ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal36k23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1UCRI_MAIZE (P49727) Ubiquinol-cytochrome c reductase iron-sulfur... 194 1e-49
2UCRI_SOLTU (P37841) Ubiquinol-cytochrome c reductase iron-sulfur... 144 2e-34
3UCRI3_TOBAC (P51133) Ubiquinol-cytochrome c reductase iron-sulfu... 142 4e-34
4UCRI5_TOBAC (P51135) Ubiquinol-cytochrome c reductase iron-sulfu... 142 5e-34
5UCRI2_TOBAC (P51132) Ubiquinol-cytochrome c reductase iron-sulfu... 141 1e-33
6UCRI1_TOBAC (P49729) Ubiquinol-cytochrome c reductase iron-sulfu... 134 2e-31
7UCRI4_TOBAC (P51134) Ubiquinol-cytochrome c reductase iron-sulfu... 129 3e-30
8UCRI_NEUCR (P07056) Ubiquinol-cytochrome c reductase iron-sulfur... 33 0.43
9UCRI_YEAST (P08067) Ubiquinol-cytochrome c reductase iron-sulfur... 33 0.56
10UCRI_THEGE (Q69BK2) Ubiquinol-cytochrome c reductase iron-sulfur... 32 0.73
11UCRI_HYLSY (Q69BJ6) Ubiquinol-cytochrome c reductase iron-sulfur... 32 0.95
12UCRI_COLPO (Q69BK0) Ubiquinol-cytochrome c reductase iron-sulfur... 32 0.95
13UCRI_CERAE (Q69BK1) Ubiquinol-cytochrome c reductase iron-sulfur... 32 0.95
14UCRI_PANTR (Q69BK5) Ubiquinol-cytochrome c reductase iron-sulfur... 32 1.2
15UCRI_PANPA (Q69BK6) Ubiquinol-cytochrome c reductase iron-sulfur... 32 1.2
16UCRI_HUMAN (P47985) Ubiquinol-cytochrome c reductase iron-sulfur... 32 1.2
17UCRI_GORGO (Q69BK4) Ubiquinol-cytochrome c reductase iron-sulfur... 32 1.2
18KCAB1_RABIT (Q9XT31) Voltage-gated potassium channel beta-1 subu... 31 1.6
19KCAB1_HUMAN (Q14722) Voltage-gated potassium channel beta-1 subu... 31 1.6
20KCAB1_RAT (P63144) Voltage-gated potassium channel beta-1 subuni... 31 1.6
21KCAB1_MOUSE (P63143) Voltage-gated potassium channel beta-1 subu... 31 1.6
22KCAB1_CHICK (Q9PWR1) Voltage-gated potassium channel beta-1 subu... 31 1.6
23KCAB1_BOVIN (Q4PJK1) Voltage-gated potassium channel beta-1 subu... 31 1.6
24UCRI_PONPY (Q69BK3) Ubiquinol-cytochrome c reductase iron-sulfur... 31 1.6
25KCAB1_MUSPU (Q28528) Voltage-gated potassium channel beta-1 subu... 31 1.6
26UCRI_RAT (P20788) Ubiquinol-cytochrome c reductase iron-sulfur s... 30 2.8
27DPOE_EMENI (O93845) DNA polymerase epsilon, catalytic subunit A ... 30 2.8
28UCRI_MOUSE (Q9CR68) Ubiquinol-cytochrome c reductase iron-sulfur... 30 3.6
29UCRI_BOVIN (P13272) Ubiquinol-cytochrome c reductase iron-sulfur... 30 3.6
30UCRI_LAGLA (Q69BJ8) Ubiquinol-cytochrome c reductase iron-sulfur... 30 4.7
31MBHL_RHILV (P18636) Uptake hydrogenase large subunit (EC 1.12.99... 30 4.7
32SREC2_MOUSE (P59222) Scavenger receptor class F member 2 precurs... 29 6.2
33B2_DAUCA (P37707) B2 protein 29 6.2
34UCRI_SAISC (Q69BJ7) Ubiquinol-cytochrome c reductase iron-sulfur... 29 8.1
35UCRI_AOTAZ (Q69BJ9) Ubiquinol-cytochrome c reductase iron-sulfur... 29 8.1
36UCRI_SCHPO (Q09154) Ubiquinol-cytochrome c reductase iron-sulfur... 29 8.1 
>UCRI_MAIZE (P49727) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP)
          Length = 273

