactgctagagagggaaagatgggcaaagtccttacaagatgaggagcaagcgcgat 23876

                                                                         
Query: 122   taaatgcaaagttgtcatttacttctagcactgaggcatttatagaatccactgtagctg 181
             ||||||||  ||  || ||| |||| || |||||||||  | ||||  | ||||| ||||
Sbjct: 23875 taaatgcagcgtcttccttttcttccagaactgaggcacctgtagagcctactgtggctg 23816

                                                                         
Query: 182   gtactcttggagagacccttgaagctaactctaaatatggaaatgaactggtcgataatc 241
             |||| |||||||| || ||||| ||||||||||||||||||||| ||||||  || ||| 
Sbjct: 23815 gtacccttggagaaactcttgaggctaactctaaatatggaaataaactggatgagaatt 23756

                                                                         
Query: 242   acgtggacaagatgacaagaactgtagaagctgcaaagcatgctgatcttgtaaggaagt 301
             | | | |||||||||| |||||||||||||||||||  |||||||| |||||||||||| 
Sbjct: 23755 atgagaacaagatgactagaactgtagaagctgcaagacatgctgaccttgtaaggaagc 23696

                          
Query: 302   tagagtggaagct 314
             |||||||||||||
Sbjct: 23695 tagagtggaagct 23683



 Score =  176 bits (89), Expect = 5e-41
 Identities = 134/149 (89%)
 Strand = Plus / Minus

                                                                         
Query: 333   gatagcaaaagctgaaagagtgcttggaaaagtcgagactgccttgaagccaactgaaga 392
             ||||| |||||||||||| || ||||||||||| ||||| ||| ||||||||||||||| 
Sbjct: 23287 gatagaaaaagctgaaagggtccttggaaaagttgagacagccctgaagccaactgaagg 23228

                                                                         
Query: 393   taccaaaccacctgaaacaataaccgatgaagagaggttcatgtttcggaaacttggttt 452
             || | |||| |||||||||||||| ||||||||||| ||||||||||||||||||||| |
Sbjct: 23227 tatccaaccgcctgaaacaataacagatgaagagagattcatgtttcggaaacttggtct 23168

                                          
Query: 453   aaggatgaaggcatttttgctccttggta 481
             |||||||||||||||  ||||||||||||
Sbjct: 23167 aaggatgaaggcattcctgctccttggta 23139



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 44/46 (95%)
 Strand = Plus / Minus

                                                           
Query: 484   agaggagtttttgatggcacaatcgaaaatatgcacttgcactgga 529
             |||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 22904 agaggagtttttgatggcacgattgaaaatatgcacttgcactgga 22859
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  208 bits (105), Expect = 1e-50
 Identities = 261/313 (83%)
 Strand = Plus / Minus

                                                                            
Query: 2        ggaacaatgactttgtagtcttctaccgagggaaagatttcttgtccacggaacttgcag 61
                |||||||||||||| | ||||||||| |||| || |||||||||||| | ||||| || |
Sbjct: 21671942 ggaacaatgactttatggtcttctacagaggaaaggatttcttgtccccagaactcgcgg 21671883

                                                                            
Query: 62       aggcactcctagagagggaaagatcaatgaagtccctacaagatgaggagcaagcacggt 121
                ||  ||| ||||||||||||||||     |||||| ||||||||||||||||||| || |
Sbjct: 21671882 agaaactgctagagagggaaagatgggcaaagtccttacaagatgaggagcaagcgcgat 21671823

                                                                            
Query: 122      taaatgcaaagttgtcatttacttctagcactgaggcatttatagaatccactgtagctg 181
                ||||||||  ||  || ||| |||| || |||||||||  | ||||  | ||||| ||||
Sbjct: 21671822 taaatgcagcgtcttccttttcttccagaactgaggcacctgtagagcctactgtggctg 21671763

                                                                            
Query: 182      gtactcttggagagacccttgaagctaactctaaatatggaaatgaactggtcgataatc 241
                |||| |||||||| || ||||| ||||||||||||||||||||| ||||||  || ||| 
Sbjct: 21671762 gtacccttggagaaactcttgaggctaactctaaatatggaaataaactggatgagaatt 21671703

                                                                            
Query: 242      acgtggacaagatgacaagaactgtagaagctgcaaagcatgctgatcttgtaaggaagt 301
                | | | |||||||||| |||||||||||||||||||  |||||||| |||||||||||| 
Sbjct: 21671702 atgagaacaagatgactagaactgtagaagctgcaagacatgctgaccttgtaaggaagc 21671643

