ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal36m01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_470493.1| Oryza sativa (japonica cultivar-group), mRNA 579 e-162
2dbj|AK102968.1| Oryza sativa (japonica cultivar-group) cDNA clon... 579 e-162
3gb|AY106510.1| Zea mays PCO107914 mRNA sequence 375 e-100
4gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 331 1e-87
5gb|AC096690.5| Oryza sativa chromosome 3 BAC OSJNBa0059G06 genom... 331 1e-87
6dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 331 1e-87
7gb|BT019136.1| Zea mays clone Contig775.F mRNA sequence 196 5e-47
8gb|AC108433.9| Mus musculus chromosome 18, clone RP23-194M19, co... 42 1.9
9gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 42 1.9
10emb|AL035419.12|HS1100H13 Human DNA sequence from clone RP5-1100... 42 1.9
11gb|AC114550.4| Homo sapiens chromosome 8, clone CTD-3023L14, com... 42 1.9
12gb|AC160128.2| Mus musculus BAC clone RP23-286G17 from chromosom... 42 1.9
13gb|AC155808.2| Mus musculus BAC clone RP24-267H3 from 12, comple... 42 1.9
14ref|NM_177329.2| Mus musculus RIKEN cDNA A530053G22 gene (A53005... 40 7.4
15gb|AC134470.5| Mus musculus BAC clone RP23-120K22 from chromosom... 40 7.4
16gb|AC113983.13| Mus musculus chromosome 5, clone RP24-95M11, com... 40 7.4
17gb|AC009395.7| Drosophila melanogaster clone BACR01D01, complete... 40 7.4
18gb|AC120418.10| Mus musculus chromosome 6, clone RP24-474I24, co... 40 7.4
19gb|AF178030.3| Homo sapiens chromosome 8 multiple clones map q23... 40 7.4
20emb|CR759945.8| Zebrafish DNA sequence from clone CH211-167E4 in... 40 7.4
21gb|AC104889.10| Mus musculus chromosome 5, clone RP23-201D22, co... 40 7.4
22ref|NM_169826.1| Drosophila melanogaster CG31224-RA (CG31224), mRNA 40 7.4
23gb|AC105389.3| Homo sapiens BAC clone RP11-227F19 from 4, comple... 40 7.4
24gb|AY075377.1| Drosophila melanogaster LD06123 full length cDNA 40 7.4
25dbj|AK080052.1| Mus musculus adult male aorta and vein cDNA, RIK... 40 7.4
26dbj|AK079908.1| Mus musculus adult male aorta and vein cDNA, RIK... 40 7.4
27gb|BC051224.1| Mus musculus RIKEN cDNA A530053G22 gene, mRNA (cD... 40 7.4
28dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
29gb|AC007812.6|AC007812 Drosophila melanogaster, chromosome 3R, r... 40 7.4
30gb|AC154657.2| Mus musculus BAC clone RP24-269C17 from chromosom... 40 7.4
31gb|AC025041.7|AC025041 Homo sapiens chromosome 15 clone RP11-316... 40 7.4
32gb|AC016912.7| Homo sapiens BAC clone RP11-480A6 from 2, complet... 40 7.4
33ref|XM_575753.1| PREDICTED: Rattus norvegicus similar to syntrop... 40 7.4
34dbj|AP003878.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
35dbj|AP004590.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
36emb|Z69996.1|TLPCB7 T.ledebourii mRNA for In-2-like dormancy rel... 40 7.4
37gb|AE003723.5| Drosophila melanogaster chromosome 3R, section 61... 40 7.4
38emb|BX088726.13| Zebrafish DNA sequence from clone DKEY-149G13 i... 40 7.4
39gb|AC153617.3| Mus musculus 6 BAC RP23-177G20 (Roswell Park Canc... 40 7.4
40gb|AC147973.3| Gallus gallus BAC clone CH261-44G9 from chromosom... 40 7.4
41gb|AC102620.11| Mus musculus chromosome 5, clone RP23-429E19, co... 40 7.4
42emb|AL845280.4| Mouse DNA sequence from clone RP23-265L1 on chro... 40 7.4 
>ref|XM_470493.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1724

 Score =  579 bits (292), Expect = e-162
 Identities = 470/528 (89%), Gaps = 1/528 (0%)
 Strand = Plus / Plus

