ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal37a20
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AY109993.1| Zea mays CL16286_1 mRNA sequence 274 3e-70
2ref|XM_474223.1| Oryza sativa (japonica cultivar-group), predic... 244 2e-61
3emb|AL606999.3|OSJN00127 Oryza sativa genomic DNA, chromosome 4,... 101 2e-18
4dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 101 2e-18
5dbj|AK109706.1| Oryza sativa (japonica cultivar-group) cDNA clon... 101 2e-18
6gb|BT018698.1| Zea mays clone EL01N0514C09.d mRNA sequence 82 2e-12
7gb|DQ415920.1| Cleome spinosa clone BAC Cs3, complete sequence 68 3e-08
8ref|XM_236276.3| PREDICTED: Rattus norvegicus similar to RIKEN c... 44 0.45
9dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 42 1.8
10emb|AL607088.26| Mouse DNA sequence from clone RP23-13A13 on chr... 42 1.8
11gb|AE006109.1| Pasteurella multocida subsp. multocida str. Pm70 ... 40 7.0
12gb|AC140465.2| Mus musculus BAC clone RP24-389J3 from chromosome... 40 7.0
13gb|AC089993.2| Bos taurus clone RP42-553M7, complete sequence 40 7.0
14gb|DP000008.1| Bos taurus target 1 genomic scaffold 40 7.0
15gb|AC122241.4| Mus musculus BAC clone RP23-146M20 from chromosom... 40 7.0
16gb|AC117197.3| Mus musculus BAC clone RP23-127A21 from 16, compl... 40 7.0
17emb|AL353900.14| Human DNA sequence from clone RP11-202C2 on chr... 40 7.0
18emb|AL031121.5|HS495O10 Human DNA sequence from clone RP3-495O10... 40 7.0
19emb|BX045529.1|CNS097AL Single read from an extremity of a full-... 40 7.0
20gb|AC166356.1| Mus musculus BAC clone RP23-410F8 from chromosome... 40 7.0
21emb|AL672030.10| Mouse DNA sequence from clone RP23-199E12 on ch... 40 7.0
22emb|CR389704.1| Gallus gallus finished cDNA, clone ChEST492l23 40 7.0
23gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 40 7.0
24gb|AC153377.5| Mus musculus 6 BAC RP23-380O16 (Roswell Park Canc... 40 7.0
25gb|AC113368.3| Homo sapiens chromosome 5 clone RP11-116B13, comp... 40 7.0
26ref|XM_316402.2| Anopheles gambiae str. PEST ENSANGP00000013047 ... 40 7.0
27gb|AF111202.1|AF111202 Chlamydia pecorum strain FcStra 3-deoxy-D... 40 7.0
28emb|AL049839.3|CNS0000J Human chromosome 14 DNA sequence BAC R-9... 40 7.0
29emb|BX629356.1|CNS09SBW Tetraodon nigroviridis BAC sequence 40 7.0
30dbj|AP006148.1| Lotus japonicus genomic DNA, chromosome 2, clone... 40 7.0

>gb|AY109993.1| Zea mays CL16286_1 mRNA sequence
          Length = 967

 Score =  274 bits (138), Expect = 3e-70
 Identities = 243/278 (87%)
 Strand = Plus / Plus

                                                                       
Query: 240 cgtcacgcagcgctacagcctcgtcgacagggacgactacaagaagtacaacgggatttg 299
           |||||| ||||||||| ||||||| || ||||||||||||||||||||||| ||||| ||
Sbjct: 276 cgtcacacagcgctaccgcctcgtggagagggacgactacaagaagtacaatgggatatg 335

                                                                       
Query: 300 cctgatgtcgcagaagctcgtgaacatcataaagcagatggatcccagggaccctttcag 359
           | | |||  ||| |||||||| ||||||||||| |||||||| || || |||||||||||
Sbjct: 336 cttaatggtgcaaaagctcgttaacatcataaaccagatggacccaagagaccctttcag 395

