>CLAT_HUMAN (P28329) Choline O-acetyltransferase (EC 2.3.1.6) (CHOACTase)|
           (Choline acetylase) (ChAT)
          Length = 748

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 20/62 (32%), Positives = 25/62 (40%)
 Frame = -3

Query: 379 ASL*GGTLPYRCILTSHSFGRSLSPVHLQRKGARSVSYYALFKGWLLLGKPPGCLCTPTS 200
           ASL  G L Y+ +L SHS     +   L  +      YY LF  + L G     L    S
Sbjct: 236 ASLISGVLSYKALLDSHSIPTDCAKGQLSGQPLCMKQYYGLFSSYRLPGHTQDTLVAQNS 295

Query: 199 FI 194
            I
Sbjct: 296 SI 297

>CCSA_PINTH (P41650) Cytochrome c biogenesis protein ccsA|
          Length = 320

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 31/97 (31%), Positives = 39/97 (40%)
 Frame = -3

Query: 439 VFVTQADILASASSTPAFAVASL*GGTLPYRCILTSHSFGRSLSPVHLQRKGARSVSYYA 260
           +F+T   ILA  S +    V  +  GTL YR    S S G+ +    L   G        
Sbjct: 2   IFITLEHILAHISFSLILVVTLIYWGTLVYRIEGLSSSGGKGMIVTFLCTTG-------L 54

Query: 259 LFKGWLLLGKPPGCLCTPTSFITERSFRGLSW*SGLF 149
           L   WL  G        P S + E SF  LSW S +F
Sbjct: 55  LINRWLYSGH------LPLSNLYE-SFMFLSWSSSVF 84

>TIM44_YEAST (Q01852) Import inner membrane translocase subunit TIM44,|
           mitochondrial precursor (Mitochondrial protein import
           protein 1) (Inner membrane import site protein 45)
           (ISP45) (Membrane import machinery protein MIM44)
          Length = 431

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = +2

Query: 41  SGTKSRQTLNTRYDPKITGVKVGQXXXXXXASSSRGKQPGSP 166
           SGT SR TL  RY  + TG+ V +       + ++G  P SP
Sbjct: 10  SGTSSR-TLTARYRSQYTGLLVARVLFSTSTTRAQGGNPRSP 50

>NHR71_CAEEL (Q9GTD4) Nuclear hormone receptor family member nhr-71|
          Length = 579

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = +1

Query: 289 CAEDERG*AICRSCGMSKCIGRGAFRLRGKQPRK 390
           C  D  G   CRSC  +KCI  G  ++   QPR+
Sbjct: 53  CLIDPDGRCACRSCRFTKCIEAG-MKIGAVQPRR 85

>SPRT_VIBVY (Q7MHK4) Protein sprT|
          Length = 168

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = -3

Query: 433 VTQADILASASSTPAFAVASL*GGTLPYRC 344
           + Q   L  A++T  FAVAS+ G T  YRC
Sbjct: 100 IMQGVFLLPANTTHQFAVASVQGKTFQYRC 129

>SPRT_VIBVU (Q8DCA5) Protein sprT|
          Length = 168

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = -3

Query: 433 VTQADILASASSTPAFAVASL*GGTLPYRC 344
           + Q   L  A++T  FAVAS+ G T  YRC
Sbjct: 100 IMQGVFLLPANTTHQFAVASVQGKTFQYRC 129


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,004,369
Number of Sequences: 219361
Number of extensions: 1308586
Number of successful extensions: 2897
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2896
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3246866728
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)