| Clone Name | baal36j11 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 936 bits (472), Expect = 0.0 Identities = 479/480 (99%), Gaps = 1/480 (0%) Strand = Plus / Minus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119067 catctaggggtaaag-cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 119009 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119008 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 118949 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118948 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 118889 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118888 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 118829 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118828 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 118769 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118768 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 118709 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118708 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 118649 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118648 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 118589 Score = 936 bits (472), Expect = 0.0 Identities = 479/480 (99%), Gaps = 1/480 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96089 catctaggggtaaag-cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 96147 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96148 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 96207 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96208 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 96267 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96268 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 96327 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96328 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 96387 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96388 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 96447 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96448 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 96507 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96508 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 96567
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 936 bits (472), Expect = 0.0 Identities = 479/480 (99%), Gaps = 1/480 (0%) Strand = Plus / Minus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119067 catctaggggtaaag-cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 119009 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119008 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 118949 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118948 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 118889 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118888 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 118829 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118828 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 118769 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118768 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 118709 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118708 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 118649 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118648 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 118589 Score = 936 bits (472), Expect = 0.0 Identities = 479/480 (99%), Gaps = 1/480 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96089 catctaggggtaaag-cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 96147 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96148 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 96207 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96208 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 96267 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96268 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 96327 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96328 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 96387 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96388 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 96447 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96448 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 96507 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96508 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 96567
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 936 bits (472), Expect = 0.0 Identities = 479/480 (99%), Gaps = 1/480 (0%) Strand = Plus / Minus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119016 catctaggggtaaag-cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 118958 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118957 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 118898 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118897 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 118838 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118837 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 118778 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118777 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 118718 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118717 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 118658 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118657 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 118598 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118597 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 118538 Score = 936 bits (472), Expect = 0.0 Identities = 479/480 (99%), Gaps = 1/480 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96034 catctaggggtaaag-cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 96092 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96093 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 96152 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96153 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 96212 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96213 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 96272 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96273 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 96332 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96333 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 96392 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96393 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 96452 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96453 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 96512
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 936 bits (472), Expect = 0.0 Identities = 479/480 (99%), Gaps = 1/480 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508667 catctaggggtaaag-cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 31508725 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508726 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 31508785 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508786 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 31508845 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508846 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 31508905 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508906 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 31508965 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508966 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 31509025 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31509026 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 31509085 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31509086 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 31509145 Score = 716 bits (361), Expect = 0.0 Identities = 361/361 (100%) Strand = Plus / Minus Query: 120 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513317 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 11513258 Query: 180 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513257 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 11513198 Query: 240 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513197 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 11513138 Query: 300 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513137 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 11513078 Query: 360 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513077 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 11513018 Query: 420 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513017 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 11512958 Query: 480 c 480 | Sbjct: 11512957 c 11512957 Score = 505 bits (255), Expect = e-140 Identities = 258/259 (99%) Strand = Plus / Minus Query: 222 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 281 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320663 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 27320604 Query: 282 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 341 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320603 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 27320544 Query: 342 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 401 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320543 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 27320484 Query: 402 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 461 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320483 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccct 27320424 Query: 462 gaaaacccaaggtttcctc 480 ||||||||||||||||||| Sbjct: 27320423 gaaaacccaaggtttcctc 27320405 Score = 133 bits (67), Expect = 6e-28 Identities = 73/75 (97%) Strand = Plus / Minus Query: 136 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 195 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 25722178 atcgtcgagaggaaaacagcccggatcaccagctaaggcccctaaatgaccgcttagtga 25722119 Query: 196 taaaggaggtggggg 210 ||||||||||||||| Sbjct: 25722118 taaaggaggtggggg 25722104 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 139 gtcgagagggaaacagcccggatcaccagctaaggccc 176 |||||||||||||||||||||||||||||||||||||| Sbjct: 28582253 gtcgagagggaaacagcccggatcaccagctaaggccc 28582290 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 38 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataa 92 |||| ||||||||||||||| |||||| |||||| || |||||||| |||||||| Sbjct: 35945442 gcgaacggtaccaaatcgagacaaactttgaatattatatatgacctaaaaataa 35945496
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 936 bits (472), Expect = 0.0 Identities = 479/480 (99%), Gaps = 1/480 (0%) Strand = Plus / Minus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83929 catctaggggtaaag-cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 83871 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83870 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 83811 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83810 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 83751 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83750 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 83691 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83690 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 83631 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83630 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 83571 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83570 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 83511 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83510 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 83451
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 936 bits (472), Expect = 0.0 Identities = 479/480 (99%), Gaps = 1/480 (0%) Strand = Plus / Minus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119036 catctaggggtaaag-cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 118978 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118977 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 118918 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118917 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 118858 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118857 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 118798 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118797 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 118738 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118737 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 118678 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118677 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 118618 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118617 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 118558 Score = 936 bits (472), Expect = 0.0 Identities = 479/480 (99%), Gaps = 1/480 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96082 catctaggggtaaag-cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 96140 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96141 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 96200 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96201 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 96260 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96261 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 96320 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96321 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 96380 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96381 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 96440 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96441 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 96500 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96501 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 96560
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 936 bits (472), Expect = 0.0 Identities = 479/480 (99%), Gaps = 1/480 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123130 catctaggggtaaag-cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 123188 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123189 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 123248 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123249 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 123308 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123309 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 123368 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123369 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 123428 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123429 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 123488 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123489 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 123548 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123549 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 123608 Score = 936 bits (472), Expect = 0.0 Identities = 479/480 (99%), Gaps = 1/480 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14856 catctaggggtaaag-cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 14914 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14915 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 14974 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14975 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 15034 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15035 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 15094 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15095 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 15154 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15155 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 15214 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15215 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 15274 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15275 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 15334
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 936 bits (472), Expect = 0.0 Identities = 479/480 (99%), Gaps = 1/480 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141664 catctaggggtaaag-cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 141722 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141723 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 141782 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141783 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 141842 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141843 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 141902 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141903 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 141962 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141963 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 142022 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142023 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 142082 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142083 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 142142
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 936 bits (472), Expect = 0.0 Identities = 479/480 (99%), Gaps = 1/480 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269016 catctaggggtaaag-cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 9269074 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269075 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 9269134 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269135 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 9269194 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269195 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 9269254 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269255 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 9269314 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269315 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 9269374 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269375 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 9269434 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269435 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 9269494 Score = 936 bits (472), Expect = 0.0 Identities = 479/480 (99%), Gaps = 1/480 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228516 catctaggggtaaag-cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 9228574 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228575 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 9228634 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228635 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 9228694 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228695 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 9228754 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228755 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 9228814 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228815 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 9228874 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228875 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 9228934 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228935 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 9228994 Score = 936 bits (472), Expect = 0.0 Identities = 479/480 (99%), Gaps = 1/480 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165104 catctaggggtaaag-cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 9165162 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165163 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 9165222 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165223 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 9165282 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165283 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 9165342 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165343 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 9165402 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165403 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 9165462 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165463 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 9165522 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165523 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 9165582 Score = 936 bits (472), Expect = 0.0 Identities = 479/480 (99%), Gaps = 1/480 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056930 catctaggggtaaag-cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 9056988 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056989 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 9057048 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057049 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 9057108 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057109 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 9057168 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057169 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 9057228 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057229 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 9057288 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057289 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 9057348 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057349 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 9057408
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 936 bits (472), Expect = 0.0 Identities = 479/480 (99%), Gaps = 1/480 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939001 catctaggggtaaag-cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 19939059 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939060 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 19939119 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939120 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 19939179 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939180 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 19939239 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939240 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 19939299 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939300 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 19939359 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939360 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 19939419 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939420 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 19939479 Score = 928 bits (468), Expect = 0.0 Identities = 478/480 (99%), Gaps = 1/480 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387868 catctaggggtaaag-cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 10387926 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387927 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 10387986 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387987 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 10388046 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388047 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 10388106 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388107 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 10388166 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 10388167 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggagagcg 10388226 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388227 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 10388286 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388287 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 10388346 Score = 928 bits (468), Expect = 0.0 Identities = 478/480 (99%), Gaps = 1/480 (0%) Strand = Plus / Minus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276430 catctaggggtaaag-cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 10276372 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276371 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 10276312 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276311 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 10276252 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276251 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 10276192 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276191 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 10276132 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276131 gaacggggctaagcaatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 10276072 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276071 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 10276012 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276011 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 10275952 Score = 77.8 bits (39), Expect = 3e-11 Identities = 39/39 (100%) Strand = Plus / Minus Query: 276 gatcgagcgcccttgcgctgaagatgaacggggctaagc 314 ||||||||||||||||||||||||||||||||||||||| Sbjct: 15833511 gatcgagcgcccttgcgctgaagatgaacggggctaagc 15833473 Score = 54.0 bits (27), Expect = 4e-04 Identities = 85/102 (83%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 45 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 104 ||||||||||||| |||| ||| |||||||||| ||| ||||||||||| ||||||| | Sbjct: 781053 gtaccaaatcgagacaaagtctaaatactagatgtga--caaaaataaca-gggtcaatg 781109 Query: 105 tcggccagtgagacgatgggggataagcttcatcgtcgagag 146 || || ||||||| | ||| ||||| || ||||||||||| Sbjct: 781110 tcagctagtgagatggcgggaaataagttttatcgtcgagag 781151 Score = 48.1 bits (24), Expect = 0.027 Identities = 51/60 (85%) Strand = Plus / Minus Query: 217 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 276 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 2736127 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 2736068
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 936 bits (472), Expect = 0.0 Identities = 479/480 (99%), Gaps = 1/480 (0%) Strand = Plus / Minus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241265 catctaggggtaaag-cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 9241207 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241206 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 9241147 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241146 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 9241087 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241086 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 9241027 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241026 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 9240967 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240966 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 9240907 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240906 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 9240847 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240846 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 9240787 Score = 174 bits (88), Expect = 2e-40 Identities = 141/156 (90%), Gaps = 2/156 (1%) Strand = Plus / Minus Query: 21 gtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatg 80 |||| |||||||| ||| ||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 3580538 gtttaggtgcgggttgcacgagcggcaccaaatcgagacaaactctgaatactagatatg 3580479 Query: 81 acccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgt 140 |||||||| |||||||||||| | |||| |||||||||||||||||||||||||||||| Sbjct: 3580478 acccaaaagtaacaggggtcatgatcgg-tagtgagacgatgggggataagcttcatcgt 3580420 Query: 141 cgagagggaaac-agcccggatcaccagctaaggcc 175 |||||| ||||| | ||| |||||||||||||||| Sbjct: 3580419 cgagagagaaacaaccccaaatcaccagctaaggcc 3580384 Score = 109 bits (55), Expect = 8e-21 Identities = 90/102 (88%), Gaps = 6/102 (5%) Strand = Plus / Minus Query: 164 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtggggg------tgcaaag 217 ||||||||| || ||||||||||||| ||| ||||| |||||||||| ||||||| Sbjct: 3580385 ccagctaagaccactaaatgaccgcttagttataaatgaggtgggggggggggtgcaaag 3580326 Query: 218 acagccaggaggtttgcctagaagcagccaccctttaaagag 259 ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 3580325 acaaccaggaggtttgcctagaagcagccaccctttaaagag 3580284 Score = 77.8 bits (39), Expect = 3e-11 Identities = 45/47 (95%) Strand = Plus / Minus Query: 325 agctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 371 |||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct: 3580285 agctatgggatatcaaaatgcatcggtaggggagcgttccgccttag 3580239 Score = 48.1 bits (24), Expect = 0.027 Identities = 36/40 (90%) Strand = Plus / Minus Query: 289 tgcgctgaagatgaacggggctaagcgatctgccgaagct 328 |||| |||| ||||| |||||||||||||||||| ||||| Sbjct: 22199132 tgcgttgaaaatgaatggggctaagcgatctgccaaagct 22199093 Score = 40.1 bits (20), Expect = 6.5 Identities = 35/40 (87%) Strand = Plus / Minus Query: 163 accagctaaggcccctaaatgaccgctcagtgataaagga 202 ||||| |||||| ||||||||||||||| |||| ||||| Sbjct: 3319509 accagataaggcttctaaatgaccgctcaatgatgaagga 3319470
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 936 bits (472), Expect = 0.0 Identities = 479/480 (99%), Gaps = 1/480 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599183 catctaggggtaaag-cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 31599241 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599242 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 31599301 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599302 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 31599361 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599362 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 31599421 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599422 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 31599481 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599482 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 31599541 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599542 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 31599601 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599602 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 31599661 Score = 716 bits (361), Expect = 0.0 Identities = 361/361 (100%) Strand = Plus / Minus Query: 120 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11510080 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 11510021 Query: 180 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11510020 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 11509961 Query: 240 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509960 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 11509901 Query: 300 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509900 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 11509841 Query: 360 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509840 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 11509781 Query: 420 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509780 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 11509721 Query: 480 c 480 | Sbjct: 11509720 c 11509720 Score = 505 bits (255), Expect = e-140 Identities = 258/259 (99%) Strand = Plus / Minus Query: 222 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 281 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411986 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 27411927 Query: 282 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 341 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411926 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 27411867 Query: 342 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 401 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411866 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 27411807 Query: 402 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 461 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411806 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccct 27411747 Query: 462 gaaaacccaaggtttcctc 480 ||||||||||||||||||| Sbjct: 27411746 gaaaacccaaggtttcctc 27411728 Score = 133 bits (67), Expect = 6e-28 Identities = 73/75 (97%) Strand = Plus / Minus Query: 136 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 195 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 25813487 atcgtcgagaggaaaacagcccggatcaccagctaaggcccctaaatgaccgcttagtga 25813428 Query: 196 taaaggaggtggggg 210 ||||||||||||||| Sbjct: 25813427 taaaggaggtggggg 25813413 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 139 gtcgagagggaaacagcccggatcaccagctaaggccc 176 |||||||||||||||||||||||||||||||||||||| Sbjct: 28673577 gtcgagagggaaacagcccggatcaccagctaaggccc 28673614 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 38 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataa 92 |||| ||||||||||||||| |||||| |||||| || |||||||| |||||||| Sbjct: 36035516 gcgaacggtaccaaatcgagacaaactttgaatattatatatgacctaaaaataa 36035570
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 936 bits (472), Expect = 0.0 Identities = 479/480 (99%), Gaps = 1/480 (0%) Strand = Plus / Minus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47042 catctaggggtaaag-cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 46984 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46983 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 46924 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46923 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 46864 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46863 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 46804 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46803 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 46744 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46743 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 46684 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46683 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 46624 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46623 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 46564
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 936 bits (472), Expect = 0.0 Identities = 479/480 (99%), Gaps = 1/480 (0%) Strand = Plus / Minus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52478 catctaggggtaaag-cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 52420 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52419 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 52360 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52359 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 52300 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52299 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 52240 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52239 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 52180 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52179 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 52120 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52119 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 52060 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52059 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 52000
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 936 bits (472), Expect = 0.0 Identities = 479/480 (99%), Gaps = 1/480 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 468 catctaggggtaaag-cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 526 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 527 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 586 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 587 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 646 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 647 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 706 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 707 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 766 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 767 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 826 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 827 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 886 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 887 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 946
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 936 bits (472), Expect = 0.0 Identities = 479/480 (99%), Gaps = 1/480 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 663 catctaggggtaaag-cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 721 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 722 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 781 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 782 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 841 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 842 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 901 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 902 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 961 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 962 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 1021 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1022 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 1081 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1082 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 1141
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 936 bits (472), Expect = 0.0 Identities = 479/480 (99%), Gaps = 1/480 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 534 catctaggggtaaag-cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 592 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 593 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 652 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 653 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 712 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 772 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 773 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 832 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 833 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 892 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 893 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 952 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 953 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 1012
>dbj|AK059795.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E09, full insert sequence Length = 819 Score = 936 bits (472), Expect = 0.0 Identities = 479/480 (99%), Gaps = 1/480 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 284 catctaggggtaaag-cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 342 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 343 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 402 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 403 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 462 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 463 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 522 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 523 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 582 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 583 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 642 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 643 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 702 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 703 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 762
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 936 bits (472), Expect = 0.0 Identities = 479/480 (99%), Gaps = 1/480 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 663 catctaggggtaaag-cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 721 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 722 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 781 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 782 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 841 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 842 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 901 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 902 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 961 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 962 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 1021 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1022 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 1081 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1082 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 1141
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 936 bits (472), Expect = 0.0 Identities = 479/480 (99%), Gaps = 1/480 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950277 catctaggggtaaag-cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 19950335 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950336 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 19950395 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950396 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 19950455 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950456 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 19950515 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950516 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 19950575 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950576 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 19950635 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950636 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 19950695 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950696 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 19950755 Score = 928 bits (468), Expect = 0.0 Identities = 478/480 (99%), Gaps = 1/480 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393907 catctaggggtaaag-cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 10393965 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393966 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 10394025 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394026 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 10394085 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394086 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 10394145 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394146 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 10394205 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 10394206 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggagagcg 10394265 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394266 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 10394325 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394326 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 10394385 Score = 928 bits (468), Expect = 0.0 Identities = 478/480 (99%), Gaps = 1/480 (0%) Strand = Plus / Minus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282469 catctaggggtaaag-cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 10282411 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282410 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 10282351 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282350 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 10282291 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282290 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 10282231 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282230 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 10282171 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282170 gaacggggctaagcaatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 10282111 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282110 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 10282051 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282050 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 10281991 Score = 77.8 bits (39), Expect = 3e-11 Identities = 39/39 (100%) Strand = Plus / Minus Query: 276 gatcgagcgcccttgcgctgaagatgaacggggctaagc 314 ||||||||||||||||||||||||||||||||||||||| Sbjct: 15841752 gatcgagcgcccttgcgctgaagatgaacggggctaagc 15841714 Score = 54.0 bits (27), Expect = 4e-04 Identities = 85/102 (83%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 45 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 104 ||||||||||||| |||| ||| |||||||||| ||| ||||||||||| ||||||| | Sbjct: 781050 gtaccaaatcgagacaaagtctaaatactagatgtga--caaaaataaca-gggtcaatg 781106 Query: 105 tcggccagtgagacgatgggggataagcttcatcgtcgagag 146 || || ||||||| | ||| ||||| || ||||||||||| Sbjct: 781107 tcagctagtgagatggcgggaaataagttttatcgtcgagag 781148 Score = 48.1 bits (24), Expect = 0.027 Identities = 51/60 (85%) Strand = Plus / Minus Query: 217 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 276 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 2736078 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 2736019
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 936 bits (472), Expect = 0.0 Identities = 479/480 (99%), Gaps = 1/480 (0%) Strand = Plus / Minus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119010 catctaggggtaaag-cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 118952 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118951 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 118892 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118891 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 118832 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118831 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 118772 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118771 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 118712 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118711 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 118652 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118651 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 118592 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118591 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 118532 Score = 936 bits (472), Expect = 0.0 Identities = 479/480 (99%), Gaps = 1/480 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96029 catctaggggtaaag-cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 96087 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96088 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 96147 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96148 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 96207 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96208 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 96267 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96268 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 96327 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96328 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 96387 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96388 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 96447 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96448 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 96507