 Score =  194 bits (493), Expect = 1e-49
 Identities = 105/159 (66%), Positives = 122/159 (76%), Gaps = 5/159 (3%)
 Frame = +1

Query: 40  MLRVAGRRISSHLAWRPXXXXXXGRTPLVG-GLPGEDFPWDQN---PRFAIESPFYVAAR 207
           MLRVAGRR+SS L+WRP      G  PL G G+P  D    +    PRF+I+SPF+VA+R
Sbjct: 1   MLRVAGRRLSSSLSWRPAAAVARG--PLAGAGVPDRDDDSARGRSQPRFSIDSPFFVASR 58

Query: 208 GFSA-ESLVPRSQDVGLAELPATAAALKNPCAKIVYDEYNHKRYPPGDPSKRAFAYFVLS 384
           GFS+ E++VPR+QD GLA+LPAT AA+KNP  K+VYDEYNH+RYPPGDPSKRAFAYFVLS
Sbjct: 59  GFSSTETVVPRNQDAGLADLPATVAAVKNPNPKVVYDEYNHERYPPGDPSKRAFAYFVLS 118

Query: 385 GGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSS 501
           GGRF+YAS           SMSASKDVLALASLEVDLSS
Sbjct: 119 GGRFIYASLLRLLVLKFVLSMSASKDVLALASLEVDLSS 157
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>UCRI_SOLTU (P37841) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP)
          Length = 265

 Score =  144 bits (362), Expect = 2e-34
 Identities = 83/154 (53%), Positives = 100/154 (64%)
 Frame = +1

Query: 40  MLRVAGRRISSHLAWRPXXXXXXGRTPLVGGLPGEDFPWDQNPRFAIESPFYVAARGFSA 219
           MLRVAGRR+SS  A             +      +D    ++P  ++ S F    RGFS+
Sbjct: 1   MLRVAGRRLSSSAARSSSTFFTRSSFTVT-----DDSSPARSPSPSLTSSFLDQIRGFSS 55

Query: 220 ESLVPRSQDVGLAELPATAAALKNPCAKIVYDEYNHKRYPPGDPSKRAFAYFVLSGGRFV 399
            S+ P  Q   +++LPAT AA+KNP +KIVYD+ NH+RYPPGDPSKRAFAYFVL+GGRFV
Sbjct: 56  NSVSPAHQLGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFVLTGGRFV 115

Query: 400 YASXXXXXXXXXXXSMSASKDVLALASLEVDLSS 501
           YAS           SMSASKDVLALASLEVDLSS
Sbjct: 116 YASSVRLLILKFVLSMSASKDVLALASLEVDLSS 149
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>UCRI3_TOBAC (P51133) Ubiquinol-cytochrome c reductase iron-sulfur subunit 3,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein 3) (RISP3)
          Length = 268

 Score =  142 bits (359), Expect = 4e-34
 Identities = 83/154 (53%), Positives = 99/154 (64%)
 Frame = +1

Query: 40  MLRVAGRRISSHLAWRPXXXXXXGRTPLVGGLPGEDFPWDQNPRFAIESPFYVAARGFSA 219
           MLR+AGR++SS  A R        R P              +P  ++ S F    RGFS+
Sbjct: 1   MLRIAGRKLSSSAATRSSSAFFT-RNPFTFTDDSSSPARSPSPA-SLASQFLDQFRGFSS 58

Query: 220 ESLVPRSQDVGLAELPATAAALKNPCAKIVYDEYNHKRYPPGDPSKRAFAYFVLSGGRFV 399
            S+ P  Q   +++LPAT AA+KNP +KIVYD+ NH+RYPPGDPSKRAFAYFVL+GGRFV
Sbjct: 59  NSVSPAHQTGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFVLTGGRFV 118

Query: 400 YASXXXXXXXXXXXSMSASKDVLALASLEVDLSS 501
           YAS           SMSASKDVLALASLEVDLSS
Sbjct: 119 YASLVRLLILKFVLSMSASKDVLALASLEVDLSS 152
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>UCRI5_TOBAC (P51135) Ubiquinol-cytochrome c reductase iron-sulfur subunit 5,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein 5) (RISP5)
          Length = 268