                                                                       
Query: 23  gcctgcaacctagcc-ccgtatgcgcggatggggttgtgagagtattcaggatcgatgat 81
           ||||||||||| ||| ||||||| |||||||| | ||| |||||||||||| | ||||||
Sbjct: 385 gcctgcaacctggccaccgtatgtgcggatggagctgtcagagtattcagggttgatgat 444

                                                                       
Query: 82  gcgtcaagcaagagctttaagattctgaagataaacttgcctgctggggcacatcccact 141
           |  ||||||||||||||||| ||||||| ||| |||||||| |||||||||||||| || 
Sbjct: 445 gtctcaagcaagagctttaaaattctgaggatcaacttgcccgctggggcacatcctaca 504

                                                                       
Query: 142 gccatcgcttactcagaaggggcatcatccgttgttgtggcagcacaggcgctgttaggc 201
           || || |||| |||| ||||||||||||| |||||||||||||| || || || ||||||
Sbjct: 505 gctattgctttctcacaaggggcatcatcagttgttgtggcagcgcaagcacttttaggc 564

                                                                       
Query: 202 tcgtcgctctacatgtatgcggatgttggtgctcctccaactgggggaaacaaacagcag 261
           || || ||||||||||||||||||||||||||||||||| |||| |||||||||||||||
Sbjct: 565 tcatctctctacatgtatgcggatgttggtgctcctccagctggcggaaacaaacagcag 624

                                                                       
Query: 262 ggcaagctttctcctcctgagatcaagtgggatcacaaaaagattcatggcaaggaatca 321
           |||||||||||||| |||||||| |||||||| |||   |||||||| |||||||| |||
Sbjct: 625 ggcaagctttctccccctgagataaagtgggaacaccgtaagattcacggcaaggagtca 684

                                                                       
Query: 322 gtgctgaaccttgcggcagctcgtgcgactcatgggactggtgatgggagcacaatagtg 381
           |||||||| ||||||||||||||||| ||  |||||||||||||||| ||||||||| ||
Sbjct: 685 gtgctgaatcttgcggcagctcgtgcaacctatgggactggtgatggcagcacaatattg 744

                                                                       
Query: 382 atttcttgctctgaagcaactgatatcaaaatatggcatggaaagagtggcaaagagttg 441
           |||||||||||||||||||||||||||||||| |||||||| || ||||| || ||||||
Sbjct: 745 atttcttgctctgaagcaactgatatcaaaatttggcatgggaaaagtggaaaggagttg 804

                                                                       
Query: 442 ggaacagttgacactaatcagttaaaaaacaatatggctgacatatccccaaatggccgc 501
           |||||||| ||||| ||||| || ||||| ||||||||||| ||||||||||||||||| 
Sbjct: 805 ggaacagtcgacaccaatcaattgaaaaataatatggctgatatatccccaaatggccgt 864

                                                           
Query: 502 ttcattgctgctgcagctttcacagctgatgttaaggtgtgggagatt 549
           ||||| |||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 865 ttcatagctgctgcagcttttacagctgatgtcaaggtgtgggagatt 912
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>dbj|AK102968.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033115J18, full
           insert sequence
          Length = 1749

 Score =  579 bits (292), Expect = e-162
 Identities = 470/528 (89%), Gaps = 1/528 (0%)
 Strand = Plus / Plus

                                                                       
Query: 23  gcctgcaacctagcc-ccgtatgcgcggatggggttgtgagagtattcaggatcgatgat 81
           ||||||||||| ||| ||||||| |||||||| | ||| |||||||||||| | ||||||
Sbjct: 405 gcctgcaacctggccaccgtatgtgcggatggagctgtcagagtattcagggttgatgat 464

                                                                       
Query: 82  gcgtcaagcaagagctttaagattctgaagataaacttgcctgctggggcacatcccact 141
           |  ||||||||||||||||| ||||||| ||| |||||||| |||||||||||||| || 
Sbjct: 465 gtctcaagcaagagctttaaaattctgaggatcaacttgcccgctggggcacatcctaca 524

                                                                       
Query: 142 gccatcgcttactcagaaggggcatcatccgttgttgtggcagcacaggcgctgttaggc 201
           || || |||| |||| ||||||||||||| |||||||||||||| || || || ||||||
Sbjct: 525 gctattgctttctcacaaggggcatcatcagttgttgtggcagcgcaagcacttttaggc 584

                                                                       
Query: 202 tcgtcgctctacatgtatgcggatgttggtgctcctccaactgggggaaacaaacagcag 261
           || || ||||||||||||||||||||||||||||||||| |||| |||||||||||||||
Sbjct: 585 tcatctctctacatgtatgcggatgttggtgctcctccagctggcggaaacaaacagcag 644