                             
Query: 302      tagagtggaagct 314
                |||||||||||||
Sbjct: 21671642 tagagtggaagct 21671630



 Score =  176 bits (89), Expect = 5e-41
 Identities = 134/149 (89%)
 Strand = Plus / Minus

                                                                            
Query: 333      gatagcaaaagctgaaagagtgcttggaaaagtcgagactgccttgaagccaactgaaga 392
                ||||| |||||||||||| || ||||||||||| ||||| ||| ||||||||||||||| 
Sbjct: 21671234 gatagaaaaagctgaaagggtccttggaaaagttgagacagccctgaagccaactgaagg 21671175

                                                                            
Query: 393      taccaaaccacctgaaacaataaccgatgaagagaggttcatgtttcggaaacttggttt 452
                || | |||| |||||||||||||| ||||||||||| ||||||||||||||||||||| |
Sbjct: 21671174 tatccaaccgcctgaaacaataacagatgaagagagattcatgtttcggaaacttggtct 21671115

                                             
Query: 453      aaggatgaaggcatttttgctccttggta 481
                |||||||||||||||  ||||||||||||
Sbjct: 21671114 aaggatgaaggcattcctgctccttggta 21671086



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 44/46 (95%)
 Strand = Plus / Minus

                                                              
Query: 484      agaggagtttttgatggcacaatcgaaaatatgcacttgcactgga 529
                |||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 21670851 agaggagtttttgatggcacgattgaaaatatgcacttgcactgga 21670806
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  208 bits (105), Expect = 1e-50
 Identities = 261/313 (83%)
 Strand = Plus / Minus

                                                                            
Query: 2        ggaacaatgactttgtagtcttctaccgagggaaagatttcttgtccacggaacttgcag 61
                |||||||||||||| | ||||||||| |||| || |||||||||||| | ||||| || |
Sbjct: 21982141 ggaacaatgactttatggtcttctacagaggaaaggatttcttgtccccagaactcgcgg 21982082

                                                                            
Query: 62       aggcactcctagagagggaaagatcaatgaagtccctacaagatgaggagcaagcacggt 121
                ||  ||| ||||||||||||||||     |||||| ||||||||||||||||||| || |
Sbjct: 21982081 agaaactgctagagagggaaagatgggcaaagtccttacaagatgaggagcaagcgcgat 21982022

                                                                            
Query: 122      taaatgcaaagttgtcatttacttctagcactgaggcatttatagaatccactgtagctg 181
                ||||||||  ||  || ||| |||| || |||||||||  | ||||  | ||||| ||||
Sbjct: 21982021 taaatgcagcgtcttccttttcttccagaactgaggcacctgtagagcctactgtggctg 21981962

                                                                            
Query: 182      gtactcttggagagacccttgaagctaactctaaatatggaaatgaactggtcgataatc 241
                |||| |||||||| || ||||| ||||||||||||||||||||| ||||||  || ||| 
Sbjct: 21981961 gtacccttggagaaactcttgaggctaactctaaatatggaaataaactggatgagaatt 21981902

                                                                            
Query: 242      acgtggacaagatgacaagaactgtagaagctgcaaagcatgctgatcttgtaaggaagt 301
                | | | |||||||||| |||||||||||||||||||  |||||||| |||||||||||| 
Sbjct: 21981901 atgagaacaagatgactagaactgtagaagctgcaagacatgctgaccttgtaaggaagc 21981842

                             
Query: 302      tagagtggaagct 314
                |||||||||||||
Sbjct: 21981841 tagagtggaagct 21981829



 Score =  176 bits (89), Expect = 5e-41
 Identities = 134/149 (89%)
 Strand = Plus / Minus

                                                                            
Query: 333      gatagcaaaagctgaaagagtgcttggaaaagtcgagactgccttgaagccaactgaaga 392
                ||||| |||||||||||| || ||||||||||| ||||| ||| ||||||||||||||| 
Sbjct: 21981433 gatagaaaaagctgaaagggtccttggaaaagttgagacagccctgaagccaactgaagg 21981374

                                                                            
Query: 393      taccaaaccacctgaaacaataaccgatgaagagaggttcatgtttcggaaacttggttt 452
                || | |||| |||||||||||||| ||||||||||| ||||||||||||||||||||| |
Sbjct: 21981373 tatccaaccgcctgaaacaataacagatgaagagagattcatgtttcggaaacttggtct 21981314