 Score =  142 bits (358), Expect = 5e-34
 Identities = 83/154 (53%), Positives = 99/154 (64%)
 Frame = +1

Query: 40  MLRVAGRRISSHLAWRPXXXXXXGRTPLVGGLPGEDFPWDQNPRFAIESPFYVAARGFSA 219
           MLR+AGR++SS  A R        R P              +P  ++ S F    RGFS+
Sbjct: 1   MLRIAGRKLSSSAAARSSSAFFT-RNPFTFTDDSSSPTRSPSPT-SLASQFLDQFRGFSS 58

Query: 220 ESLVPRSQDVGLAELPATAAALKNPCAKIVYDEYNHKRYPPGDPSKRAFAYFVLSGGRFV 399
            S+ P  Q   +++LPAT AA+KNP +KIVYD+ NH+RYPPGDPSKRAFAYFVL+GGRFV
Sbjct: 59  NSVSPAHQTGLVSDLPATVAAIKNPSSKIVYDDSNHERYPPGDPSKRAFAYFVLTGGRFV 118

Query: 400 YASXXXXXXXXXXXSMSASKDVLALASLEVDLSS 501
           YAS           SMSASKDVLALASLEVDLSS
Sbjct: 119 YASLVRLLILKFVLSMSASKDVLALASLEVDLSS 152
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>UCRI2_TOBAC (P51132) Ubiquinol-cytochrome c reductase iron-sulfur subunit 2,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein 2) (RISP2)
          Length = 272

 Score =  141 bits (355), Expect = 1e-33
 Identities = 85/158 (53%), Positives = 100/158 (63%), Gaps = 4/158 (2%)
 Frame = +1

Query: 40  MLRVAGRRISSHLAWRPXXXXXXGRTPLVGGLPGEDFPWDQNPRF---AIESPFYVAARG 210
           MLR+AGRR SS   W P        +  +            +PR    ++ S F    RG
Sbjct: 1   MLRIAGRRASSLSRW-PVRSVAPSSSAFISANHFSSDDDSSSPRSISPSLASVFLHHTRG 59

Query: 211 FSAESLVPRSQDVGLA-ELPATAAALKNPCAKIVYDEYNHKRYPPGDPSKRAFAYFVLSG 387
           FS+ S V  + D+GL  +LP T AA+KNP +KIVYDE+NH+RYPPGDPSKRAFAYFVL+G
Sbjct: 60  FSSNS-VSHAHDMGLVPDLPPTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFAYFVLTG 118

Query: 388 GRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSS 501
           GRFVYAS           SMSASKDVLALASLEVDLSS
Sbjct: 119 GRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSS 156
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>UCRI1_TOBAC (P49729) Ubiquinol-cytochrome c reductase iron-sulfur subunit 1,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein 1) (RISP1) (Fragment)
          Length = 258

 Score =  134 bits (336), Expect = 2e-31
 Identities = 72/110 (65%), Positives = 84/110 (76%), Gaps = 1/110 (0%)
 Frame = +1

Query: 175 AIESPFYVAARGFSAESLVPRSQDVGLA-ELPATAAALKNPCAKIVYDEYNHKRYPPGDP 351
           ++ S F    RGFS+ S+ P + D+GL  +LP T AA+KNP +KIVYDE+NH+RYPPGDP
Sbjct: 34  SLASVFLHHTRGFSSNSVSP-AHDMGLVPDLPPTVAAIKNPTSKIVYDEHNHERYPPGDP 92

Query: 352 SKRAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSS 501
           SKRAFAYFVL+GGRFVYAS           SMSASKDVLALASLEVDLSS
Sbjct: 93  SKRAFAYFVLTGGRFVYASLMRLLILKFVLSMSASKDVLALASLEVDLSS 142
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>UCRI4_TOBAC (P51134) Ubiquinol-cytochrome c reductase iron-sulfur subunit 4,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein 4) (RISP4)
          Length = 236

 Score =  129 bits (325), Expect = 3e-30
 Identities = 70/110 (63%), Positives = 82/110 (74%), Gaps = 1/110 (0%)
 Frame = +1

Query: 175 AIESPFYVAARGFSAESLVPRSQDVGLA-ELPATAAALKNPCAKIVYDEYNHKRYPPGDP 351
           ++ S  +    GFS+ S V  + D+GL  +LP T AA+KNP +KIVYDE+NH+RYPPGDP
Sbjct: 12  SVTSNSFSIISGFSSNS-VSHAHDMGLVPDLPPTVAAIKNPTSKIVYDEHNHERYPPGDP 70