                                                                       
Query: 262 ggcaagctttctcctcctgagatcaagtgggatcacaaaaagattcatggcaaggaatca 321
           |||||||||||||| |||||||| |||||||| |||   |||||||| |||||||| |||
Sbjct: 645 ggcaagctttctccccctgagataaagtgggaacaccgtaagattcacggcaaggagtca 704

                                                                       
Query: 322 gtgctgaaccttgcggcagctcgtgcgactcatgggactggtgatgggagcacaatagtg 381
           |||||||| ||||||||||||||||| ||  |||||||||||||||| ||||||||| ||
Sbjct: 705 gtgctgaatcttgcggcagctcgtgcaacctatgggactggtgatggcagcacaatattg 764

                                                                       
Query: 382 atttcttgctctgaagcaactgatatcaaaatatggcatggaaagagtggcaaagagttg 441
           |||||||||||||||||||||||||||||||| |||||||| || ||||| || ||||||
Sbjct: 765 atttcttgctctgaagcaactgatatcaaaatttggcatgggaaaagtggaaaggagttg 824

                                                                       
Query: 442 ggaacagttgacactaatcagttaaaaaacaatatggctgacatatccccaaatggccgc 501
           |||||||| ||||| ||||| || ||||| ||||||||||| ||||||||||||||||| 
Sbjct: 825 ggaacagtcgacaccaatcaattgaaaaataatatggctgatatatccccaaatggccgt 884

                                                           
Query: 502 ttcattgctgctgcagctttcacagctgatgttaaggtgtgggagatt 549
           ||||| |||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 885 ttcatagctgctgcagcttttacagctgatgtcaaggtgtgggagatt 932
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>gb|AY106510.1| Zea mays PCO107914 mRNA sequence
          Length = 1820

 Score =  375 bits (189), Expect = e-100
 Identities = 411/485 (84%)
 Strand = Plus / Plus

                                                                       
Query: 64  gtattcaggatcgatgatgcgtcaagcaagagctttaagattctgaagataaacttgcct 123
           |||||||||||||||||| | || ||||||||||| |||||||| | |||||||||||| 
Sbjct: 445 gtattcaggatcgatgatacctctagcaagagcttcaagattcttaggataaacttgcca 504

                                                                       
Query: 124 gctggggcacatcccactgccatcgcttactcagaaggggcatcatccgttgttgtggca 183
           ||||| || || || || ||  |  ||| |||||| ||| ||||||| ||||||||||| 
Sbjct: 505 gctggagcgcaccctacggctgttactttctcagaggggtcatcatctgttgttgtggcg 564

                                                                       
Query: 184 gcacaggcgctgttaggctcgtcgctctacatgtatgcggatgttggtgctcctccaact 243
           || ||||||||  | || || || || || ||||||||||||||| | ||||||||||| 
Sbjct: 565 gcgcaggcgcttctgggatcatctctttatatgtatgcggatgttagcgctcctccaacc 624

                                                                       
Query: 244 gggggaaacaaacagcagggcaagctttctcctcctgagatcaagtgggatcacaaaaag 303
           | || |||||||| |||||| ||||||||||| ||||| |||||||||  ||||   |||
Sbjct: 625 gcggaaaacaaactgcagggaaagctttctccacctgaaatcaagtggagtcaccccaag 684

                                                                       
Query: 304 attcatggcaaggaatcagtgctgaaccttgcggcagctcgtgcgactcatgggactggt 363
           || ||||||||||| || ||||| |||||||| || || ||||| ||||||||| |||||
Sbjct: 685 atacatggcaaggagtctgtgctcaaccttgcagcggcccgtgcaactcatgggtctggt 744

                                                                       
Query: 364 gatgggagcacaatagtgatttcttgctctgaagcaactgatatcaaaatatggcatgga 423
           ||||||||||| ||  | ||||| ||||| |||||||||||||||||| | |||||||| 
Sbjct: 745 gatgggagcactattatcatttcatgctcagaagcaactgatatcaaagtttggcatggg 804

                                                                       
Query: 424 aagagtggcaaagagttgggaacagttgacactaatcagttaaaaaacaatatggctgac 483
           |||||||| || ||||| || ||||||||||| |||||||||||||| ||||||||||||
Sbjct: 805 aagagtgggaaggagtttggtacagttgacaccaatcagttaaaaaataatatggctgac 864