                                             
Query: 453      aaggatgaaggcatttttgctccttggta 481
                |||||||||||||||  ||||||||||||
Sbjct: 21981313 aaggatgaaggcattcctgctccttggta 21981285



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 44/46 (95%)
 Strand = Plus / Minus

                                                              
Query: 484      agaggagtttttgatggcacaatcgaaaatatgcacttgcactgga 529
                |||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 21981050 agaggagtttttgatggcacgattgaaaatatgcacttgcactgga 21981005
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>ref|XM_472782.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3039

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 86/106 (81%)
 Strand = Plus / Plus

                                                                        
Query: 424  gagaggttcatgtttcggaaacttggtttaaggatgaaggcatttttgctccttggtaga 483
            ||||||| ||||||  ||||| ||||||||| ||||||  |||| ||  | || || || 
Sbjct: 1750 gagaggtacatgttgaggaaagttggtttaaagatgaaatcattcttattgctaggaagg 1809

                                                          
Query: 484  agaggagtttttgatggcacaatcgaaaatatgcacttgcactgga 529
            ||||||||||||||||| ||  | |||||||||||| | |||||||
Sbjct: 1810 agaggagtttttgatggaactgttgaaaatatgcaccttcactgga 1855
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>gb|AC148487.14| Medicago truncatula clone mth2-57f20, complete sequence
          Length = 119671

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                                 
Query: 478   ggtagaagaggagtttttgatggcacaatcgaaaatatgcacttgcactgga 529
             |||||| | ||||||||||| || || ||||| || ||||||||||||||||
Sbjct: 97315 ggtagacgtggagtttttgacggtactatcgagaacatgcacttgcactgga 97264



 Score = 44.1 bits (22), Expect = 0.46
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 403   cctgaaacaataaccgatgaagagaggttcatgtttcg 440
             |||||||  ||||||||||||||||| || ||||||||
Sbjct: 97583 cctgaaagtataaccgatgaagagagatttatgtttcg 97546
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>gb|AC144401.2| Didelphis virginiana clone LBNL3-270H19, complete sequence
          Length = 180378

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 338    caaaagctgaaagagtgcttgga 360
              |||||||||||||||||||||||
Sbjct: 100498 caaaagctgaaagagtgcttgga 100520
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>emb|AL663017.3|OSJN00149 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0060P14,
             complete sequence
          Length = 139418

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                           
Query: 484   agaggagtttttgatggcacaatcgaaaatatgcacttgcactgga 529
             ||||||||||||||||| ||  | |||||||||||| | |||||||
Sbjct: 79071 agaggagtttttgatggaactgttgaaaatatgcaccttcactgga 79026
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                              
Query: 484      agaggagtttttgatggcacaatcgaaaatatgcacttgcactgga 529
                ||||||||||||||||| ||  | |||||||||||| | |||||||
Sbjct: 23188879 agaggagtttttgatggaactgttgaaaatatgcaccttcactgga 23188834
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>dbj|BS000210.2| Pan troglodytes chromosome 22 clone:RP43-018H16, map 22, complete
             sequences
          Length = 148120

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 236   ataatcacgtggacaagatgac 257
             ||||||||||||||||||||||
Sbjct: 84897 ataatcacgtggacaagatgac 84918
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>emb|AL606653.3|OSJN00104 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0048E02,
             complete sequence
          Length = 121337

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                           
Query: 484   agaggagtttttgatggcacaatcgaaaatatgcacttgcactgga 529
             ||||||||||||||||| ||  | |||||||||||| | |||||||
Sbjct: 27032 agaggagtttttgatggaactgttgaaaatatgcaccttcactgga 26987
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>emb|AL929561.5| Human DNA sequence from clone DAQB-117O11 on chromosome 6 Contains the
              KRT18P1 pseudogene 1 for keratin 18, the HCG15 gene for the
              novel transcript HLA complex group 15, the HCG16 gene for
              the novel transcript HLA complex group 16, the ZNF311 gene
              for zinc finger protein 311, the OR2AD1P pseudogene for the
              olfactory receptor, family 2, subfamily AD, member 1, the
              OR2W1 gene for olfactory receptor, family 2, subfamily W,
              member 1, the OR2P1P pseudogene for olfactory receptor,
              family 2, subfamily P, member 1, the SARAP pseudogene for
              SAR1a gene homolog (S. cerevisiae), the OR2B3 gene for
              olfactory receptor, family 2, subfamily B, member 3, the
              OR2J1P pseudogene for olfactory receptor, family 2,
              subfamily J, member 1, the OR2J3 gene for olfactory
              receptor, family 2, subfamily J, member 3, the OR2N1P
              pseudogene for olfactory receptor, family 2, subfamily N,
              member 1 and 2 CpG islands, complete sequence
          Length = 181111