Query: 352 SKRAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSS 501
           SKRAFAYFVL+GGRFVYAS           SMSASKDVLALASLEVDLSS
Sbjct: 71  SKRAFAYFVLTGGRFVYASLVRLLILKFVLSMSASKDVLALASLEVDLSS 120
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>UCRI_NEUCR (P07056) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP)
          Length = 231

 Score = 33.1 bits (74), Expect = 0.43
 Identities = 17/46 (36%), Positives = 27/46 (58%)
 Frame = +1

Query: 364 FAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSS 501
           F+YF++     + A+           +MSAS DVLA+A +EVDL++
Sbjct: 70  FSYFMVGTMGAITAAGAKSTIQEFLKNMSASADVLAMAKVEVDLNA 115
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>UCRI_YEAST (P08067) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP)
          Length = 215

 Score = 32.7 bits (73), Expect = 0.56
 Identities = 15/48 (31%), Positives = 29/48 (60%)
 Frame = +1

Query: 358 RAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLSS 501
           R++AYF++     + ++           SM+A+ DVLA+A +EV+L++
Sbjct: 53  RSYAYFMVGAMGLLSSAGAKSTVETFISSMTATADVLAMAKVEVNLAA 100
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>UCRI_THEGE (Q69BK2) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP)
          Length = 274

 Score = 32.3 bits (72), Expect = 0.73
 Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 9/73 (12%)
 Frame = +1

Query: 307 VYDEYNHKRYPPGDPSK---------RAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASK 459
           V D Y+++R    D +K         + F+Y V +      A            SMSAS 
Sbjct: 85  VPDFYDYRRLEVLDSTKSSRESSEARKGFSYLVTAVTTVGVAYAAKNAVTQFISSMSASA 144

Query: 460 DVLALASLEVDLS 498
           DVLA+A +E++LS
Sbjct: 145 DVLAMAKIEINLS 157
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>UCRI_HYLSY (Q69BJ6) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP)
          Length = 274

 Score = 32.0 bits (71), Expect = 0.95
 Identities = 18/49 (36%), Positives = 25/49 (51%)
 Frame = +1

Query: 352 SKRAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLS 498
           +++ F+Y V +      A            SMSAS DVLALA +E+ LS
Sbjct: 109 ARKGFSYLVTAVTTVGVAYAAKNAVTQFVSSMSASADVLALAKIEIKLS 157
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>UCRI_COLPO (Q69BK0) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP)
          Length = 274

 Score = 32.0 bits (71), Expect = 0.95
 Identities = 18/49 (36%), Positives = 26/49 (53%)
 Frame = +1

Query: 352 SKRAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLS 498
           ++++F+Y V +      A            SMSAS DVLA+A +EV LS
Sbjct: 109 ARKSFSYMVTAVTTVGVAYAAKNAVTQFVSSMSASADVLAMAKIEVKLS 157
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>UCRI_CERAE (Q69BK1) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP)
          Length = 274

 Score = 32.0 bits (71), Expect = 0.95
 Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 9/73 (12%)
 Frame = +1

Query: 307 VYDEYNHKRYPPGDPSK---------RAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASK 459
           V D Y+++R    D +K         + F+Y V +      A            SMSAS 
Sbjct: 85  VPDFYDYRRLEVLDSTKSSRESSEARKGFSYLVTAVTTVGVAYAAKNVVTQFISSMSASA 144

Query: 460 DVLALASLEVDLS 498
           DVLA+A +E++LS
Sbjct: 145 DVLAMAKIEINLS 157
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>UCRI_PANTR (Q69BK5) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP)
          Length = 274

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 18/49 (36%), Positives = 24/49 (48%)
 Frame = +1

Query: 352 SKRAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLS 498
           +++ F+Y V        A            SMSAS DVLALA +E+ LS
Sbjct: 109 ARKGFSYLVTGVTTVGVAYAAKNAVTQFVSSMSASADVLALAKIEIKLS 157
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>UCRI_PANPA (Q69BK6) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP)
          Length = 274

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 18/49 (36%), Positives = 24/49 (48%)
 Frame = +1