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 936 bits (472), Expect = 0.0 Identities = 479/480 (99%), Gaps = 1/480 (0%) Strand = Plus / Minus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119202 catctaggggtaaag-cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 119144 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119143 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 119084 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119083 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 119024 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119023 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 118964 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118963 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 118904 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118903 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 118844 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118843 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 118784 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118783 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 118724 Score = 936 bits (472), Expect = 0.0 Identities = 479/480 (99%), Gaps = 1/480 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95692 catctaggggtaaag-cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 95750 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95751 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 95810 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95811 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 95870 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95871 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 95930 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95931 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 95990 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95991 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 96050 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96051 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 96110 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96111 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 96170
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 928 bits (468), Expect = 0.0 Identities = 478/480 (99%), Gaps = 1/480 (0%) Strand = Plus / Minus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117983 catctaggggtaaag-cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 117925 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117924 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 117865 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117864 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 117805 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117804 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 117745 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117744 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 117685 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117684 gaacggggctaagcaatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 117625 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117624 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 117565 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117564 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 117505
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 928 bits (468), Expect = 0.0 Identities = 478/480 (99%), Gaps = 1/480 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94260 catctaggggtaaag-cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 94318 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94319 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 94378 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94379 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 94438 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94439 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 94498 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94499 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 94558 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 94559 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggagagcg 94618 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94619 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 94678 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94679 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 94738
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 928 bits (468), Expect = 0.0 Identities = 478/480 (99%), Gaps = 1/480 (0%) Strand = Plus / Minus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44026 catctaggggtaaag-cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 43968 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43967 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 43908 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43907 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 43848 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43847 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 43788 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43787 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 43728 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43727 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 43668 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 43667 ttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagcgagaatgt 43608 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43607 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 43548 Score = 928 bits (468), Expect = 0.0 Identities = 478/480 (99%), Gaps = 1/480 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21091 catctaggggtaaag-cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 21149 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21150 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 21209 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21210 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 21269 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21270 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 21329 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21330 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 21389 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21390 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 21449 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 21450 ttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagcgagaatgt 21509 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21510 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 21569
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 928 bits (468), Expect = 0.0 Identities = 478/480 (99%), Gaps = 1/480 (0%) Strand = Plus / Minus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57755 catctaggggtaaag-cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 57697 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57696 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 57637 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57636 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 57577 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57576 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 57517 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57516 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 57457 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57456 gaacggggctaagcaatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 57397 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57396 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 57337 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57336 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 57277
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 928 bits (468), Expect = 0.0 Identities = 478/480 (99%), Gaps = 1/480 (0%) Strand = Plus / Minus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 656 catctaggggtaaag-cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 598 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 597 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 538 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 537 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 478 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 477 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 418 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 417 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 358 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 357 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 298 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 297 ttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagcgagaatgt 238 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 237 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 178
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 928 bits (468), Expect = 0.0 Identities = 478/480 (99%), Gaps = 1/480 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28324 catctaggggtaaag-cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 28382 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28383 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 28442 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28443 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 28502 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28503 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 28562 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28563 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 28622 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 28623 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggagagcg 28682 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28683 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 28742 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28743 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 28802
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 928 bits (468), Expect = 0.0 Identities = 478/480 (99%), Gaps = 1/480 (0%) Strand = Plus / Minus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122866 catctaggggtaaag-cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 122808 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122807 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 122748 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122747 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 122688 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122687 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 122628 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122627 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 122568 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122567 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 122508 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 122507 ttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagcgagaatgt 122448 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122447 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 122388 Score = 928 bits (468), Expect = 0.0 Identities = 478/480 (99%), Gaps = 1/480 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99971 catctaggggtaaag-cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 100029 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100030 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 100089 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100090 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 100149 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100150 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 100209 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100210 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 100269 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100270 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 100329 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 100330 ttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagcgagaatgt 100389 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100390 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 100449
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 928 bits (468), Expect = 0.0 Identities = 478/480 (99%), Gaps = 1/480 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 662 catctaggggtaaag-cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 720 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 721 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 780 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 781 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 840 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 841 atgaccgctcagtgatagaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 900 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 901 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 960 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 961 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 1020 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1021 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 1080 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1081 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 1140
>dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B08, full insert sequence Length = 1310 Score = 928 bits (468), Expect = 0.0 Identities = 478/480 (99%), Gaps = 1/480 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 286 catctaggggtaaag-cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 344 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 345 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 404 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 405 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 464 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 465 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 524 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 525 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 584 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 585 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 644 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 645 ttccgccttagagggaagcaaccgcgaaagcgggggttgacgaagcggaagcgagaatgt 704 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 705 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 764
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 928 bits (468), Expect = 0.0 Identities = 478/480 (99%), Gaps = 1/480 (0%) Strand = Plus / Minus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123583 catctaggggtaaag-cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 123525 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123524 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 123465 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123464 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 123405 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123404 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 123345 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123344 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 123285 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123284 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 123225 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 123224 ttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagcgagaatgt 123165 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123164 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 123105 Score = 928 bits (468), Expect = 0.0 Identities = 478/480 (99%), Gaps = 1/480 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100648 catctaggggtaaag-cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 100706 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100707 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 100766 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100767 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 100826 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100827 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 100886 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100887 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 100946 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100947 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 101006 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 101007 ttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagcgagaatgt 101066 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101067 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 101126
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 904 bits (456), Expect = 0.0 Identities = 463/464 (99%), Gaps = 1/464 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526499 catctaggggtaaag-cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 33526557 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526558 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 33526617 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526618 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 33526677 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526678 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 33526737 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526738 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 33526797 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526798 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 33526857 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526858 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 33526917 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 464 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526918 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 33526961 Score = 355 bits (179), Expect = 8e-95 Identities = 206/215 (95%), Gaps = 5/215 (2%) Strand = Plus / Plus Query: 129 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 188 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 527751 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 527810 Query: 189 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 248 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 527811 tcagtgataaaggaggtgggggtgcaaagac-----ggaggtttgcctaaaagcagccac 527865 Query: 249 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 527866 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 527925 Query: 309 ctaagcgatctgccgaagctgtgggatgtcaaaat 343 |||||||||||||| |||||||||||||||||||| Sbjct: 527926 ctaagcgatctgccaaagctgtgggatgtcaaaat 527960 Score = 111 bits (56), Expect = 2e-21 Identities = 115/132 (87%), Gaps = 2/132 (1%) Strand = Plus / Minus Query: 349 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 408 |||||||||| ||||| |||||||||||||| ||| | |||| ||| |||| ||||||| Sbjct: 1076778 ggtaggggagtgttccaccttagagggaagccaccacaaaagtaggg-tcgatgaagcgg 1076720 Query: 409 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 468 | | ||||||||| ||||||||||| ||||||| ||| ||||||||||||| |||||||| Sbjct: 1076719 atgtgagaatgtctgcttgagtaac-aaaacatcggtaagaatccaatgcctcgaaaacc 1076661 Query: 469 caaggtttcctc 480 || ||||||||| Sbjct: 1076660 cagggtttcctc 1076649 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 276 gatcgagcgcccttgcgctgaagatgaacggggctaagcgat 317 |||||||| |||||||||||||||||||| |||||||||||| Sbjct: 9371952 gatcgagcacccttgcgctgaagatgaacagggctaagcgat 9371911 Score = 58.0 bits (29), Expect = 3e-05 Identities = 75/89 (84%), Gaps = 1/89 (1%) Strand = Plus / Minus Query: 345 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 404 ||||||| || ||| |||| |||||| | |||||||||||| ||||| |||||||| || Sbjct: 1076893 catcggttggtgagtgttctgccttaaaaggaagcaaccgcaaaagc-agggtcgacaaa 1076835 Query: 405 gcggaagcgagaatgtcggcttgagtaac 433 | ||||| |||||||| |||| ||||||| Sbjct: 1076834 gtggaagtgagaatgttggctggagtaac 1076806 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 425 ttgagtaacgaaaacattggtgagaatc 452 |||||||||||||||||||||||||||| Sbjct: 33498173 ttgagtaacgaaaacattggtgagaatc 33498146
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 904 bits (456), Expect = 0.0 Identities = 463/464 (99%), Gaps = 1/464 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71696 catctaggggtaaag-cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 71754 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71755 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 71814 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71815 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 71874 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71875 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 71934 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71935 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 71994 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71995 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 72054 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 72055 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 72114 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 464 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 72115 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 72158 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 425 ttgagtaacgaaaacattggtgagaatc 452 |||||||||||||||||||||||||||| Sbjct: 43370 ttgagtaacgaaaacattggtgagaatc 43343
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 868 bits (438), Expect = 0.0 Identities = 445/446 (99%), Gaps = 1/446 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 665 catctaggggtaaag-cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 723 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 724 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 783 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 784 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 843 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 844 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 903 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 904 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 963 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 964 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 1023 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1024 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 1083 Query: 421 cggcttgagtaacgaaaacattggtg 446 |||||||||||||||||||||||||| Sbjct: 1084 cggcttgagtaacgaaaacattggtg 1109
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 864 bits (436), Expect = 0.0 Identities = 472/480 (98%), Gaps = 3/480 (0%) Strand = Plus / Minus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 122806 catctaggggtaaag-cactgtttcggtgcgg-ctgcgcgagcggtaccaaatcgaggca 122749 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122748 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 122689 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 122688 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctta 122629 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 122628 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccatgaggtttgcctagaa 122569 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| Sbjct: 122568 gcagccaccctttaaagagtgcgtaatagctcactga-ctggcgcccttgcgctgaagat 122510 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122509 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 122450 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 122449 ttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagcgagaatgt 122390 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122389 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 122330 Score = 864 bits (436), Expect = 0.0 Identities = 472/480 (98%), Gaps = 3/480 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 99931 catctaggggtaaag-cactgtttcggtgcgg-ctgcgcgagcggtaccaaatcgaggca 99988 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99989 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 100048 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 100049 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctta 100108 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 100109 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccatgaggtttgcctagaa 100168 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| Sbjct: 100169 gcagccaccctttaaagagtgcgtaatagctcactga-ctggcgcccttgcgctgaagat 100227 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100228 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 100287 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 100288 ttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagcgagaatgt 100347 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100348 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 100407
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 864 bits (436), Expect = 0.0 Identities = 472/480 (98%), Gaps = 3/480 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 6284 catctaggggtaaag-cactgtttcggtgcgg-ctgcgcgagcggtaccaaatcgaggca 6341 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6342 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 6401 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 6402 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctta 6461 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 6462 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccatgaggtttgcctagaa 6521 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| Sbjct: 6522 gcagccaccctttaaagagtgcgtaatagctcactga-ctggcgcccttgcgctgaagat 6580 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6581 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 6640 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 6641 ttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagcgagaatgt 6700 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6701 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 6760
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 864 bits (436), Expect = 0.0 Identities = 472/480 (98%), Gaps = 3/480 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 872 catctaggggtaaag-cactgtttcggtgcgg-ctgcgcgagcggtaccaaatcgaggca 929 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 930 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 989 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 990 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctta 1049 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1050 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccatgaggtttgcctagaa 1109 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| Sbjct: 1110 gcagccaccctttaaagagtgcgtaatagctcactga-ctggcgcccttgcgctgaagat 1168 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1169 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 1228 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1229 ttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagcgagaatgt 1288 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1289 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 1348
>gb|DQ078770.1| Zea mays clone Zmcoi6.13 cold-inducible unknown mRNA Length = 519 Score = 852 bits (430), Expect = 0.0 Identities = 433/434 (99%) Strand = Plus / Minus Query: 47 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 519 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 460 Query: 107 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 459 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 400 Query: 167 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 399 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 340 Query: 227 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 339 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 280 Query: 287 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgca 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 279 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgca 220 Query: 347 tcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagc 406 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 219 tcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagc 160 Query: 407 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 159 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 100 Query: 467 cccaaggtttcctc 480 |||||||||||||| Sbjct: 99 cccaaggtttcctc 86
>dbj|AK105766.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E02, full insert sequence Length = 2146 Score = 825 bits (416), Expect = 0.0 Identities = 416/416 (100%) Strand = Plus / Plus Query: 65 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 60 Query: 125 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 120 Query: 185 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 180 Query: 245 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 240 Query: 305 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 300 Query: 365 gccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 360 Query: 425 ttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 416
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 793 bits (400), Expect = 0.0 Identities = 461/480 (96%), Gaps = 1/480 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 859 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 917 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 918 aactctgaatactagatatgacctcaaaataactggggtcaaggtcggccagtgagacgg 977 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 978 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 1037 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 1038 atgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaa 1097 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 1098 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 1157 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1158 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 1217 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||||||||||| |||||||||||||| ||||| ||| |||||||||||||||||||||| Sbjct: 1218 ttccgccttagggggaagcaaccgcgcgagcggcggtggacgaagcggaagcgagaatgt 1277 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1278 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaagggttcctc 1337
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 793 bits (400), Expect = 0.0 Identities = 461/480 (96%), Gaps = 1/480 (0%) Strand = Plus / Minus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 132138 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 132080 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 132079 aactctgaatactagatatgacctcaaaataactggggtcaaggtcggccagtgagacgg 132020 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132019 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 131960 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 131959 atgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaa 131900 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 131899 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 131840 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131839 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 131780 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||||||||||| |||||||||||||| ||||| ||| |||||||||||||||||||||| Sbjct: 131779 ttccgccttagggggaagcaaccgcgcgagcggcggtggacgaagcggaagcgagaatgt 131720 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 131719 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaagggttcctc 131660 Score = 793 bits (400), Expect = 0.0 Identities = 461/480 (96%), Gaps = 1/480 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 104626 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 104684 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 104685 aactctgaatactagatatgacctcaaaataactggggtcaaggtcggccagtgagacgg 104744 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104745 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 104804 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 104805 atgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaa 104864 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 104865 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 104924 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104925 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 104984 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||||||||||| |||||||||||||| ||||| ||| |||||||||||||||||||||| Sbjct: 104985 ttccgccttagggggaagcaaccgcgcgagcggcggtggacgaagcggaagcgagaatgt 105044 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 105045 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaagggttcctc 105104
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 793 bits (400), Expect = 0.0 Identities = 461/480 (96%), Gaps = 1/480 (0%) Strand = Plus / Minus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 133099 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 133041 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 133040 aactctgaatactagatatgacctcaaaataactggggtcaaggtcggccagtgagacgg 132981 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132980 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 132921 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 132920 atgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaa 132861 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 132860 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 132801 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132800 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 132741 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||||||||||| |||||||||||||| ||||| ||| |||||||||||||||||||||| Sbjct: 132740 ttccgccttagggggaagcaaccgcgcgagcggcggtggacgaagcggaagcgagaatgt 132681 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 132680 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaagggttcctc 132621 Score = 793 bits (400), Expect = 0.0 Identities = 461/480 (96%), Gaps = 1/480 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 105550 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 105608 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 105609 aactctgaatactagatatgacctcaaaataactggggtcaaggtcggccagtgagacgg 105668 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105669 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 105728 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 105729 atgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaa 105788 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 105789 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 105848 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105849 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 105908 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||||||||||| |||||||||||||| ||||| ||| |||||||||||||||||||||| Sbjct: 105909 ttccgccttagggggaagcaaccgcgcgagcggcggtggacgaagcggaagcgagaatgt 105968 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 105969 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaagggttcctc 106028
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 785 bits (396), Expect = 0.0 Identities = 460/480 (95%), Gaps = 1/480 (0%) Strand = Plus / Minus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 138644 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 138586 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| Sbjct: 138585 aactctgaatactagatatgacctcaaaataacaggggtcgaggtcggccagtgagacga 138526 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138525 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 138466 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 138465 atgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaa 138406 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 138405 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 138346 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 138345 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcg 138286 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||||||||||| |||||||| ||||| |||||| || |||||||||||||||||||||| Sbjct: 138285 ttccgccttagggggaagcacccgcgtgagcgggagtagacgaagcggaagcgagaatgt 138226 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 138225 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaagggttcctc 138166 Score = 785 bits (396), Expect = 0.0 Identities = 460/480 (95%), Gaps = 1/480 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 110453 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 110511 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| Sbjct: 110512 aactctgaatactagatatgacctcaaaataacaggggtcgaggtcggccagtgagacga 110571 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110572 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 110631 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 110632 atgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaa 110691 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 110692 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 110751 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 110752 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcg 110811 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||||||||||| |||||||| ||||| |||||| || |||||||||||||||||||||| Sbjct: 110812 ttccgccttagggggaagcacccgcgtgagcgggagtagacgaagcggaagcgagaatgt 110871 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 110872 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaagggttcctc 110931
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 777 bits (392), Expect = 0.0 Identities = 459/480 (95%), Gaps = 1/480 (0%) Strand = Plus / Minus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 141247 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 141189 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 141188 aactctgaatactagatatgaccccaaaataacaggggtaaaggtcggccagtgagacga 141129 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141128 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 141069 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 141068 atgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaa 141009 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 141008 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 140949 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 140948 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcg 140889 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||||||||||||| |||||| ||||| ||| || || |||||||||||||||||||||| Sbjct: 140888 ttccgccttagagtgaagcacccgcgcgagcaggtgtggacgaagcggaagcgagaatgt 140829 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 140828 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 140769 Score = 777 bits (392), Expect = 0.0 Identities = 459/480 (95%), Gaps = 1/480 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 112410 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 112468 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 112469 aactctgaatactagatatgaccccaaaataacaggggtaaaggtcggccagtgagacga 112528 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112529 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 112588 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 112589 atgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaa 112648 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 112649 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 112708 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 112709 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcg 112768 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||||||||||||| |||||| ||||| ||| || || |||||||||||||||||||||| Sbjct: 112769 ttccgccttagagtgaagcacccgcgcgagcaggtgtggacgaagcggaagcgagaatgt 112828 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 112829 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 112888
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 777 bits (392), Expect = 0.0 Identities = 459/480 (95%), Gaps = 1/480 (0%) Strand = Plus / Minus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 138849 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 138791 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| Sbjct: 138790 aactctgaatactagatatgacctccaaataataggggtcaaggtcggccagtgagacga 138731 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138730 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 138671 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 138670 atgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaa 138611 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 138610 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 138551 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 138550 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcg 138491 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 |||||||||||||||||||| |||||| ||| ||||| |||||||||||||||||||||| Sbjct: 138490 ttccgccttagagggaagcacccgcgagagcaggggtggacgaagcggaagcgagaatgt 138431 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 138430 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 138371 Score = 777 bits (392), Expect = 0.0 Identities = 459/480 (95%), Gaps = 1/480 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 110450 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 110508 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| Sbjct: 110509 aactctgaatactagatatgacctccaaataataggggtcaaggtcggccagtgagacga 110568 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110569 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 110628 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 110629 atgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaa 110688 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 110689 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 110748 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 110749 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcg 110808 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 |||||||||||||||||||| |||||| ||| ||||| |||||||||||||||||||||| Sbjct: 110809 ttccgccttagagggaagcacccgcgagagcaggggtggacgaagcggaagcgagaatgt 110868 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 110869 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 110928
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 775 bits (391), Expect = 0.0 Identities = 459/480 (95%), Gaps = 5/480 (1%) Strand = Plus / Minus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 127003 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 126945 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 126944 aactctgaatactagatatgaccccaaa----caggggtcaaggtcggccagtgagacga 126889 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126888 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 126829 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 126828 atgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaa 126769 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 126768 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 126709 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126708 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 126649 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 |||||||||||||||||||| ||||| |||| || || |||||||||||||||||||||| Sbjct: 126648 ttccgccttagagggaagcacccgcgcaagcaggtgtggacgaagcggaagcgagaatgt 126589 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 126588 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 126529 Score = 775 bits (391), Expect = 0.0 Identities = 459/480 (95%), Gaps = 5/480 (1%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 107919 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 107977 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 107978 aactctgaatactagatatgaccccaaa----caggggtcaaggtcggccagtgagacga 108033 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108034 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 108093 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 108094 atgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaa 108153 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 108154 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 108213 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108214 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 108273 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 |||||||||||||||||||| ||||| |||| || || |||||||||||||||||||||| Sbjct: 108274 ttccgccttagagggaagcacccgcgcaagcaggtgtggacgaagcggaagcgagaatgt 108333 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 108334 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 108393