                                                                       
Query: 360 aatcgagatgacaggcatgctgctcgataagctgtataatatgggtgtaattccaacaaa 419
           |||| ||||||||| | || | |||||||||||||||||||||||||||||| |||||||
Sbjct: 396 aatccagatgacagacttgattctcgataagctgtataatatgggtgtaatttcaacaaa 455

                                                                       
Query: 420 gaagagcttggttaaatgcgagagactttcagtgagcgctttcgccaggcggagacttgc 479
             |||||||| | || || |||| ||||||||||||||| |||  |||||||||||||||
Sbjct: 456 agagagcttgttaaagtgtgagaaactttcagtgagcgccttctgcaggcggagacttgc 515

                                                 
Query: 480 aacaattatggtgaagctcaagtttgctgaacacctta 517
           |||| |||||||||||||||||||||| || |||||||
Sbjct: 516 aacagttatggtgaagctcaagtttgcagagcacctta 553



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 150 gatgaggaagctcaagttccatgag 174
           |||||||||||||||||||||||||
Sbjct: 186 gatgaggaagctcaagttccatgag 210



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>ref|XM_474223.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 549

 Score =  244 bits (123), Expect = 2e-61
 Identities = 306/367 (83%)
 Strand = Plus / Plus

                                                                       
Query: 151 atgaggaagctcaagttccatgagaggaagctgctgaagaagaccaacttcctcctgtgg 210
           ||||||||||||| |||||| |||  |||||| || ||||||||||||||||||   |  
Sbjct: 1   atgaggaagctcaggttccacgagcagaagctactcaagaagaccaacttcctcgacttc 60

                                                                       
Query: 211 aagcgggagggcggccaccgcgaggccgccgtcacgcagcgctacagcctcgtcgacagg 270
           ||| |||||   ||||||||||| |||  ||||||||||||||||  ||||||||| || 
Sbjct: 61  aagagggagaaaggccaccgcgacgccatcgtcacgcagcgctacctcctcgtcgagaga 120

                                                                       
Query: 271 gacgactacaagaagtacaacgggatttgcctgatgtcgcagaagctcgtgaacatcata 330
           |||||||||||||||||||| || || |||||||||  ||| |||||||| ||||| |||
Sbjct: 121 gacgactacaagaagtacaatggcatatgcctgatggtgcaaaagctcgtcaacattata 180

                                                                       
Query: 331 aagcagatggatcccagggaccctttcagaatcgagatgacaggcatgctgctcgataag 390
           ||||| ||||| || || ||||||| ||||   |||||||||| |||| |||||||||||
Sbjct: 181 aagcaaatggacccgagagacccttacagagcggagatgacagacatgttgctcgataag 240

                                                                       
Query: 391 ctgtataatatgggtgtaattccaacaaagaagagcttggttaaatgcgagagactttca 450
           ||||| || |||||||||||||||||||| |||||| || | | ||| || | |||||||
Sbjct: 241 ctgtacaacatgggtgtaattccaacaaaaaagagcctgttaacatgtgaaaaactttca 300

                                                                       
Query: 451 gtgagcgctttcgccaggcggagacttgcaacaattatggtgaagctcaagtttgctgaa 510
           |||||| | ||   ||||||||| ||||||||| | ||||||||||||||||| || || 
Sbjct: 301 gtgagctccttttgcaggcggaggcttgcaacagtcatggtgaagctcaagttcgcggag 360

                  
Query: 511 cacctta 517
           |||||||
Sbjct: 361 cacctta 367



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>emb|AL606999.3|OSJN00127 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K01,
             complete sequence
          Length = 163448

 Score =  101 bits (51), Expect = 2e-18
 Identities = 117/139 (84%)
 Strand = Plus / Minus

                                                                         
Query: 150   gatgaggaagctcaagttccatgagaggaagctgctgaagaagaccaacttcctcctgtg 209
             |||||||||||||| |||||| |||  |||||| || ||||||||||||||||||   | 
Sbjct: 31928 gatgaggaagctcaggttccacgagcagaagctactcaagaagaccaacttcctcgactt 31869