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 319    cttgcagagaaaaggatagcaaaag 343
              |||| ||||||||||||||||||||
Sbjct: 165701 cttgaagagaaaaggatagcaaaag 165725
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>emb|BX248093.4| Human DNA sequence from clone DASS-357K17 on chromosome 6, complete
             sequence
          Length = 111633

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 319   cttgcagagaaaaggatagcaaaag 343
             |||| ||||||||||||||||||||
Sbjct: 43537 cttgaagagaaaaggatagcaaaag 43561
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>emb|AL662852.9| Human DNA sequence from clone XXbac-228J24 on chromosome 6 contains the
             OR2P1P, OR2J1P, OR2N1P, OR2J4P pseudogenes for olfactory
             receptor, family 2, subfamily P, member 1, subfamily J,
             member 1, subfamily N, member 1, subfamily J, member 4,
             the OR2B3, OR2J3, OR2J2 gene for olfactory receptor,
             family 2, subfamily B, member 3, subfamily J, member 3,
             subfamily J member 2, a GTp-binding protein pseudogene and
             two CpG islands, complete sequence
          Length = 142562

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 319   cttgcagagaaaaggatagcaaaag 343
             |||| ||||||||||||||||||||
Sbjct: 67697 cttgaagagaaaaggatagcaaaag 67721
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>emb|AL645937.6| Human DNA sequence from clone XXbac-171B11 on chromosome 6 contains the
             OR2J3 and OR2J2 genes for olfactory receptor, family 2,
             subfamily J, members 2 and 3, the OR2J1P, OR2N1P, OR2J4P,
             OR2H4P and OR2G1P pseudogenes for olfactory receptor,
             family 2, subfamily J, members 1 and 4, subfamily G,
             member 1, subfamily H, member 4 and subfamily N, member 1
             and two CpG islands, complete sequence
          Length = 147667

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 319   cttgcagagaaaaggatagcaaaag 343
             |||| ||||||||||||||||||||
Sbjct: 31047 cttgaagagaaaaggatagcaaaag 31071
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>emb|AL359547.26| Human DNA sequence from clone RP11-715G15 on chromosome 6 Contains a
             novel gene and the 5' end of the C6orf103 gene for
             chromosome 6 open reading frame 103, complete sequence
          Length = 129245

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 476   ttggtagaagaggagtttttg 496
             |||||||||||||||||||||
Sbjct: 23936 ttggtagaagaggagtttttg 23956
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>gb|BC034912.1| Homo sapiens cDNA clone IMAGE:5272441
          Length = 2202

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 476  ttggtagaagaggagtttttg 496
            |||||||||||||||||||||
Sbjct: 1071 ttggtagaagaggagtttttg 1051
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>emb|CR774181.3| Human DNA sequence from clone DAAP-270H14 on chromosome 6, complete
            sequence
          Length = 52780

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 319  cttgcagagaaaaggatagcaaaag 343
            |||| ||||||||||||||||||||
Sbjct: 4198 cttgaagagaaaaggatagcaaaag 4222
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>emb|BX927132.7| Human DNA sequence from clone DAMA-405I21 on chromosome 6, complete
             sequence
          Length = 93511

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 319   cttgcagagaaaaggatagcaaaag 343
             |||| ||||||||||||||||||||
Sbjct: 10736 cttgaagagaaaaggatagcaaaag 10760
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>emb|CR388415.2| Human DNA sequence from clone DADB-150K7 on chromosome 6, complete
             sequence
          Length = 102196

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 319   cttgcagagaaaaggatagcaaaag 343
             |||| ||||||||||||||||||||
Sbjct: 37675 cttgaagagaaaaggatagcaaaag 37699
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>emb|AL022727.1|HS80I19 Human DNA sequence from clone RP1-80I19 on chromosome 6p21.31-22.2
             Contains OR2B3, OR2J3 and OR2J2 genes for olfactory
             receptors 2B3, 2J3 and 2J2 and olfactory receptor 2J1,
             2N1, 2J4, and 2H4 pseudogenes OR2J1P, OR2N1P, OR2J4P and
             OR2H4P. Contains STSs, GSSs and two CpG islands, complete
             sequence
          Length = 144868

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 319   cttgcagagaaaaggatagcaaaag 343
             |||| ||||||||||||||||||||
Sbjct: 50101 cttgaagagaaaaggatagcaaaag 50125
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>gb|AC113444.9| Mus musculus chromosome 15, clone RP23-268C9, complete sequence
          Length = 189539