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 769 bits (388), Expect = 0.0 Identities = 458/480 (95%), Gaps = 1/480 (0%) Strand = Plus / Minus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 130807 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 130749 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 130748 aactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgagacga 130689 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130688 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 130629 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 130628 atgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaa 130569 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 130568 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 130509 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 130508 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcg 130449 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||||||||||||| |||||| ||||| ||||| || |||||||||||||||||||||| Sbjct: 130448 ttccgccttagagtgaagcacccgcgcgagcggtagtggacgaagcggaagcgagaatgt 130389 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 130388 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 130329 Score = 769 bits (388), Expect = 0.0 Identities = 458/480 (95%), Gaps = 1/480 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 103828 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 103886 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 103887 aactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgagacga 103946 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103947 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 104006 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 104007 atgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaa 104066 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 104067 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 104126 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 104127 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcg 104186 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||||||||||||| |||||| ||||| ||||| || |||||||||||||||||||||| Sbjct: 104187 ttccgccttagagtgaagcacccgcgcgagcggtagtggacgaagcggaagcgagaatgt 104246 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 104247 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 104306
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 769 bits (388), Expect = 0.0 Identities = 459/480 (95%), Gaps = 2/480 (0%) Strand = Plus / Minus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 133362 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 133304 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| Sbjct: 133303 aactctgaatactagatatgacccaaaaatcacaggg-tcaaggtcggccagtgagacga 133245 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133244 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 133185 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 133184 atgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaa 133125 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 || ||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 133124 gccgccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 133065 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 133064 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcg 133005 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||||||||||||| |||||| ||||| |||| || || |||||||||||||||||||||| Sbjct: 133004 ttccgccttagagagaagcacccgcgcaagcaggtgtggacgaagcggaagcgagaatgt 132945 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 132944 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 132885 Score = 769 bits (388), Expect = 0.0 Identities = 459/480 (95%), Gaps = 2/480 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 104609 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 104667 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| Sbjct: 104668 aactctgaatactagatatgacccaaaaatcacaggg-tcaaggtcggccagtgagacga 104726 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104727 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 104786 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 104787 atgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaa 104846 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 || ||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 104847 gccgccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 104906 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 104907 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcg 104966 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||||||||||||| |||||| ||||| |||| || || |||||||||||||||||||||| Sbjct: 104967 ttccgccttagagagaagcacccgcgcaagcaggtgtggacgaagcggaagcgagaatgt 105026 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 105027 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 105086
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 761 bits (384), Expect = 0.0 Identities = 457/480 (95%), Gaps = 1/480 (0%) Strand = Plus / Minus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 131915 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 131857 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 131856 aactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgagacga 131797 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131796 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 131737 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 131736 atgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaa 131677 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 131676 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 131617 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 131616 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcg 131557 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||||||||||||| |||||| ||||| ||||| || |||||||||||||||||||||| Sbjct: 131556 ttccgccttagagtgaagcacccgcgcgagcggtagtggacgaagcggaagcgagaatgt 131497 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 131496 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 131437 Score = 761 bits (384), Expect = 0.0 Identities = 457/480 (95%), Gaps = 1/480 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 104963 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 105021 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 105022 aactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgagacga 105081 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105082 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 105141 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 105142 atgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaa 105201 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 105202 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 105261 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 105262 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcg 105321 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||||||||||||| |||||| ||||| ||||| || |||||||||||||||||||||| Sbjct: 105322 ttccgccttagagtgaagcacccgcgcgagcggtagtggacgaagcggaagcgagaatgt 105381 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 105382 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 105441
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 761 bits (384), Expect = 0.0 Identities = 457/480 (95%), Gaps = 1/480 (0%) Strand = Plus / Minus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 135041 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 134983 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 134982 aactctgaatactagatatgatctcaaaataacaggggtcaaggtcggccagtgagacga 134923 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134922 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 134863 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 134862 atgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaa 134803 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 134802 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 134743 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 134742 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcg 134683 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 |||||||||||||||||||| | ||| ||| | || |||||||||||||||||||||| Sbjct: 134682 ttccgccttagagggaagcacctgcgcgagcagttgtggacgaagcggaagcgagaatgt 134623 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 134622 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 134563 Score = 761 bits (384), Expect = 0.0 Identities = 457/480 (95%), Gaps = 1/480 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 106865 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 106923 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 106924 aactctgaatactagatatgatctcaaaataacaggggtcaaggtcggccagtgagacga 106983 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106984 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 107043 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 107044 atgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaa 107103 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 107104 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 107163 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 107164 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcg 107223 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 |||||||||||||||||||| | ||| ||| | || |||||||||||||||||||||| Sbjct: 107224 ttccgccttagagggaagcacctgcgcgagcagttgtggacgaagcggaagcgagaatgt 107283 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 107284 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 107343
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 761 bits (384), Expect = 0.0 Identities = 457/480 (95%), Gaps = 1/480 (0%) Strand = Plus / Minus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 135732 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 135674 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| Sbjct: 135673 aactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacga 135614 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135613 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 135554 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 135553 atgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaa 135494 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 135493 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 135434 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 135433 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcg 135374 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 |||||||||||||||||| | ||||| ||||| || |||||||||||||||||||||| Sbjct: 135373 ttccgccttagagggaagtacccgcgcgagcggtagtggacgaagcggaagcgagaatgt 135314 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 135313 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 135254 Score = 761 bits (384), Expect = 0.0 Identities = 457/480 (95%), Gaps = 1/480 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 106693 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 106751 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| Sbjct: 106752 aactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacga 106811 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106812 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 106871 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 106872 atgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaa 106931 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 106932 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 106991 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 106992 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcg 107051 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 |||||||||||||||||| | ||||| ||||| || |||||||||||||||||||||| Sbjct: 107052 ttccgccttagagggaagtacccgcgcgagcggtagtggacgaagcggaagcgagaatgt 107111 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 107112 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 107171
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 761 bits (384), Expect = 0.0 Identities = 457/480 (95%), Gaps = 1/480 (0%) Strand = Plus / Minus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 135320 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 135262 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 135261 aactctgaatactagatatgatctcaaaataacaggggtcaaggtcggccagtgagacga 135202 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135201 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 135142 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 135141 atgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaa 135082 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 135081 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 135022 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 135021 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcg 134962 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 |||||||||||||||||||| | ||| ||| | || |||||||||||||||||||||| Sbjct: 134961 ttccgccttagagggaagcacctgcgcgagcagttgtggacgaagcggaagcgagaatgt 134902 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 134901 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 134842 Score = 761 bits (384), Expect = 0.0 Identities = 457/480 (95%), Gaps = 1/480 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 107087 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 107145 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 107146 aactctgaatactagatatgatctcaaaataacaggggtcaaggtcggccagtgagacga 107205 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107206 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 107265 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 107266 atgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaa 107325 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 107326 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 107385 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 107386 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcg 107445 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 |||||||||||||||||||| | ||| ||| | || |||||||||||||||||||||| Sbjct: 107446 ttccgccttagagggaagcacctgcgcgagcagttgtggacgaagcggaagcgagaatgt 107505 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 107506 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 107565
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 761 bits (384), Expect = 0.0 Identities = 457/480 (95%), Gaps = 1/480 (0%) Strand = Plus / Minus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 131908 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 131850 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 131849 aactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgagacga 131790 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131789 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 131730 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 131729 atgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaa 131670 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 131669 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 131610 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 131609 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcg 131550 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||||||||||||| |||||| ||||| ||||| || |||||||||||||||||||||| Sbjct: 131549 ttccgccttagagtgaagcacccgcgcgagcggtagtggacgaagcggaagcgagaatgt 131490 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 131489 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 131430 Score = 761 bits (384), Expect = 0.0 Identities = 457/480 (95%), Gaps = 1/480 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 104961 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 105019 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 105020 aactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgagacga 105079 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105080 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 105139 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 105140 atgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaa 105199 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 105200 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 105259 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 105260 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcg 105319 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||||||||||||| |||||| ||||| ||||| || |||||||||||||||||||||| Sbjct: 105320 ttccgccttagagtgaagcacccgcgcgagcggtagtggacgaagcggaagcgagaatgt 105379 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 105380 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 105439
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 761 bits (384), Expect = 0.0 Identities = 457/480 (95%), Gaps = 1/480 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 861 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 919 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 920 aactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgagacga 979 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 980 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 1039 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 1040 atgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaa 1099 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 1100 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 1159 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| Sbjct: 1160 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaaggcatcggtaggggagcg 1219 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||||||||||| |||||||| | ||| ||| | ||| |||||||||||||||||||||| Sbjct: 1220 ttccgccttagggggaagcacctgcgcgagcagcggtagacgaagcggaagcgagaatgt 1279 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 1280 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 1339
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 755 bits (381), Expect = 0.0 Identities = 460/485 (94%), Gaps = 6/485 (1%) Strand = Plus / Minus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 138725 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 138667 Query: 61 aactctgaatactagatatgaccc-----aaaaataacaggggtcaaggtcggccagtga 115 |||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 138666 aactctgaatactagatatgaccccaaaacaaaataacaggggtcaaggtcggccagtga 138607 Query: 116 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 175 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138606 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 138547 Query: 176 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 235 |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 138546 cctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcc 138487 Query: 236 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 295 ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| | Sbjct: 138486 tagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccg 138427 Query: 296 aagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggg 355 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 138426 aagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggg 138367 Query: 356 gagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgag 415 |||||||||||||||||| |||||| ||||| ||| || || ||||||||||||||||| Sbjct: 138366 gagcgttccgccttagagtgaagcacccgcgcgagcaggtgtggacgaagcggaagcgag 138307 Query: 416 aatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtt 475 ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| | Sbjct: 138306 aatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggt 138247 Query: 476 tcctc 480 ||||| Sbjct: 138246 tcctc 138242 Score = 755 bits (381), Expect = 0.0 Identities = 460/485 (94%), Gaps = 6/485 (1%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 111220 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 111278 Query: 61 aactctgaatactagatatgaccc-----aaaaataacaggggtcaaggtcggccagtga 115 |||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 111279 aactctgaatactagatatgaccccaaaacaaaataacaggggtcaaggtcggccagtga 111338 Query: 116 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 175 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111339 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 111398 Query: 176 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 235 |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 111399 cctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcc 111458 Query: 236 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 295 ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| | Sbjct: 111459 tagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccg 111518 Query: 296 aagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggg 355 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 111519 aagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggg 111578 Query: 356 gagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgag 415 |||||||||||||||||| |||||| ||||| ||| || || ||||||||||||||||| Sbjct: 111579 gagcgttccgccttagagtgaagcacccgcgcgagcaggtgtggacgaagcggaagcgag 111638 Query: 416 aatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtt 475 ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| | Sbjct: 111639 aatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggt 111698 Query: 476 tcctc 480 ||||| Sbjct: 111699 tcctc 111703
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 753 bits (380), Expect = 0.0 Identities = 456/480 (95%), Gaps = 1/480 (0%) Strand = Plus / Minus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 135440 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 135382 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| Sbjct: 135381 aactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacga 135322 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135321 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 135262 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 135261 atgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaa 135202 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 135201 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 135142 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 135141 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcg 135082 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||||||||||||| ||||| ||||| ||||| ||| |||||||||||||||||||||| Sbjct: 135081 ttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgt 135022 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 135021 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 134962 Score = 753 bits (380), Expect = 0.0 Identities = 456/480 (95%), Gaps = 1/480 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 107190 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 107248 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| Sbjct: 107249 aactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacga 107308 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107309 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 107368 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 107369 atgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaa 107428 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 107429 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 107488 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 107489 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcg 107548 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||||||||||||| ||||| ||||| ||||| ||| |||||||||||||||||||||| Sbjct: 107549 ttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgt 107608 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 107609 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 107668
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 753 bits (380), Expect = 0.0 Identities = 456/480 (95%), Gaps = 1/480 (0%) Strand = Plus / Minus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 136078 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 136020 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| Sbjct: 136019 aactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacga 135960 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135959 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 135900 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 135899 atgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaa 135840 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 135839 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 135780 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 135779 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcg 135720 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 |||||||||| || ||||| ||||| ||||| ||| |||||||||||||||||||||| Sbjct: 135719 ttccgccttatagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgt 135660 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 135659 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 135600 Score = 753 bits (380), Expect = 0.0 Identities = 456/480 (95%), Gaps = 1/480 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 107479 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 107537 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| Sbjct: 107538 aactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacga 107597 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107598 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 107657 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 107658 atgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaa 107717 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 107718 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 107777 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 107778 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcg 107837 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 |||||||||| || ||||| ||||| ||||| ||| |||||||||||||||||||||| Sbjct: 107838 ttccgccttatagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgt 107897 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 107898 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 107957
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 753 bits (380), Expect = 0.0 Identities = 456/480 (95%), Gaps = 1/480 (0%) Strand = Plus / Minus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 142019 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 141961 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| Sbjct: 141960 aactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacga 141901 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141900 tgggggataagcttgatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 141841 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 141840 atgatcgctcagtgataaaggaggtaggggtgcaaagacagccaggaggtttgcctagaa 141781 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 141780 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 141721 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 141720 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcg 141661 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||||||||||||| ||||| ||||| ||||| ||| |||||||||||||||||||||| Sbjct: 141660 ttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgt 141601 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 141600 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 141541 Score = 753 bits (380), Expect = 0.0 Identities = 456/480 (95%), Gaps = 1/480 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 111309 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 111367 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| Sbjct: 111368 aactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacga 111427 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111428 tgggggataagcttgatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 111487 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 111488 atgatcgctcagtgataaaggaggtaggggtgcaaagacagccaggaggtttgcctagaa 111547 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 111548 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 111607 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 111608 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcg 111667 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||||||||||||| ||||| ||||| ||||| ||| |||||||||||||||||||||| Sbjct: 111668 ttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgt 111727 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 111728 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 111787
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 753 bits (380), Expect = 0.0 Identities = 456/480 (95%), Gaps = 1/480 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 2384 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 2442 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| Sbjct: 2443 aactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacga 2502 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2503 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 2562 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 2563 atgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaa 2622 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 2623 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 2682 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 2683 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcg 2742 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||||||||||||| ||||| ||||| ||||| ||| |||||||||||||||||||||| Sbjct: 2743 ttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgt 2802 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 2803 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 2862
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 753 bits (380), Expect = 0.0 Identities = 456/480 (95%), Gaps = 1/480 (0%) Strand = Plus / Minus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 134686 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 134628 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| Sbjct: 134627 aactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacga 134568 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134567 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 134508 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 134507 atgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaa 134448 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 134447 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 134388 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 134387 gaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggtaggggagcg 134328 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||||||||||||| ||||| ||||| ||||| ||| |||||||||||||||||||||| Sbjct: 134327 ttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgt 134268 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 134267 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 134208 Score = 753 bits (380), Expect = 0.0 Identities = 456/480 (95%), Gaps = 1/480 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 106350 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 106408 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| Sbjct: 106409 aactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacga 106468 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106469 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 106528 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 106529 atgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaa 106588 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 106589 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 106648 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 106649 gaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggtaggggagcg 106708 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||||||||||||| ||||| ||||| ||||| ||| |||||||||||||||||||||| Sbjct: 106709 ttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgt 106768 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 106769 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 106828
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 753 bits (380), Expect = 0.0 Identities = 456/480 (95%), Gaps = 1/480 (0%) Strand = Plus / Minus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 134821 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 134763 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| Sbjct: 134762 aactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacga 134703 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134702 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 134643 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 134642 atgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaa 134583 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 134582 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 134523 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 134522 gaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggtaggggagcg 134463 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||||||||||||| ||||| ||||| ||||| ||| |||||||||||||||||||||| Sbjct: 134462 ttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgt 134403 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 134402 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 134343 Score = 753 bits (380), Expect = 0.0 Identities = 456/480 (95%), Gaps = 1/480 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 106522 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 106580 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| Sbjct: 106581 aactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacga 106640 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106641 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 106700 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 106701 atgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaa 106760 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 106761 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 106820 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 106821 gaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggtaggggagcg 106880 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||||||||||||| ||||| ||||| ||||| ||| |||||||||||||||||||||| Sbjct: 106881 ttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgt 106940 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 106941 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 107000
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 753 bits (380), Expect = 0.0 Identities = 456/480 (95%), Gaps = 1/480 (0%) Strand = Plus / Minus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 134819 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 134761 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| Sbjct: 134760 aactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacga 134701 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134700 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 134641 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 134640 atgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaa 134581 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 134580 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 134521 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 134520 gaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggtaggggagcg 134461 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||||||||||||| ||||| ||||| ||||| ||| |||||||||||||||||||||| Sbjct: 134460 ttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgt 134401 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 134400 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 134341 Score = 753 bits (380), Expect = 0.0 Identities = 456/480 (95%), Gaps = 1/480 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 106519 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 106577 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| Sbjct: 106578 aactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacga 106637 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106638 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 106697 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 106698 atgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaa 106757 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 106758 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 106817 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 106818 gaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggtaggggagcg 106877 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||||||||||||| ||||| ||||| ||||| ||| |||||||||||||||||||||| Sbjct: 106878 ttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgt 106937 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 106938 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 106997
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 753 bits (380), Expect = 0.0 Identities = 456/480 (95%), Gaps = 1/480 (0%) Strand = Plus / Minus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 134731 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 134673 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| Sbjct: 134672 aactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacga 134613 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134612 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 134553 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 134552 atgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaa 134493 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 134492 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 134433 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 134432 gaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggtaggggagcg 134373 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||||||||||||| ||||| ||||| ||||| ||| |||||||||||||||||||||| Sbjct: 134372 ttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgt 134313 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 134312 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 134253 Score = 753 bits (380), Expect = 0.0 Identities = 456/480 (95%), Gaps = 1/480 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 106397 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 106455 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| Sbjct: 106456 aactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacga 106515 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106516 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 106575 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 106576 atgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaa 106635 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 106636 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 106695 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 106696 gaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggtaggggagcg 106755 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||||||||||||| ||||| ||||| ||||| ||| |||||||||||||||||||||| Sbjct: 106756 ttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgt 106815 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 106816 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 106875
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 753 bits (380), Expect = 0.0 Identities = 456/480 (95%), Gaps = 1/480 (0%) Strand = Plus / Minus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 135438 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 135380 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| Sbjct: 135379 aactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacga 135320 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135319 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 135260 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 135259 atgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaa 135200 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 135199 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 135140 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 135139 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcg 135080 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||||||||||||| ||||| ||||| ||||| ||| |||||||||||||||||||||| Sbjct: 135079 ttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgt 135020 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 135019 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 134960 Score = 753 bits (380), Expect = 0.0 Identities = 456/480 (95%), Gaps = 1/480 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 107188 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 107246 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| Sbjct: 107247 aactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacga 107306 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107307 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 107366 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 107367 atgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaa 107426 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 107427 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 107486 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 107487 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcg 107546 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||||||||||||| ||||| ||||| ||||| ||| |||||||||||||||||||||| Sbjct: 107547 ttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgt 107606 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 107607 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 107666
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 753 bits (380), Expect = 0.0 Identities = 456/480 (95%), Gaps = 1/480 (0%) Strand = Plus / Minus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 135169 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 135111 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| Sbjct: 135110 aactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacga 135051 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135050 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 134991 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 134990 atgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaa 134931 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 134930 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 134871 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 134870 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcg 134811 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||||||||||||| ||||| ||||| ||||| ||| |||||||||||||||||||||| Sbjct: 134810 ttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgt 134751 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 134750 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 134691 Score = 753 bits (380), Expect = 0.0 Identities = 456/480 (95%), Gaps = 1/480 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 106969 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 107027 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| Sbjct: 107028 aactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacga 107087 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107088 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 107147 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 107148 atgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaa 107207 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 107208 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 107267 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 107268 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcg 107327 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||||||||||||| ||||| ||||| ||||| ||| |||||||||||||||||||||| Sbjct: 107328 ttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgt 107387 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 107388 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 107447
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 753 bits (380), Expect = 0.0 Identities = 456/480 (95%), Gaps = 1/480 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 957 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 1015 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| Sbjct: 1016 aactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacga 1075 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1076 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 1135 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 1136 atgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaa 1195 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 1196 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 1255 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 1256 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcg 1315 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||||||||||||| ||||| ||||| ||||| ||| |||||||||||||||||||||| Sbjct: 1316 ttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgt 1375 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 1376 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 1435
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 745 bits (376), Expect = 0.0 Identities = 455/480 (94%), Gaps = 1/480 (0%) Strand = Plus / Minus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 134698 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 134640 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 ||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||||| Sbjct: 134639 aactctgaataatagatatgacctcaaaataacaggggtcaaggtcggctagtgagacga 134580 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134579 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 134520 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 134519 atgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaa 134460 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 134459 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 134400 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 134399 gaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggtaggggagcg 134340 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||||||||||||| ||||| ||||| ||||| ||| |||||||||||||||||||||| Sbjct: 134339 ttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgt 134280 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 134279 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 134220 Score = 745 bits (376), Expect = 0.0 Identities = 455/480 (94%), Gaps = 1/480 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 106364 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 106422 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 ||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||||| Sbjct: 106423 aactctgaataatagatatgacctcaaaataacaggggtcaaggtcggctagtgagacga 106482 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106483 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 106542 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 106543 atgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaa 106602 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 106603 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 106662 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 106663 gaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggtaggggagcg 106722 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||||||||||||| ||||| ||||| ||||| ||| |||||||||||||||||||||| Sbjct: 106723 ttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgt 106782 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 106783 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 106842