                                                                         
Query: 210   gaagcgggagggcggccaccgcgaggccgccgtcacgcagcgctacagcctcgtcgacag 269
              ||| |||||   ||||||||||| |||  ||||||||||||||||  ||||||||| ||
Sbjct: 31868 caagagggagaaaggccaccgcgacgccatcgtcacgcagcgctacctcctcgtcgagag 31809

                                
Query: 270   ggacgactacaagaagtac 288
              ||||||||||||||||||
Sbjct: 31808 agacgactacaagaagtac 31790



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 93/111 (83%)
 Strand = Plus / Minus

                                                                         
Query: 285   gtacaacgggatttgcctgatgtcgcagaagctcgtgaacatcataaagcagatggatcc 344
             |||||| || || |||||||||  ||| |||||||| ||||| |||||||| ||||| ||
Sbjct: 31642 gtacaatggcatatgcctgatggtgcaaaagctcgtcaacattataaagcaaatggaccc 31583

                                                                
Query: 345   cagggaccctttcagaatcgagatgacaggcatgctgctcgataagctgta 395
              || ||||||| ||||   |||||||||| |||| ||||||||||||||||
Sbjct: 31582 gagagacccttacagagcggagatgacagacatgttgctcgataagctgta 31532



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                  
Query: 465   caggcggagacttgcaacaattatggtgaagctcaagtttgctgaacacctta 517
             ||||||||| ||||||||| | ||||||||||||||||| || || |||||||
Sbjct: 30527 caggcggaggcttgcaacagtcatggtgaagctcaagttcgcggagcacctta 30475



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                      
Query: 400   atgggtgtaattccaacaaagaagagcttggttaaatgcgagagactttcagtgagc 456
             |||||||||||||||||||| |||||| || | | ||| || | |||||||||||||
Sbjct: 30881 atgggtgtaattccaacaaaaaagagcctgttaacatgtgaaaaactttcagtgagc 30825



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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  101 bits (51), Expect = 2e-18
 Identities = 117/139 (84%)
 Strand = Plus / Minus

                                                                            
Query: 150      gatgaggaagctcaagttccatgagaggaagctgctgaagaagaccaacttcctcctgtg 209
                |||||||||||||| |||||| |||  |||||| || ||||||||||||||||||   | 
Sbjct: 33820029 gatgaggaagctcaggttccacgagcagaagctactcaagaagaccaacttcctcgactt 33819970

                                                                            
Query: 210      gaagcgggagggcggccaccgcgaggccgccgtcacgcagcgctacagcctcgtcgacag 269
                 ||| |||||   ||||||||||| |||  ||||||||||||||||  ||||||||| ||
Sbjct: 33819969 caagagggagaaaggccaccgcgacgccatcgtcacgcagcgctacctcctcgtcgagag 33819910

                                   
Query: 270      ggacgactacaagaagtac 288
                 ||||||||||||||||||
Sbjct: 33819909 agacgactacaagaagtac 33819891



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 93/111 (83%)
 Strand = Plus / Minus

                                                                            
Query: 285      gtacaacgggatttgcctgatgtcgcagaagctcgtgaacatcataaagcagatggatcc 344
                |||||| || || |||||||||  ||| |||||||| ||||| |||||||| ||||| ||
Sbjct: 33819743 gtacaatggcatatgcctgatggtgcaaaagctcgtcaacattataaagcaaatggaccc 33819684

                                                                   
Query: 345      cagggaccctttcagaatcgagatgacaggcatgctgctcgataagctgta 395
                 || ||||||| ||||   |||||||||| |||| ||||||||||||||||
Sbjct: 33819683 gagagacccttacagagcggagatgacagacatgttgctcgataagctgta 33819633