                                                                       
Query: 484 atatccccaaatggccgcttcattgctgctgcagctttcacagctgatgttaaggtgtgg 543
           |||||||||||||| |||||||| |||||||| ||||| || |||||||| |||||||||
Sbjct: 865 atatccccaaatggtcgcttcatagctgctgcggcttttactgctgatgtcaaggtgtgg 924

                
Query: 544 gagat 548
           |||||
Sbjct: 925 gagat 929
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  331 bits (167), Expect = 1e-87
 Identities = 263/295 (89%)
 Strand = Plus / Plus

                                                                            
Query: 103      attctgaagataaacttgcctgctggggcacatcccactgccatcgcttactcagaaggg 162
                ||||||| ||| |||||||| |||||||||||||| || || || |||| |||| |||||
Sbjct: 35926149 attctgaggatcaacttgcccgctggggcacatcctacagctattgctttctcacaaggg 35926208

                                                                            
Query: 163      gcatcatccgttgttgtggcagcacaggcgctgttaggctcgtcgctctacatgtatgcg 222
                |||||||| |||||||||||||| || || || |||||||| || |||||||||||||||
Sbjct: 35926209 gcatcatcagttgttgtggcagcgcaagcacttttaggctcatctctctacatgtatgcg 35926268

                                                                            
Query: 223      gatgttggtgctcctccaactgggggaaacaaacagcagggcaagctttctcctcctgag 282
                |||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 35926269 gatgttggtgctcctccagctggcggaaacaaacagcagggcaagctttctccccctgag 35926328

                                                                            
Query: 283      atcaagtgggatcacaaaaagattcatggcaaggaatcagtgctgaaccttgcggcagct 342
                || |||||||| |||   |||||||| |||||||| ||||||||||| ||||||||||||
Sbjct: 35926329 ataaagtgggaacaccgtaagattcacggcaaggagtcagtgctgaatcttgcggcagct 35926388

                                                                       
Query: 343      cgtgcgactcatgggactggtgatgggagcacaatagtgatttcttgctctgaag 397
                ||||| ||  |||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 35926389 cgtgcaacctatgggactggtgatggcagcacaatattgatttcttgctctgaag 35926443



 Score =  167 bits (84), Expect = 5e-38
 Identities = 129/144 (89%)
 Strand = Plus / Plus

                                                                            
Query: 396      agcaactgatatcaaaatatggcatggaaagagtggcaaagagttgggaacagttgacac 455
                |||||||||||||||||| |||||||| || ||||| || |||||||||||||| |||||
Sbjct: 35926522 agcaactgatatcaaaatttggcatgggaaaagtggaaaggagttgggaacagtcgacac 35926581

                                                                            
Query: 456      taatcagttaaaaaacaatatggctgacatatccccaaatggccgcttcattgctgctgc 515
                 ||||| || ||||| ||||||||||| ||||||||||||||||| ||||| ||||||||
Sbjct: 35926582 caatcaattgaaaaataatatggctgatatatccccaaatggccgtttcatagctgctgc 35926641

                                        
Query: 516      agctttcacagctgatgttaaggt 539
                |||||| ||||||||||| |||||
Sbjct: 35926642 agcttttacagctgatgtcaaggt 35926665



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 55/63 (87%)
 Strand = Plus / Plus

                                                                            
Query: 40       gtatgcgcggatggggttgtgagagtattcaggatcgatgatgcgtcaagcaagagcttt 99
                ||||| |||||||| | ||| |||||||||||| | |||||||  |||||||||||||||
Sbjct: 35926001 gtatgtgcggatggagctgtcagagtattcagggttgatgatgtctcaagcaagagcttt 35926060

                   
Query: 100      aag 102
                |||
Sbjct: 35926061 aag 35926063
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>gb|AC096690.5| Oryza sativa chromosome 3 BAC OSJNBa0059G06 genomic sequence, complete
             sequence
          Length = 145115

 Score =  331 bits (167), Expect = 1e-87
 Identities = 263/295 (89%)
 Strand = Plus / Minus

                                                                         
Query: 103   attctgaagataaacttgcctgctggggcacatcccactgccatcgcttactcagaaggg 162
             ||||||| ||| |||||||| |||||||||||||| || || || |||| |||| |||||
Sbjct: 34976 attctgaggatcaacttgcccgctggggcacatcctacagctattgctttctcacaaggg 34917