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 737 bits (372), Expect = 0.0 Identities = 455/480 (94%), Gaps = 2/480 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 2630 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 2688 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 |||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||| Sbjct: 2689 aactctgaatactagatatgactcaaaa-taacaggggtcaaggtcggctagtgagacga 2747 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 2748 tgggggataagcttcatcgtcgagagggaaacagtccggatcaccagctaaggcccctaa 2807 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 2808 atgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaa 2867 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| ||||||||||||||||| |||||||||||||| ||||||| |||||| Sbjct: 2868 gcagccacccttgaaagagtgcgtaatagcscactgatcgagcgctcttgcgccgaagat 2927 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 2928 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcg 2987 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||||||||||||| ||||| ||||| ||||| ||| |||||||||||||||||||||| Sbjct: 2988 ttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgt 3047 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 3048 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 3107
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 737 bits (372), Expect = 0.0 Identities = 454/480 (94%), Gaps = 1/480 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 857 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 915 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 916 aactctgaatactagatatgacctcaaaataacaggggttaaggtcggccagtgagacga 975 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 976 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 1035 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1036 atgaccgctcagtgataaaggaggtaggggtgcaaagacagccaggaggtttgcctagaa 1095 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 1096 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 1155 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| Sbjct: 1156 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatccgtaggggagcg 1215 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 |||||||||| ||||||||||||||| ||| |||| |||||||||||||||| ||||| Sbjct: 1216 ttccgccttaaagggaagcaaccgcgccagcaagggtggacgaagcggaagcgaaaatgt 1275 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 | |||||||||||| ||||||||||||||||| |||||||| |||| | |||| |||||| Sbjct: 1276 ccgcttgagtaacgcaaacattggtgagaatctaatgcccccaaaaactaagggttcctc 1335
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 731 bits (369), Expect = 0.0 Identities = 376/377 (99%), Gaps = 1/377 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 484 catctaggggtaaag-cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 542 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 543 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 602 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 603 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 662 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 663 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 722 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 723 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 782 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 783 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 842 Query: 361 ttccgccttagagggaa 377 ||||||||||||||||| Sbjct: 843 ttccgccttagagggaa 859
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 729 bits (368), Expect = 0.0 Identities = 453/480 (94%), Gaps = 1/480 (0%) Strand = Plus / Minus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 131007 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 130949 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| Sbjct: 130948 aactctgaatactagatatgacctcaaaataacaagggtcaaggtcggccagtgagacga 130889 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130888 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 130829 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 ||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||| Sbjct: 130828 atgaccgctcagtgataaaggaggtaggggtgcagagacaaccaggaggtttgcctagaa 130769 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 130768 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 130709 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||| Sbjct: 130708 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaaagaatcggtaggggagcg 130649 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 |||||||||||||||||| | ||||| ||| | | | |||||||||||||||||||||| Sbjct: 130648 ttccgccttagagggaaggacccgcgcgagcagtgctggacgaagcggaagcgagaatgt 130589 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||| |||| ||||||||||||||||||| ||||||||||||| |||||| Sbjct: 130588 cggcttgagtaacgcaaacgttggtgagaatccaatgcctcgaaaacccaagggttcctc 130529 Score = 729 bits (368), Expect = 0.0 Identities = 453/480 (94%), Gaps = 1/480 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 104387 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 104445 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| Sbjct: 104446 aactctgaatactagatatgacctcaaaataacaagggtcaaggtcggccagtgagacga 104505 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104506 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 104565 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 ||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||| Sbjct: 104566 atgaccgctcagtgataaaggaggtaggggtgcagagacaaccaggaggtttgcctagaa 104625 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 104626 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 104685 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||| Sbjct: 104686 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaaagaatcggtaggggagcg 104745 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 |||||||||||||||||| | ||||| ||| | | | |||||||||||||||||||||| Sbjct: 104746 ttccgccttagagggaaggacccgcgcgagcagtgctggacgaagcggaagcgagaatgt 104805 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||| |||| ||||||||||||||||||| ||||||||||||| |||||| Sbjct: 104806 cggcttgagtaacgcaaacgttggtgagaatccaatgcctcgaaaacccaagggttcctc 104865
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 722 bits (364), Expect = 0.0 Identities = 452/480 (94%), Gaps = 1/480 (0%) Strand = Plus / Minus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 129670 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 129612 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 ||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||| Sbjct: 129611 aactctgaatactagatatgacctgaaaataataagggtcaaggtcggccagtgagacga 129552 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 || |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 129551 tgagggataagcttcatcgtcgagagggaaacagcccagatcaccagctaaggcccctaa 129492 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 129491 atgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaa 129432 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 129431 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 129372 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| Sbjct: 129371 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgaatcggtaggggagcg 129312 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 |||||||||||||||||| | ||||| ||| | ||| |||||||||||||||||||||| Sbjct: 129311 ttccgccttagagggaagtacccgcgcgagcagtggtggacgaagcggaagcgagaatgt 129252 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||| |||| ||||||||||||||||||| |||||||| |||| |||||| Sbjct: 129251 cggcttgagtaacgcaaacgttggtgagaatccaatgcctcgaaaacctaagggttcctc 129192 Score = 722 bits (364), Expect = 0.0 Identities = 452/480 (94%), Gaps = 1/480 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 102786 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 102844 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 ||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||| Sbjct: 102845 aactctgaatactagatatgacctgaaaataataagggtcaaggtcggccagtgagacga 102904 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 || |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 102905 tgagggataagcttcatcgtcgagagggaaacagcccagatcaccagctaaggcccctaa 102964 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 102965 atgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaa 103024 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 103025 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 103084 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| Sbjct: 103085 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgaatcggtaggggagcg 103144 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 |||||||||||||||||| | ||||| ||| | ||| |||||||||||||||||||||| Sbjct: 103145 ttccgccttagagggaagtacccgcgcgagcagtggtggacgaagcggaagcgagaatgt 103204 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||| |||| ||||||||||||||||||| |||||||| |||| |||||| Sbjct: 103205 cggcttgagtaacgcaaacgttggtgagaatccaatgcctcgaaaacctaagggttcctc 103264
>gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0042L15, from chromosome 3, complete sequence Length = 172475 Score = 716 bits (361), Expect = 0.0 Identities = 361/361 (100%) Strand = Plus / Minus Query: 120 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63889 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 63830 Query: 180 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63829 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 63770 Query: 240 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63769 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 63710 Query: 300 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63709 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 63650 Query: 360 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63649 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 63590 Query: 420 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63589 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 63530 Query: 480 c 480 | Sbjct: 63529 c 63529
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 710 bits (358), Expect = 0.0 Identities = 451/480 (93%), Gaps = 9/480 (1%) Strand = Plus / Minus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 134124 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 134066 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 ||||||||||||||||||||| || ||| ||||||||||||||||||||||||| Sbjct: 134065 aactctgaatactagatatgatcccaaa-------gggtcaaggtcggccagtgagacga 134013 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134012 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 133953 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 133952 atgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaa 133893 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 133892 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 133833 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 133832 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcg 133773 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||||| ||||||||||||| ||||| ||| || || |||||||||||||||||||||| Sbjct: 133772 ttccg-cttagagggaagctcccgcgcgagcaggtgtggacgaagcggaagcgagaatgt 133714 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 133713 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 133654 Score = 710 bits (358), Expect = 0.0 Identities = 451/480 (93%), Gaps = 9/480 (1%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 106158 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 106216 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 ||||||||||||||||||||| || ||| ||||||||||||||||||||||||| Sbjct: 106217 aactctgaatactagatatgatcccaaa-------gggtcaaggtcggccagtgagacga 106269 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106270 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 106329 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 106330 atgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaa 106389 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 106390 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 106449 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 106450 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcg 106509 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||||| ||||||||||||| ||||| ||| || || |||||||||||||||||||||| Sbjct: 106510 ttccg-cttagagggaagctcccgcgcgagcaggtgtggacgaagcggaagcgagaatgt 106568 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 106569 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 106628
>dbj|AK071923.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072N03, full insert sequence Length = 1663 Score = 706 bits (356), Expect = 0.0 Identities = 356/356 (100%) Strand = Plus / Plus Query: 125 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 60 Query: 185 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 120 Query: 245 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 180 Query: 305 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 240 Query: 365 gccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 300 Query: 425 ttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 356
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 692 bits (349), Expect = 0.0 Identities = 450/481 (93%), Gaps = 2/481 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 1355 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 1413 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1414 aactctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgagacga 1473 Query: 121 tggggg-ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 179 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1474 tggggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 1533 Query: 180 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 239 |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct: 1534 aatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctaga 1593 Query: 240 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 299 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 1594 agcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaaga 1653 Query: 300 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 359 |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| Sbjct: 1654 tgaacggggctaagcgatctgccgaagctgtgggatgtaaaaaaacatcggtaggggagc 1713 Query: 360 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 419 |||||| |||| |||||||| | ||| ||| | ||||||||||||||||||||| Sbjct: 1714 gttccgtgttagggggaagcatcggcgcgagccatgccagacgaagcggaagcgagaatg 1773 Query: 420 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 479 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| Sbjct: 1774 tcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcct 1833 Query: 480 c 480 | Sbjct: 1834 c 1834
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 690 bits (348), Expect = 0.0 Identities = 449/480 (93%), Gaps = 2/480 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 877 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 935 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 ||||||||||||||||||||||| |||||||||| |||||||||||||| |||||||||| Sbjct: 936 aactctgaatactagatatgacctaaaaataacaagggtcaaggtcggcaagtgagacga 995 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 996 tgggggataagcttcatcgtcgagagggaaacagccctgatcacccgctaaggcccctaa 1055 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||| |||||||||||||||||||| |||||||| |||||||||||||||||| ||| || Sbjct: 1056 atgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttg-ctataa 1114 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 1115 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 1174 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||| Sbjct: 1175 gaacggggctaagtgatctgccgaagctgtgggatgtaaaaaggcatcggtaggggagcg 1234 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||||| ||||| |||||||| | ||| ||| | ||| |||||||||||||||||||||| Sbjct: 1235 ttccgtcttagggggaagcacctgcgcgagcagtggtagacgaagcggaagcgagaatgt 1294 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 1295 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 1354
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 682 bits (344), Expect = 0.0 Identities = 448/480 (93%), Gaps = 2/480 (0%) Strand = Plus / Plus Query: 2 atctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 61 |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 864 atctaggggtaaag-cactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaa 922 Query: 62 actctgaatactagatatgacccaaaaataacagggg-tcaaggtcggccagtgagacga 120 |||||||||||||||||||| || |||||||||||| | |||||| ||||||||||| Sbjct: 923 actctgaatactagatatgatccccaaataacaggggataaaggtcaaccagtgagacgg 982 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| Sbjct: 983 tgggggataagcttcatcgtcaagagggaaacagcccagatcaccagctaaggcccctaa 1042 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||||||||||| |||||||||| || ||||||||||||||||||||||||||||||| Sbjct: 1043 atgaccgctcagtggtaaaggaggtaggagtgcaaagacagccaggaggtttgcctagaa 1102 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||| ||||| ||||||| |||||| Sbjct: 1103 gcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcgccgaagat 1162 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1163 gaacgggactaagcggtctgccgaagctgtgggatgtcaaaatacatcggtaggggagcg 1222 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 |||||||||||||||||||| | ||| ||| || || |||||||||||||||||||||| Sbjct: 1223 ttccgccttagagggaagcatcagcgcgagcaggtgtggacgaagcggaagcgagaatgt 1282 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 1283 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 1342
>emb|AJ318074.1|CSA318074 Cucumis sativus chloroplast ccsA gene, ndhD gene (partial), 4.5S rRNA gene, 23S rRNA gene (partial) and 5S rRNA gene Length = 6689 Score = 678 bits (342), Expect = 0.0 Identities = 449/480 (93%), Gaps = 6/480 (1%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 321 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 379 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| Sbjct: 380 aactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacga 439 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 440 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 499 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||||| Sbjct: 500 atgatcgctcagtgataaaggaggtaggggtgc-gagacagccaggaggtttgcctagaa 558 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 559 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 618 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 619 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcg 678 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||||||||||||| ||||| ||||| ||||| ||| |||||||||||||||||||||| Sbjct: 679 ttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgt 738 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 | | ||||| | ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 739 c-acgtgagt---gcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 794
>gb|AY694134.1| Pennisetum glaucum clone PGP005 23S ribosomal RNA gene, partial sequence; chloroplast Length = 654 Score = 668 bits (337), Expect = 0.0 Identities = 388/405 (95%) Strand = Plus / Minus Query: 76 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 135 ||||||||||||||||||| |||||||||||||||||| |||| ||||||| ||||||| Sbjct: 640 atatgacccaaaaataacacgggtcaaggtcggccagtaagacattgggggaaaagcttc 581 Query: 136 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 195 ||| || || ||||||||||||||| ||||||||||||| |||||||||||||| ||| Sbjct: 580 atcatctcgaaagaaacagcccggatccccagctaaggcccttaaatgaccgctcaatga 521 Query: 196 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 255 |||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||| Sbjct: 520 taaaggaggtgggggtgcaaagccagccatgaagtttgcctagaagcagccaccctttaa 461 Query: 256 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 460 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 401 Query: 316 atctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagaggg 375 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 400 atctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagaggg 341 Query: 376 aagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacga 435 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 340 aagcaaacgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacga 281 Query: 436 aaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 280 aaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 236
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 662 bits (334), Expect = 0.0 Identities = 451/489 (92%), Gaps = 17/489 (3%) Strand = Plus / Minus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 139500 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 139442 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 ||||||||||||||||| || || |||| |||||||||||||||||||||||| Sbjct: 139441 aactctgaatactagatctggcctcaaaa-------ggtcaaggtcggccagtgagacga 139389 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139388 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 139329 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 139328 atgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaa 139269 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 139268 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 139209 Query: 301 gaacggggctaagcgatctgccgaagctgtgggat-------gtcaaaatgcatcggtag 353 ||||||||||||||||||||||||||||||||||| || ||||||||||||||| Sbjct: 139208 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaagtaaaaatgcatcggtag 139149 Query: 354 gggagcgttccgccttagagggaagcaaccgcgaaagc--gggggtcgacgaagcggaag 411 ||||||||||||||||||||||||||| ||||| ||| | | || ||||||||||||| Sbjct: 139148 gggagcgttccgccttagagggaagcacccgcgcgagcaggcgtgtggacgaagcggaag 139089 Query: 412 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 471 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 139088 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 139029 Query: 472 ggtttcctc 480 || |||||| Sbjct: 139028 gggttcctc 139020 Score = 662 bits (334), Expect = 0.0 Identities = 451/489 (92%), Gaps = 17/489 (3%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 110560 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 110618 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 ||||||||||||||||| || || |||| |||||||||||||||||||||||| Sbjct: 110619 aactctgaatactagatctggcctcaaaa-------ggtcaaggtcggccagtgagacga 110671 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110672 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 110731 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 110732 atgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaa 110791 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 110792 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 110851 Query: 301 gaacggggctaagcgatctgccgaagctgtgggat-------gtcaaaatgcatcggtag 353 ||||||||||||||||||||||||||||||||||| || ||||||||||||||| Sbjct: 110852 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaagtaaaaatgcatcggtag 110911 Query: 354 gggagcgttccgccttagagggaagcaaccgcgaaagc--gggggtcgacgaagcggaag 411 ||||||||||||||||||||||||||| ||||| ||| | | || ||||||||||||| Sbjct: 110912 gggagcgttccgccttagagggaagcacccgcgcgagcaggcgtgtggacgaagcggaag 110971 Query: 412 cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 471 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 110972 cgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaa 111031 Query: 472 ggtttcctc 480 || |||||| Sbjct: 111032 gggttcctc 111040
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 662 bits (334), Expect = 0.0 Identities = 443/473 (93%), Gaps = 6/473 (1%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 880 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 938 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 939 aactctgaatactagatatgacctcaaaataacaggggttaaggtcggccagtgagacga 998 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 999 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 1058 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 1059 atgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaa 1118 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 1119 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 1178 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1179 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcg 1238 Query: 361 ttccgccttagagggaagcaac--cgcgaaagcgggggtcgacgaagcgg-aagcgagaa 417 |||||||||| | |||| || | |||||| |||| | |||||| ||| || | |||| Sbjct: 1239 ttccgccttaaaaggaaacacccgcgcgaacaaggggttggacgaaacggaaaccaagaa 1298 Query: 418 tgtcggcttgagtaacg-aaaaca-ttggtgagaatccaatgccccgaaaacc 468 ||||||||||||||||| |||||| |||||||||||| ||||||||||||||| Sbjct: 1299 tgtcggcttgagtaacgcaaaacatttggtgagaatctaatgccccgaaaacc 1351
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 658 bits (332), Expect = 0.0 Identities = 445/480 (92%), Gaps = 2/480 (0%) Strand = Plus / Minus Query: 2 atctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 61 |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 117285 atctaggggtaaag-cactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaa 117227 Query: 62 actctgaatactagatatgacccaaaaataacaggggtcaa-ggtcggccagtgagacga 120 |||||||||||||||||||| || |||||| ||||| || |||| ||||||||||| Sbjct: 117226 actctgaatactagatatgatccccaaataatagggggtaatggtcaaccagtgagacgg 117167 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| Sbjct: 117166 tgggggataagcttcatcgtcaagagggaaacagcccagatcaccagctaaggcccctaa 117107 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 ||||||||| |||| |||||||||| || ||||||||||||||||||||||||||||||| Sbjct: 117106 atgaccgctaagtggtaaaggaggtaggagtgcaaagacagccaggaggtttgcctagaa 117047 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||| ||||| ||||||| |||||| Sbjct: 117046 gcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcgccgaagat 116987 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 116986 gaacgggactaagcggtctgccgaagctgtgggatgtcaaaatacatcggtaggggagcg 116927 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 |||||||||||||||||||| | ||| ||| || || |||||||||||||||||||||| Sbjct: 116926 ttccgccttagagggaagcatcagcgcgagcaggtgtggacgaagcggaagcgagaatgt 116867 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 116866 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 116807 Score = 658 bits (332), Expect = 0.0 Identities = 445/480 (92%), Gaps = 2/480 (0%) Strand = Plus / Plus Query: 2 atctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 61 |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 90817 atctaggggtaaag-cactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaa 90875 Query: 62 actctgaatactagatatgacccaaaaataacaggggtcaa-ggtcggccagtgagacga 120 |||||||||||||||||||| || |||||| ||||| || |||| ||||||||||| Sbjct: 90876 actctgaatactagatatgatccccaaataatagggggtaatggtcaaccagtgagacgg 90935 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| Sbjct: 90936 tgggggataagcttcatcgtcaagagggaaacagcccagatcaccagctaaggcccctaa 90995 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 ||||||||| |||| |||||||||| || ||||||||||||||||||||||||||||||| Sbjct: 90996 atgaccgctaagtggtaaaggaggtaggagtgcaaagacagccaggaggtttgcctagaa 91055 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||| ||||| ||||||| |||||| Sbjct: 91056 gcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcgccgaagat 91115 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 91116 gaacgggactaagcggtctgccgaagctgtgggatgtcaaaatacatcggtaggggagcg 91175 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 |||||||||||||||||||| | ||| ||| || || |||||||||||||||||||||| Sbjct: 91176 ttccgccttagagggaagcatcagcgcgagcaggtgtggacgaagcggaagcgagaatgt 91235 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 91236 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 91295
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 642 bits (324), Expect = 0.0 Identities = 443/480 (92%), Gaps = 2/480 (0%) Strand = Plus / Plus Query: 2 atctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 61 |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 864 atctaggggtaaag-cactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaa 922 Query: 62 actctgaatactagatatgacccaaaaataacaggggtcaagg-tcggccagtgagacga 120 |||||||||||||||||||| | |||||| |||| |||| || ||||||||||| Sbjct: 923 actctgaatactagatatgatctccgaataacgggggataagggtcaaccagtgagacgg 982 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 983 tgggggataagcttcatcgtcgagagggaaacagcccagatcaccagctaaggcccctaa 1042 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||||||||||| |||||||||| || ||||||||||||||||||||||||||||||| Sbjct: 1043 atgaccgctcagtggtaaaggaggtaggagtgcaaagacagccaggaggtttgcctagaa 1102 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||| ||||| ||||||| |||||| Sbjct: 1103 gcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcgccgaagat 1162 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1163 gaacgggactaagcggtctgccgaagctgtgggatgtcaaaaaacatcggtaggggagcg 1222 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||||||||||| |||||||| | ||| ||| || || |||||||||||||||||||||| Sbjct: 1223 ttccgccttagggggaagcaccagcgcgagcaggtgtggacgaagcggaagcgagaatgt 1282 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 1283 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 1342
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 630 bits (318), Expect = e-177 Identities = 444/482 (92%), Gaps = 3/482 (0%) Strand = Plus / Minus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| ||||||||| |||||||| | | ||||||||||||||||| ||| Sbjct: 51826 catctaggggtaaag-cactgtttcagtgcgggccgtgagagcggtaccaaatcgaagca 51768 Query: 61 aactctgaatactaga-tatgacccaaaaataacaggggtcaaggtcggccagtgagacg 119 |||||||||||||||| ||||||| | |||||| |||||| ||||||||||||||||||| Sbjct: 51767 aactctgaatactagaatatgacctacaaataataggggtaaaggtcggccagtgagacg 51708 Query: 120 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51707 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 51648 Query: 180 aatgaccgctcagtgataaaggaggtg-ggggtgcaaagacagccaggaggtttgcctag 238 | ||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 51647 attgatcgctcagtgataaaggaggttaggggtgcagagacagccaggaggtttgcctag 51588 Query: 239 aagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaag 298 |||||||||||||| |||||||||||||||||| ||||||||||||| ||||||| ||| Sbjct: 51587 aagcagccacccttgaaagagtgcgtaatagcttactgatcgagcgctcttgcgccgaat 51528 Query: 299 atgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggag 358 ||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||| Sbjct: 51527 atgaacggggctaagcgattcgccgaagctgtgggatgtaaaaagacatcggtaggggag 51468 Query: 359 cgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaat 418 ||||||||||||||||||||| | || ||| | ||| |||||||||||||||||||| Sbjct: 51467 cgttccgccttagagggaagcctctgcacgagcagcggtggacgaagcggaagcgagaat 51408 Query: 419 gtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcc 478 |||||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||| Sbjct: 51407 gtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcc 51348 Query: 479 tc 480 || Sbjct: 51347 tc 51346 Score = 630 bits (318), Expect = e-177 Identities = 444/482 (92%), Gaps = 3/482 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| ||||||||| |||||||| | | ||||||||||||||||| ||| Sbjct: 38002 catctaggggtaaag-cactgtttcagtgcgggccgtgagagcggtaccaaatcgaagca 38060 Query: 61 aactctgaatactaga-tatgacccaaaaataacaggggtcaaggtcggccagtgagacg 119 |||||||||||||||| ||||||| | |||||| |||||| ||||||||||||||||||| Sbjct: 38061 aactctgaatactagaatatgacctacaaataataggggtaaaggtcggccagtgagacg 38120 Query: 120 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 38121 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 38180 Query: 180 aatgaccgctcagtgataaaggaggtg-ggggtgcaaagacagccaggaggtttgcctag 238 | ||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 38181 attgatcgctcagtgataaaggaggttaggggtgcagagacagccaggaggtttgcctag 38240 Query: 239 aagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaag 298 |||||||||||||| |||||||||||||||||| ||||||||||||| ||||||| ||| Sbjct: 38241 aagcagccacccttgaaagagtgcgtaatagcttactgatcgagcgctcttgcgccgaat 38300 Query: 299 atgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggag 358 ||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||| Sbjct: 38301 atgaacggggctaagcgattcgccgaagctgtgggatgtaaaaagacatcggtaggggag 38360 Query: 359 cgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaat 418 ||||||||||||||||||||| | || ||| | ||| |||||||||||||||||||| Sbjct: 38361 cgttccgccttagagggaagcctctgcacgagcagcggtggacgaagcggaagcgagaat 38420 Query: 419 gtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcc 478 |||||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||| Sbjct: 38421 gtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcc 38480 Query: 479 tc 480 || Sbjct: 38481 tc 38482
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 630 bits (318), Expect = e-177 Identities = 444/482 (92%), Gaps = 3/482 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| ||||||||| |||||||| | | ||||||||||||||||| ||| Sbjct: 4930 catctaggggtaaag-cactgtttcagtgcgggccgtgagagcggtaccaaatcgaagca 4988 Query: 61 aactctgaatactaga-tatgacccaaaaataacaggggtcaaggtcggccagtgagacg 119 |||||||||||||||| ||||||| | |||||| |||||| ||||||||||||||||||| Sbjct: 4989 aactctgaatactagaatatgacctacaaataataggggtaaaggtcggccagtgagacg 5048 Query: 120 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5049 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 5108 Query: 180 aatgaccgctcagtgataaaggaggtg-ggggtgcaaagacagccaggaggtttgcctag 238 | ||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 5109 attgatcgctcagtgataaaggaggttaggggtgcagagacagccaggaggtttgcctag 5168 Query: 239 aagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaag 298 |||||||||||||| |||||||||||||||||| ||||||||||||| ||||||| ||| Sbjct: 5169 aagcagccacccttgaaagagtgcgtaatagcttactgatcgagcgctcttgcgccgaat 5228 Query: 299 atgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggag 358 ||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||| Sbjct: 5229 atgaacggggctaagcgattcgccgaagctgtgggatgtaaaaagacatcggtaggggag 5288 Query: 359 cgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaat 418 ||||||||||||||||||||| | || ||| | ||| |||||||||||||||||||| Sbjct: 5289 cgttccgccttagagggaagcctctgcacgagcagcggtggacgaagcggaagcgagaat 5348 Query: 419 gtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcc 478 |||||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||| Sbjct: 5349 gtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcc 5408 Query: 479 tc 480 || Sbjct: 5409 tc 5410
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 622 bits (314), Expect = e-175 Identities = 441/480 (91%), Gaps = 5/480 (1%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||| ||||| ||| ||||||||||||||||||||| Sbjct: 87126 catctaggggtaaag-cactgtttcggtacgggccgcgagagcggtaccaaatcgaggca 87184 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 ||||||||||||||||| || ||| ||||| |||||| | |||| |||||||||||| Sbjct: 87185 aactctgaatactagat-tgcccc---aataaaaggggtaagggtcaaccagtgagacga 87240 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 87241 tgggggataagcttcatcgtcgagaggggaacagcccagatcaccagctaaggcccctaa 87300 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||||||||||||| ||||| || | ||||||||||||||||||||||||||||||| Sbjct: 87301 atgaccgctcagtgatgaaggaagtacgagtgcaaagacagccaggaggtttgcctagaa 87360 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 ||||||| |||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 87361 gcagccaaccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 87420 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 87421 gaacgggactaagcgatctgccgaagctgtgggatgtcaaaatacatcggtaggggagcg 87480 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 |||||||| |||| |||||| | ||| ||| || || |||||||||||||||||||||| Sbjct: 87481 ttccgcctcagagagaagcaccggcgcgagcaggtgtggacgaagcggaagcgagaatgt 87540 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 87541 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 87600
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 618 bits (312), Expect = e-174 Identities = 445/487 (91%), Gaps = 8/487 (1%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| ||||||||| |||||||| | | ||||||||||||||||| ||| Sbjct: 859 catctaggggtaaag-cactgtttcagtgcgggccgtgagagcggtaccaaatcgaagca 917 Query: 61 aactctgaatactaga-tatgacccaaaaataacaggggtcaaggtcggccagtgagacg 119 |||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||| Sbjct: 918 aactctgaatactagaatatgacctaaaaataacaggggtaaaggtcggccagtgagacg 977 Query: 120 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 179 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 978 atgggggataagcttcatcgtcgagagggaaacagcccagatcaccagctaaggccccta 1037 Query: 180 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 239 | ||| |||||||||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct: 1038 attgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctaga 1097 Query: 240 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 299 ||||||||||||| ||| |||||||||||||| ||||||||||||| ||||||| ||||| Sbjct: 1098 agcagccacccttgaaatagtgcgtaatagcttactgatcgagcgctcttgcgccgaaga 1157 Query: 300 tgaacggggctaagcgatctgccgaagctgtgggatg------tcaaaatgcatcggtag 353 | ||||||||||||||||| ||||||||||||||||| | ||||| ||||||||| Sbjct: 1158 ttaacggggctaagcgatccgccgaagctgtgggatgtaaaaataaaaatacatcggtag 1217 Query: 354 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 413 |||||||||||||||||||||||||| | || ||| | ||| |||||| |||||||| Sbjct: 1218 gggagcgttccgccttagagggaagcctctgcacgagcagcggtggacgaaacggaagcg 1277 Query: 414 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 473 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 1278 agaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagg 1337 Query: 474 tttcctc 480 |||||| Sbjct: 1338 gttcctc 1344
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 603 bits (304), Expect = e-169 Identities = 443/485 (91%), Gaps = 7/485 (1%) Strand = Plus / Minus Query: 2 atctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 61 |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 145695 atctaggggtaaag-cactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaa 145637 Query: 62 actctgaatactagatatgacc--caaa---aataacagg-ggtcaaggtcggccagtga 115 |||||||||||||| ||||| | |||| || |||||| ||| |||||| |||||||| Sbjct: 145636 actctgaatactaggtatgatctccaaatgaaagaacaggaggtaaaggtcagccagtga 145577 Query: 116 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 175 |||| |||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 145576 gacggtgggggataagcttcatcgtcgagaggggaacagcccagatcaccagctaaggcc 145517 Query: 176 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 235 ||||||||||||||||||| | |||||||| || ||||| |||||||||||| ||||||| Sbjct: 145516 cctaaatgaccgctcagtggtgaaggaggtaggagtgcagagacagccaggaagtttgcc 145457 Query: 236 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 295 ||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||| | Sbjct: 145456 tagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcgccg 145397 Query: 296 aagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggg 355 || ||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||| Sbjct: 145396 aaaatgaacgggactaagcggtctgccgaagctgtgggatgtcaaaaaacatcggtaggg 145337 Query: 356 gagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgag 415 ||||||||||||||||||||||||| | ||| ||| || || ||| ||||||||||||| Sbjct: 145336 gagcgttccgccttagagggaagcaccagcgcgagcaggtgtggacaaagcggaagcgag 145277 Query: 416 aatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtt 475 ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| | Sbjct: 145276 aatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggt 145217 Query: 476 tcctc 480 ||||| Sbjct: 145216 tcctc 145212 Score = 603 bits (304), Expect = e-169 Identities = 443/485 (91%), Gaps = 7/485 (1%) Strand = Plus / Plus Query: 2 atctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 61 |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 112767 atctaggggtaaag-cactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaa 112825 Query: 62 actctgaatactagatatgacc--caaa---aataacagg-ggtcaaggtcggccagtga 115 |||||||||||||| ||||| | |||| || |||||| ||| |||||| |||||||| Sbjct: 112826 actctgaatactaggtatgatctccaaatgaaagaacaggaggtaaaggtcagccagtga 112885 Query: 116 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 175 |||| |||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 112886 gacggtgggggataagcttcatcgtcgagaggggaacagcccagatcaccagctaaggcc 112945 Query: 176 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 235 ||||||||||||||||||| | |||||||| || ||||| |||||||||||| ||||||| Sbjct: 112946 cctaaatgaccgctcagtggtgaaggaggtaggagtgcagagacagccaggaagtttgcc 113005 Query: 236 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 295 ||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||| | Sbjct: 113006 tagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcgccg 113065 Query: 296 aagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggg 355 || ||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||| Sbjct: 113066 aaaatgaacgggactaagcggtctgccgaagctgtgggatgtcaaaaaacatcggtaggg 113125 Query: 356 gagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgag 415 ||||||||||||||||||||||||| | ||| ||| || || ||| ||||||||||||| Sbjct: 113126 gagcgttccgccttagagggaagcaccagcgcgagcaggtgtggacaaagcggaagcgag 113185 Query: 416 aatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtt 475 ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| | Sbjct: 113186 aatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggt 113245 Query: 476 tcctc 480 ||||| Sbjct: 113246 tcctc 113250
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 597 bits (301), Expect = e-167 Identities = 350/365 (95%), Gaps = 1/365 (0%) Strand = Plus / Minus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 130931 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 130873 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 130872 aactctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgagacga 130813 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130812 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 130753 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 130752 atgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaa 130693 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 130692 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 130633 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 130632 gaacggggctaagcggtctgccgaagctgtgggatgtaaaaaaacatcggtaggggagcg 130573 Query: 361 ttccg 365 ||||| Sbjct: 130572 ttccg 130568 Score = 597 bits (301), Expect = e-167 Identities = 350/365 (95%), Gaps = 1/365 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 102514 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 102572 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 102573 aactctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgagacga 102632 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102633 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 102692 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 102693 atgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaa 102752 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 102753 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 102812 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 102813 gaacggggctaagcggtctgccgaagctgtgggatgtaaaaaaacatcggtaggggagcg 102872 Query: 361 ttccg 365 ||||| Sbjct: 102873 ttccg 102877 Score = 139 bits (70), Expect = 9e-30 Identities = 79/82 (96%) Strand = Plus / Minus Query: 399 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 458 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 130534 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 130475 Query: 459 cccgaaaacccaaggtttcctc 480 |||||||||| |||| |||||| Sbjct: 130474 cccgaaaacctaagggttcctc 130453 Score = 139 bits (70), Expect = 9e-30 Identities = 79/82 (96%) Strand = Plus / Plus Query: 399 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 458 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 102911 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 102970 Query: 459 cccgaaaacccaaggtttcctc 480 |||||||||| |||| |||||| Sbjct: 102971 cccgaaaacctaagggttcctc 102992
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 589 bits (297), Expect = e-165 Identities = 358/377 (94%), Gaps = 1/377 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 868 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 926 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| | Sbjct: 927 aactctgaatactagatatgacctcaaaataacaggggttaaggtcggccagtgagacaa 986 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 987 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 1046 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 ||||||||||| ||||||||||||| |||||||| ||||||||| |||||||||||| || Sbjct: 1047 atgaccgctcaatgataaaggaggtaggggtgcacagacagccacgaggtttgcctataa 1106 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 1107 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcccaagat 1166 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1167 gaacggggctaaacgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcg 1226 Query: 361 ttccgccttagagggaa 377 |||| |||||||||||| Sbjct: 1227 ttcccccttagagggaa 1243 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 423 gcttgagtaacgaaaacattggtgagaatccaatgcccc 461 |||||||||||| ||||| ||||||||||| |||||||| Sbjct: 1288 gcttgagtaacgcaaacaatggtgagaatctaatgcccc 1326