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                     
Query: 465      caggcggagacttgcaacaattatggtgaagctcaagtttgctgaacacctta 517
                ||||||||| ||||||||| | ||||||||||||||||| || || |||||||
Sbjct: 33818628 caggcggaggcttgcaacagtcatggtgaagctcaagttcgcggagcacctta 33818576



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                         
Query: 400      atgggtgtaattccaacaaagaagagcttggttaaatgcgagagactttcagtgagc 456
                |||||||||||||||||||| |||||| || | | ||| || | |||||||||||||
Sbjct: 33818982 atgggtgtaattccaacaaaaaagagcctgttaacatgtgaaaaactttcagtgagc 33818926



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>dbj|AK109706.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-145-G05, full
           insert sequence
          Length = 1933

 Score =  101 bits (51), Expect = 2e-18
 Identities = 117/139 (84%)
 Strand = Plus / Plus

                                                                       
Query: 150 gatgaggaagctcaagttccatgagaggaagctgctgaagaagaccaacttcctcctgtg 209
           |||||||||||||| |||||| |||  |||||| || ||||||||||||||||||   | 
Sbjct: 98  gatgaggaagctcaggttccacgagcagaagctactcaagaagaccaacttcctcgactt 157

                                                                       
Query: 210 gaagcgggagggcggccaccgcgaggccgccgtcacgcagcgctacagcctcgtcgacag 269
            ||| |||||   ||||||||||| |||  ||||||||||||||||  ||||||||| ||
Sbjct: 158 caagagggagaaaggccaccgcgacgccatcgtcacgcagcgctacctcctcgtcgagag 217

                              
Query: 270 ggacgactacaagaagtac 288
            ||||||||||||||||||
Sbjct: 218 agacgactacaagaagtac 236



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 93/111 (83%)
 Strand = Plus / Plus

                                                                       
Query: 285 gtacaacgggatttgcctgatgtcgcagaagctcgtgaacatcataaagcagatggatcc 344
           |||||| || || |||||||||  ||| |||||||| ||||| |||||||| ||||| ||
Sbjct: 384 gtacaatggcatatgcctgatggtgcaaaagctcgtcaacattataaagcaaatggaccc 443

                                                              
Query: 345 cagggaccctttcagaatcgagatgacaggcatgctgctcgataagctgta 395
            || ||||||| ||||   |||||||||| |||| ||||||||||||||||
Sbjct: 444 gagagacccttacagagcggagatgacagacatgttgctcgataagctgta 494



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                 
Query: 465  caggcggagacttgcaacaattatggtgaagctcaagtttgctgaacacctta 517
            ||||||||| ||||||||| | ||||||||||||||||| || || |||||||
Sbjct: 1499 caggcggaggcttgcaacagtcatggtgaagctcaagttcgcggagcacctta 1551



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                     
Query: 400  atgggtgtaattccaacaaagaagagcttggttaaatgcgagagactttcagtgagc 456
            |||||||||||||||||||| |||||| || | | ||| || | |||||||||||||
Sbjct: 1145 atgggtgtaattccaacaaaaaagagcctgttaacatgtgaaaaactttcagtgagc 1201



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>gb|BT018698.1| Zea mays clone EL01N0514C09.d mRNA sequence
          Length = 1736

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 50/53 (94%)
 Strand = Plus / Plus

                                                                 
Query: 465  caggcggagacttgcaacaattatggtgaagctcaagtttgctgaacacctta 517
            ||||||||||||||||||| |||||||||||||||||||||| || |||||||
Sbjct: 1266 caggcggagacttgcaacagttatggtgaagctcaagtttgcagagcacctta 1318



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 58/66 (87%)
 Strand = Plus / Plus

                                                                        
Query: 393  gtataatatgggtgtaattccaacaaagaagagcttggttaaatgcgagagactttcagt 452
            ||||||||||||||||||| |||||||  |||||||| | || || |||| |||||||||
Sbjct: 949  gtataatatgggtgtaatttcaacaaaagagagcttgttaaagtgtgagaaactttcagt 1008