                                                                         
Query: 163   gcatcatccgttgttgtggcagcacaggcgctgttaggctcgtcgctctacatgtatgcg 222
             |||||||| |||||||||||||| || || || |||||||| || |||||||||||||||
Sbjct: 34916 gcatcatcagttgttgtggcagcgcaagcacttttaggctcatctctctacatgtatgcg 34857

                                                                         
Query: 223   gatgttggtgctcctccaactgggggaaacaaacagcagggcaagctttctcctcctgag 282
             |||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 34856 gatgttggtgctcctccagctggcggaaacaaacagcagggcaagctttctccccctgag 34797

                                                                         
Query: 283   atcaagtgggatcacaaaaagattcatggcaaggaatcagtgctgaaccttgcggcagct 342
             || |||||||| |||   |||||||| |||||||| ||||||||||| ||||||||||||
Sbjct: 34796 ataaagtgggaacaccgtaagattcacggcaaggagtcagtgctgaatcttgcggcagct 34737

                                                                    
Query: 343   cgtgcgactcatgggactggtgatgggagcacaatagtgatttcttgctctgaag 397
             ||||| ||  |||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 34736 cgtgcaacctatgggactggtgatggcagcacaatattgatttcttgctctgaag 34682



 Score =  167 bits (84), Expect = 5e-38
 Identities = 129/144 (89%)
 Strand = Plus / Minus

                                                                         
Query: 396   agcaactgatatcaaaatatggcatggaaagagtggcaaagagttgggaacagttgacac 455
             |||||||||||||||||| |||||||| || ||||| || |||||||||||||| |||||
Sbjct: 34603 agcaactgatatcaaaatttggcatgggaaaagtggaaaggagttgggaacagtcgacac 34544

                                                                         
Query: 456   taatcagttaaaaaacaatatggctgacatatccccaaatggccgcttcattgctgctgc 515
              ||||| || ||||| ||||||||||| ||||||||||||||||| ||||| ||||||||
Sbjct: 34543 caatcaattgaaaaataatatggctgatatatccccaaatggccgtttcatagctgctgc 34484

                                     
Query: 516   agctttcacagctgatgttaaggt 539
             |||||| ||||||||||| |||||
Sbjct: 34483 agcttttacagctgatgtcaaggt 34460



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 55/63 (87%)
 Strand = Plus / Minus

                                                                         
Query: 40    gtatgcgcggatggggttgtgagagtattcaggatcgatgatgcgtcaagcaagagcttt 99
             ||||| |||||||| | ||| |||||||||||| | |||||||  |||||||||||||||
Sbjct: 35124 gtatgtgcggatggagctgtcagagtattcagggttgatgatgtctcaagcaagagcttt 35065

                
Query: 100   aag 102
             |||
Sbjct: 35064 aag 35062
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  331 bits (167), Expect = 1e-87
 Identities = 263/295 (89%)
 Strand = Plus / Plus

                                                                            
Query: 103      attctgaagataaacttgcctgctggggcacatcccactgccatcgcttactcagaaggg 162
                ||||||| ||| |||||||| |||||||||||||| || || || |||| |||| |||||
Sbjct: 36016279 attctgaggatcaacttgcccgctggggcacatcctacagctattgctttctcacaaggg 36016338

                                                                            
Query: 163      gcatcatccgttgttgtggcagcacaggcgctgttaggctcgtcgctctacatgtatgcg 222
                |||||||| |||||||||||||| || || || |||||||| || |||||||||||||||
Sbjct: 36016339 gcatcatcagttgttgtggcagcgcaagcacttttaggctcatctctctacatgtatgcg 36016398

                                                                            
Query: 223      gatgttggtgctcctccaactgggggaaacaaacagcagggcaagctttctcctcctgag 282
                |||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 36016399 gatgttggtgctcctccagctggcggaaacaaacagcagggcaagctttctccccctgag 36016458

                                                                            
Query: 283      atcaagtgggatcacaaaaagattcatggcaaggaatcagtgctgaaccttgcggcagct 342
                || |||||||| |||   |||||||| |||||||| ||||||||||| ||||||||||||
Sbjct: 36016459 ataaagtgggaacaccgtaagattcacggcaaggagtcagtgctgaatcttgcggcagct 36016518

                                                                       
Query: 343      cgtgcgactcatgggactggtgatgggagcacaatagtgatttcttgctctgaag 397
                ||||| ||  |||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 36016519 cgtgcaacctatgggactggtgatggcagcacaatattgatttcttgctctgaag 36016573