Query: 352 SKRAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLS 498
           +++ F+Y V        A            SMSAS DVLALA +E+ LS
Sbjct: 109 ARKGFSYLVTGVTTVGVAYAAKNAVTQFVSSMSASADVLALAKIEIKLS 157
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>UCRI_HUMAN (P47985) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP)
          Length = 274

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 18/49 (36%), Positives = 24/49 (48%)
 Frame = +1

Query: 352 SKRAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLS 498
           +++ F+Y V        A            SMSAS DVLALA +E+ LS
Sbjct: 109 ARKGFSYLVTGVTTVGVAYAAKNAVTQFVSSMSASADVLALAKIEIKLS 157
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>UCRI_GORGO (Q69BK4) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP)
          Length = 274

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 18/49 (36%), Positives = 24/49 (48%)
 Frame = +1

Query: 352 SKRAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLS 498
           +++ F+Y V        A            SMSAS DVLALA +E+ LS
Sbjct: 109 ARKGFSYLVTGVTTVGVAYAAKNAVTQFVSSMSASADVLALAKIEIKLS 157
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>KCAB1_RABIT (Q9XT31) Voltage-gated potassium channel beta-1 subunit (K(+)|
           channel beta-1 subunit) (Kv-beta-1)
          Length = 419

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
 Frame = -1

Query: 390 PTAQHKVGKGTLAGVTRWVPLVVILVVDNFGTGILQSSRS---CWELSQPYILAPRNKRF 220
           P   HK+G G +     W PL   ++   +G G+ +SSR+   C++  +  I++   ++ 
Sbjct: 282 PELYHKIGVGAMT----WSPLACGIISGKYGNGVPESSRASLKCYQWLKERIVSEEGRKQ 337

Query: 219 SRK 211
             K
Sbjct: 338 QNK 340
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>KCAB1_HUMAN (Q14722) Voltage-gated potassium channel beta-1 subunit (K(+)|
           channel beta-1 subunit) (Kv-beta-1)
          Length = 419

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
 Frame = -1

Query: 390 PTAQHKVGKGTLAGVTRWVPLVVILVVDNFGTGILQSSRS---CWELSQPYILAPRNKRF 220
           P   HK+G G +     W PL   ++   +G G+ +SSR+   C++  +  I++   ++ 
Sbjct: 282 PELYHKIGVGAMT----WSPLACGIISGKYGNGVPESSRASLKCYQWLKERIVSEEGRKQ 337

Query: 219 SRK 211
             K
Sbjct: 338 QNK 340
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>KCAB1_RAT (P63144) Voltage-gated potassium channel beta-1 subunit (K(+)|
           channel beta-1 subunit) (Kv-beta-1)
          Length = 401

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
 Frame = -1

Query: 390 PTAQHKVGKGTLAGVTRWVPLVVILVVDNFGTGILQSSRS---CWELSQPYILAPRNKRF 220
           P   HK+G G +     W PL   ++   +G G+ +SSR+   C++  +  I++   ++ 
Sbjct: 264 PELYHKIGVGAMT----WSPLACGIISGKYGNGVPESSRASLKCYQWLKERIVSEEGRKQ 319

Query: 219 SRK 211
             K
Sbjct: 320 QNK 322
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>KCAB1_MOUSE (P63143) Voltage-gated potassium channel beta-1 subunit (K(+)|
           channel beta-1 subunit) (Kv-beta-1)
          Length = 401

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
 Frame = -1

Query: 390 PTAQHKVGKGTLAGVTRWVPLVVILVVDNFGTGILQSSRS---CWELSQPYILAPRNKRF 220
           P   HK+G G +     W PL   ++   +G G+ +SSR+   C++  +  I++   ++ 
Sbjct: 264 PELYHKIGVGAMT----WSPLACGIISGKYGNGVPESSRASLKCYQWLKERIVSEEGRKQ 319

Query: 219 SRK 211
             K
Sbjct: 320 QNK 322
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>KCAB1_CHICK (Q9PWR1) Voltage-gated potassium channel beta-1 subunit (K(+)|
           channel beta-1 subunit) (Kv-beta-1)
          Length = 401

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
 Frame = -1

Query: 390 PTAQHKVGKGTLAGVTRWVPLVVILVVDNFGTGILQSSRS---CWELSQPYILAPRNKRF 220
           P   HK+G G +     W PL   ++   +G G+ +SSR+   C++  +  I++   ++ 
Sbjct: 264 PELYHKIGVGAMT----WSPLACGIISGKYGNGVPESSRAALKCYQWLKEKIISEEGRKQ 319