                  
Query: 453  gagcgc 458
            ||||||
Sbjct: 1009 gagcgc 1014



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>gb|DQ415920.1| Cleome spinosa clone BAC Cs3, complete sequence
          Length = 141360

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 40/42 (95%)
 Strand = Plus / Plus

                                                       
Query: 150   gatgaggaagctcaagttccatgagaggaagctgctgaagaa 191
             |||||||||||||||||||||||||| |||||| ||||||||
Sbjct: 38755 gatgaggaagctcaagttccatgagaagaagcttctgaagaa 38796



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>ref|XM_236276.3| PREDICTED: Rattus norvegicus similar to RIKEN cDNA 1190002L16
           (predicted) (LOC315697), mRNA
          Length = 1070

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 155 ggaagctcaagttccatgagaggaagctgctgaa 188
           ||||||| ||||||||||||  ||||||||||||
Sbjct: 197 ggaagcttaagttccatgagcagaagctgctgaa 230



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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 452     tgagcgctttcgccaggcgga 472
               |||||||||||||||||||||
Sbjct: 1320095 tgagcgctttcgccaggcgga 1320115



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>emb|AL607088.26| Mouse DNA sequence from clone RP23-13A13 on chromosome 4, complete
            sequence
          Length = 103925

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 31/33 (93%), Gaps = 1/33 (3%)
 Strand = Plus / Plus

                                             
Query: 150  gatgaggaagctcaag-ttccatgagaggaagc 181
            |||||||||||||||| ||||| ||||||||||
Sbjct: 9808 gatgaggaagctcaagtttccaagagaggaagc 9840



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>gb|AE006109.1| Pasteurella multocida subsp. multocida str. Pm70 section 76 of 204
           of the complete genome
          Length = 13603

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 307 tcgcagaagctcgtgaacat 326
           ||||||||||||||||||||
Sbjct: 615 tcgcagaagctcgtgaacat 596



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>gb|AC140465.2| Mus musculus BAC clone RP24-389J3 from chromosome 16, complete sequence
          Length = 189550

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 12    ccactcatctccctgccccc 31
             ||||||||||||||||||||
Sbjct: 13877 ccactcatctccctgccccc 13858



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>gb|AC089993.2| Bos taurus clone RP42-553M7, complete sequence
          Length = 162859

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 169   catgagaggaagctgctgaagaag 192
             |||||||||||||| |||||||||
Sbjct: 33113 catgagaggaagcttctgaagaag 33090



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>gb|DP000008.1| Bos taurus target 1 genomic scaffold
          Length = 2072671

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 169     catgagaggaagctgctgaagaag 192
               |||||||||||||| |||||||||
Sbjct: 1399619 catgagaggaagcttctgaagaag 1399596



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>gb|AC122241.4| Mus musculus BAC clone RP23-146M20 from chromosome 15, complete
            sequence
          Length = 195429

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 11   tccactcatctccctgcccc 30
            ||||||||||||||||||||
Sbjct: 6626 tccactcatctccctgcccc 6607



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>gb|AC117197.3| Mus musculus BAC clone RP23-127A21 from 16, complete sequence
          Length = 211410

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 12   ccactcatctccctgccccc 31
            ||||||||||||||||||||
Sbjct: 3474 ccactcatctccctgccccc 3493



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>emb|AL353900.14| Human DNA sequence from clone RP11-202C2 on chromosome 10 Contains part
             of the gene for VPS10 domain receptor protein SORCS 3
             (SORCS3), complete sequence
          Length = 158737

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 11    tccactcatctccctgcccc 30
             ||||||||||||||||||||
Sbjct: 10356 tccactcatctccctgcccc 10337



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>emb|AL031121.5|HS495O10 Human DNA sequence from clone RP3-495O10 on chromosome 6q26-27 Contains
             an RPL37A (60S Ribosomal Protein L37A) pseudogene and the
             3' end of the gene for a novel protein (FLJ32724),
             complete sequence
          Length = 187908