 Score =  167 bits (84), Expect = 5e-38
 Identities = 129/144 (89%)
 Strand = Plus / Plus

                                                                            
Query: 396      agcaactgatatcaaaatatggcatggaaagagtggcaaagagttgggaacagttgacac 455
                |||||||||||||||||| |||||||| || ||||| || |||||||||||||| |||||
Sbjct: 36016652 agcaactgatatcaaaatttggcatgggaaaagtggaaaggagttgggaacagtcgacac 36016711

                                                                            
Query: 456      taatcagttaaaaaacaatatggctgacatatccccaaatggccgcttcattgctgctgc 515
                 ||||| || ||||| ||||||||||| ||||||||||||||||| ||||| ||||||||
Sbjct: 36016712 caatcaattgaaaaataatatggctgatatatccccaaatggccgtttcatagctgctgc 36016771

                                        
Query: 516      agctttcacagctgatgttaaggt 539
                |||||| ||||||||||| |||||
Sbjct: 36016772 agcttttacagctgatgtcaaggt 36016795



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 55/63 (87%)
 Strand = Plus / Plus

                                                                            
Query: 40       gtatgcgcggatggggttgtgagagtattcaggatcgatgatgcgtcaagcaagagcttt 99
                ||||| |||||||| | ||| |||||||||||| | |||||||  |||||||||||||||
Sbjct: 36016131 gtatgtgcggatggagctgtcagagtattcagggttgatgatgtctcaagcaagagcttt 36016190

                   
Query: 100      aag 102
                |||
Sbjct: 36016191 aag 36016193
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>gb|BT019136.1| Zea mays clone Contig775.F mRNA sequence
          Length = 960

 Score =  196 bits (99), Expect = 5e-47
 Identities = 150/167 (89%)
 Strand = Plus / Plus

                                                                       
Query: 382 atttcttgctctgaagcaactgatatcaaaatatggcatggaaagagtggcaaagagttg 441
           ||||| ||||| |||||||||||||||||| | |||||||| |||||||| || ||||| 
Sbjct: 8   atttcatgctcagaagcaactgatatcaaagtttggcatgggaagagtgggaaggagttt 67

                                                                       
Query: 442 ggaacagttgacactaatcagttaaaaaacaatatggctgacatatccccaaatggccgc 501
           || ||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 68  ggtacagttgacaccaatcagttaaaaaataatatggctgacatatccccaaatggtcgc 127

                                                          
Query: 502 ttcattgctgctgcagctttcacagctgatgttaaggtgtgggagat 548
           ||||| |||||||| ||||| || |||||||| ||||||||||||||
Sbjct: 128 ttcatagctgctgcggcttttactgctgatgtcaaggtgtgggagat 174
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>gb|AC108433.9| Mus musculus chromosome 18, clone RP23-194M19, complete sequence
          Length = 188997

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 112    ataaacttgcctgctggggca 132
              |||||||||||||||||||||
Sbjct: 138021 ataaacttgcctgctggggca 138001
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>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 328     aaccttgcggcagctcgtgcg 348
               |||||||||||||||||||||
Sbjct: 3396755 aaccttgcggcagctcgtgcg 3396775
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>emb|AL035419.12|HS1100H13 Human DNA sequence from clone RP5-1100H13 on chromosome 20q11.2 Contains
              the 3' end of the gene for a novel protein (KIAA1219), a
              novel gene, a HSPC037 pseudogene, the C20orf95 gene for a
              novel RhoGAP domain-containing protein and two CpG islands,
              complete sequence
          Length = 116792

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 418    catggaaagagtggcaaagagttgg 442
              ||||||| |||||||||||||||||
Sbjct: 101532 catggaaggagtggcaaagagttgg 101508
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>gb|AC114550.4| Homo sapiens chromosome 8, clone CTD-3023L14, complete sequence
          Length = 159903

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 87    aagcaagagctttaagattct 107
             |||||||||||||||||||||
Sbjct: 58499 aagcaagagctttaagattct 58519
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>gb|AC160128.2| Mus musculus BAC clone RP23-286G17 from chromosome 12, complete sequence
          Length = 202315

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 305    ttcatggcaaggaatcagtgctgaa 329
              ||||||||||||||| |||||||||
Sbjct: 170157 ttcatggcaaggaatgagtgctgaa 170133
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>gb|AC155808.2| Mus musculus BAC clone RP24-267H3 from 12, complete sequence
          Length = 184888