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 589 bits (297), Expect = e-165 Identities = 421/461 (91%), Gaps = 1/461 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 879 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 937 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| | Sbjct: 938 aactctgaatactagatatgacctcaaaataacaggggttaaggtcggccagtgagacca 997 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 998 tgggggataagcttcatcgtccagagggaaacagcccggatcaccagctaaggcccctaa 1057 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 ||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||| Sbjct: 1058 atgaccgctcagtgataaaggaggtaggggtgcagagacagccaagaggtttgcctagaa 1117 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||| ||||| ||||||| || || Sbjct: 1118 gcagccacccttgaaagagtgcgtaatagctcactgatccagcgctcttgcgcccaaaat 1177 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| Sbjct: 1178 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatccgtaggggagcg 1237 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 |||| ||||| |||||| || || | | | |||| ||| || ||||| | ||||||| Sbjct: 1238 ttcccccttaaagggaaacaccccccccaacatgggtggaccaaacggaaaccagaatgt 1297 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgcccc 461 | || | ||||||| ||||||||||||||||| |||||||| Sbjct: 1298 ccgccttagtaacgcaaacattggtgagaatctaatgcccc 1338
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 589 bits (297), Expect = e-165 Identities = 438/481 (91%), Gaps = 3/481 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 |||||| |||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 880 catctaagggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 938 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 |||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 939 aactctgaatactaaatatgacctcaaaataacaggggttaaggtcggccagtgagacga 998 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 999 tgggggataagcttcatcgtccagagggaaacagcccggatcaccagctaaggcccctaa 1058 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 ||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||| || Sbjct: 1059 atgaccgctcagtgataaaggaggtaggggtgcacagacagccaagaggtttgcctaaaa 1118 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| ||||||||||||||| |||||||||||||||| ||||||| |||||| Sbjct: 1119 gcagccacccttgaaagagtgcgtaataactcactgatcgagcgctcttgcgccgaagat 1178 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| Sbjct: 1179 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatccgtaggggagcg 1238 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 |||| ||||| ||||||||| |||| ||| |||| |||||| | | | | | ||||| Sbjct: 1239 ttcccccttatagggaagcacccgccccagcaagggtggacgaaaccg-atctaaaatgt 1297 Query: 421 cggcttgagtaacgaaaaca-ttggtgagaatccaatgccccgaaaacccaaggtttcct 479 | ||||||||| ||||| ||||||||||||||||||||| |||||| |||| ||||| Sbjct: 1298 ccccttgagtaaaccaaacatttggtgagaatccaatgcccccaaaacctaagggttcct 1357 Query: 480 c 480 | Sbjct: 1358 c 1358
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 589 bits (297), Expect = e-165 Identities = 437/480 (91%), Gaps = 4/480 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||| ||||| || ||||||||||||||||||||| Sbjct: 89212 catctaggggtaaag-cactgtttcggtacgggccacgagagcggtaccaaatcgaggca 89270 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 ||||||||||||||||| |||| || | || ||||| | |||| |||||||||||| Sbjct: 89271 aactctgaatactagatt--accccaataaaag-ggggtaagggtcaaccagtgagacga 89327 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 89328 tgggggataagcttcatcgtcgagaggggaacagcccagatcaccagctaaggcccctaa 89387 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||||||||||||| ||||| || | ||||||||||||||||||||||||||||||| Sbjct: 89388 atgaccgctcagtgatgaaggaagtacgagtgcaaagacagccaggaggtttgcctagaa 89447 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 ||||||| |||| |||||||||||||||||||||||||||||||| | ||||| |||||| Sbjct: 89448 gcagccaaccttgaaagagtgcgtaatagctcactgatcgagcgctcgtgcgccgaagat 89507 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 89508 gaacgggactaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcg 89567 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 |||||||| ||||||||||| | ||| ||| || || |||||||||||||||||||||| Sbjct: 89568 ttccgcctcagagggaagcaccggcgcgagcaggtgtggacgaagcggaagcgagaatgt 89627 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 89628 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 89687
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 587 bits (296), Expect = e-164 Identities = 360/380 (94%), Gaps = 1/380 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 866 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 924 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 925 aactctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgagacga 984 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 985 tgggggataagcttcatcgtccagagggaaacagcccggatcaccagctaaggcccctaa 1044 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| || Sbjct: 1045 atgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctaaaa 1104 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 1105 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 1164 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 |||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 1165 gaacggggctaaacgatctgccgaagctgtgggatgtaaaaaaacatcggtaggggagcg 1224 Query: 361 ttccgccttagagggaagca 380 ||||| |||| |||||||| Sbjct: 1225 ttccgtgttagggggaagca 1244
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 575 bits (290), Expect = e-161 Identities = 364/386 (94%), Gaps = 2/386 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 841 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 899 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 900 aactctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgagacga 959 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 960 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 1019 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 1020 atgaccgcccagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaa 1079 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 1080 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 1139 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta-ggggagc 359 ||||||||||||||||||||||||||||||||||||| |||| |||| ||| ||| ||| Sbjct: 1140 gaacggggctaagcgatctgccgaagctgtgggatgtaaaaaaacatccgtatgggaagc 1199 Query: 360 gttccgccttagagggaagcaaccgc 385 |||||| |||| |||||||| |||| Sbjct: 1200 gttccgtgttagggggaagcatccgc 1225
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 575 bits (290), Expect = e-161 Identities = 363/386 (94%), Gaps = 1/386 (0%) Strand = Plus / Plus Query: 96 gggtcaaggtcggccagtgagacgatgggggataagcttcatc-gtcgagagggaaacag 154 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5445 gggtcaaggtcggccagtgagacgatgggggataagcttcatctgtcgagagggaaacag 5504 Query: 155 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 214 ||| |||||||||||||||||||||||||| |||||||||||||||||||| || ||||| Sbjct: 5505 cccagatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgca 5564 Query: 215 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 274 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 5565 gagacagccaggaggtttgcctagaagcagccacccttcaaagagtgcgtaatagctcac 5624 Query: 275 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 334 ||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 5625 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatttgccgaagctgtggga 5684 Query: 335 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 394 ||| |||||| ||||||||||||||||||||||||||| |||| | ||||| ||| || Sbjct: 5685 tgtaaaaatgaatcggtaggggagcgttccgccttagaaagaagtacccgcgcgagcagg 5744 Query: 395 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 454 | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5745 gttggacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 5804 Query: 455 atgccccgaaaacccaaggtttcctc 480 |||||||||||||| |||| |||||| Sbjct: 5805 atgccccgaaaacctaaggattcctc 5830 Score = 127 bits (64), Expect = 4e-26 Identities = 80/84 (95%), Gaps = 1/84 (1%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| ||||||||||| |||||| ||| ||||||||||||||||||||| Sbjct: 5358 catctaggggtaaag-cactgtttcggcgcgggccgcgagagcggtaccaaatcgaggca 5416 Query: 61 aactctgaatactagatatgaccc 84 |||||||||||||||||||||||| Sbjct: 5417 aactctgaatactagatatgaccc 5440
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 575 bits (290), Expect = e-161 Identities = 363/386 (94%), Gaps = 1/386 (0%) Strand = Plus / Plus Query: 96 gggtcaaggtcggccagtgagacgatgggggataagcttcatc-gtcgagagggaaacag 154 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5445 gggtcaaggtcggccagtgagacgatgggggataagcttcatctgtcgagagggaaacag 5504 Query: 155 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 214 ||| |||||||||||||||||||||||||| |||||||||||||||||||| || ||||| Sbjct: 5505 cccagatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgca 5564 Query: 215 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 274 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 5565 gagacagccaggaggtttgcctagaagcagccacccttcaaagagtgcgtaatagctcac 5624 Query: 275 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 334 ||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 5625 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatttgccgaagctgtggga 5684 Query: 335 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 394 ||| |||||| ||||||||||||||||||||||||||| |||| | ||||| ||| || Sbjct: 5685 tgtaaaaatgaatcggtaggggagcgttccgccttagaaagaagtacccgcgcgagcagg 5744 Query: 395 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 454 | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5745 gttggacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 5804 Query: 455 atgccccgaaaacccaaggtttcctc 480 |||||||||||||| |||| |||||| Sbjct: 5805 atgccccgaaaacctaaggattcctc 5830 Score = 127 bits (64), Expect = 4e-26 Identities = 80/84 (95%), Gaps = 1/84 (1%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| ||||||||||| |||||| ||| ||||||||||||||||||||| Sbjct: 5358 catctaggggtaaag-cactgtttcggcgcgggccgcgagagcggtaccaaatcgaggca 5416 Query: 61 aactctgaatactagatatgaccc 84 |||||||||||||||||||||||| Sbjct: 5417 aactctgaatactagatatgaccc 5440
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 571 bits (288), Expect = e-160 Identities = 434/480 (90%), Gaps = 2/480 (0%) Strand = Plus / Plus Query: 2 atctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 61 |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 868 atctaggggtaaag-cactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaa 926 Query: 62 actctgaatactagatatgacccaaaaataacaggg-gtcaaggtcggccagtgagacga 120 |||||||||||| |||| ||| | ||||| || | || | |||| |||||||||| Sbjct: 927 actctgaatactggataggactccctaataatagagagtaagggtcaaccagtgagacag 986 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 ||||||||||||||||| |||||||||| |||||||| ||||||| |||||||||||||| Sbjct: 987 tgggggataagcttcattgtcgagaggggaacagcccagatcaccggctaaggcccctaa 1046 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 ||||||||| |||| |||||||||| || ||||||||||||||||||||||||||||||| Sbjct: 1047 atgaccgctaagtggtaaaggaggtaggagtgcaaagacagccaggaggtttgcctagaa 1106 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 ||||||| |||| |||||||||||||||||||||||||| ||||| ||||||| |||||| Sbjct: 1107 gcagccatccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcgccgaagat 1166 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||| ||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1167 gaatgggactaagcggtctgccgaagctgtgggatgtcaaaatacatcggtaggggagcg 1226 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||||||||||| | |||||| | ||| ||| || || |||||||||||||||||||||| Sbjct: 1227 ttccgccttagggagaagcaccagcgtgagcaggtgtggacgaagcggaagcgagaatgt 1286 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 1287 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 1346
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 565 bits (285), Expect = e-158 Identities = 354/377 (93%) Strand = Plus / Plus Query: 104 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 163 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 5182 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatca 5241 Query: 164 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 223 ||||||||||||||||||||| |||||||||||||||||||| || ||||| |||||||| Sbjct: 5242 ccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgcagagacagcc 5301 Query: 224 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 283 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 5302 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 5361 Query: 284 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 343 || ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 5362 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatctaaaaat 5421 Query: 344 gcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacga 403 | ||||||||||||||||||||||||||| |||| | ||||| ||| ||| | ||||| Sbjct: 5422 gaatcggtaggggagcgttccgccttagaacgaagtacccgcgcgagcagggttggacga 5481 Query: 404 agcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccga 463 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 5482 agcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccga 5541 Query: 464 aaacccaaggtttcctc 480 ||||| |||| |||||| Sbjct: 5542 aaacctaagggttcctc 5558 Score = 117 bits (59), Expect = 3e-23 Identities = 75/79 (94%), Gaps = 1/79 (1%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| ||||||||||| |||||| ||| ||||||||||||||||||||| Sbjct: 5090 catctaggggtaaag-cactgtttcggcgcgggccgcgagagcggtaccaaatcgaggca 5148 Query: 61 aactctgaatactagatat 79 ||||||||||||||||||| Sbjct: 5149 aactctgaatactagatat 5167
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 565 bits (285), Expect = e-158 Identities = 354/377 (93%) Strand = Plus / Minus Query: 104 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 163 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 22743 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatca 22684 Query: 164 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 223 ||||||||||||||||||||| |||||||||||||||||||| || ||||| |||||||| Sbjct: 22683 ccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgcagagacagcc 22624 Query: 224 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 283 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 22623 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 22564 Query: 284 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 343 || ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 22563 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatctaaaaat 22504 Query: 344 gcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacga 403 | ||||||||||||||||||||||||||| |||| | ||||| ||| ||| | ||||| Sbjct: 22503 gaatcggtaggggagcgttccgccttagaacgaagtacccgcgcgagcagggttggacga 22444 Query: 404 agcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccga 463 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 22443 agcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccga 22384 Query: 464 aaacccaaggtttcctc 480 ||||| |||| |||||| Sbjct: 22383 aaacctaagggttcctc 22367 Score = 117 bits (59), Expect = 3e-23 Identities = 75/79 (94%), Gaps = 1/79 (1%) Strand = Plus / Minus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| ||||||||||| |||||| ||| ||||||||||||||||||||| Sbjct: 22835 catctaggggtaaag-cactgtttcggcgcgggccgcgagagcggtaccaaatcgaggca 22777 Query: 61 aactctgaatactagatat 79 ||||||||||||||||||| Sbjct: 22776 aactctgaatactagatat 22758
>dbj|AK105692.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-C06, full insert sequence Length = 2509 Score = 565 bits (285), Expect = e-158 Identities = 285/285 (100%) Strand = Plus / Plus Query: 196 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 255 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 60 Query: 256 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 120 Query: 316 atctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagaggg 375 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 atctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagaggg 180 Query: 376 aagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacga 435 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 aagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacga 240 Query: 436 aaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 aaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 285
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 551 bits (278), Expect = e-154 Identities = 285/286 (99%), Gaps = 1/286 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 665 catctaggggtaaag-cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 723 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 724 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 783 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 784 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 843 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 844 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 903 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 286 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 904 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 949
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 547 bits (276), Expect = e-152 Identities = 307/316 (97%), Gaps = 1/316 (0%) Strand = Plus / Minus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 122346 catctaggggtaaag-cactgtttcggtgcgggctgcgcgagcggtaccaaattgaggca 122288 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 |||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||||| Sbjct: 122287 aactctgaatactagatatgacccaaaaataataggattcaaagtcggccagtgagacga 122228 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 122227 tgggggataagcttcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaa 122168 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122167 atgaccgctcaatgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 122108 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 122107 gcagccaccctttaaagagtgcgtaatagctcactaatcgagcgcccttgcgctgaagat 122048 Query: 301 gaacggggctaagcga 316 |||||||||||||||| Sbjct: 122047 gaacggggctaagcga 122032
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 547 bits (276), Expect = e-152 Identities = 307/316 (97%), Gaps = 1/316 (0%) Strand = Plus / Minus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 12824887 catctaggggtaaag-cactgtttcggtgcgggctgcgcgagcggtaccaaattgaggca 12824829 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 |||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||||| Sbjct: 12824828 aactctgaatactagatatgacccaaaaataataggattcaaagtcggccagtgagacga 12824769 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 12824768 tgggggataagcttcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaa 12824709 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824708 atgaccgctcaatgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 12824649 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 12824648 gcagccaccctttaaagagtgcgtaatagctcactaatcgagcgcccttgcgctgaagat 12824589 Query: 301 gaacggggctaagcga 316 |||||||||||||||| Sbjct: 12824588 gaacggggctaagcga 12824573
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 539 bits (272), Expect = e-150 Identities = 356/383 (92%), Gaps = 7/383 (1%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| |||| |||||||||||||||| Sbjct: 880 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcagtaccaaatcgaggca 938 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 ||||||||||||||||||||||| | |||||||| ||||||||||| |||||||| Sbjct: 939 aactctgaatactagatatgacc------tcacaggggttaaggtcggccaatgagacga 992 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 993 tgggggataagcttcatcttccagagggaaacagcccggatcaccagctaaggcccctaa 1052 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| Sbjct: 1053 atgaccgctcagtgataaaggaggtaggggtgcaaagacagccacgaggtttgcctagaa 1112 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| || || Sbjct: 1113 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcccaaaat 1172 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1173 gaacggggctaaacgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcg 1232 Query: 361 ttccgccttagagggaagcaacc 383 ||||||| || |||||| ||||| Sbjct: 1233 ttccgccctaaagggaaacaacc 1255 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 436 aaacattggtgagaatccaatgccccgaaaa 466 ||||| ||||||||||| ||||||||||||| Sbjct: 1311 aaacaatggtgagaatctaatgccccgaaaa 1341
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 535 bits (270), Expect = e-149 Identities = 351/378 (92%) Strand = Plus / Plus Query: 103 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 162 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 4858 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 4917 Query: 163 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 222 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 4918 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 4977 Query: 223 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 282 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 4978 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 5037 Query: 283 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 342 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 5038 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 5097 Query: 343 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 402 | |||||||||||||||||||||||||||||||||||| | ||| ||| || || |||| Sbjct: 5098 tacatcggtaggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggacg 5157 Query: 403 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 462 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 5158 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 5217 Query: 463 aaaacccaaggtttcctc 480 |||||| |||| |||||| Sbjct: 5218 aaaacctaagggttcctc 5235 Score = 125 bits (63), Expect = 1e-25 Identities = 76/79 (96%), Gaps = 1/79 (1%) Strand = Plus / Plus Query: 2 atctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 61 |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 4753 atctaggggtaaag-cactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaa 4811 Query: 62 actctgaatactagatatg 80 |||||||||||||| |||| Sbjct: 4812 actctgaatactaggtatg 4830
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 535 bits (270), Expect = e-149 Identities = 351/378 (92%) Strand = Plus / Plus Query: 103 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 162 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 968 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 1027 Query: 163 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 222 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1028 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 1087 Query: 223 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 282 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 1088 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 1147 Query: 283 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 342 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 1148 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 1207 Query: 343 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 402 | |||||||||||||||||||||||||||||||||||| | ||| ||| || || |||| Sbjct: 1208 tacatcggtaggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggacg 1267 Query: 403 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 462 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1268 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 1327 Query: 463 aaaacccaaggtttcctc 480 |||||| |||| |||||| Sbjct: 1328 aaaacctaagggttcctc 1345 Score = 125 bits (63), Expect = 1e-25 Identities = 76/79 (96%), Gaps = 1/79 (1%) Strand = Plus / Plus Query: 2 atctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 61 |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 863 atctaggggtaaag-cactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaa 921 Query: 62 actctgaatactagatatg 80 |||||||||||||| |||| Sbjct: 922 actctgaatactaggtatg 940
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 535 bits (270), Expect = e-149 Identities = 351/378 (92%) Strand = Plus / Minus Query: 103 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 162 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 150277 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 150218 Query: 163 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 222 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 150217 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 150158 Query: 223 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 282 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 150157 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 150098 Query: 283 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 342 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 150097 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 150038 Query: 343 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 402 | |||||||||||||||||||||||||||||||||||| | ||| ||| || || |||| Sbjct: 150037 tacatcggtaggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggacg 149978 Query: 403 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 462 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 149977 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 149918 Query: 463 aaaacccaaggtttcctc 480 |||||| |||| |||||| Sbjct: 149917 aaaacctaagggttcctc 149900 Score = 535 bits (270), Expect = e-149 Identities = 351/378 (92%) Strand = Plus / Plus Query: 103 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 162 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 118389 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 118448 Query: 163 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 222 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 118449 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 118508 Query: 223 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 282 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 118509 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 118568 Query: 283 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 342 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 118569 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 118628 Query: 343 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 402 | |||||||||||||||||||||||||||||||||||| | ||| ||| || || |||| Sbjct: 118629 tacatcggtaggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggacg 118688 Query: 403 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 462 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 118689 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 118748 Query: 463 aaaacccaaggtttcctc 480 |||||| |||| |||||| Sbjct: 118749 aaaacctaagggttcctc 118766 Score = 125 bits (63), Expect = 1e-25 Identities = 76/79 (96%), Gaps = 1/79 (1%) Strand = Plus / Minus Query: 2 atctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 61 |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 150382 atctaggggtaaag-cactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaa 150324 Query: 62 actctgaatactagatatg 80 |||||||||||||| |||| Sbjct: 150323 actctgaatactaggtatg 150305 Score = 125 bits (63), Expect = 1e-25 Identities = 76/79 (96%), Gaps = 1/79 (1%) Strand = Plus / Plus Query: 2 atctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 61 |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 118284 atctaggggtaaag-cactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaa 118342 Query: 62 actctgaatactagatatg 80 |||||||||||||| |||| Sbjct: 118343 actctgaatactaggtatg 118361
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 535 bits (270), Expect = e-149 Identities = 351/378 (92%) Strand = Plus / Plus Query: 103 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 162 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 968 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 1027 Query: 163 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 222 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1028 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 1087 Query: 223 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 282 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 1088 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 1147 Query: 283 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 342 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 1148 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 1207 Query: 343 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 402 | |||||||||||||||||||||||||||||||||||| | ||| ||| || || |||| Sbjct: 1208 tacatcggtaggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggacg 1267 Query: 403 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 462 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1268 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 1327 Query: 463 aaaacccaaggtttcctc 480 |||||| |||| |||||| Sbjct: 1328 aaaacctaagggttcctc 1345 Score = 125 bits (63), Expect = 1e-25 Identities = 76/79 (96%), Gaps = 1/79 (1%) Strand = Plus / Plus Query: 2 atctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 61 |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 863 atctaggggtaaag-cactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaa 921 Query: 62 actctgaatactagatatg 80 |||||||||||||| |||| Sbjct: 922 actctgaatactaggtatg 940
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 533 bits (269), Expect = e-148 Identities = 426/477 (89%), Gaps = 1/477 (0%) Strand = Plus / Minus Query: 4 ctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 63 |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 127575 ctaggggtaaag-cactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaac 127517 Query: 64 tctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgg 123 |||||||||||| |||||||| || ||| ||| | |||| ||||||||||||||| Sbjct: 127516 tctgaatactaggtatgacccccgaagaacggggaaaagggtcaaccagtgagacgatgg 127457 Query: 124 gggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatg 183 |||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 127456 gggataagcttcattgtcgagaggggaacagcccagatcaccagctaaggcccctaaatg 127397 Query: 184 accgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagca 243 || |||||||| |||||||||| || |||||||||||||||||||||||||||||||||| Sbjct: 127396 actgctcagtggtaaaggaggtaggagtgcaaagacagccaggaggtttgcctagaagca 127337 Query: 244 gccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaa 303 ||||||||| |||||||||||||||||||||||||| ||||| ||| ||| ||| ||||| Sbjct: 127336 gccacccttaaaagagtgcgtaatagctcactgatcaagcgctcttacgccgaaaatgaa 127277 Query: 304 cggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttc 363 |||| ||||| | ||||||||||||||| ||||||||| ||||||||||||||||||| Sbjct: 127276 cgggactaagtggtctgccgaagctgtgagatgtcaaaggacatcggtaggggagcgttc 127217 Query: 364 cgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcgg 423 || | ||| |||||| ||| ||| || || ||||||||||||||||||||||||| Sbjct: 127216 cgtatcagaaagaagcactagcgtgagcaggtgtggacgaagcggaagcgagaatgtcgg 127157 Query: 424 cttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 ||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 127156 cttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 127100 Score = 533 bits (269), Expect = e-148 Identities = 426/477 (89%), Gaps = 1/477 (0%) Strand = Plus / Plus Query: 4 ctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 63 |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 95872 ctaggggtaaag-cactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaac 95930 Query: 64 tctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgg 123 |||||||||||| |||||||| || ||| ||| | |||| ||||||||||||||| Sbjct: 95931 tctgaatactaggtatgacccccgaagaacggggaaaagggtcaaccagtgagacgatgg 95990 Query: 124 gggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatg 183 |||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 95991 gggataagcttcattgtcgagaggggaacagcccagatcaccagctaaggcccctaaatg 96050 Query: 184 accgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagca 243 || |||||||| |||||||||| || |||||||||||||||||||||||||||||||||| Sbjct: 96051 actgctcagtggtaaaggaggtaggagtgcaaagacagccaggaggtttgcctagaagca 96110 Query: 244 gccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaa 303 ||||||||| |||||||||||||||||||||||||| ||||| ||| ||| ||| ||||| Sbjct: 96111 gccacccttaaaagagtgcgtaatagctcactgatcaagcgctcttacgccgaaaatgaa 96170 Query: 304 cggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttc 363 |||| ||||| | ||||||||||||||| ||||||||| ||||||||||||||||||| Sbjct: 96171 cgggactaagtggtctgccgaagctgtgagatgtcaaaggacatcggtaggggagcgttc 96230 Query: 364 cgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcgg 423 || | ||| |||||| ||| ||| || || ||||||||||||||||||||||||| Sbjct: 96231 cgtatcagaaagaagcactagcgtgagcaggtgtggacgaagcggaagcgagaatgtcgg 96290 Query: 424 cttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 ||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 96291 cttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 96347
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 533 bits (269), Expect = e-148 Identities = 338/357 (94%), Gaps = 3/357 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| ||| |||||||||||||| ||| ||||||||||||||||||||| Sbjct: 177703 catctaggggtaaag-cacggtttcggtgcgggccgcgagagcggtaccaaatcgaggca 177761 Query: 61 aactctgaatactagatatgacccaaaaataacaggggt-caaggtcggccagtgagacg 119 ||||||||||||||||||||||| ||||||| ||||| |||||||||| ||||||||| Sbjct: 177762 aactctgaatactagatatgacctcaaaataagaggggggcaaggtcggctagtgagacg 177821 Query: 120 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 179 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 177822 atgggggataagcttcatcgtcgagagggaaagagcccggatcaccagctaaggccccta 177881 Query: 180 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 239 |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct: 177882 aatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctaga 177941 Query: 240 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 299 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 177942 agcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaaga 178001 Query: 300 tgaacggggctaagcgat-ctgccgaagctgtgggatgtcaaaatgcatcggtaggg 355 |||||||||||||||||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 178002 tgaacggggctaagcgatcctgccgaagctgtgggatgtcaaaatacatcggcaggg 178058 Score = 48.1 bits (24), Expect = 0.027 Identities = 51/60 (85%) Strand = Plus / Plus Query: 217 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 276 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 419034 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 419093 Score = 48.1 bits (24), Expect = 0.027 Identities = 51/60 (85%) Strand = Plus / Plus Query: 217 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 276 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 68284 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 68343 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 171 aggcccctaaatgaccgctcag 192 |||||||||||||||||||||| Sbjct: 327554 aggcccctaaatgaccgctcag 327575 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 139 gtcgagagggaaacagcccggatc 162 ||||||||||||||||||| |||| Sbjct: 418956 gtcgagagggaaacagcccagatc 418979 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 139 gtcgagagggaaacagcccggatc 162 ||||||||||||||||||| |||| Sbjct: 68206 gtcgagagggaaacagcccagatc 68229
>gb|AF322910.1|AF322910 Vigna radiata 23S ribosomal RNA, partial sequence; chloroplast gene for chloroplast product Length = 1041 Score = 527 bits (266), Expect = e-146 Identities = 333/354 (94%), Gaps = 1/354 (0%) Strand = Plus / Plus Query: 127 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 186 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 257 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 316 Query: 187 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 246 ||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||| Sbjct: 317 gctcagtgataaaggaggtaggggtgcagagacaaccaggaggtttgcctagaagcagcc 376 Query: 247 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 306 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 377 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 436 Query: 307 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 366 |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| Sbjct: 437 ggctaagcgatctgccgaagctgtgggatgtcaaaatgaatcggtagggga-cgttccgc 495 Query: 367 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 426 ||||| |||||| | ||||| ||| | | | |||||||||||||||||||||||||||| Sbjct: 496 cttagggggaaggacccgcgcgagcagtgctggacgaagcggaagcgagaatgtcggctt 555 Query: 427 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||| |||| ||||||||||||||||||| ||||||||||||| |||||| Sbjct: 556 gagtaacgcaaacgttggtgagaatccaatgcctcgaaaacccaagggttcctc 609
>gb|AY848693.1| Vitis pseudoreticulata clone EST-4 23S ribosomal RNA, partial sequence; chloroplast Length = 673 Score = 511 bits (258), Expect = e-142 Identities = 317/336 (94%), Gaps = 8/336 (2%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 345 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 403 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 ||||||||||||||||| || || |||| |||||||||||||||||||||||| Sbjct: 404 aactctgaatactagatctggcctcaaaa-------ggtcaaggtcggccagtgagacga 456 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 457 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 516 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 517 atgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaa 576 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 577 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 636 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatg 336 |||||||||||||||||||||||||||||||||||| Sbjct: 637 gaacggggctaagcgatctgccgaagctgtgggatg 672
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 507 bits (256), Expect = e-140 Identities = 343/372 (92%) Strand = Plus / Plus Query: 109 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 168 |||||||||||||| ||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 144899 ccagtgagacgatgagggataagcttcaccgtcgagaggggaacagcccagatcaccagc 144958 Query: 169 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 228 |||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||| Sbjct: 144959 taaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagccaggag 145018 Query: 229 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 288 |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| || Sbjct: 145019 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctct 145078 Query: 289 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 348 ||||| |||||||| |||| ||||||| |||||||||||||||||||||||||| |||| Sbjct: 145079 tgcgccgaagatgagcgggactaagcggtctgccgaagctgtgggatgtcaaaaaacatc 145138 Query: 349 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 408 ||||||||||||||||||| ||| ||||||| | | | ||| || || |||||||||| Sbjct: 145139 ggtaggggagcgttccgccccagatggaagcaccagtgcgagcaggtgtggacgaagcgg 145198 Query: 409 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 145199 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 145258 Query: 469 caaggtttcctc 480 |||| |||||| Sbjct: 145259 taagggttcctc 145270 Score = 507 bits (256), Expect = e-140 Identities = 343/372 (92%) Strand = Plus / Minus Query: 109 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 168 |||||||||||||| ||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 87952 ccagtgagacgatgagggataagcttcaccgtcgagaggggaacagcccagatcaccagc 87893 Query: 169 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 228 |||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||| Sbjct: 87892 taaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagccaggag 87833 Query: 229 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 288 |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| || Sbjct: 87832 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctct 87773 Query: 289 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 348 ||||| |||||||| |||| ||||||| |||||||||||||||||||||||||| |||| Sbjct: 87772 tgcgccgaagatgagcgggactaagcggtctgccgaagctgtgggatgtcaaaaaacatc 87713 Query: 349 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 408 ||||||||||||||||||| ||| ||||||| | | | ||| || || |||||||||| Sbjct: 87712 ggtaggggagcgttccgccccagatggaagcaccagtgcgagcaggtgtggacgaagcgg 87653 Query: 409 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87652 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 87593 Query: 469 caaggtttcctc 480 |||| |||||| Sbjct: 87592 taagggttcctc 87581 Score = 113 bits (57), Expect = 5e-22 Identities = 73/77 (94%), Gaps = 1/77 (1%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| ||| ||| |||||||||||||| ||||||||||||||||||||| Sbjct: 144785 catctaggggtaaag-caccgttccggtgcgggctgcgagagcggtaccaaatcgaggca 144843 Query: 61 aactctgaatactagat 77 ||||||||||||||||| Sbjct: 144844 aactctgaatactagat 144860 Score = 113 bits (57), Expect = 5e-22 Identities = 73/77 (94%), Gaps = 1/77 (1%) Strand = Plus / Minus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| ||| ||| |||||||||||||| ||||||||||||||||||||| Sbjct: 88066 catctaggggtaaag-caccgttccggtgcgggctgcgagagcggtaccaaatcgaggca 88008 Query: 61 aactctgaatactagat 77 ||||||||||||||||| Sbjct: 88007 aactctgaatactagat 87991
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 507 bits (256), Expect = e-140 Identities = 343/372 (92%) Strand = Plus / Plus Query: 109 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 168 |||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||| Sbjct: 955 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcaccagc 1014 Query: 169 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 228 ||||||||||||||||||||| |||| | |||||||| |||||||||||||||||||||| Sbjct: 1015 taaggcccctaaatgaccgctaagtggtgaaggaggtaggggtgcaaagacagccaggag 1074 Query: 229 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 288 ||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| || Sbjct: 1075 gtttgcctagaagcagccatccttgaaagagtgcgtaatagctcactgatcaagcgctct 1134 Query: 289 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 348 ||||| ||||||||| ||| ||||||| ||||||||||||||||||||||||||| |||| Sbjct: 1135 tgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcaaaatacatc 1194 Query: 349 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 408 ||||||||||||||||||||||||| ||||| | ||| ||| || || |||||||||| Sbjct: 1195 ggtaggggagcgttccgccttagagagaagcgccagcgtgagcaggtgtggacgaagcgg 1254 Query: 409 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 468 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1255 aagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacc 1314 Query: 469 caaggtttcctc 480 |||| |||||| Sbjct: 1315 taagggttcctc 1326 Score = 113 bits (57), Expect = 5e-22 Identities = 73/77 (94%), Gaps = 1/77 (1%) Strand = Plus / Plus Query: 2 atctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 61 |||||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||| Sbjct: 850 atctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaa 908 Query: 62 actctgaatactagata 78 |||||||||||| |||| Sbjct: 909 actctgaatactggata 925
>gb|AC105747.4| Oryza sativa chromosome 3 BAC OSJNBb0101N11 genomic sequence, complete sequence Length = 138345 Score = 505 bits (255), Expect = e-140 Identities = 258/259 (99%) Strand = Plus / Minus Query: 222 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 281 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20870 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 20811 Query: 282 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 341 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20810 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 20751 Query: 342 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 401 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20750 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 20691 Query: 402 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 461 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20690 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccct 20631 Query: 462 gaaaacccaaggtttcctc 480 ||||||||||||||||||| Sbjct: 20630 gaaaacccaaggtttcctc 20612
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 504 bits (254), Expect = e-139 Identities = 348/378 (92%), Gaps = 1/378 (0%) Strand = Plus / Minus Query: 103 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 162 |||| ||||||||||| ||||||||||||||||| |||||||||| |||||||| |||| Sbjct: 115246 ggtcagccagtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatc 115187 Query: 163 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 222 |||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||| Sbjct: 115186 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagc 115127 Query: 223 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 282 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 115126 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 115067 Query: 283 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 342 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||||||| Sbjct: 115066 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcaaaa 115007 Query: 343 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 402 | ||||||||||||||||||||||||||| | ||||| | | || ||| || || |||| Sbjct: 115006 tacatcggtaggggagcgttccgccttagggagaagc-atcacgtgagcaggtgtggacg 114948 Query: 403 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 462 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 114947 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 114888 Query: 463 aaaacccaaggtttcctc 480 |||||| |||| |||||| Sbjct: 114887 aaaacctaagggttcctc 114870 Score = 504 bits (254), Expect = e-139 Identities = 348/378 (92%), Gaps = 1/378 (0%) Strand = Plus / Plus Query: 103 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 162 |||| ||||||||||| ||||||||||||||||| |||||||||| |||||||| |||| Sbjct: 86874 ggtcagccagtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatc 86933 Query: 163 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 222 |||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||| Sbjct: 86934 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagc 86993 Query: 223 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 282 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 86994 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 87053 Query: 283 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 342 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||||||| Sbjct: 87054 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcaaaa 87113 Query: 343 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 402 | ||||||||||||||||||||||||||| | ||||| | | || ||| || || |||| Sbjct: 87114 tacatcggtaggggagcgttccgccttagggagaagc-atcacgtgagcaggtgtggacg 87172 Query: 403 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 462 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 87173 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 87232 Query: 463 aaaacccaaggtttcctc 480 |||||| |||| |||||| Sbjct: 87233 aaaacctaagggttcctc 87250 Score = 123 bits (62), Expect = 6e-25 Identities = 72/74 (97%), Gaps = 1/74 (1%) Strand = Plus / Minus Query: 2 atctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 61 |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 115347 atctaggggtaaag-cactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaa 115289 Query: 62 actctgaatactag 75 |||||||||||||| Sbjct: 115288 actctgaatactag 115275 Score = 123 bits (62), Expect = 6e-25 Identities = 72/74 (97%), Gaps = 1/74 (1%) Strand = Plus / Plus Query: 2 atctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 61 |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 86773 atctaggggtaaag-cactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaa 86831 Query: 62 actctgaatactag 75 |||||||||||||| Sbjct: 86832 actctgaatactag 86845