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 302   tagagtggaagcttgcacttgcag 325
             ||||||||| ||||||||||||||
Sbjct: 92745 tagagtggatgcttgcacttgcag 92768
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>gb|AC159127.8| Mus musculus chromosome 3, clone RP24-214E8, complete sequence
          Length = 195609

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 185   ctcttggagagacccttgaa 204
             ||||||||||||||||||||
Sbjct: 90004 ctcttggagagacccttgaa 89985
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>gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome
          Length = 3481691

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 204     agctaactctaaatatggaa 223
               ||||||||||||||||||||
Sbjct: 2091142 agctaactctaaatatggaa 2091161
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 207     taactctaaatatggaaatg 226
               ||||||||||||||||||||
Sbjct: 5905563 taactctaaatatggaaatg 5905582
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>gb|AC148477.3| Homo sapiens 12 BAC RP13-895J2 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 160802

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 45     gtccacggaacttgcagagg 64
              ||||||||||||||||||||
Sbjct: 128386 gtccacggaacttgcagagg 128367
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>gb|AC146619.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNAa0021B21, from chromosome 3, complete sequence
          Length = 139208

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 207    taactctaaatatggaaatg 226
              ||||||||||||||||||||
Sbjct: 134393 taactctaaatatggaaatg 134412
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>gb|AC182644.4| Pan troglodytes BAC clone CH251-64L5 from chromosome 4, complete
            sequence
          Length = 157801

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 256  acaagaactgtagaagctgcaaag 279
            |||||||||||| |||||||||||
Sbjct: 7741 acaagaactgtaaaagctgcaaag 7718
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>emb|AL357275.14| Human DNA sequence from clone RP11-534J23 on chromosome 13, complete
             sequence
          Length = 68209

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 204   agctaactctaaatatggaaatga 227
             |||||||||||| |||||||||||
Sbjct: 11334 agctaactctaactatggaaatga 11311
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>gb|AC134241.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0085F02, complete sequence
          Length = 128535

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 207   taactctaaatatggaaatg 226
             ||||||||||||||||||||
Sbjct: 55185 taactctaaatatggaaatg 55204
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 207     taactctaaatatggaaatg 226
               ||||||||||||||||||||
Sbjct: 5904776 taactctaaatatggaaatg 5904795
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>gb|AC073905.3| Homo sapiens BAC clone RP11-745H15 from 2, complete sequence
          Length = 111560

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 335   tagcaaaagctgaaagagtgcttggaaa 362
             |||| ||||||||||||| |||||||||
Sbjct: 89938 tagctaaagctgaaagagggcttggaaa 89965
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>emb|BX004870.13| Zebrafish DNA sequence from clone CH211-168H9 in linkage group 5,
              complete sequence
          Length = 153127

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 121    ttaaatgcaaagttgtcatt 140
              ||||||||||||||||||||
Sbjct: 128276 ttaaatgcaaagttgtcatt 128295
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>gb|AC131727.4| Mus musculus BAC clone RP23-120E19 from 14, complete sequence
          Length = 208338

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 200   ttgaagctaactctaaatat 219
             ||||||||||||||||||||
Sbjct: 41913 ttgaagctaactctaaatat 41894
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>gb|AC151833.3| Mus musculus BAC clone RP23-374P15 from 14, complete sequence
          Length = 197918

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 200    ttgaagctaactctaaatat 219
              ||||||||||||||||||||
Sbjct: 120307 ttgaagctaactctaaatat 120288
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>emb|AL672286.9| Mouse DNA sequence from clone RP23-48B17 on chromosome X, complete
             sequence
          Length = 209697

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 373   gccttgaagccaactgaagatacc 396
             |||||||| |||||||||||||||
Sbjct: 75279 gccttgaaaccaactgaagatacc 75256
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>emb|AL844221.6| Mouse DNA sequence from clone RP23-445C3 on chromosome X, complete
             sequence
          Length = 188627

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 450   tttaaggatgaaggcatttt 469
             ||||||||||||||||||||
Sbjct: 17026 tttaaggatgaaggcatttt 17045


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,034,829
Number of Sequences: 3902068
Number of extensions: 5034829
Number of successful extensions: 91323
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 91101
Number of HSP's gapped (non-prelim): 213
length of query: 529
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 506
effective length of database: 17,143,297,704
effective search space: 8674508638224
effective search space used: 8674508638224
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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