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 305    ttcatggcaaggaatcagtgctgaa 329
              ||||||||||||||| |||||||||
Sbjct: 127919 ttcatggcaaggaatgagtgctgaa 127943
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>ref|NM_177329.2| Mus musculus RIKEN cDNA A530053G22 gene (A530053G22Rik), mRNA
          Length = 1528

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 269 tttctcctcctgagatcaag 288
           ||||||||||||||||||||
Sbjct: 506 tttctcctcctgagatcaag 487
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>gb|AC134470.5| Mus musculus BAC clone RP23-120K22 from chromosome 14, complete sequence
          Length = 211779

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 454    actaatcagttaaaaaacaa 473
              ||||||||||||||||||||
Sbjct: 206343 actaatcagttaaaaaacaa 206362
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>gb|AC113983.13| Mus musculus chromosome 5, clone RP24-95M11, complete sequence
          Length = 198590

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 447    agttgacactaatcagttaa 466
              ||||||||||||||||||||
Sbjct: 109796 agttgacactaatcagttaa 109815
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>gb|AC009395.7| Drosophila melanogaster clone BACR01D01, complete sequence
          Length = 189116

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 178    gtggcagcacaggcgctgtt 197
              ||||||||||||||||||||
Sbjct: 127136 gtggcagcacaggcgctgtt 127155
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>gb|AC120418.10| Mus musculus chromosome 6, clone RP24-474I24, complete sequence
          Length = 177307

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 269   tttctcctcctgagatcaag 288
             ||||||||||||||||||||
Sbjct: 65104 tttctcctcctgagatcaag 65085
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>gb|AF178030.3| Homo sapiens chromosome 8 multiple clones map q23.3, complete sequence
          Length = 310003

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 118    ttgcctgctggggcacatcc 137
              ||||||||||||||||||||
Sbjct: 254705 ttgcctgctggggcacatcc 254686
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>emb|CR759945.8| Zebrafish DNA sequence from clone CH211-167E4 in linkage group 13,
              complete sequence
          Length = 146960

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 396    agcaactgatatcaaaatat 415
              ||||||||||||||||||||
Sbjct: 144777 agcaactgatatcaaaatat 144758
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>gb|AC104889.10| Mus musculus chromosome 5, clone RP23-201D22, complete sequence
          Length = 196086

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 119   tgcctgctggggcacatccc 138
             ||||||||||||||||||||
Sbjct: 37202 tgcctgctggggcacatccc 37221
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>ref|NM_169826.1| Drosophila melanogaster CG31224-RA (CG31224), mRNA
          Length = 7059

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 178  gtggcagcacaggcgctgtt 197
            ||||||||||||||||||||
Sbjct: 1006 gtggcagcacaggcgctgtt 987
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>gb|AC105389.3| Homo sapiens BAC clone RP11-227F19 from 4, complete sequence
          Length = 187067

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 447    agttgacactaatcagttaa 466
              ||||||||||||||||||||
Sbjct: 142651 agttgacactaatcagttaa 142632
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>gb|AY075377.1| Drosophila melanogaster LD06123 full length cDNA
          Length = 3188

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 178  gtggcagcacaggcgctgtt 197
            ||||||||||||||||||||
Sbjct: 1006 gtggcagcacaggcgctgtt 987
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>dbj|AK080052.1| Mus musculus adult male aorta and vein cDNA, RIKEN full-length
           enriched library, clone:A530053G22 product:Hypothetical
           Lipocalins structure containing protein, full insert
           sequence
          Length = 1528

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 269 tttctcctcctgagatcaag 288
           ||||||||||||||||||||
Sbjct: 506 tttctcctcctgagatcaag 487
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>dbj|AK079908.1| Mus musculus adult male aorta and vein cDNA, RIKEN full-length
           enriched library, clone:A530001F19
           product:unclassifiable, full insert sequence
          Length = 611

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 269 tttctcctcctgagatcaag 288
           ||||||||||||||||||||
Sbjct: 408 tttctcctcctgagatcaag 389
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>gb|BC051224.1| Mus musculus RIKEN cDNA A530053G22 gene, mRNA (cDNA clone MGC:63091
           IMAGE:3373233), complete cds
          Length = 643

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 269 tttctcctcctgagatcaag 288
           ||||||||||||||||||||
Sbjct: 422 tttctcctcctgagatcaag 403
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 500     gcttcattgctgctgcagct 519
               ||||||||||||||||||||
Sbjct: 4623482 gcttcattgctgctgcagct 4623463
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>gb|AC007812.6|AC007812 Drosophila melanogaster, chromosome 3R, region 91C-91C, BAC clone
             BACR01F15, complete sequence
          Length = 186989