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 488 bits (246), Expect = e-135 Identities = 412/466 (88%), Gaps = 1/466 (0%) Strand = Plus / Minus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 |||||||| |||||| |||||||||||||||||| | |||| ||||||||| |||||| Sbjct: 2961 catctaggagtaaag-cactgtttcggtgcgggcaatgagagcagtaccaaattgaggca 2903 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 ||||||||||| |||||| || | ||||| ||| |||||||||||||| |||||||||| Sbjct: 2902 aactctgaatattagatacgatctcaaaatcacaagggtcaaggtcggcgagtgagacga 2843 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 | |||||||||||||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 2842 cgagggataagcttcatcgtcgagagggaaacaacctggatcaccagctaaggcccctaa 2783 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 2782 atgactgctcagtgataaaggaggtaggggtgcaaagacagccaggaggtttgcctagaa 2723 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 ||| |||||||| ||| |||||||||||||||||| ||||||||| ||||| | ||||| Sbjct: 2722 gcaaccacccttgaaaaagtgcgtaatagctcactaatcgagcgcacttgcaccaaagat 2663 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||| ||||||||||||||| |||||| |||||||||||||||||||| |||||||||| Sbjct: 2662 gaattgggctaagcgatctgttgaagctatgggatgtcaaaatgcatcgataggggagcg 2603 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 |||||||||||||||||||| | || || | ||| || || ||||||||| |||||| Sbjct: 2602 ttccgccttagagggaagcacctgcacgagtagtggtggaagaggcggaagcgggaatgt 2543 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 466 |||||| ||| | ||||||||||||||||||||||||| ||||| Sbjct: 2542 cggcttttttaaggcaaacattggtgagaatccaatgccctgaaaa 2497
>gb|DQ176643.1| Vitis pseudoreticulata clone EST-423 23S ribosomal RNA, partial sequence; chloroplast Length = 674 Score = 484 bits (244), Expect = e-133 Identities = 303/322 (94%), Gaps = 8/322 (2%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 361 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 419 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 ||||||||||||||||| || || |||| |||||||||||||||||||||||| Sbjct: 420 aactctgaatactagatctggcctcaaaa-------ggtcaaggtcggccagtgagacga 472 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 473 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 532 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 533 atgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaa 592 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 593 gcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 652 Query: 301 gaacggggctaagcgatctgcc 322 |||||||||||||||||||||| Sbjct: 653 gaacggggctaagcgatctgcc 674
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 482 bits (243), Expect = e-133 Identities = 416/471 (88%), Gaps = 7/471 (1%) Strand = Plus / Minus Query: 17 cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 76 ||||||| |||||||||||||| |||| |||||||| |||||||||||||||||||| | Sbjct: 138390 cactgttacggtgcgggctgcgagagcagtaccaaaccgaggcaaactctgaatactggg 138331 Query: 77 tatgacccaaaaataacagg--ggtcaaggtcggccagtgagacgatgggggataagctt 134 |||| ||| | | | ||| | ||| ||||||||||||||||||| |||||||||||||| Sbjct: 138330 tatggccccagagtcacacgagggtgaaggtcggccagtgagacggtgggggataagctt 138271 Query: 135 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 194 || ||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 138270 caccgtcgagaggggaacagcccagatcaccagctaaggcccctgaatgaccgctcagtg 138211 Query: 195 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 254 | |||||||| || |||||||||||||| ||||||||||| |||||||||||||||| | Sbjct: 138210 gtgaaggaggtaggagtgcaaagacagccgggaggtttgcccagaagcagccacccttga 138151 Query: 255 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 314 ||||||||||| ||||||||||||| ||||| | ||||| || |||||||||| |||||| Sbjct: 138150 aagagtgcgtagtagctcactgatcaagcgctcctgcgccgaggatgaacgggactaagc 138091 Query: 315 gatctgccgaagctgtgggatgtc--aaaatgcatcggtaggggagcgttccgcct---t 369 | |||||||||||||||||||||| | ||| |||||||||||||||||||||||| Sbjct: 138090 ggtctgccgaagctgtgggatgtcgaacaatacatcggtaggggagcgttccgcctcgga 138031 Query: 370 agagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgag 429 |||||||||| | ||| ||| || | |||||||||||||||||| |||||||||||| Sbjct: 138030 ggagggaagcaccagcgcgagcaggtgcggacgaagcggaagcgagagtgtcggcttgag 137971 Query: 430 taacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 ||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 137970 taacgcaaacattggtgagaatccaatgccccgaaaacccaagggttcctc 137920 Score = 482 bits (243), Expect = e-133 Identities = 416/471 (88%), Gaps = 7/471 (1%) Strand = Plus / Plus Query: 17 cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 76 ||||||| |||||||||||||| |||| |||||||| |||||||||||||||||||| | Sbjct: 83487 cactgttacggtgcgggctgcgagagcagtaccaaaccgaggcaaactctgaatactggg 83546 Query: 77 tatgacccaaaaataacagg--ggtcaaggtcggccagtgagacgatgggggataagctt 134 |||| ||| | | | ||| | ||| ||||||||||||||||||| |||||||||||||| Sbjct: 83547 tatggccccagagtcacacgagggtgaaggtcggccagtgagacggtgggggataagctt 83606 Query: 135 catcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 194 || ||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 83607 caccgtcgagaggggaacagcccagatcaccagctaaggcccctgaatgaccgctcagtg 83666 Query: 195 ataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 254 | |||||||| || |||||||||||||| ||||||||||| |||||||||||||||| | Sbjct: 83667 gtgaaggaggtaggagtgcaaagacagccgggaggtttgcccagaagcagccacccttga 83726 Query: 255 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 314 ||||||||||| ||||||||||||| ||||| | ||||| || |||||||||| |||||| Sbjct: 83727 aagagtgcgtagtagctcactgatcaagcgctcctgcgccgaggatgaacgggactaagc 83786 Query: 315 gatctgccgaagctgtgggatgtc--aaaatgcatcggtaggggagcgttccgcct---t 369 | |||||||||||||||||||||| | ||| |||||||||||||||||||||||| Sbjct: 83787 ggtctgccgaagctgtgggatgtcgaacaatacatcggtaggggagcgttccgcctcgga 83846 Query: 370 agagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgag 429 |||||||||| | ||| ||| || | |||||||||||||||||| |||||||||||| Sbjct: 83847 ggagggaagcaccagcgcgagcaggtgcggacgaagcggaagcgagagtgtcggcttgag 83906 Query: 430 taacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 ||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 83907 taacgcaaacattggtgagaatccaatgccccgaaaacccaagggttcctc 83957
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 464 bits (234), Expect = e-127 Identities = 342/378 (90%) Strand = Plus / Minus Query: 103 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 162 |||| ||||||||||||||| |||||||||||||||||| |||||| |||||||| ||| Sbjct: 5602 ggtcagccagtgagacgatgagggataagcttcatcgtcaagaggggaacagcccagatt 5543 Query: 163 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 222 ||||| |||||||||||||||||||||||||||| ||||| || | ||||||||||||| Sbjct: 5542 accagataaggcccctaaatgaccgctcagtgatgaaggatgtatgagtgcaaagacagc 5483 Query: 223 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 282 |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 5482 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagcttactgatcgag 5423 Query: 283 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 342 ||| ||||| | ||||||||||||| ||||||||||||||||||||||||||| || ||| Sbjct: 5422 cgctcttgcaccgaagatgaacgggactaagcgatctgccgaagctgtgggatatctaaa 5363 Query: 343 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 402 ||||||||||||||||||||| | |||| |||||| ||||| ||| || || |||| Sbjct: 5362 aacatcggtaggggagcgttccgtttcagagagaagcacccgcgcgagcaggtgtggacg 5303 Query: 403 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 462 ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 5302 aagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 5243 Query: 463 aaaacccaaggtttcctc 480 |||||| |||| |||||| Sbjct: 5242 aaaacctaagggttcctc 5225 Score = 60.0 bits (30), Expect = 7e-06 Identities = 67/78 (85%), Gaps = 1/78 (1%) Strand = Plus / Minus Query: 3 tctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 62 ||||||||||||| |||||||||||| ||| | | |||||||| | ||||||||||| Sbjct: 5683 tctaggggtaaag-cactgtttcggtataggccgtgtaagcggtacgacatcgaggcaaa 5625 Query: 63 ctctgaatactagatatg 80 || ||||||||||||||| Sbjct: 5624 ctatgaatactagatatg 5607
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 464 bits (234), Expect = e-127 Identities = 340/375 (90%), Gaps = 4/375 (1%) Strand = Plus / Plus Query: 110 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 169 |||||||||| ||||||||||||||||||||| | ||||||||||||| |||||| |||| Sbjct: 912 cagtgagacggtgggggataagcttcatcgtcaaaagggaaacagcccagatcactagct 971 Query: 170 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 229 |||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||| Sbjct: 972 aaggccccaaaatgaccgctcagtgataaaggaggtgggagtgcaaagacatccaggagg 1031 Query: 230 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 289 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 1032 tttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctctt 1091 Query: 290 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc----aaaatgc 345 |||| ||||||||| ||| ||||||| |||||||||||||||||||||| | || Sbjct: 1092 gcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtctattataagat 1151 Query: 346 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 405 ||||||||||||||||||||||||||| |||||| ||| |||| | || ||||||| Sbjct: 1152 atcggtaggggagcgttccgccttagatagaagcattagcgtaagcagatgtggacgaag 1211 Query: 406 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 465 |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1212 cggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaa 1271 Query: 466 acccaaggtttcctc 480 |||||||| |||||| Sbjct: 1272 acccaagggttcctc 1286 Score = 111 bits (56), Expect = 2e-21 Identities = 72/76 (94%), Gaps = 1/76 (1%) Strand = Plus / Plus Query: 5 taggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 64 ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 822 taggggtaaag-cactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaact 880 Query: 65 ctgaatactagatatg 80 ||||||||||| |||| Sbjct: 881 ctgaatactaggtatg 896
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 462 bits (233), Expect = e-127 Identities = 344/380 (90%), Gaps = 2/380 (0%) Strand = Plus / Plus Query: 103 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 162 |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| || | Sbjct: 946 ggtcagccagtaagacggtgggggataagcttcatcgtcgagagggaaacagcccagacc 1005 Query: 163 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 222 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1006 accagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagc 1065 Query: 223 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 282 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1066 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 1125 Query: 283 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc--aa 340 ||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 1126 cgctcttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtccgtt 1185 Query: 341 aatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcga 400 | ||||||||||||||||||||||| || | |||||| | | | || | || || || Sbjct: 1186 agggcatcggtaggggagcgttccgcaaaagggagaagcatcagtgcaaacaggtgtgga 1245 Query: 401 cgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccc 460 ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1246 cgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccc 1305 Query: 461 cgaaaacccaaggtttcctc 480 ||||||||||||| |||||| Sbjct: 1306 cgaaaacccaagggttcctc 1325 Score = 111 bits (56), Expect = 2e-21 Identities = 69/72 (95%), Gaps = 1/72 (1%) Strand = Plus / Plus Query: 4 ctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 63 |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 865 ctaggggtaaag-cactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaac 923 Query: 64 tctgaatactag 75 |||||||||||| Sbjct: 924 tctgaatactag 935
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 462 bits (233), Expect = e-127 Identities = 344/380 (90%), Gaps = 2/380 (0%) Strand = Plus / Plus Query: 103 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 162 |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| || | Sbjct: 959 ggtcagccagtaagacggtgggggataagcttcatcgtcgagagggaaacagcccagacc 1018 Query: 163 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 222 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1019 accagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagc 1078 Query: 223 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 282 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1079 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 1138 Query: 283 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc--aa 340 ||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 1139 cgctcttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtccgtt 1198 Query: 341 aatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcga 400 | ||||||||||||||||||||||| || | |||||| | | | || | || || || Sbjct: 1199 agggcatcggtaggggagcgttccgcaaaagggagaagcatcagtgcaaacaggtgtgga 1258 Query: 401 cgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccc 460 ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1259 cgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccc 1318 Query: 461 cgaaaacccaaggtttcctc 480 ||||||||||||| |||||| Sbjct: 1319 cgaaaacccaagggttcctc 1338 Score = 111 bits (56), Expect = 2e-21 Identities = 69/72 (95%), Gaps = 1/72 (1%) Strand = Plus / Plus Query: 4 ctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 63 |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 878 ctaggggtaaag-cactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaac 936 Query: 64 tctgaatactag 75 |||||||||||| Sbjct: 937 tctgaatactag 948
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 460 bits (232), Expect = e-126 Identities = 340/375 (90%), Gaps = 2/375 (0%) Strand = Plus / Plus Query: 108 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 167 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 953 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 1012 Query: 168 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 227 ||||||||||||||||||||||||||| |||||||||| | ||||| |||||||||||| Sbjct: 1013 ctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagccagga 1072 Query: 228 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 287 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 1073 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctc 1132 Query: 288 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc--aaaatgc 345 |||||| ||||||||||||| ||||||| |||||||||||||||||||||| |||| | Sbjct: 1133 ttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcaaaaaagac 1192 Query: 346 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 405 |||||||||||||||||| || ||| | |||||| |||||||| | || ||||||| Sbjct: 1193 atcggtaggggagcgttctgctgtagggagaagcattagcgaaagcagatgtggacgaag 1252 Query: 406 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 465 |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1253 cggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaa 1312 Query: 466 acccaaggtttcctc 480 ||| |||| |||||| Sbjct: 1313 acctaagggttcctc 1327 Score = 111 bits (56), Expect = 2e-21 Identities = 69/72 (95%), Gaps = 1/72 (1%) Strand = Plus / Plus Query: 4 ctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 63 |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 866 ctaggggtaaag-cactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaac 924 Query: 64 tctgaatactag 75 |||||||||||| Sbjct: 925 tctgaatactag 936
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 454 bits (229), Expect = e-124 Identities = 343/380 (90%), Gaps = 2/380 (0%) Strand = Plus / Plus Query: 103 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 162 |||| |||||| ||||| ||||||||||||||||||||| ||||||||||||||| || | Sbjct: 1063 ggtcagccagtaagacggtgggggataagcttcatcgtcaagagggaaacagcccagacc 1122 Query: 163 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 222 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1123 accagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagc 1182 Query: 223 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 282 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1183 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 1242 Query: 283 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaa-- 340 ||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| | Sbjct: 1243 cgctcttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtccatt 1302 Query: 341 aatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcga 400 | ||||||||||||||||||||||| | | |||||| | | | || | || || || Sbjct: 1303 agggcatcggtaggggagcgttccgcaaacgggagaagcatcagtgtaaacaggtgtgga 1362 Query: 401 cgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccc 460 ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1363 cgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccc 1422 Query: 461 cgaaaacccaaggtttcctc 480 ||||||||||||| |||||| Sbjct: 1423 cgaaaacccaagggttcctc 1442 Score = 111 bits (56), Expect = 2e-21 Identities = 69/72 (95%), Gaps = 1/72 (1%) Strand = Plus / Plus Query: 4 ctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 63 |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 982 ctaggggtaaag-cactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaac 1040 Query: 64 tctgaatactag 75 |||||||||||| Sbjct: 1041 tctgaatactag 1052
>dbj|AK058658.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-F10, full insert sequence Length = 1383 Score = 454 bits (229), Expect = e-124 Identities = 229/229 (100%) Strand = Plus / Plus Query: 252 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 60 Query: 312 agcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 120 Query: 372 agggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagta 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 agggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagta 180 Query: 432 acgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 acgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 229
>gb|DQ481232.1| Populus suaveolens unknown gene Length = 854 Score = 450 bits (227), Expect = e-123 Identities = 277/291 (95%), Gaps = 2/291 (0%) Strand = Plus / Plus Query: 190 cagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacc 249 |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1 cagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacc 60 Query: 250 ctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggc 309 ||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 61 cttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgc-gaagatgaacggggc 119 Query: 310 taagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcctt 369 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 120 taagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccg-ctt 178 Query: 370 agagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgag 429 ||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 179 agagggaagcacccgcgcgagcgggggtggacgaagcggaagcgagaatgtcggcttgag 238 Query: 430 taacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 480 ||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 239 taacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 289
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 444 bits (224), Expect = e-121 Identities = 338/375 (90%), Gaps = 2/375 (0%) Strand = Plus / Minus Query: 108 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 167 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 124312 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 124253 Query: 168 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 227 ||||||||||||||||||||||||||| |||||||||| | ||||| |||||||||||| Sbjct: 124252 ctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagccagga 124193 Query: 228 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 287 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 124192 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctc 124133 Query: 288 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat--gc 345 |||||| ||||||||||||| ||||||| ||||||||||||||||||||||| | | Sbjct: 124132 ttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcatttttgac 124073 Query: 346 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 405 |||||||||||||||||| || ||| | |||||| |||||||| | || ||||||| Sbjct: 124072 atcggtaggggagcgttctgctgtagggagaagcattagcgaaagcagatgtggacgaag 124013 Query: 406 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 465 |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 124012 cggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaa 123953 Query: 466 acccaaggtttcctc 480 ||| |||| |||||| Sbjct: 123952 acctaagggttcctc 123938 Score = 444 bits (224), Expect = e-121 Identities = 338/375 (90%), Gaps = 2/375 (0%) Strand = Plus / Plus Query: 108 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 167 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 95554 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 95613 Query: 168 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 227 ||||||||||||||||||||||||||| |||||||||| | ||||| |||||||||||| Sbjct: 95614 ctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagccagga 95673 Query: 228 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 287 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 95674 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctc 95733 Query: 288 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat--gc 345 |||||| ||||||||||||| ||||||| ||||||||||||||||||||||| | | Sbjct: 95734 ttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcatttttgac 95793 Query: 346 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 405 |||||||||||||||||| || ||| | |||||| |||||||| | || ||||||| Sbjct: 95794 atcggtaggggagcgttctgctgtagggagaagcattagcgaaagcagatgtggacgaag 95853 Query: 406 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 465 |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 95854 cggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaa 95913 Query: 466 acccaaggtttcctc 480 ||| |||| |||||| Sbjct: 95914 acctaagggttcctc 95928 Score = 103 bits (52), Expect = 5e-19 Identities = 68/72 (94%), Gaps = 1/72 (1%) Strand = Plus / Minus Query: 4 ctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 63 |||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 124399 ctaggggtaaag-cactgtttcggtgcgggctgcgaaagcggtaccaaatcgagtcaaac 124341 Query: 64 tctgaatactag 75 |||||||||||| Sbjct: 124340 tctgaatactag 124329 Score = 103 bits (52), Expect = 5e-19 Identities = 68/72 (94%), Gaps = 1/72 (1%) Strand = Plus / Plus Query: 4 ctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 63 |||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 95467 ctaggggtaaag-cactgtttcggtgcgggctgcgaaagcggtaccaaatcgagtcaaac 95525 Query: 64 tctgaatactag 75 |||||||||||| Sbjct: 95526 tctgaatactag 95537
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 438 bits (221), Expect = e-120 Identities = 335/373 (89%), Gaps = 5/373 (1%) Strand = Plus / Plus Query: 107 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 166 |||||||||||| |||||||||||||||||||||| |||||| |||||||| |||||||| Sbjct: 1000 ggccagtgagaccatgggggataagcttcatcgtcaagaggggaacagcccagatcacca 1059 Query: 167 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 226 ||||||||||||||||||||||| ||| ||||||||||| |||||||| ||||||||||| Sbjct: 1060 gctaaggcccctaaatgaccgctaagttataaaggaggtaggggtgcatagacagccagg 1119 Query: 227 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 286 ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1120 aggtttgcctagaagaagccaccctttaaagagtgcgtaatagctaactgatcgagcgct 1179 Query: 287 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgca 346 ||||||| ||| ||||||||| ||||||||| |||||||||||||||||| | || Sbjct: 1180 cttgcgccgaatatgaacgggaataagcgatccgccgaagctgtgggatgtaa-----ca 1234 Query: 347 tcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagc 406 ||||||||||||||||| |||||| ||||||||| | || ||| | ||| || ||||| Sbjct: 1235 tcggtaggggagcgttctgccttatagggaagcacctgcacgagcagtggtggatgaagc 1294 Query: 407 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 466 |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1295 agaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaa 1354 Query: 467 cccaaggtttcct 479 || |||| ||||| Sbjct: 1355 cctaagggttcct 1367 Score = 99.6 bits (50), Expect = 8e-18 Identities = 75/82 (91%), Gaps = 1/82 (1%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| ||||||||||||||||| || |||||||||||||| |||||| Sbjct: 877 catctaggggtaaag-cactgtttcggtgcgggtctcgagagcggtaccaaattgaggca 935 Query: 61 aactctgaatactagatatgac 82 |||| ||||||||||||||||| Sbjct: 936 aactatgaatactagatatgac 957
>dbj|AK105825.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-E01, full insert sequence Length = 1345 Score = 436 bits (220), Expect = e-119 Identities = 220/220 (100%) Strand = Plus / Plus Query: 261 gcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctg 320 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctg 60 Query: 321 ccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagca 380 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagca 120 Query: 381 accgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaaca 440 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 accgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaaca 180 Query: 441 ttggtgagaatccaatgccccgaaaacccaaggtttcctc 480 |||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ttggtgagaatccaatgccccgaaaacccaaggtttcctc 220
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 424 bits (214), Expect = e-115 Identities = 331/370 (89%) Strand = Plus / Plus Query: 111 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 170 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 5005 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 5064 Query: 171 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 230 ||||||||||||| ||||| |||| ||||||||||||| ||||||||||| ||| |||| Sbjct: 5065 aggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagacaatcagtaggt 5124 Query: 231 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 290 ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| |||| Sbjct: 5125 ttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctcttg 5184 Query: 291 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 350 ||| ||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||| Sbjct: 5185 cgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtaaaataacatcgg 5244 Query: 351 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 410 |||||||||||||||| ||| | |||||| | | | || | || || |||||||||||| Sbjct: 5245 taggggagcgttccgctctagggagaagcatcagtgtaaacaggtgtggacgaagcggaa 5304 Query: 411 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccca 470 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 5305 gcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaaccta 5364 Query: 471 aggtttcctc 480 ||| |||||| Sbjct: 5365 agggttcctc 5374 Score = 87.7 bits (44), Expect = 3e-14 Identities = 63/68 (92%), Gaps = 1/68 (1%) Strand = Plus / Plus Query: 6 aggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 65 |||||||||| ||||||||||||||||||| || || |||||||||||||||||||||| Sbjct: 4917 aggggtaaag-cactgtttcggtgcgggctacgaaagtggtaccaaatcgaggcaaactc 4975 Query: 66 tgaatact 73 |||||||| Sbjct: 4976 tgaatact 4983
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 424 bits (214), Expect = e-115 Identities = 331/370 (89%) Strand = Plus / Plus Query: 111 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 170 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 972 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 1031 Query: 171 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 230 ||||||||||||| ||||| |||| ||||||||||||| ||||||||||| ||| |||| Sbjct: 1032 aggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagacaatcagtaggt 1091 Query: 231 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 290 ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| |||| Sbjct: 1092 ttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctcttg 1151 Query: 291 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 350 ||| ||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||| Sbjct: 1152 cgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtaaaataacatcgg 1211 Query: 351 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 410 |||||||||||||||| ||| | |||||| | | | || | || || |||||||||||| Sbjct: 1212 taggggagcgttccgctctagggagaagcatcagtgtaaacaggtgtggacgaagcggaa 1271 Query: 411 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccca 470 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 1272 gcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaaccta 1331 Query: 471 aggtttcctc 480 ||| |||||| Sbjct: 1332 agggttcctc 1341 Score = 87.7 bits (44), Expect = 3e-14 Identities = 63/68 (92%), Gaps = 1/68 (1%) Strand = Plus / Plus Query: 6 aggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 65 |||||||||| ||||||||||||||||||| || || |||||||||||||||||||||| Sbjct: 884 aggggtaaag-cactgtttcggtgcgggctacgaaagtggtaccaaatcgaggcaaactc 942 Query: 66 tgaatact 73 |||||||| Sbjct: 943 tgaatact 950
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 416 bits (210), Expect = e-113 Identities = 330/370 (89%) Strand = Plus / Plus Query: 111 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 170 ||||||||| | |||||||||||| |||||| ||||||||||||||| || ||||||||| Sbjct: 967 agtgagacggtaggggataagctttatcgtcaagagggaaacagcccagaccaccagcta 1026 Query: 171 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 230 ||||||||||||| ||||| |||| ||||||||||||| ||||||||||| |||||||| Sbjct: 1027 aggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagacaatcaggaggt 1086 Query: 231 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 290 ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| || | Sbjct: 1087 ttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctctcg 1146 Query: 291 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 350 ||| ||||||||| ||| ||||||| |||||||||||||||||||| ||||| |||||| Sbjct: 1147 cgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgctaaaatacatcgg 1206 Query: 351 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 410 |||||||||||||||| ||| | |||||| | | | || | | || |||||||||||| Sbjct: 1207 taggggagcgttccgctctagggagaagcatcagtgtaaacagatgtggacgaagcggaa 1266 Query: 411 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccca 470 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 1267 gcgagaatgtcggcttgagtaacggaaacattggtgagaatccaatgccccgaaaaccta 1326 Query: 471 aggtttcctc 480 ||| |||||| Sbjct: 1327 agggttcctc 1336 Score = 97.6 bits (49), Expect = 3e-17 Identities = 68/73 (93%), Gaps = 1/73 (1%) Strand = Plus / Plus Query: 6 aggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 65 |||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 879 aggggtaaag-cactgtttcggtgcgggctgcgaaagcggtaccaaatcgagacaaactc 937 Query: 66 tgaatactagata 78 |||||||| |||| Sbjct: 938 tgaatactggata 950
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 416 bits (210), Expect = e-113 Identities = 330/370 (89%) Strand = Plus / Plus Query: 111 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 170 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 972 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 1031 Query: 171 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 230 ||||||||||||| ||||| |||| ||||| ||||||| ||||||||||| ||| |||| Sbjct: 1032 aggcccctaaatggccgctaagtggtaaagaaggtgggagtgcaaagacaatcagtaggt 1091 Query: 231 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 290 ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| |||| Sbjct: 1092 ttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctcttg 1151 Query: 291 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 350 ||| ||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||| Sbjct: 1152 cgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtaaaataacatcgg 1211 Query: 351 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 410 |||||||||||||||| ||| | |||||| | | | || | || || |||||||||||| Sbjct: 1212 taggggagcgttccgctctagggagaagcatcagtgtaaacaggtgtggacgaagcggaa 1271 Query: 411 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccca 470 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 1272 gcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaaccta 1331 Query: 471 aggtttcctc 480 ||| |||||| Sbjct: 1332 agggttcctc 1341 Score = 87.7 bits (44), Expect = 3e-14 Identities = 63/68 (92%), Gaps = 1/68 (1%) Strand = Plus / Plus Query: 6 aggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 65 |||||||||| ||||||||||||||||||| || || |||||||||||||||||||||| Sbjct: 884 aggggtaaag-cactgtttcggtgcgggctacgaaagtggtaccaaatcgaggcaaactc 942 Query: 66 tgaatact 73 |||||||| Sbjct: 943 tgaatact 950
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 414 bits (209), Expect = e-112 Identities = 334/375 (89%), Gaps = 3/375 (0%) Strand = Plus / Plus Query: 108 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 167 |||||||||||| ||||||||||||| ||||||||| ||||||||||||| ||||||||| Sbjct: 915 gccagtgagacggtgggggataagctccatcgtcgaaagggaaacagcccagatcaccag 974 Query: 168 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 227 ||||||||||||||||||||| |||||||||||| ||| | |||||||||||||||||| Sbjct: 975 ttaaggcccctaaatgaccgctaagtgataaaggatgtgagagtgcaaagacagccagga 1034 Query: 228 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 287 |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| | Sbjct: 1035 ggtttgcctagaagcagctacccttgaaagagtgcgtaatagctcactgatcgagcgctc 1094 Query: 288 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat---g 344 |||||| ||||||||| ||| ||||||| ||||||||||||||| ||||| |||| Sbjct: 1095 ttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgagatgtttaaatataa 1154 Query: 345 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 404 |||||||||||||||||||||| |||| |||||| ||| ||||| || ||| || Sbjct: 1155 catcggtaggggagcgttccgcattaggttgaagcactagcgtaagcgaatgtggacaaa 1214 Query: 405 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 464 ||||||| |||||||||||||||||||||| ||||| ||||||||||||| ||||||||| Sbjct: 1215 gcggaagtgagaatgtcggcttgagtaacgcaaacactggtgagaatccagtgccccgaa 1274 Query: 465 aacccaaggtttcct 479 ||||||||| ||||| Sbjct: 1275 aacccaaggattcct 1289 Score = 81.8 bits (41), Expect = 2e-12 Identities = 69/77 (89%), Gaps = 1/77 (1%) Strand = Plus / Plus Query: 5 taggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 64 ||||||||||| |||||||||||||||||||| | | ||||||||||| || ||||||| Sbjct: 829 taggggtaaag-cactgtttcggtgcgggctgtgaaaacggtaccaaattgatgcaaact 887 Query: 65 ctgaatactagatatga 81 |||||||||| |||||| Sbjct: 888 ctgaatactaaatatga 904
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 408 bits (206), Expect = e-111 Identities = 332/372 (89%), Gaps = 9/372 (2%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||| |||| ||| |||| ||||||||| |||||| Sbjct: 864 catctaggggtaaag-cactgtttcggttcgggtcgcgagagccgtaccaaattgaggca 922 Query: 61 aactctgaatactagatatgacc--caaaaataacaggggtcaaggtcggccagtgagac 118 |||| |||||||||||||||||| |||||||||||||| | ||||| | |||||||||| Sbjct: 923 aactatgaatactagatatgacctccaaaaataacagggataaaggtggaccagtgagac 982 Query: 119 gatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccct 178 ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 983 catgggggataagcttcatcgtcgagaggggaacagcccagatcaccagctaaggcccct 1042 Query: 179 aaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctag 238 ||||||||||| ||| ||||||||||| |||||||| ||||| ||||||||||||||||| Sbjct: 1043 aaatgaccgctaagttataaaggaggtaggggtgcatagacaaccaggaggtttgcctag 1102 Query: 239 aagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaag 298 ||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||| Sbjct: 1103 aagaagccaccctttaaagagtgcgtaatagctaactgatcgagcgctcttgcgccgaat 1162 Query: 299 atgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggag 358 ||||| ||| ||||||| | |||||||||||||||||| | ||||||||||||| Sbjct: 1163 atgaatgggaataagcgacccgccgaagctgtgggatgtaa------atcggtaggggag 1216 Query: 359 cgttccgcctta 370 ||||| |||||| Sbjct: 1217 cgttctgcctta 1228 Score = 115 bits (58), Expect = 1e-22 Identities = 73/78 (93%) Strand = Plus / Plus Query: 402 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 461 ||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1270 gaagcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgcccc 1329 Query: 462 gaaaacccaaggtttcct 479 ||||||| |||| ||||| Sbjct: 1330 gaaaacctaagggttcct 1347
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 396 bits (200), Expect = e-107 Identities = 411/479 (85%), Gaps = 8/479 (1%) Strand = Plus / Plus Query: 3 tctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 62 ||||||||||||| |||| ||||||||| || ||| |||||||||||||| |||||||| Sbjct: 841 tctaggggtaaag-cactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaa 899 Query: 63 ctctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacga 120 || |||||| |||||||||| ||||||||||||||| | ||||| | |||| ||||| | Sbjct: 900 ctatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcgagacca 959 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||| |||| ||| |||||| ||||||||||||||| Sbjct: 960 tgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaa 1019 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||| || ||| ||||||||||| |||||||| | ||| |||||| |||||||||||| Sbjct: 1020 atgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaa 1079 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 | ||||||| ||||||||||||||||||||| |||||||||| || |||| || ||| || Sbjct: 1080 gaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatat 1139 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||| ||||| ||| ||||||| ||||||||| | |||||| ||||||||| Sbjct: 1140 gaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcg 1194 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||| |||||| | ||||||| | || || | ||| || ||||| |||| |||||||| Sbjct: 1195 ttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtgagaatgt 1254 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 479 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| Sbjct: 1255 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggattcct 1313
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 396 bits (200), Expect = e-107 Identities = 411/479 (85%), Gaps = 8/479 (1%) Strand = Plus / Plus Query: 3 tctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 62 ||||||||||||| |||| ||||||||| || ||| |||||||||||||| |||||||| Sbjct: 842 tctaggggtaaag-cactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaa 900 Query: 63 ctctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacga 120 || |||||| |||||||||| ||||||||||||||| | ||||| | |||| ||||| | Sbjct: 901 ctatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcgagacca 960 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||| |||| ||| |||||| ||||||||||||||| Sbjct: 961 tgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaa 1020 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||| || ||| ||||||||||| |||||||| | ||| |||||| |||||||||||| Sbjct: 1021 atgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaa 1080 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 | ||||||| ||||||||||||||||||||| |||||||||| || |||| || ||| || Sbjct: 1081 gaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatat 1140 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||| ||||| ||| ||||||| ||||||||| | |||||| ||||||||| Sbjct: 1141 gaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcg 1195 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||| |||||| | ||||||| | || || | ||| || ||||| |||| |||||||| Sbjct: 1196 ttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtgagaatgt 1255 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 479 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| Sbjct: 1256 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggattcct 1314
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 396 bits (200), Expect = e-107 Identities = 411/479 (85%), Gaps = 8/479 (1%) Strand = Plus / Plus Query: 3 tctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 62 ||||||||||||| |||| ||||||||| || ||| |||||||||||||| |||||||| Sbjct: 842 tctaggggtaaag-cactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaa 900 Query: 63 ctctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacga 120 || |||||| |||||||||| ||||||||||||||| | ||||| | |||| ||||| | Sbjct: 901 ctatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcgagacca 960 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||| |||| ||| |||||| ||||||||||||||| Sbjct: 961 tgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaa 1020 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||| || ||| ||||||||||| |||||||| | ||| |||||| |||||||||||| Sbjct: 1021 atgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaa 1080 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 | ||||||| ||||||||||||||||||||| |||||||||| || |||| || ||| || Sbjct: 1081 gaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatat 1140 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||| ||||| ||| ||||||| ||||||||| | |||||| ||||||||| Sbjct: 1141 gaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcg 1195 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||| |||||| | ||||||| | || || | ||| || ||||| |||| |||||||| Sbjct: 1196 ttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtgagaatgt 1255 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 479 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| Sbjct: 1256 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggattcct 1314
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 396 bits (200), Expect = e-107 Identities = 411/479 (85%), Gaps = 8/479 (1%) Strand = Plus / Plus Query: 3 tctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 62 ||||||||||||| |||| ||||||||| || ||| |||||||||||||| |||||||| Sbjct: 842 tctaggggtaaag-cactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaa 900 Query: 63 ctctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacga 120 || |||||| |||||||||| ||||||||||||||| | ||||| | |||| ||||| | Sbjct: 901 ctatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcgagacca 960 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||| |||| ||| |||||| ||||||||||||||| Sbjct: 961 tgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaa 1020 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||| || ||| ||||||||||| |||||||| | ||| |||||| |||||||||||| Sbjct: 1021 atgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaa 1080 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 | ||||||| ||||||||||||||||||||| |||||||||| || |||| || ||| || Sbjct: 1081 gaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatat 1140 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||| ||||| ||| ||||||| ||||||||| | |||||| ||||||||| Sbjct: 1141 gaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcg 1195 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||| |||||| | ||||||| | || || | ||| || ||||| |||| |||||||| Sbjct: 1196 ttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtgagaatgt 1255 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 479 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| Sbjct: 1256 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggattcct 1314
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 396 bits (200), Expect = e-107 Identities = 411/479 (85%), Gaps = 8/479 (1%) Strand = Plus / Plus Query: 3 tctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 62 ||||||||||||| |||| ||||||||| || ||| |||||||||||||| |||||||| Sbjct: 842 tctaggggtaaag-cactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaa 900 Query: 63 ctctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacga 120 || |||||| |||||||||| ||||||||||||||| | ||||| | |||| ||||| | Sbjct: 901 ctatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcgagacca 960 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||| |||| ||| |||||| ||||||||||||||| Sbjct: 961 tgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaa 1020 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||| || ||| ||||||||||| |||||||| | ||| |||||| |||||||||||| Sbjct: 1021 atgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaa 1080 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 | ||||||| ||||||||||||||||||||| |||||||||| || |||| || ||| || Sbjct: 1081 gaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatat 1140 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||| ||||| ||| ||||||| ||||||||| | |||||| ||||||||| Sbjct: 1141 gaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcg 1195 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||| |||||| | ||||||| | || || | ||| || ||||| |||| |||||||| Sbjct: 1196 ttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtgagaatgt 1255 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 479 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| Sbjct: 1256 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggattcct 1314