Query: 219 SRK 211
             K
Sbjct: 320 QTK 322
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>KCAB1_BOVIN (Q4PJK1) Voltage-gated potassium channel beta-1 subunit (K(+)|
           channel beta-1 subunit) (Kv-beta-1)
          Length = 401

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
 Frame = -1

Query: 390 PTAQHKVGKGTLAGVTRWVPLVVILVVDNFGTGILQSSRS---CWELSQPYILAPRNKRF 220
           P   HK+G G +     W PL   ++   +G G+ +SSR+   C++  +  I++   ++ 
Sbjct: 264 PELYHKIGVGAMT----WSPLACGIISGKYGNGVPESSRASLKCYQWLKERIVSEEGRKQ 319

Query: 219 SRK 211
             K
Sbjct: 320 QNK 322
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>UCRI_PONPY (Q69BK3) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP)
          Length = 274

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 18/49 (36%), Positives = 24/49 (48%)
 Frame = +1

Query: 352 SKRAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLS 498
           +++ F+Y V        A            SMSAS DVLALA +E+ LS
Sbjct: 109 ARKGFSYLVTGVTTVGVAYAAKNVVTQFVSSMSASADVLALAKIEIKLS 157
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>KCAB1_MUSPU (Q28528) Voltage-gated potassium channel beta-1 subunit (K(+)|
           channel beta-1 subunit) (Kv-beta-1)
          Length = 408

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
 Frame = -1

Query: 390 PTAQHKVGKGTLAGVTRWVPLVVILVVDNFGTGILQSSRS---CWELSQPYILAPRNKRF 220
           P   HK+G G +     W PL   ++   +G G+ +SSR+   C++  +  I++   ++ 
Sbjct: 271 PELYHKIGVGAMT----WSPLACGIISGKYGNGVPESSRASLKCYQWLKERIVSEEGRKQ 326

Query: 219 SRK 211
             K
Sbjct: 327 QNK 329
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>UCRI_RAT (P20788) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP) (Liver regeneration-related
           protein LRRGT00195)
          Length = 274

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = +1

Query: 352 SKRAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLS 498
           +++ F+Y V +      A            SMSAS DVLA++ +E+ LS
Sbjct: 109 ARKGFSYLVTATTTVGVAYAAKNAVSQFVSSMSASADVLAMSKIEIKLS 157
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>DPOE_EMENI (O93845) DNA polymerase epsilon, catalytic subunit A (EC 2.7.7.7)|
            (DNA polymerase II subunit A)
          Length = 2207

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 15/64 (23%), Positives = 30/64 (46%)
 Frame = +1

Query: 142  EDFPWDQNPRFAIESPFYVAARGFSAESLVPRSQDVGLAELPATAAALKNPCAKIVYDEY 321
            +D P D +PR  I+  +Y+   G   + L+          +PA    ++NP  ++ + E+
Sbjct: 1097 KDDPGDMDPRSVIDWDYYLERLGSVVQKLIT---------IPAALQKIRNPVPRVAHPEW 1147

Query: 322  NHKR 333
              +R
Sbjct: 1148 LQRR 1151
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>UCRI_MOUSE (Q9CR68) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP)
          Length = 274

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = +1

Query: 352 SKRAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLS 498
           +++ F+Y V +      A            SMSAS DVLA++ +E+ LS
Sbjct: 109 ARKGFSYLVTATTTVGVAYAAKNVVSQFVSSMSASADVLAMSKIEIKLS 157
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>UCRI_BOVIN (P13272) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP) [Contains:
           Ubiquinol-cytochrome c reductase 8 kDa protein (Complex
           III subunit IX)]
          Length = 274

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = +1

Query: 352 SKRAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLS 498
           +++ F+Y V +      A            SMSAS DVLA++ +E+ LS
Sbjct: 109 ARKGFSYLVTATTTVGVAYAAKNVVSQFVSSMSASADVLAMSKIEIKLS 157
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>UCRI_LAGLA (Q69BJ8) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP)
          Length = 274

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 15/49 (30%), Positives = 24/49 (48%)
 Frame = +1