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 178   gtggcagcacaggcgctgtt 197
             ||||||||||||||||||||
Sbjct: 37419 gtggcagcacaggcgctgtt 37438
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>gb|AC154657.2| Mus musculus BAC clone RP24-269C17 from chromosome 14, complete sequence
          Length = 156881

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 454    actaatcagttaaaaaacaa 473
              ||||||||||||||||||||
Sbjct: 119008 actaatcagttaaaaaacaa 118989
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>gb|AC025041.7|AC025041 Homo sapiens chromosome 15 clone RP11-316P21 map 15q21.2, complete
             sequence
          Length = 173387

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 522   cacagctgatgttaaggtgt 541
             ||||||||||||||||||||
Sbjct: 48110 cacagctgatgttaaggtgt 48129
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>gb|AC016912.7| Homo sapiens BAC clone RP11-480A6 from 2, complete sequence
          Length = 143996

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 424   aagagtggcaaagagttggg 443
             ||||||||||||||||||||
Sbjct: 38590 aagagtggcaaagagttggg 38571
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>ref|XM_575753.1| PREDICTED: Rattus norvegicus similar to syntrophin, gamma 1
           (LOC500394), mRNA
          Length = 1773

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 435 agagttgggaacagttgacactaatcag 462
           ||||||||  ||||||||||||||||||
Sbjct: 414 agagttggacacagttgacactaatcag 441
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>dbj|AP003878.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1120_C08
          Length = 150300

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 500    gcttcattgctgctgcagct 519
              ||||||||||||||||||||
Sbjct: 147330 gcttcattgctgctgcagct 147311
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>dbj|AP004590.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0577G06
          Length = 58137

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 500   gcttcattgctgctgcagct 519
             ||||||||||||||||||||
Sbjct: 37987 gcttcattgctgctgcagct 37968
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>emb|Z69996.1|TLPCB7 T.ledebourii mRNA for In-2-like dormancy related protein
          Length = 656

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 218 atgcggatgttggtgctcct 237
           ||||||||||||||||||||
Sbjct: 155 atgcggatgttggtgctcct 174
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>gb|AE003723.5| Drosophila melanogaster chromosome 3R, section 61 of 118 of the
             complete sequence
          Length = 255619

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 178   gtggcagcacaggcgctgtt 197
             ||||||||||||||||||||
Sbjct: 50164 gtggcagcacaggcgctgtt 50183
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>emb|BX088726.13| Zebrafish DNA sequence from clone DKEY-149G13 in linkage group 20,
              complete sequence
          Length = 190374

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 396    agcaactgatatcaaaatat 415
              ||||||||||||||||||||
Sbjct: 182914 agcaactgatatcaaaatat 182933
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>gb|AC153617.3| Mus musculus 6 BAC RP23-177G20 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 199525

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 269    tttctcctcctgagatcaag 288
              ||||||||||||||||||||
Sbjct: 132851 tttctcctcctgagatcaag 132870



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 269  tttctcctcctgagatcaag 288
            ||||||||||||||||||||
Sbjct: 9977 tttctcctcctgagatcaag 9996
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>gb|AC147973.3| Gallus gallus BAC clone CH261-44G9 from chromosome unknown, complete
             sequence
          Length = 196590

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 239   caactgggggaaacaaacag 258
             ||||||||||||||||||||
Sbjct: 66630 caactgggggaaacaaacag 66611
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>gb|AC102620.11| Mus musculus chromosome 5, clone RP23-429E19, complete sequence
          Length = 208435

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 119    tgcctgctggggcacatccc 138
              ||||||||||||||||||||
Sbjct: 199855 tgcctgctggggcacatccc 199874
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>emb|AL845280.4| Mouse DNA sequence from clone RP23-265L1 on chromosome X, complete
             sequence
          Length = 142846

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 396   agcaactgatatcaaaatat 415
             ||||||||||||||||||||
Sbjct: 43791 agcaactgatatcaaaatat 43810


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,912,104
Number of Sequences: 3902068
Number of extensions: 4912104
Number of successful extensions: 91082
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 90947
Number of HSP's gapped (non-prelim): 134
length of query: 549
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 526
effective length of database: 17,143,297,704
effective search space: 9017374592304
effective search space used: 9017374592304
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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