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 74    ctcctccaggaacctccacccccg 97
             ||||||||||| ||||||||||||
Sbjct: 27857 ctcctccaggagcctccacccccg 27880



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>emb|BX045529.1|CNS097AL Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAC19DA01 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 806

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 157 aagctcaagttccatgagaggaagctgctgaagaag 192
           ||||| |||||||| |||  ||||||||||||||||
Sbjct: 558 aagctaaagttccacgagcagaagctgctgaagaag 523



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>gb|AC166356.1| Mus musculus BAC clone RP23-410F8 from chromosome 15, complete sequence
          Length = 165082

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 11    tccactcatctccctgcccc 30
             ||||||||||||||||||||
Sbjct: 45775 tccactcatctccctgcccc 45756



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>emb|AL672030.10| Mouse DNA sequence from clone RP23-199E12 on chromosome 11, complete
             sequence
          Length = 78258

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 186   gaagaagaccaacttcctcc 205
             ||||||||||||||||||||
Sbjct: 21160 gaagaagaccaacttcctcc 21141



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>emb|CR389704.1| Gallus gallus finished cDNA, clone ChEST492l23
          Length = 560

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 233 aggccgccgtcacgcagcgctaca 256
           |||||||||||||||||| |||||
Sbjct: 212 aggccgccgtcacgcagccctaca 235



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>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 26     gcccccgccggtctcgcgcc 45
              ||||||||||||||||||||
Sbjct: 304628 gcccccgccggtctcgcgcc 304647



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>gb|AC153377.5| Mus musculus 6 BAC RP23-380O16 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 195618

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 487   atggtgaagctcaagtttgc 506
             ||||||||||||||||||||
Sbjct: 51186 atggtgaagctcaagtttgc 51205



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>gb|AC113368.3| Homo sapiens chromosome 5 clone RP11-116B13, complete sequence
          Length = 155354

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 289   aacgggatttgcctgatgtc 308
             ||||||||||||||||||||
Sbjct: 17736 aacgggatttgcctgatgtc 17755



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>ref|XM_316402.2| Anopheles gambiae str. PEST ENSANGP00000013047
           (ENSANGG00000010558), mRNA
          Length = 748

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 157 aagctcaagttccatgagaggaagctgctgaagaag 192
           ||||| |||||||| |||  ||||||||||||||||
Sbjct: 193 aagctaaagttccacgagcagaagctgctgaagaag 228



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>gb|AF111202.1|AF111202 Chlamydia pecorum strain FcStra 3-deoxy-D-manno-2-octulosonic acid
           transferase (kdtA) gene, partial cds
          Length = 780

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 178 aagctgctgaagaagaccaa 197
           ||||||||||||||||||||
Sbjct: 768 aagctgctgaagaagaccaa 749



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>emb|AL049839.3|CNS0000J Human chromosome 14 DNA sequence BAC R-986E7 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 214527

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 149   tgatgaggaagctcaagttc 168
             ||||||||||||||||||||
Sbjct: 84620 tgatgaggaagctcaagttc 84639



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>emb|BX629356.1|CNS09SBW Tetraodon nigroviridis BAC sequence
          Length = 101385

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 73    gctcctccaggaacctccac 92
             ||||||||||||||||||||
Sbjct: 18798 gctcctccaggaacctccac 18779



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>dbj|AP006148.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT41D09, TM0304,
              complete sequence
          Length = 114776

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 320    tgaacatcataaagcagatg 339
              ||||||||||||||||||||
Sbjct: 103995 tgaacatcataaagcagatg 104014


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,922,276
Number of Sequences: 3902068
Number of extensions: 3922276
Number of successful extensions: 81202
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 81022
Number of HSP's gapped (non-prelim): 180
length of query: 517
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 494
effective length of database: 17,143,297,704
effective search space: 8468789065776
effective search space used: 8468789065776
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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