Query: 352 SKRAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLS 498
           +++ F+Y V +                   SMSAS DVLA++ +E+ LS
Sbjct: 109 ARKGFSYLVTAATAVGVTYAAKSIVTQFVSSMSASADVLAMSKIEIKLS 157
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>MBHL_RHILV (P18636) Uptake hydrogenase large subunit (EC 1.12.99.6)|
           (Hydrogenlyase) (Membrane-bound hydrogenase large
           subunit)
          Length = 596

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 21/67 (31%), Positives = 27/67 (40%), Gaps = 3/67 (4%)
 Frame = -1

Query: 339 WVPLVVILVVDNFGTGILQSSRSCWELSQPYI---LAPRNKRFSRKASGSNVEGGFNGEA 169
           WV +V  L  D   T  L  S S W LS P     +  R K+F         + G+ G A
Sbjct: 130 WVDVVSALSADPKATSALAQSISDWPLSSPGYFKDIQTRLKKFVESGQLGPFKNGYWGNA 189

Query: 168 RILIPGE 148
              +P E
Sbjct: 190 SYKLPPE 196
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>SREC2_MOUSE (P59222) Scavenger receptor class F member 2 precursor (Scavenger|
           receptor expressed by endothelial cells 2 protein)
           (SREC-II)
          Length = 833

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 22/91 (24%), Positives = 35/91 (38%)
 Frame = -3

Query: 439 GQTLGRANATTRHTQISHRSTQSRQRHACWGHQVGTSCGYTRRRQFWHRDSSEQPQLLGA 260
           G  +   N+T    ++  R  + R RH  +G    T C     RQFW  D  E       
Sbjct: 68  GIAVCEGNSTCSENEVCVRPGECRCRHGYFGANCDTKC----PRQFWGPDCKE------- 116

Query: 259 QPTLHPGSSEQEIQPKSLWQQRRRGIQWRSA 167
           + + HP    +++  +     RR G +   A
Sbjct: 117 RCSCHPHGQCEDVTGQCTCHARRWGARCEHA 147
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>B2_DAUCA (P37707) B2 protein|
          Length = 207

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 18/51 (35%), Positives = 26/51 (50%)
 Frame = -2

Query: 392 LPPLNTK*AKARLLGSPGGYLLWLYSS*TILAQGFFRAAAVAGSSANPTSW 240
           LPP      +A   G P    L+LY+  T    G F AA+  G++ +PT+W
Sbjct: 97  LPPRYRDSVRAITPGLP----LFLYNYSTHQLHGVFEAASFGGTNIDPTAW 143
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>UCRI_SAISC (Q69BJ7) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP)
          Length = 274

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 15/49 (30%), Positives = 24/49 (48%)
 Frame = +1

Query: 352 SKRAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLS 498
           +++ F+Y V +                   SMSAS DVLA++ +E+ LS
Sbjct: 109 ARKVFSYMVTATTAVGVTYAAKSIVTQFISSMSASADVLAMSKIEIKLS 157
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>UCRI_AOTAZ (Q69BJ9) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP)
          Length = 274

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 15/49 (30%), Positives = 24/49 (48%)
 Frame = +1

Query: 352 SKRAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEVDLS 498
           +++ F+Y V +                   SMSAS DVLA++ +E+ LS
Sbjct: 109 ARKGFSYLVTATTAVGVTYAAKSIVTQFVSSMSASADVLAMSKIEIKLS 157
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>UCRI_SCHPO (Q09154) Ubiquinol-cytochrome c reductase iron-sulfur subunit,|
           mitochondrial precursor (EC 1.10.2.2) (Rieske
           iron-sulfur protein) (RISP)
          Length = 228

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 22/63 (34%), Positives = 30/63 (47%)
 Frame = +1

Query: 310 YDEYNHKRYPPGDPSKRAFAYFVLSGGRFVYASXXXXXXXXXXXSMSASKDVLALASLEV 489
           + EY  K    GD S R  +Y ++     + A+           S SAS DVLA++  EV
Sbjct: 53  FSEYQTKS--TGDRS-RVISYAMVGTMGALTAAGAQATVHDFLASWSASADVLAMSKAEV 109

Query: 490 DLS 498
           DLS
Sbjct: 110 DLS 112


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.317    0.133    0.397 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,810,529
Number of Sequences: 219361
Number of extensions: 1392534
Number of successful extensions: 4251
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 4130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4244
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3581144924
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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