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 396 bits (200), Expect = e-107 Identities = 411/479 (85%), Gaps = 8/479 (1%) Strand = Plus / Plus Query: 3 tctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 62 ||||||||||||| |||| ||||||||| || ||| |||||||||||||| |||||||| Sbjct: 841 tctaggggtaaag-cactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaa 899 Query: 63 ctctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacga 120 || |||||| |||||||||| ||||||||||||||| | ||||| | |||| ||||| | Sbjct: 900 ctatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcgagacca 959 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||| |||| ||| |||||| ||||||||||||||| Sbjct: 960 tgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaa 1019 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||| || ||| ||||||||||| |||||||| | ||| |||||| |||||||||||| Sbjct: 1020 atgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaa 1079 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 | ||||||| ||||||||||||||||||||| |||||||||| || |||| || ||| || Sbjct: 1080 gaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatat 1139 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||| ||||| ||| ||||||| ||||||||| | |||||| ||||||||| Sbjct: 1140 gaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcg 1194 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||| |||||| | ||||||| | || || | ||| || ||||| |||| |||||||| Sbjct: 1195 ttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtgagaatgt 1254 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 479 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| Sbjct: 1255 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggattcct 1313
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 396 bits (200), Expect = e-107 Identities = 411/479 (85%), Gaps = 8/479 (1%) Strand = Plus / Plus Query: 3 tctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 62 ||||||||||||| |||| ||||||||| || ||| |||||||||||||| |||||||| Sbjct: 842 tctaggggtaaag-cactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaa 900 Query: 63 ctctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacga 120 || |||||| |||||||||| ||||||||||||||| | ||||| | |||| ||||| | Sbjct: 901 ctatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcgagacca 960 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||| |||| ||| |||||| ||||||||||||||| Sbjct: 961 tgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaa 1020 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||| || ||| ||||||||||| |||||||| | ||| |||||| |||||||||||| Sbjct: 1021 atgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaa 1080 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 | ||||||| ||||||||||||||||||||| |||||||||| || |||| || ||| || Sbjct: 1081 gaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatat 1140 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||| ||||| ||| ||||||| ||||||||| | |||||| ||||||||| Sbjct: 1141 gaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcg 1195 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||| |||||| | ||||||| | || || | ||| || ||||| |||| |||||||| Sbjct: 1196 ttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtgagaatgt 1255 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 479 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| Sbjct: 1256 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggattcct 1314
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 396 bits (200), Expect = e-107 Identities = 411/479 (85%), Gaps = 8/479 (1%) Strand = Plus / Plus Query: 3 tctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 62 ||||||||||||| |||| ||||||||| || ||| |||||||||||||| |||||||| Sbjct: 842 tctaggggtaaag-cactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaa 900 Query: 63 ctctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacga 120 || |||||| |||||||||| ||||||||||||||| | ||||| | |||| ||||| | Sbjct: 901 ctatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcgagacca 960 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||| |||| ||| |||||| ||||||||||||||| Sbjct: 961 tgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaa 1020 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||| || ||| ||||||||||| |||||||| | ||| |||||| |||||||||||| Sbjct: 1021 atgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaa 1080 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 | ||||||| ||||||||||||||||||||| |||||||||| || |||| || ||| || Sbjct: 1081 gaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatat 1140 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||| ||||| ||| ||||||| ||||||||| | |||||| ||||||||| Sbjct: 1141 gaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcg 1195 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||| |||||| | ||||||| | || || | ||| || ||||| |||| |||||||| Sbjct: 1196 ttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtgagaatgt 1255 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 479 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| Sbjct: 1256 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggattcct 1314
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 396 bits (200), Expect = e-107 Identities = 411/479 (85%), Gaps = 8/479 (1%) Strand = Plus / Plus Query: 3 tctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 62 ||||||||||||| |||| ||||||||| || ||| |||||||||||||| |||||||| Sbjct: 841 tctaggggtaaag-cactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaa 899 Query: 63 ctctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacga 120 || |||||| |||||||||| ||||||||||||||| | ||||| | |||| ||||| | Sbjct: 900 ctatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcgagacca 959 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||| |||| ||| |||||| ||||||||||||||| Sbjct: 960 tgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaa 1019 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||| || ||| ||||||||||| |||||||| | ||| |||||| |||||||||||| Sbjct: 1020 atgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaa 1079 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 | ||||||| ||||||||||||||||||||| |||||||||| || |||| || ||| || Sbjct: 1080 gaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatat 1139 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||| ||||| ||| ||||||| ||||||||| | |||||| ||||||||| Sbjct: 1140 gaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcg 1194 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||| |||||| | ||||||| | || || | ||| || ||||| |||| |||||||| Sbjct: 1195 ttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtgagaatgt 1254 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 479 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| Sbjct: 1255 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggattcct 1313
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 396 bits (200), Expect = e-107 Identities = 411/479 (85%), Gaps = 8/479 (1%) Strand = Plus / Plus Query: 3 tctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 62 ||||||||||||| |||| ||||||||| || ||| |||||||||||||| |||||||| Sbjct: 842 tctaggggtaaag-cactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaa 900 Query: 63 ctctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacga 120 || |||||| |||||||||| ||||||||||||||| | ||||| | |||| ||||| | Sbjct: 901 ctatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcgagacca 960 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||| |||| ||| |||||| ||||||||||||||| Sbjct: 961 tgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaa 1020 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||| || ||| ||||||||||| |||||||| | ||| |||||| |||||||||||| Sbjct: 1021 atgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaa 1080 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 | ||||||| ||||||||||||||||||||| |||||||||| || |||| || ||| || Sbjct: 1081 gaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatat 1140 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||| ||||| ||| ||||||| ||||||||| | |||||| ||||||||| Sbjct: 1141 gaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcg 1195 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||| |||||| | ||||||| | || || | ||| || ||||| |||| |||||||| Sbjct: 1196 ttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtgagaatgt 1255 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 479 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| Sbjct: 1256 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggattcct 1314
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 396 bits (200), Expect = e-107 Identities = 411/479 (85%), Gaps = 8/479 (1%) Strand = Plus / Plus Query: 3 tctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 62 ||||||||||||| |||| ||||||||| || ||| |||||||||||||| |||||||| Sbjct: 842 tctaggggtaaag-cactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaa 900 Query: 63 ctctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacga 120 || |||||| |||||||||| ||||||||||||||| | ||||| | |||| ||||| | Sbjct: 901 ctatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcgagacca 960 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||| |||| ||| |||||| ||||||||||||||| Sbjct: 961 tgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaa 1020 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||| || ||| ||||||||||| |||||||| | ||| |||||| |||||||||||| Sbjct: 1021 atgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaa 1080 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 | ||||||| ||||||||||||||||||||| |||||||||| || |||| || ||| || Sbjct: 1081 gaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatat 1140 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||| ||||| ||| ||||||| ||||||||| | |||||| ||||||||| Sbjct: 1141 gaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcg 1195 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||| |||||| | ||||||| | || || | ||| || ||||| |||| |||||||| Sbjct: 1196 ttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtgagaatgt 1255 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 479 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| Sbjct: 1256 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggattcct 1314
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 396 bits (200), Expect = e-107 Identities = 411/479 (85%), Gaps = 8/479 (1%) Strand = Plus / Plus Query: 3 tctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 62 ||||||||||||| |||| ||||||||| || ||| |||||||||||||| |||||||| Sbjct: 842 tctaggggtaaag-cactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaa 900 Query: 63 ctctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacga 120 || |||||| |||||||||| ||||||||||||||| | ||||| | |||| ||||| | Sbjct: 901 ctatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcgagacca 960 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||| |||| ||| |||||| ||||||||||||||| Sbjct: 961 tgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaa 1020 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||| || ||| ||||||||||| |||||||| | ||| |||||| |||||||||||| Sbjct: 1021 atgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaa 1080 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 | ||||||| ||||||||||||||||||||| |||||||||| || |||| || ||| || Sbjct: 1081 ggagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatat 1140 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||| ||||| ||| ||||||| ||||||||| | |||||| ||||||||| Sbjct: 1141 gaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcg 1195 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||| |||||| | ||||||| | || || | ||| || ||||| |||| |||||||| Sbjct: 1196 ttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtgagaatgt 1255 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 479 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| Sbjct: 1256 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggattcct 1314
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 394 bits (199), Expect = e-106 Identities = 209/211 (99%), Gaps = 1/211 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 775 catctaggggtaaag-cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 833 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 834 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 893 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 894 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 953 Query: 181 atgaccgctcagtgataaaggaggtgggggt 211 ||||||||||||||||||||||||| ||||| Sbjct: 954 atgaccgctcagtgataaaggaggtaggggt 984
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 389 bits (196), Expect = e-105 Identities = 410/479 (85%), Gaps = 8/479 (1%) Strand = Plus / Plus Query: 3 tctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 62 ||||||||||||| |||| ||||||||| || ||| |||||||||||||| |||||||| Sbjct: 842 tctaggggtaaag-cactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaa 900 Query: 63 ctctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacga 120 || |||||| |||||||||| ||||||||||||||| | ||||| | |||| ||||| | Sbjct: 901 ctatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcgagacca 960 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||| |||| ||| |||||| ||||||||||||||| Sbjct: 961 tgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaa 1020 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||| || ||| ||||||||||| |||||||| | ||| |||||| |||||||||||| Sbjct: 1021 atgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaa 1080 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 | |||||| ||||||||||||||||||||| |||||||||| || |||| || ||| || Sbjct: 1081 gaggccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatat 1140 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||| ||||| ||| ||||||| ||||||||| | |||||| ||||||||| Sbjct: 1141 gaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcg 1195 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||| |||||| | ||||||| | || || | ||| || ||||| |||| |||||||| Sbjct: 1196 ttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtgagaatgt 1255 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 479 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| Sbjct: 1256 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggattcct 1314
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 389 bits (196), Expect = e-105 Identities = 410/479 (85%), Gaps = 8/479 (1%) Strand = Plus / Plus Query: 3 tctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 62 ||||||||||||| |||| ||||||||| || ||| |||||||||||||| |||||||| Sbjct: 842 tctaggggtaaag-cactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaa 900 Query: 63 ctctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacga 120 || |||||| |||||||||| ||||||||||||||| | ||||| | |||| ||||| | Sbjct: 901 ctatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcgagacca 960 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||| |||| ||| |||||| ||||||||||||||| Sbjct: 961 tgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaa 1020 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||| || ||| ||||||||||| |||||||| | ||| |||||| | |||||||||| Sbjct: 1021 atgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagcttgcctagaa 1080 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 | ||||||| ||||||||||||||||||||| |||||||||| || |||| || ||| || Sbjct: 1081 gaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatat 1140 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||| ||||| ||| ||||||| ||||||||| | |||||| ||||||||| Sbjct: 1141 gaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcg 1195 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||| |||||| | ||||||| | || || | ||| || ||||| |||| |||||||| Sbjct: 1196 ttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtgagaatgt 1255 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 479 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| Sbjct: 1256 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggattcct 1314
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 389 bits (196), Expect = e-105 Identities = 410/479 (85%), Gaps = 8/479 (1%) Strand = Plus / Plus Query: 3 tctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 62 ||||||||||||| |||| ||||||||| || ||| |||||||||||||| |||||||| Sbjct: 842 tctaggggtaaag-cactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaa 900 Query: 63 ctctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacga 120 || |||||| |||||||||| ||||||||||||||| | ||||| | |||| ||||| | Sbjct: 901 ctatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcgagacca 960 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||| |||| ||| |||||| ||||||||||||||| Sbjct: 961 tgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaa 1020 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||| || ||| ||||||||||| |||||||| | ||| |||||| |||||||||||| Sbjct: 1021 atgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaa 1080 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 | ||||||| ||||||||||||||||||||| |||||||||| || |||| || ||| || Sbjct: 1081 gaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatat 1140 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||| ||||| ||| ||||||| ||||||||| | |||||| ||||||||| Sbjct: 1141 gaacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcg 1195 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||| |||||| | ||||||| | || || | ||| || ||||| || | |||||||| Sbjct: 1196 ttctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaggtgagaatgt 1255 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 479 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| Sbjct: 1256 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggattcct 1314
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 389 bits (196), Expect = e-105 Identities = 410/479 (85%), Gaps = 8/479 (1%) Strand = Plus / Plus Query: 3 tctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 62 ||||||||||||| |||| ||||||||| || ||| |||||||||||||| |||||||| Sbjct: 842 tctaggggtaaag-cactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaa 900 Query: 63 ctctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacga 120 || |||||| |||||||||| ||||||||||||||| | ||||| | |||| ||||| | Sbjct: 901 ctatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcgagacca 960 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||| |||| ||| |||||| ||||||||||||||| Sbjct: 961 tgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaa 1020 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 |||||| || ||| ||||||||||| |||||||| | ||| |||||| |||||||||||| Sbjct: 1021 atgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaa 1080 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 | ||||||| ||||||||||||||||||||| |||||||||| || |||| || ||| || Sbjct: 1081 gaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatat 1140 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcg 360 ||||||| || || ||| ||||||| ||||||||| | |||||| ||||||||| Sbjct: 1141 gaacgggaataggcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcg 1195 Query: 361 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 420 ||| |||||| | ||||||| | || || | ||| || ||||| |||| |||||||| Sbjct: 1196 ttctgccttataaggaagcacctgcccgagaagtggtggatgaagcagaagtgagaatgt 1255 Query: 421 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 479 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| Sbjct: 1256 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggattcct 1314
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 371 bits (187), Expect = 1e-99 Identities = 329/376 (87%), Gaps = 4/376 (1%) Strand = Plus / Plus Query: 109 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 168 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 952 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 1011 Query: 169 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 228 ||||||||||||||| ||||| |||| |||||| ||| | ||||| ||||| ||||||| Sbjct: 1012 taaggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagacaaccaggag 1071 Query: 229 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 288 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 1072 gtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctct 1131 Query: 289 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg---- 344 ||||| ||| ||| ||||| ||||||| |||||||||||||| |||||| ||| Sbjct: 1132 tgcgccgaaaatggacgggactaagcggcctgccgaagctgtgagatgtctctatggaga 1191 Query: 345 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 404 ||||||||||||||||||||| ||| | |||||| | ||| ||| | || |||||| Sbjct: 1192 tatcggtaggggagcgttccgctatagggtgaagcatcagcgtaagtagatgtggacgaa 1251 Query: 405 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 464 ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1252 gcggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaa 1311 Query: 465 aacccaaggtttcctc 480 |||| |||| |||||| Sbjct: 1312 aacctaagggttcctc 1327 Score = 115 bits (58), Expect = 1e-22 Identities = 71/74 (95%), Gaps = 1/74 (1%) Strand = Plus / Plus Query: 3 tctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 62 ||||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 864 tctaggggtaaag-cactgtttcggtgcgggctgcgagagcggtaccaaatcgatgcaaa 922 Query: 63 ctctgaatactaga 76 |||||||||||||| Sbjct: 923 ctctgaatactaga 936
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 371 bits (187), Expect = 1e-99 Identities = 329/376 (87%), Gaps = 4/376 (1%) Strand = Plus / Minus Query: 109 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 168 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 114710 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 114651 Query: 169 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 228 ||||||||||||||| ||||| |||| |||||| ||| | ||||| ||||| ||||||| Sbjct: 114650 taaggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagacaaccaggag 114591 Query: 229 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 288 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 114590 gtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctct 114531 Query: 289 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg---- 344 ||||| ||| ||| ||||| ||||||| |||||||||||||| |||||| ||| Sbjct: 114530 tgcgccgaaaatggacgggactaagcggcctgccgaagctgtgagatgtctctatggaga 114471 Query: 345 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 404 ||||||||||||||||||||| ||| | |||||| | ||| ||| | || |||||| Sbjct: 114470 tatcggtaggggagcgttccgctatagggtgaagcatcagcgtaagtagatgtggacgaa 114411 Query: 405 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 464 ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 114410 gcggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaa 114351 Query: 465 aacccaaggtttcctc 480 |||| |||| |||||| Sbjct: 114350 aacctaagggttcctc 114335 Score = 371 bits (187), Expect = 1e-99 Identities = 329/376 (87%), Gaps = 4/376 (1%) Strand = Plus / Plus Query: 109 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 168 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 87278 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 87337 Query: 169 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 228 ||||||||||||||| ||||| |||| |||||| ||| | ||||| ||||| ||||||| Sbjct: 87338 taaggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagacaaccaggag 87397 Query: 229 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 288 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 87398 gtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctct 87457 Query: 289 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg---- 344 ||||| ||| ||| ||||| ||||||| |||||||||||||| |||||| ||| Sbjct: 87458 tgcgccgaaaatggacgggactaagcggcctgccgaagctgtgagatgtctctatggaga 87517 Query: 345 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 404 ||||||||||||||||||||| ||| | |||||| | ||| ||| | || |||||| Sbjct: 87518 tatcggtaggggagcgttccgctatagggtgaagcatcagcgtaagtagatgtggacgaa 87577 Query: 405 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 464 ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 87578 gcggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaa 87637 Query: 465 aacccaaggtttcctc 480 |||| |||| |||||| Sbjct: 87638 aacctaagggttcctc 87653 Score = 115 bits (58), Expect = 1e-22 Identities = 71/74 (95%), Gaps = 1/74 (1%) Strand = Plus / Minus Query: 3 tctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 62 ||||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 114798 tctaggggtaaag-cactgtttcggtgcgggctgcgagagcggtaccaaatcgatgcaaa 114740 Query: 63 ctctgaatactaga 76 |||||||||||||| Sbjct: 114739 ctctgaatactaga 114726 Score = 115 bits (58), Expect = 1e-22 Identities = 71/74 (95%), Gaps = 1/74 (1%) Strand = Plus / Plus Query: 3 tctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 62 ||||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 87190 tctaggggtaaag-cactgtttcggtgcgggctgcgagagcggtaccaaatcgatgcaaa 87248 Query: 63 ctctgaatactaga 76 |||||||||||||| Sbjct: 87249 ctctgaatactaga 87262
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 361 bits (182), Expect = 1e-96 Identities = 189/190 (99%), Gaps = 1/190 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 660 catctaggggtaaag-cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 718 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 719 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 778 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 779 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 838 Query: 181 atgaccgctc 190 |||||||||| Sbjct: 839 atgaccgctc 848
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 359 bits (181), Expect = 5e-96 Identities = 196/201 (97%) Strand = Plus / Plus Query: 73 tagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 132 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 19152830 tagatatgacccaaaaataacaggggccaaggtcggccagtgagacgatgggggataagc 19152889 Query: 133 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 192 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 19152890 ttcatcgtcgagagggaaacaacccggatcaccagctaaggcccctaaatgaccgctcag 19152949 Query: 193 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 252 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 19152950 tgataaaggaggtgggggtgcaaagatagccaggaggtttgcctagaagcagccaccctt 19153009 Query: 253 taaagagtgcgtaatagctca 273 |||||||||||| ||| |||| Sbjct: 19153010 taaagagtgcgttatatctca 19153030
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 359 bits (181), Expect = 5e-96 Identities = 325/373 (87%) Strand = Plus / Plus Query: 108 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 167 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 3985 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 4044 Query: 168 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 227 |||||||||||||| | |||| |||| |||||||||| | ||||| |||||||||||| Sbjct: 4045 ttaaggcccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagccagga 4104 Query: 228 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 287 ||||||| |||||||||| | |||| |||||||||||||||||||||||||| ||||| | Sbjct: 4105 ggtttgcttagaagcagcaatccttgaaagagtgcgtaatagctcactgatcaagcgctc 4164 Query: 288 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 347 |||||| ||||||||||||| ||||||||| ||||||| ||||||||||| || | ||| Sbjct: 4165 ttgcgccgaagatgaacgggactaagcgatttgccgaaactgtgggatgtttaagtacat 4224 Query: 348 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 407 |||||||||||||||| || ||||| |||||| | | |||| | | || |||||||| Sbjct: 4225 cggtaggggagcgttctgctatagagtgaagcatcagtgaaaacagatgtggacgaagca 4284 Query: 408 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 467 |||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 4285 gaagtgagaatgtcggcttgagtaacgcaaacattggtgggaatccaatgccccgaaaac 4344 Query: 468 ccaaggtttcctc 480 | |||| |||||| Sbjct: 4345 ctaagggttcctc 4357 Score = 103 bits (52), Expect = 5e-19 Identities = 71/76 (93%), Gaps = 1/76 (1%) Strand = Plus / Plus Query: 5 taggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 64 ||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||||| Sbjct: 3901 taggggtaaag-cactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgcaaact 3959 Query: 65 ctgaatactagatatg 80 |||||||||| ||||| Sbjct: 3960 ctgaatactaaatatg 3975
>dbj|AP005127.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0062D12 Length = 155408 Score = 359 bits (181), Expect = 5e-96 Identities = 196/201 (97%) Strand = Plus / Plus Query: 73 tagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 132 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 76225 tagatatgacccaaaaataacaggggccaaggtcggccagtgagacgatgggggataagc 76284 Query: 133 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 192 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 76285 ttcatcgtcgagagggaaacaacccggatcaccagctaaggcccctaaatgaccgctcag 76344 Query: 193 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 252 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 76345 tgataaaggaggtgggggtgcaaagatagccaggaggtttgcctagaagcagccaccctt 76404 Query: 253 taaagagtgcgtaatagctca 273 |||||||||||| ||| |||| Sbjct: 76405 taaagagtgcgttatatctca 76425
>emb|AM084277.1| Porphyridium aerugineum chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene and ITS1, strain SAG 43.94 Length = 4290 Score = 357 bits (180), Expect = 2e-95 Identities = 324/372 (87%), Gaps = 5/372 (1%) Strand = Plus / Plus Query: 109 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 168 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 2505 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 2564 Query: 169 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 228 |||||||||||||| | ||| |||||||||||||||||| |||| ||||| ||||||| Sbjct: 2565 taaggcccctaaataattgctaagtgataaaggaggtgggaatgcatagacaaccaggag 2624 Query: 229 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 288 |||||| |||||||||| |||||||||||||||||||||||||||||| || || | | Sbjct: 2625 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtcaagtgatcc 2684 Query: 289 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 348 ||||| ||| ||||||||| |||||| || ||||||||||||||||| ||| ||| Sbjct: 2685 tgcgccgaaaatgaacgggactaagcaatttgccgaagctgtgggat-----aatttatc 2739 Query: 349 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 408 ||||||||||||||| || ||||| |||||| ||| ||||||| || |||||||| | Sbjct: 2740 ggtaggggagcgttctgcattagattgaagcattagcgtaagcgggtgtggacgaagcag 2799 Query: 409 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 468 ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 2800 aagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaaacc 2859 Query: 469 caaggtttcctc 480 ||||||||||| Sbjct: 2860 taaggtttcctc 2871 Score = 93.7 bits (47), Expect = 5e-16 Identities = 63/67 (94%), Gaps = 1/67 (1%) Strand = Plus / Plus Query: 7 ggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 66 ||||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||| Sbjct: 2425 ggggtaaag-cactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgcaaactct 2483 Query: 67 gaatact 73 ||||||| Sbjct: 2484 gaatact 2490
>dbj|AP002845.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0482C06 Length = 182779 Score = 355 bits (179), Expect = 8e-95 Identities = 206/215 (95%), Gaps = 5/215 (2%) Strand = Plus / Plus Query: 129 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 188 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 167952 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 168011 Query: 189 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 248 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 168012 tcagtgataaaggaggtgggggtgcaaagac-----ggaggtttgcctaaaagcagccac 168066 Query: 249 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 168067 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 168126 Query: 309 ctaagcgatctgccgaagctgtgggatgtcaaaat 343 |||||||||||||| |||||||||||||||||||| Sbjct: 168127 ctaagcgatctgccaaagctgtgggatgtcaaaat 168161
>dbj|AP002882.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0439B06 Length = 135991 Score = 355 bits (179), Expect = 8e-95 Identities = 206/215 (95%), Gaps = 5/215 (2%) Strand = Plus / Plus Query: 129 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 188 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 2356 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 2415 Query: 189 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 248 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 2416 tcagtgataaaggaggtgggggtgcaaagac-----ggaggtttgcctaaaagcagccac 2470 Query: 249 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2471 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 2530 Query: 309 ctaagcgatctgccgaagctgtgggatgtcaaaat 343 |||||||||||||| |||||||||||||||||||| Sbjct: 2531 ctaagcgatctgccaaagctgtgggatgtcaaaat 2565
>emb|X06235.1|MIOBRRNP Oenothera berteriana mitDNA with part of plastid rRNA operon Length = 2900 Score = 355 bits (179), Expect = 8e-95 Identities = 209/219 (95%) Strand = Plus / Plus Query: 262 cgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgc 321 |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| Sbjct: 755 cgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgc 814 Query: 322 cgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaa 381 |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 815 cgaagctgcgggatgtaaaaatgcatcggtaggggagcgttccgccttagagggaagcac 874 Query: 382 ccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacat 441 |||||| ||||||||| |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 875 ccgcgagagcgggggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacat 934 Query: 442 tggtgagaatccaatgccccgaaaacccaaggtttcctc 480 ||||||||||||||||||||||||||| |||| |||||| Sbjct: 935 tggtgagaatccaatgccccgaaaacctaagggttcctc 973
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 351 bits (177), Expect = 1e-93 Identities = 325/373 (87%), Gaps = 1/373 (0%) Strand = Plus / Plus Query: 108 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 167 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 951 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 1010 Query: 168 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 227 |||||||||||||| | |||| |||| |||||||||| | ||||| |||||||||||| Sbjct: 1011 ttaaggcccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagccagga 1070 Query: 228 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 287 ||||||| |||||||||| | |||| |||||||||||||||||||||||||| ||||| | Sbjct: 1071 ggtttgcttagaagcagcaatccttgaaagagtgcgtaatagctcactgatcaagcgctc 1130 Query: 288 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 347 |||||| ||||||||| ||| ||||||||| ||||||| ||||||||||| ||| ||| Sbjct: 1131 ttgcgccgaagatgaatgggactaagcgatttgccgaaactgtgggatgt-ttaatacat 1189 Query: 348 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 407 |||||||||||||||| || ||||| |||||| | | |||| | | || |||||||| Sbjct: 1190 cggtaggggagcgttctgctatagagtgaagcaccagtgaaaacagatgtggacgaagca 1249 Query: 408 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 467 |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1250 gaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaac 1309 Query: 468 ccaaggtttcctc 480 | |||| |||||| Sbjct: 1310 ctaagggttcctc 1322 Score = 103 bits (52), Expect = 5e-19 Identities = 71/76 (93%), Gaps = 1/76 (1%) Strand = Plus / Plus Query: 5 taggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 64 ||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||||| Sbjct: 867 taggggtaaag-cactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgcaaact 925 Query: 65 ctgaatactagatatg 80 |||||||||| ||||| Sbjct: 926 ctgaatactaaatatg 941
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 343 bits (173), Expect = 3e-91 Identities = 323/373 (86%) Strand = Plus / Plus Query: 108 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 167 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 951 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 1010 Query: 168 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 227 |||||||||||||| | |||| |||| |||||||||| | ||||| |||||||||||| Sbjct: 1011 ttaaggcccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagccagga 1070 Query: 228 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 287 ||||||| |||||||||| | |||| |||||||||||||||||||||||||| ||||| | Sbjct: 1071 ggtttgcttagaagcagcaatccttgaaagagtgcgtaatagctcactgatcaagcgctc 1130 Query: 288 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 347 |||||| ||||||||| ||| ||||||||| ||||||| ||||||||||| || | ||| Sbjct: 1131 ttgcgccgaagatgaatgggactaagcgatttgccgaaactgtgggatgtttaagtacat 1190 Query: 348 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 407 |||||||||||||||| || |||| |||||| | | |||| | | || |||||||| Sbjct: 1191 cggtaggggagcgttctgctatagattgaagcatcagtgaaaacagatgtggacgaagca 1250 Query: 408 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 467 |||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 1251 gaagtgagaatgtcggcttgagtaacgcaaacattggtgggaatccaatgccccgaaaac 1310 Query: 468 ccaaggtttcctc 480 | |||| |||||| Sbjct: 1311 ctaagggttcctc 1323 Score = 103 bits (52), Expect = 5e-19 Identities = 71/76 (93%), Gaps = 1/76 (1%) Strand = Plus / Plus Query: 5 taggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 64 ||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||||| Sbjct: 867 taggggtaaag-cactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgcaaact 925 Query: 65 ctgaatactagatatg 80 |||||||||| ||||| Sbjct: 926 ctgaatactaaatatg 941
>gb|AC157348.25| Medicago truncatula clone mth2-133e20, complete sequence Length = 115475 Score = 333 bits (168), Expect = 3e-88 Identities = 192/200 (96%) Strand = Plus / Minus Query: 136 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 195 |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 115474 atcgtcgagagggaaacagcccagatcaccagctaaggcccctaaatgatcgctcagtga 115415 Query: 196 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 255 |||||||||| || ||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 115414 taaaggaggtaggagtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 115355 Query: 256 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 315 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 115354 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 115295 Query: 316 atctgccgaagctgtgggat 335 |||||||||||||||||||| Sbjct: 115294 atctgccgaagctgtgggat 115275
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 333 bits (168), Expect = 3e-88 Identities = 175/176 (99%), Gaps = 1/176 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 868 catctaggggtaaag-cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 926 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 927 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 986 Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 176 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 987 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 1042
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 313 bits (158), Expect = 3e-82 Identities = 206/222 (92%) Strand = Plus / Plus Query: 110 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 169 ||||||||| ||||||||||||| ||| ||| ||||||||||||||| ||||||||||| Sbjct: 1358 cagtgagacagtgggggataagctccattgtcaagagggaaacagcccagatcaccagct 1417 Query: 170 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 229 ||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||| Sbjct: 1418 aaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagccaggagg 1477 Query: 230 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 289 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 1478 tttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctctt 1537 Query: 290 gcgctgaagatgaacggggctaagcgatctgccgaagctgtg 331 |||| ||| ||||||||| ||||||| ||||||||||||||| Sbjct: 1538 gcgccgaaaatgaacgggactaagcggtctgccgaagctgtg 1579 Score = 139 bits (70), Expect = 9e-30 Identities = 118/134 (88%) Strand = Plus / Plus Query: 346 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 405 ||||||||||||||||||||| ||||| |||||| ||| |||| || || ||||| | Sbjct: 1601 atcggtaggggagcgttccgcgttagatcgaagcattagcgtaagcaggtgtggacgagg 1660 Query: 406 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 465 |||||| |||||||||||||||||||||| ||||||||||||||||||||||||| |||| Sbjct: 1661 cggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccctgaaa 1720 Query: 466 acccaaggtttcct 479 ||| |||| ||||| Sbjct: 1721 acctaaggattcct 1734 Score = 113 bits (57), Expect = 5e-22 Identities = 73/77 (94%), Gaps = 1/77 (1%) Strand = Plus / Plus Query: 5 taggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 64 ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1270 taggggtaaag-cactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaact 1328 Query: 65 ctgaatactagatatga 81 |||||||||||| |||| Sbjct: 1329 ctgaatactagacatga 1345
>gb|L42861.1|KLBCPRGOL Klebsormidium flaccidum large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2604 Score = 307 bits (155), Expect = 2e-80 Identities = 319/371 (85%), Gaps = 2/371 (0%) Strand = Plus / Plus Query: 109 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 168 |||||||||||| |||||||||||||| | |||||||||| |||||||| || || | || Sbjct: 942 ccagtgagacgaagggggataagcttctttgtcgagaggggaacagcccagaccatcggc 1001 Query: 169 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 228 ||||||||| ||||| ||||| |||| |||||| ||||| |||| ||||||||||||| Sbjct: 1002 taaggcccccaaatggccgctaagtggcaaaggatgtgggagtgctcagacagccaggag 1061 Query: 229 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 288 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 1062 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcaagcgctcc 1121 Query: 289 tgcgctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgcat 347 |||| |||||||||||| || ||||| ||||||| || |||||||| |||| |||| Sbjct: 1122 cgcgccaaagatgaacgggactcaagcggcctgccgaggccatgggatgt-aaaaagcat 1180 Query: 348 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 407 ||||||||||||||||||| || ||||| |||| ||| || || ||||| ||| Sbjct: 1181 cggtaggggagcgttccgcggcaggttgaagcgtaagcgagagcaggcgtggacgaggcg 1240 Query: 408 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 467 |||| |||||||||||||||||||||| ||||| ||||||||||||| |||||||||||| Sbjct: 1241 gaagtgagaatgtcggcttgagtaacgcaaacactggtgagaatccagtgccccgaaaac 1300 Query: 468 ccaaggtttcc 478 |||||| |||| Sbjct: 1301 ccaagggttcc 1311 Score = 111 bits (56), Expect = 2e-21 Identities = 66/68 (97%), Gaps = 1/68 (1%) Strand = Plus / Plus Query: 6 aggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 65 |||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 857 aggggtaaag-cactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactc 915 Query: 66 tgaatact 73 |||||||| Sbjct: 916 tgaatact 923
>gb|AF393599.1| Klebsormidium subtilissimum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2901 Score = 307 bits (155), Expect = 2e-80 Identities = 319/371 (85%), Gaps = 2/371 (0%) Strand = Plus / Plus Query: 109 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 168 |||||||||||| |||||||||||||| | |||||||||| |||||||| || || | || Sbjct: 955 ccagtgagacgaagggggataagcttctttgtcgagaggggaacagcccagaccatcggc 1014 Query: 169 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 228 ||||||||| ||||| ||||| |||| |||||| ||||| |||| ||||||||||||| Sbjct: 1015 taaggcccccaaatggccgctaagtggcaaaggatgtgggagtgctcagacagccaggag 1074 Query: 229 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 288 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 1075 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcaagcgctcc 1134 Query: 289 tgcgctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgcat 347 |||| |||||||||||| || ||||| ||||||| || |||||||| |||| |||| Sbjct: 1135 cgcgccaaagatgaacgggactcaagcggcctgccgaggccatgggatgt-aaaaagcat 1193 Query: 348 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 407 ||||||||||||||||||| || ||||| |||| ||| || || ||||| ||| Sbjct: 1194 cggtaggggagcgttccgcggcaggttgaagcgtaagcgagagcaggcgtggacgaggcg 1253 Query: 408 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 467 |||| |||||||||||||||||||||| ||||| ||||||||||||| |||||||||||| Sbjct: 1254 gaagtgagaatgtcggcttgagtaacgcaaacactggtgagaatccagtgccccgaaaac 1313 Query: 468 ccaaggtttcc 478 |||||| |||| Sbjct: 1314 ccaagggttcc 1324 Score = 111 bits (56), Expect = 2e-21 Identities = 66/68 (97%), Gaps = 1/68 (1%) Strand = Plus / Plus Query: 6 aggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 65 |||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 870 aggggtaaag-cactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactc 928 Query: 66 tgaatact 73 |||||||| Sbjct: 929 tgaatact 936
>gb|AF393598.1| Klebsormidium flaccidum small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and 5S ribosomal RNA (rrf) gene, partial sequence; chloroplast genes for chloroplast products Length = 7627 Score = 307 bits (155), Expect = 2e-80 Identities = 319/371 (85%), Gaps = 2/371 (0%) Strand = Plus / Plus Query: 109 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 168 |||||||||||| |||||||||||||| | |||||||||| |||||||| || || | || Sbjct: 5529 ccagtgagacgaagggggataagcttctttgtcgagaggggaacagcccagaccatcggc 5588 Query: 169 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 228 ||||||||| ||||| ||||| |||| |||||| ||||| |||| ||||||||||||| Sbjct: 5589 taaggcccccaaatggccgctaagtggcaaaggatgtgggagtgctcagacagccaggag 5648 Query: 229 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 288 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 5649 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcaagcgctcc 5708 Query: 289 tgcgctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgcat 347 |||| |||||||||||| || ||||| ||||||| || |||||||| |||| |||| Sbjct: 5709 cgcgccaaagatgaacgggactcaagcggcctgccgaggccatgggatgt-aaaaagcat 5767 Query: 348 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 407 ||||||||||||||||||| || ||||| |||| ||| || || ||||| ||| Sbjct: 5768 cggtaggggagcgttccgcggcaggttgaagcgtaagcgagagcaggcgtggacgaggcg 5827 Query: 408 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 467 |||| |||||||||||||||||||||| ||||| ||||||||||||| |||||||||||| Sbjct: 5828 gaagtgagaatgtcggcttgagtaacgcaaacactggtgagaatccagtgccccgaaaac 5887 Query: 468 ccaaggtttcc 478 |||||| |||| Sbjct: 5888 ccaagggttcc 5898 Score = 111 bits (56), Expect = 2e-21 Identities = 66/68 (97%), Gaps = 1/68 (1%) Strand = Plus / Plus Query: 6 aggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 65 |||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 5444 aggggtaaag-cactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactc 5502 Query: 66 tgaatact 73 |||||||| Sbjct: 5503 tgaatact 5510
>dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome Length = 191952 Score = 303 bits (153), Expect = 3e-79 Identities = 318/372 (85%), Gaps = 2/372 (0%) Strand = Plus / Plus Query: 109 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 168 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 189872 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 189931 Query: 169 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 228 |||||||||||||| | ||| |||| |||||||||||| |||| ||||| ||||||| Sbjct: 189932 taaggcccctaaataattgctaagtggcaaaggaggtgggaatgcatagacaaccaggag 189991 Query: 229 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 288 |||||| |||||||||| |||||||||||||||||||||||||||||| || || | | Sbjct: 189992 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtcaagtgatcc 190051 Query: 289 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 348 ||||| ||| ||||||||| ||||| || ||||||||||||||||||| || |||| Sbjct: 190052 tgcgccgaaaatgaacgggactaagtaatttgccgaagctgtgggatgt--ttatacatc 190109 Query: 349 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 408 ||||||||||||||| | |||| |||||| ||||||||||| || ||| || | | Sbjct: 190110 ggtaggggagcgttctgtattagtttgaagcattagcgaaagcgggtgtggacaaaacag 190169 Query: 409 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 468 ||| |||||||||||||| |||| |||||||||||||||||||||||||||||||||||| Sbjct: 190170 aagtgagaatgtcggcttaagtagcgaaaacattggtgagaatccaatgccccgaaaacc 190229 Query: 469 caaggtttcctc 480 |||| |||||| Sbjct: 190230 taaggattcctc 190241 Score = 303 bits (153), Expect = 3e-79 Identities = 318/372 (85%), Gaps = 2/372 (0%) Strand = Plus / Plus Query: 109 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 168 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 151299 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 151358 Query: 169 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 228 |||||||||||||| | ||| |||| |||||||||||| |||| ||||| ||||||| Sbjct: 151359 taaggcccctaaataattgctaagtggcaaaggaggtgggaatgcatagacaaccaggag 151418 Query: 229 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 288 |||||| |||||||||| |||||||||||||||||||||||||||||| || || | | Sbjct: 151419 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtcaagtgatcc 151478 Query: 289 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 348 ||||| ||| ||||||||| ||||| || ||||||||||||||||||| || |||| Sbjct: 151479 tgcgccgaaaatgaacgggactaagtaatttgccgaagctgtgggatgt--ttatacatc 151536 Query: 349 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 408 ||||||||||||||| | |||| |||||| ||||||||||| || ||| || | | Sbjct: 151537 ggtaggggagcgttctgtattagtttgaagcattagcgaaagcgggtgtggacaaaacag 151596 Query: 409 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 468 ||| |||||||||||||| |||| |||||||||||||||||||||||||||||||||||| Sbjct: 151597 aagtgagaatgtcggcttaagtagcgaaaacattggtgagaatccaatgccccgaaaacc 151656 Query: 469 caaggtttcctc 480 |||| |||||| Sbjct: 151657 taaggattcctc 151668 Score = 107 bits (54), Expect = 3e-20 Identities = 64/66 (96%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 7 ggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 66 ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 189792 ggggtaaag-cactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactct 189850 Query: 67 gaatac 72 |||||| Sbjct: 189851 gaatac 189856 Score = 107 bits (54), Expect = 3e-20 Identities = 64/66 (96%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 7 ggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 66 ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 151219 ggggtaaag-cactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactct 151277 Query: 67 gaatac 72 |||||| Sbjct: 151278 gaatac 151283
>gb|L42845.1|FRICPRGOL Friedmannia israeliensis large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2704 Score = 291 bits (147), Expect = 1e-75 Identities = 207/227 (91%) Strand = Plus / Plus Query: 109 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 168 ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 966 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcaccagc 1025 Query: 169 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 228 ||||||||||||||||||||| |||| ||||||||||| | ||| | ||| ||||||| Sbjct: 1026 taaggcccctaaatgaccgctaagtggtaaaggaggtgagaatgctgaaacaaccaggag 1085 Query: 229 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 288 |||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| || Sbjct: 1086 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtggagcgttct 1145 Query: 289 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 335 ||||| ||| ||||||||| ||||||| ||||||||||||||||||| Sbjct: 1146 tgcgccgaaaatgaacgggactaagcggtctgccgaagctgtgggat 1192 Score = 129 bits (65), Expect = 9e-27 Identities = 74/77 (96%) Strand = Plus / Plus Query: 403 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 462 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1299 aagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 1358 Query: 463 aaaacccaaggtttcct 479 |||||| |||| ||||| Sbjct: 1359 aaaacctaagggttcct 1375 Score = 91.7 bits (46), Expect = 2e-15 Identities = 68/74 (91%), Gaps = 1/74 (1%) Strand = Plus / Plus Query: 3 tctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 62 ||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||| Sbjct: 878 tctaggggtaaag-cactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaa 936 Query: 63 ctctgaatactaga 76 || |||||||||| Sbjct: 937 ctaagaatactaga 950 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 346 atcggtaggggagcgttccgc 366 ||||||||||||||||||||| Sbjct: 1242 atcggtaggggagcgttccgc 1262
>gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome Length = 191028 Score = 283 bits (143), Expect = 3e-73 Identities = 314/370 (84%), Gaps = 2/370 (0%) Strand = Plus / Plus Query: 111 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 170 |||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||||| Sbjct: 188951 agtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagcta 189010 Query: 171 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 230 ||||||| |||| | || |||| |||||||||||| |||| ||||| ||||||||| Sbjct: 189011 aggccccaaaataattactaagtggcaaaggaggtgggaatgcatagacaaccaggaggt 189070 Query: 231 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 290 |||| |||||||||| | |||||||||||||||||||||||||||| || || | | || Sbjct: 189071 ttgcttagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagtgatcctg 189130 Query: 291 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 350 ||| ||| ||||||||| ||||| || ||||||||||||||||||| || |||||| Sbjct: 189131 cgccgaaaatgaacgggactaagtaatttgccgaagctgtgggatgt--ttatacatcgg 189188 Query: 351 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 410 ||||||||||||| | |||| |||||| ||||||||||| || ||| || | ||| Sbjct: 189189 taggggagcgttctgtattaggttgaagcattagcgaaagcgggtgtggacaaaacagaa 189248 Query: 411 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccca 470 |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| | Sbjct: 189249 gcgagaatgtcggcttaagtagcgaaaacattggtgagaatccaatgccccgaaaaccta 189308 Query: 471 aggtttcctc 480 ||| |||||| Sbjct: 189309 aggattcctc 189318 Score = 283 bits (143), Expect = 3e-73 Identities = 314/370 (84%), Gaps = 2/370 (0%) Strand = Plus / Plus Query: 111 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 170 |||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||||| Sbjct: 150508 agtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagcta 150567 Query: 171 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 230 ||||||| |||| | || |||| |||||||||||| |||| ||||| ||||||||| Sbjct: 150568 aggccccaaaataattactaagtggcaaaggaggtgggaatgcatagacaaccaggaggt 150627 Query: 231 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 290 |||| |||||||||| | |||||||||||||||||||||||||||| || || | | || Sbjct: 150628 ttgcttagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagtgatcctg 150687 Query: 291 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 350 ||| ||| ||||||||| ||||| || ||||||||||||||||||| || |||||| Sbjct: 150688 cgccgaaaatgaacgggactaagtaatttgccgaagctgtgggatgt--ttatacatcgg 150745 Query: 351 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 410 ||||||||||||| | |||| |||||| ||||||||||| || ||| || | ||| Sbjct: 150746 taggggagcgttctgtattaggttgaagcattagcgaaagcgggtgtggacaaaacagaa 150805 Query: 411 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccca 470 |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| | Sbjct: 150806 gcgagaatgtcggcttaagtagcgaaaacattggtgagaatccaatgccccgaaaaccta 150865 Query: 471 aggtttcctc 480 ||| |||||| Sbjct: 150866 aggattcctc 150875 Score = 115 bits (58), Expect = 1e-22 Identities = 68/70 (97%), Gaps = 1/70 (1%) Strand = Plus / Plus Query: 5 taggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 64 ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 188867 taggggtaaag-cactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaact 188925 Query: 65 ctgaatacta 74 |||||||||| Sbjct: 188926 ctgaatacta 188935 Score = 115 bits (58), Expect = 1e-22 Identities = 68/70 (97%), Gaps = 1/70 (1%) Strand = Plus / Plus Query: 5 taggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 64 ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 150424 taggggtaaag-cactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaact 150482 Query: 65 ctgaatacta 74 |||||||||| Sbjct: 150483 ctgaatacta 150492
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 276 bits (139), Expect = 6e-71 Identities = 232/262 (88%), Gaps = 2/262 (0%) Strand = Plus / Plus Query: 105 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 164 |||||||||||||| ||||||||||||||||| ||| ||||||||||||||| |||||| Sbjct: 948 tcggccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcac 1007 Query: 165 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 224 ||||||||||||| |||| |||||||||||||||||| ||| | |||| ||||| ||| Sbjct: 1008 cagctaaggccccagaatggccgctcagtgataaaggatgtgagagtgcccagacaacca 1067 Query: 225 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 284 |||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||| Sbjct: 1068 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcg 1127 Query: 285 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 344 | ||||||| ||| ||||||||| ||||||| |||||||||||||| |||| || Sbjct: 1128 ctcttgcgccgaaaatgaacgggactaagcggcctgccgaagctgtgagatggtgaa--t 1185 Query: 345 catcggtaggggagcgttccgc 366 |||||||||||||||||||||| Sbjct: 1186 catcggtaggggagcgttccgc 1207 Score = 113 bits (57), Expect = 5e-22 Identities = 75/81 (92%) Strand = Plus / Plus Query: 399 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 458 ||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1240 gacgaggcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1299 Query: 459 cccgaaaacccaaggtttcct 479 ||||||||| |||| ||||| Sbjct: 1300 tccgaaaacctaagggttcct 1320 Score = 85.7 bits (43), Expect = 1e-13 Identities = 65/71 (91%), Gaps = 1/71 (1%) Strand = Plus / Plus Query: 3 tctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 62 ||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||| Sbjct: 864 tctaggggtaaag-cactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaa 922 Query: 63 ctctgaatact 73 || ||||||| Sbjct: 923 ctaagaatact 933
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 272 bits (137), Expect = 1e-69 Identities = 203/225 (90%) Strand = Plus / Plus Query: 108 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 167 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 569 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 628 Query: 168 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 227 |||||| ||| ||||| ||||||||||| ||||||||||| ||||| ||||| |||||| Sbjct: 629 ctaaggtccccaaatggtcgctcagtgattaaggaggtgggagtgcacagacaaccagga 688 Query: 228 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 287 |||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 689 ggtttgcctagaagcagcaatccttgaaagagtgcgtaatagctcactggtcaagcgctc 748 Query: 288 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 332 ||||| ||| |||||||||||||||||| ||||||||||||||| Sbjct: 749 ctgcgccgaaaatgaacggggctaagcgacctgccgaagctgtgg 793 Score = 83.8 bits (42), Expect = 5e-13 Identities = 61/66 (92%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 7 ggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 66 ||||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 490 ggggtaaag-cactgtttcggtgcgggctgcctcagcggtaccaaatcgagacaaactct 548 Query: 67 gaatac 72 |||||| Sbjct: 549 gaatac 554 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 408 gaagcgagaatgtcggcttgagtaacgaaaa 438 |||| ||||||||||||||||||| |||||| Sbjct: 873 gaagtgagaatgtcggcttgagtagcgaaaa 903
>gb|AY741371.1| Emiliania huxleyi strain CCMP 373 chloroplast, complete genome Length = 105309 Score = 268 bits (135), Expect = 2e-68 Identities = 312/370 (84%), Gaps = 2/370 (0%) Strand = Plus / Minus Query: 111 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 170 |||||||| || ||||||||||||| ||| ||||||||||||||| ||| ||||| || Sbjct: 18092 agtgagacattgagggataagcttcaatgtcaagagggaaacagcccagattaccagtta 18033 Query: 171 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 230 |||||||||||| | || |||||||||||||||||| ||||| ||||| |||||||| Sbjct: 18032 aggcccctaaataattactaagtgataaaggaggtgggagtgcatagacaatcaggaggt 17973 Query: 231 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 290 ||||||||||||||| | |||||||||||||||||||||||||||| ||||| || | || Sbjct: 17972 ttgcctagaagcagcaatcctttaaagagtgcgtaatagctcactgttcgagtgctcctg 17913 Query: 291 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 350 ||| ||| ||||| ||| ||||| || |||||||||||| ||||| |||| |||||| Sbjct: 17912 cgccgaaaatgaatgggactaagtaatttgccgaagctgtaagatgttaaaa--catcgg 17855 Query: 351 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 410 ||||||||||||| | |||| ||||| ||| ||||||| || ||| | | ||| Sbjct: 17854 taggggagcgttctacattagtttgaagcgttagcggaagcgggcgtggacaaggtagaa 17795 Query: 411 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccca 470 | |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 17794 gtgagaatgttagcttgagtagcgaaaacattggtgagaatccaatgccccgaaaaccca 17735 Query: 471 aggtttcctc 480 ||| |||||| Sbjct: 17734 agggttcctc 17725 Score = 268 bits (135), Expect = 2e-68 Identities = 312/370 (84%), Gaps = 2/370 (0%) Strand = Plus / Plus Query: 111 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 170 |||||||| || ||||||||||||| ||| ||||||||||||||| ||| ||||| || Sbjct: 2774 agtgagacattgagggataagcttcaatgtcaagagggaaacagcccagattaccagtta 2833 Query: 171 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 230 |||||||||||| | || |||||||||||||||||| ||||| ||||| |||||||| Sbjct: 2834 aggcccctaaataattactaagtgataaaggaggtgggagtgcatagacaatcaggaggt 2893 Query: 231 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 290 ||||||||||||||| | |||||||||||||||||||||||||||| ||||| || | || Sbjct: 2894 ttgcctagaagcagcaatcctttaaagagtgcgtaatagctcactgttcgagtgctcctg 2953 Query: 291 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 350 ||| ||| ||||| ||| ||||| || |||||||||||| ||||| |||| |||||| Sbjct: 2954 cgccgaaaatgaatgggactaagtaatttgccgaagctgtaagatgttaaaa--catcgg 3011 Query: 351 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 410 ||||||||||||| | |||| ||||| ||| ||||||| || ||| | | ||| Sbjct: 3012 taggggagcgttctacattagtttgaagcgttagcggaagcgggcgtggacaaggtagaa 3071 Query: 411 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccca 470 | |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 3072 gtgagaatgttagcttgagtagcgaaaacattggtgagaatccaatgccccgaaaaccca 3131 Query: 471 aggtttcctc 480 ||| |||||| Sbjct: 3132 agggttcctc 3141 Score = 99.6 bits (50), Expect = 8e-18 Identities = 65/70 (92%) Strand = Plus / Minus Query: 5 taggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 64 ||||||||||| ||||||| ||||||||||||| ||||||||||||||| ||||||||| Sbjct: 18178 taggggtaaagctactgttttggtgcgggctgcgagagcggtaccaaatcaaggcaaact 18119 Query: 65 ctgaatacta 74 |||||||||| Sbjct: 18118 ctgaatacta 18109 Score = 99.6 bits (50), Expect = 8e-18 Identities = 65/70 (92%) Strand = Plus / Plus Query: 5 taggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 64 ||||||||||| ||||||| ||||||||||||| ||||||||||||||| ||||||||| Sbjct: 2688 taggggtaaagctactgttttggtgcgggctgcgagagcggtaccaaatcaaggcaaact 2747 Query: 65 ctgaatacta 74 |||||||||| Sbjct: 2748 ctgaatacta 2757
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 268 bits (135), Expect = 2e-68 Identities = 204/227 (89%) Strand = Plus / Plus Query: 109 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 168 ||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 1103 ccagtgagacggtgggggataagcttcatcgtcgaaagggaaacagcccagatcaccagc 1162 Query: 169 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 228 |||||||||| |||| ||||| |||| ||||||||||| | |||| | ||| ||||||| Sbjct: 1163 taaggcccctcaatggccgctaagtggtaaaggaggtgagaatgcagaaacaaccaggag 1222 Query: 229 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 288 |||||| |||||||||| |||||||||||||||||||||||||||||| | ||||| || Sbjct: 1223 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtggagcgttct 1282 Query: 289 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 335 ||||| ||| ||||||||| ||||||| ||||||||||||||||||| Sbjct: 1283 tgcgccgaaaatgaacgggactaagcggtctgccgaagctgtgggat 1329 Score = 157 bits (79), Expect = 4e-35 Identities = 121/135 (89%) Strand = Plus / Plus Query: 346 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 405 ||||||||||||||||||||| ||| | |||||| | |||||| || || ||||||| Sbjct: 1410 atcggtaggggagcgttccgctctagggtgaagcatcaacgaaagtaggtgtggacgaag 1469 Query: 406 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 465 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1470 cggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 1529 Query: 466 acccaaggtttcctc 480 ||| |||| |||||| Sbjct: 1530 acctaaggattcctc 1544 Score = 93.7 bits (47), Expect = 5e-16 Identities = 69/75 (92%), Gaps = 1/75 (1%) Strand = Plus / Plus Query: 3 tctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 62 ||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||| Sbjct: 1015 tctaggggtaaag-cactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaa 1073 Query: 63 ctctgaatactagat 77 || ||||||||||| Sbjct: 1074 ctaagaatactagat 1088
>gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribosomal RNA gene, partial sequence; chloroplast Length = 2661 Score = 268 bits (135), Expect = 2e-68 Identities = 201/223 (90%) Strand = Plus / Plus Query: 109 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 168 ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 960 ccagtgagacgatgggggataagcttcatcgtcaagagggaaacagcccagatcaccagc 1019 Query: 169 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 228 ||||||||||||||| ||||| |||||||||||||||| | ||| | ||| ||||||| Sbjct: 1020 taaggcccctaaatggccgctaagtgataaaggaggtgagaatgctgaaacaaccaggag 1079 Query: 229 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 288 |||||| ||||||||||||||||| ||||||||||||||||||||||| | ||||| || Sbjct: 1080 gtttgcttagaagcagccacccttaaaagagtgcgtaatagctcactggtggagcgttct 1139 Query: 289 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 331 ||||| ||| ||||||||| ||||||| |||||||||||||| Sbjct: 1140 tgcgccgaaaatgaacgggactaagcggcctgccgaagctgtg 1182 Score = 131 bits (66), Expect = 2e-27 Identities = 78/82 (95%) Strand = Plus / Plus Query: 399 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 458 ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1268 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1327 Query: 459 cccgaaaacccaaggtttcctc 480 |||||||||| |||| |||||| Sbjct: 1328 cccgaaaacctaagggttcctc 1349 Score = 91.7 bits (46), Expect = 2e-15 Identities = 68/74 (91%), Gaps = 1/74 (1%) Strand = Plus / Plus Query: 2 atctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 61 |||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||| Sbjct: 870 atctaggggtaaag-cactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaa 928 Query: 62 actctgaatactag 75 ||| ||||||||| Sbjct: 929 actaagaatactag 942 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 346 atcggtaggggagcgttccgc 366 ||||||||||||||||||||| Sbjct: 1215 atcggtaggggagcgttccgc 1235
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 262 bits (132), Expect = 9e-67 Identities = 201/224 (89%) Strand = Plus / Plus Query: 108 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 167 |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||| Sbjct: 944 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccat 1003 Query: 168 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 227 |||||||||| ||||||||||| |||| ||||||||| | ||||||||||| |||||| Sbjct: 1004 ctaaggccccaaaatgaccgctaagtggcaaaggaggtaagagtgcaaagacaaccagga 1063 Query: 228 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 287 ||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 1064 ggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctc 1123 Query: 288 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 331 | |||| ||| | ||||||| ||||||| |||||||||| |||| Sbjct: 1124 tcgcgccgaaaacgaacgggactaagcggtctgccgaagttgtg 1167 Score = 153 bits (77), Expect = 6e-34 Identities = 119/133 (89%) Strand = Plus / Plus Query: 348 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 407 ||||||||||||||||||| ||| | |||||| | |||||||| || || ||||||||| Sbjct: 1192 cggtaggggagcgttccgctctagggtgaagcatcagcgaaagcaggtgtggacgaagcg 1251 Query: 408 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 467 |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 1252 gaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaacc 1311 Query: 468 ccaaggtttcctc 480 | |||| |||||| Sbjct: 1312 ctaagggttcctc 1324 Score = 89.7 bits (45), Expect = 8e-15 Identities = 70/77 (90%), Gaps = 1/77 (1%) Strand = Plus / Plus Query: 2 atctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 61 |||||||||||||| |||||| ||||||||||||||| ||||||||||||||| ||| Sbjct: 859 atctaggggtaaag-cactgtatcggtgcgggctgcgaaagcggtaccaaatcgtaacaa 917 Query: 62 actctgaatactagata 78 ||||||||||||||||| Sbjct: 918 actctgaatactagata 934
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 252 bits (127), Expect = 9e-64 Identities = 329/395 (83%), Gaps = 6/395 (1%) Strand = Plus / Plus Query: 85 aaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgag 144 ||||||||||||| | | ||| | |||||||||| | ||||||||||||||||||||||| Sbjct: 944 aaaaataacagggataagggtggaccagtgagaccacgggggataagcttcatcgtcgag 1003 Query: 145 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 204 |||| |||| || |||||| ||||||| |||||||||||||||| ||| |||||||||| Sbjct: 1004 aggggaacattccagatcactagctaagccccctaaatgaccgctaagttataaaggagg 1063 Query: 205 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 264 | ||||||| ||||| |||||||||||||||||||| ||||||||||||||| |||| | Sbjct: 1064 t-agggtgcatagacatccaggaggtttgcctagaagaagccaccctttaaagcgtgcat 1122 Query: 265 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 324 ||||||| ||||| | || ||||| | ||| ||||||| | |||| |||| | ||| Sbjct: 1123 aatagctaactgacaaacagctcttgcaccgaaaatgaacgagaataagagatccgtcga 1182 Query: 325 agctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccg 384 ||||||||||||| |||||||||||||||||||| ||||| ||||||||| | | Sbjct: 1183 agctgtgggatgt-----agcatcggtaggggagcgttcttccttatagggaagcacctg 1237 Query: 385 cgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattgg 444 | ||| | || || ||||| |||| ||||||||||||||||||||| ||||||||| Sbjct: 1238 cacgagcagttgtggatgaagcagaagtgagaatgtcggcttgagtaacacaaacattgg 1297 Query: 445 tgagaatccaatgccccgaaaacccaaggtttcct 479 ||||||||||| |||| |||||| |||| ||||| Sbjct: 1298 cgagaatccaattccccaaaaacctaagggttcct 1332 Score = 75.8 bits (38), Expect = 1e-10 Identities = 72/82 (87%), Gaps = 1/82 (1%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| || ||||| |||||||| || |||||||||||||| |||||| Sbjct: 852 catctaggggtaaag-cattgttttggtgcgggtcacgagagcggtaccaaattgaggca 910 Query: 61 aactctgaatactagatatgac 82 ||| ||||||||||||||||| Sbjct: 911 gactatgaatactagatatgac 932
>gb|L42862.1|PNFCPRGOL Pycnococcus sp. CCMP 1203 large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2664 Score = 252 bits (127), Expect = 9e-64 Identities = 227/259 (87%), Gaps = 1/259 (0%) Strand = Plus / Plus Query: 108 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 167 ||||||||||| ||||||||||||| ||| ||||||||||||||||||| || || | | Sbjct: 954 gccagtgagactgtgggggataagctccattgtcgagagggaaacagcccagaccatcgg 1013 Query: 168 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 227 ||||||||||||||||| || |||||||||||||||| | |||| ||||| |||||| Sbjct: 1014 ctaaggcccctaaatgattactaagtgataaaggaggtgagagtgcccagacaaccagga 1073 Query: 228 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 287 ||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 1074 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctc 1133 Query: 288 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg-ca 346 |||||| ||| ||||||||| ||||| |||||||||||||||||||| ||| || | Sbjct: 1134 ttgcgccgaaaatgaacgggactaagtaatctgccgaagctgtgggataacaatttgtta 1193 Query: 347 tcggtaggggagcgttccg 365 ||||||||||||||||||| Sbjct: 1194 tcggtaggggagcgttccg 1212 Score = 83.8 bits (42), Expect = 5e-13 Identities = 67/74 (90%), Gaps = 1/74 (1%) Strand = Plus / Plus Query: 3 tctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 62 |||||||||| || |||||| ||||||||||||||| |||||||||||||||| ||||| Sbjct: 869 tctaggggtagag-cactgtctcggtgcgggctgcgagagcggtaccaaatcgtagcaaa 927 Query: 63 ctctgaatactaga 76 ||| |||||||||| Sbjct: 928 ctccgaatactaga 941 Score = 79.8 bits (40), Expect = 8e-12 Identities = 68/76 (89%), Gaps = 1/76 (1%) Strand = Plus / Plus Query: 406 cggaagcgagaatgtcggcttgagtaacgaaaacattggtga-gaatccaatgccccgaa 464 |||||| |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 1252 cggaagtgagaatgtcggcttgagtaacgaaaacaggggtgatgaatcccctgccccgaa 1311 Query: 465 aacccaaggtttcctc 480 | ||||||| |||||| Sbjct: 1312 agcccaagggttcctc 1327
>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome Length = 200799 Score = 250 bits (126), Expect = 4e-63 Identities = 198/222 (89%) Strand = Plus / Minus Query: 109 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 168 ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||| |||||| Sbjct: 170531 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagattaccagc 170472 Query: 169 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 228 ||||||||| ||||| |||||||||| |||||||||| | |||| ||||| ||||||| Sbjct: 170471 taaggccccaaaatggccgctcagtggcaaaggaggtgagagtgcccagacaaccaggag 170412 Query: 229 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 288 ||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| || Sbjct: 170411 gtttgcctagaagcagccatccttcaaagagtgcgtaatagctcactggtcaagcgctct 170352 Query: 289 tgcgctgaagatgaacggggctaagcgatctgccgaagctgt 330 |||| ||| ||||||||| ||||||| ||||||||||||| Sbjct: 170351 cgcgccgaaaatgaacgggactaagcggcctgccgaagctgt 170310 Score = 250 bits (126), Expect = 4e-63 Identities = 198/222 (89%) Strand = Plus / Plus Query: 109 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 168 ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||| |||||| Sbjct: 122395 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagattaccagc 122454 Query: 169 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 228 ||||||||| ||||| |||||||||| |||||||||| | |||| ||||| ||||||| Sbjct: 122455 taaggccccaaaatggccgctcagtggcaaaggaggtgagagtgcccagacaaccaggag 122514 Query: 229 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 288 ||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| || Sbjct: 122515 gtttgcctagaagcagccatccttcaaagagtgcgtaatagctcactggtcaagcgctct 122574 Query: 289 tgcgctgaagatgaacggggctaagcgatctgccgaagctgt 330 |||| ||| ||||||||| ||||||| ||||||||||||| Sbjct: 122575 cgcgccgaaaatgaacgggactaagcggcctgccgaagctgt 122616 Score = 101 bits (51), Expect = 2e-18 Identities = 111/131 (84%) Strand = Plus / Minus Query: 349 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 408 |||||||||||||||||||| || | ||||| | || ||| || ||| ||| | |||| Sbjct: 170294 ggtaggggagcgttccgcctgagggagaagctattccggaaggggtggtggacaaggcgg 170235 Query: 409 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 468 ||| |||||||||||||||||||||| |||| |||||||||||||| |||||||||||| Sbjct: 170234 aagtgagaatgtcggcttgagtaacgcaaacgctggtgagaatccaacgccccgaaaacc 170175 Query: 469 caaggtttcct 479 |||| ||||| Sbjct: 170174 taagggttcct 170164 Score = 101 bits (51), Expect = 2e-18 Identities = 111/131 (84%) Strand = Plus / Plus Query: 349 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 408 |||||||||||||||||||| || | ||||| | || ||| || ||| ||| | |||| Sbjct: 122632 ggtaggggagcgttccgcctgagggagaagctattccggaaggggtggtggacaaggcgg 122691 Query: 409 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 468 ||| |||||||||||||||||||||| |||| |||||||||||||| |||||||||||| Sbjct: 122692 aagtgagaatgtcggcttgagtaacgcaaacgctggtgagaatccaacgccccgaaaacc 122751 Query: 469 caaggtttcct 479 |||| ||||| Sbjct: 122752 taagggttcct 122762 Score = 79.8 bits (40), Expect = 8e-12 Identities = 62/68 (91%), Gaps = 1/68 (1%) Strand = Plus / Minus Query: 6 aggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 65 |||||||||| |||||| ||||||||||||||| ||||||||||||||| |||||||| Sbjct: 170617 aggggtaaag-cactgtctcggtgcgggctgcgaaagcggtaccaaatcgtagcaaactc 170559 Query: 66 tgaatact 73 |||||||| Sbjct: 170558 tgaatact 170551 Score = 79.8 bits (40), Expect = 8e-12 Identities = 62/68 (91%), Gaps = 1/68 (1%) Strand = Plus / Plus Query: 6 aggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 65 |||||||||| |||||| ||||||||||||||| ||||||||||||||| |||||||| Sbjct: 122309 aggggtaaag-cactgtctcggtgcgggctgcgaaagcggtaccaaatcgtagcaaactc 122367 Query: 66 tgaatact 73 |||||||| Sbjct: 122368 tgaatact 122375
>gb|AY335547.1| Aphanizomenon ovalisporum strain ILC-146 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3434 Score = 250 bits (126), Expect = 4e-63 Identities = 225/258 (87%) Strand = Plus / Plus Query: 108 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 167 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 2649 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 2708 Query: 168 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 227 |||||| ||| |||| | | || |||||||||||||||||| ||||| ||||| | |||| Sbjct: 2709 ctaaggtccccaaatcatcactaagtgataaaggaggtgggagtgcacagacaactagga 2768 Query: 228 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 287 ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 2769 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgctc 2828 Query: 288 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 347 ||||| ||| ||||||||||||||| ||| | ||||||||||||||| |||| || Sbjct: 2829 ctgcgccgaaaatgaacggggctaagtgatgtaccgaagctgtgggattaagaaattaat 2888 Query: 348 cggtaggggagcgttccg 365 |||||||||||||||||| Sbjct: 2889 cggtaggggagcgttccg 2906 Score = 95.6 bits (48), Expect = 1e-16 Identities = 63/68 (92%) Strand = Plus / Plus Query: 413 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 472 ||||||||||||||||||| || |||||||||||||||||||||||||||||| || ||| Sbjct: 2955 gagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaaccctaag 3014 Query: 473 gtttcctc 480 | |||||| Sbjct: 3015 ggttcctc 3022 Score = 75.8 bits (38), Expect = 1e-10 Identities = 60/66 (90%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 7 ggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 66 ||||||||| |||||||||||||||||||| | || ||||||||||||||| ||||||| Sbjct: 2570 ggggtaaag-cactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactca 2628 Query: 67 gaatac 72 |||||| Sbjct: 2629 gaatac 2634
>gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2937 Score = 250 bits (126), Expect = 4e-63 Identities = 198/222 (89%) Strand = Plus / Plus Query: 109 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 168 ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||| |||||| Sbjct: 986 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagattaccagc 1045 Query: 169 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 228 ||||||||| ||||| |||||||||| |||||||||| | |||| ||||| ||||||| Sbjct: 1046 taaggccccaaaatggccgctcagtggcaaaggaggtgagagtgcccagacaaccaggag 1105 Query: 229 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 288 ||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| || Sbjct: 1106 gtttgcctagaagcagccatccttgaaagagtgcgtaatagctcactggtcaagcgctct 1165 Query: 289 tgcgctgaagatgaacggggctaagcgatctgccgaagctgt 330 |||| ||| ||||||||| ||||||| ||||||||||||| Sbjct: 1166 cgcgccgaaaatgaacgggactaagcggcctgccgaagctgt 1207 Score = 101 bits (51), Expect = 2e-18 Identities = 111/131 (84%) Strand = Plus / Plus Query: 349 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 408 |||||||||||||||||||| || | ||||| | || ||| || ||| ||| | |||| Sbjct: 1223 ggtaggggagcgttccgcctgagggagaagctattccggaaggggtggtggacaaggcgg 1282 Query: 409 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 468 ||| |||||||||||||||||||||| |||| |||||||||||||| |||||||||||| Sbjct: 1283 aagtgagaatgtcggcttgagtaacgcaaacgctggtgagaatccaacgccccgaaaacc 1342 Query: 469 caaggtttcct 479 |||| ||||| Sbjct: 1343 taagggttcct 1353 Score = 79.8 bits (40), Expect = 8e-12 Identities = 62/68 (91%), Gaps = 1/68 (1%) Strand = Plus / Plus Query: 6 aggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 65 |||||||||| |||||| ||||||||||||||| ||||||||||||||| |||||||| Sbjct: 900 aggggtaaag-cactgtctcggtgcgggctgcgaaagcggtaccaaatcgtagcaaactc 958 Query: 66 tgaatact 73 |||||||| Sbjct: 959 tgaatact 966
>gb|AY584518.1| Oscillatoria sp. strain PCC 6506 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 248 bits (125), Expect = 1e-62 Identities = 201/225 (89%), Gaps = 1/225 (0%) Strand = Plus / Plus Query: 108 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 167 |||||| ||||| ||||||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 567 gccagtcagacggtgggggataagctccatcgtcgagagggaaacagcccagaccaccag 626 Query: 168 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 227 |||||| ||| ||||||| ||| |||||||||||||||| | ||||| |||| |||||| Sbjct: 627 ctaaggtccccaaatgactgctaagtgataaaggaggtgagagtgcactgacaaccagga 686 Query: 228 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 287 ||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 687 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctc 746 Query: 288 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 332 || ||| ||| |||||||||||||||| ||| |||||||||||| Sbjct: 747 tt-cgccgaaaatgaacggggctaagcagtctaccgaagctgtgg 790 Score = 99.6 bits (50), Expect = 8e-18 Identities = 63/66 (95%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 7 ggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 66 ||||||||| |||||||||||||||||||||| |||||||||||||||||| |||||||| Sbjct: 488 ggggtaaag-cactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactct 546 Query: 67 gaatac 72 |||||| Sbjct: 547 gaatac 552 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 405 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 464 ||||||| ||||||||||||||||||| || ||| | ||||||||||| | ||||||| Sbjct: 863 gcggaagtgagaatgtcggcttgagtagcgcaaatgtaggtgagaatcctacaccccgaa 922 Query: 465 aacccaaggtttcc 478 | || |||| |||| Sbjct: 923 accctaagggttcc 936
>gb|L43542.1|TBXCPRRNL Trebouxia aggregata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5398 Score = 248 bits (125), Expect = 1e-62 Identities = 200/225 (88%) Strand = Plus / Plus Query: 109 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 168 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 1090 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 1149 Query: 169 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 228 ||||||||| ||||||||||| |||| |||||| ||| | ||| | ||| |||| || Sbjct: 1150 taaggccccaaaatgaccgctaagtggcaaaggatgtgagaatgctgaaacaaccagaag 1209 Query: 229 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 288 |||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| || Sbjct: 1210 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtagagcgttct 1269 Query: 289 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtggg 333 ||||| ||| ||||||||| ||||||| ||||||||||||||||| Sbjct: 1270 tgcgccgaaaatgaacgggactaagcggtctgccgaagctgtggg 1314 Score = 131 bits (66), Expect = 2e-27 Identities = 75/78 (96%) Strand = Plus / Plus Query: 403 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 462 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1394 aagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 1453 Query: 463 aaaacccaaggtttcctc 480 |||||| |||| |||||| Sbjct: 1454 aaaacctaaggcttcctc 1471 Score = 91.7 bits (46), Expect = 2e-15 Identities = 68/74 (91%), Gaps = 1/74 (1%) Strand = Plus / Plus Query: 3 tctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 62 ||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||| Sbjct: 1001 tctaggggtaaag-cactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaa 1059 Query: 63 ctctgaatactaga 76 || |||||||||| Sbjct: 1060 ctaagaatactaga 1073
>gb|AY584508.1| Anabaena sphaerica strain UUTEX B 1616 23S ribosomal RNA gene, partial sequence Length = 2389 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Plus Query: 108 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 167 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 625 Query: 168 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 227 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 685 Query: 228 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 287 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 745 Query: 288 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 335 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 746 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 793 Score = 97.6 bits (49), Expect = 3e-17 Identities = 67/73 (91%) Strand = Plus / Plus Query: 406 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 465 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 867 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 926 Query: 466 acccaaggtttcc 478 || |||| |||| Sbjct: 927 ccctaagggttcc 939 Score = 75.8 bits (38), Expect = 1e-10 Identities = 60/66 (90%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 7 ggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 66 ||||||||| |||||||||||||||||||| | || ||||||||||||||| ||||||| Sbjct: 487 ggggtaaag-cactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactca 545 Query: 67 gaatac 72 |||||| Sbjct: 546 gaatac 551
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Minus Query: 108 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 167 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 5434418 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 5434359 Query: 168 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 227 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 5434358 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 5434299 Query: 228 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 287 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 5434298 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 5434239 Query: 288 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 335 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 5434238 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 5434191 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Plus Query: 108 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 167 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 3897020 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 3897079 Query: 168 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 227 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 3897080 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 3897139 Query: 228 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 287 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 3897140 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 3897199 Query: 288 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 335 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 3897200 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 3897247 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Minus Query: 108 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 167 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 2807139 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 2807080 Query: 168 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 227 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 2807079 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 2807020 Query: 228 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 287 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 2807019 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 2806960 Query: 288 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 335 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 2806959 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 2806912 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Plus Query: 108 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 167 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 1005863 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 1005922 Query: 168 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 227 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 1005923 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 1005982 Query: 228 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 287 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 1005983 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 1006042 Query: 288 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 335 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 1006043 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 1006090 Score = 97.6 bits (49), Expect = 3e-17 Identities = 67/73 (91%) Strand = Plus / Minus Query: 406 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 465 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 5434116 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 5434057 Query: 466 acccaaggtttcc 478 || |||| |||| Sbjct: 5434056 ccctaagggttcc 5434044 Score = 97.6 bits (49), Expect = 3e-17 Identities = 67/73 (91%) Strand = Plus / Plus Query: 406 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 465 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 3897322 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 3897381 Query: 466 acccaaggtttcc 478 || |||| |||| Sbjct: 3897382 ccctaagggttcc 3897394 Score = 97.6 bits (49), Expect = 3e-17 Identities = 67/73 (91%) Strand = Plus / Minus Query: 406 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 465 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 2806837 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 2806778 Query: 466 acccaaggtttcc 478 || |||| |||| Sbjct: 2806777 ccctaagggttcc 2806765 Score = 97.6 bits (49), Expect = 3e-17 Identities = 67/73 (91%) Strand = Plus / Plus Query: 406 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 465 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 1006165 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 1006224 Query: 466 acccaaggtttcc 478 || |||| |||| Sbjct: 1006225 ccctaagggttcc 1006237 Score = 75.8 bits (38), Expect = 1e-10 Identities = 60/66 (90%), Gaps = 1/66 (1%) Strand = Plus / Minus Query: 7 ggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 66 ||||||||| |||||||||||||||||||| | || ||||||||||||||| ||||||| Sbjct: 5434497 ggggtaaag-cactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactca 5434439 Query: 67 gaatac 72 |||||| Sbjct: 5434438 gaatac 5434433 Score = 75.8 bits (38), Expect = 1e-10 Identities = 60/66 (90%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 7 ggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 66 ||||||||| |||||||||||||||||||| | || ||||||||||||||| ||||||| Sbjct: 3896941 ggggtaaag-cactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactca 3896999 Query: 67 gaatac 72 |||||| Sbjct: 3897000 gaatac 3897005 Score = 75.8 bits (38), Expect = 1e-10 Identities = 60/66 (90%), Gaps = 1/66 (1%) Strand = Plus / Minus Query: 7 ggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 66 ||||||||| |||||||||||||||||||| | || ||||||||||||||| ||||||| Sbjct: 2807218 ggggtaaag-cactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactca 2807160 Query: 67 gaatac 72 |||||| Sbjct: 2807159 gaatac 2807154 Score = 75.8 bits (38), Expect = 1e-10 Identities = 60/66 (90%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 7 ggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 66 ||||||||| |||||||||||||||||||| | || ||||||||||||||| ||||||| Sbjct: 1005784 ggggtaaag-cactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactca 1005842 Query: 67 gaatac 72 |||||| Sbjct: 1005843 gaatac 1005848
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Minus Query: 108 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 167 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 5944458 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 5944399 Query: 168 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 227 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 5944398 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 5944339 Query: 228 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 287 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 5944338 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 5944279 Query: 288 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 335 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 5944278 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 5944231 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Minus Query: 108 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 167 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 4916814 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 4916755 Query: 168 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 227 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 4916754 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 4916695 Query: 228 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 287 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 4916694 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 4916635 Query: 288 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 335 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 4916634 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 4916587 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Plus Query: 108 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 167 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 2503482 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 2503541 Query: 168 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 227 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 2503542 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 2503601 Query: 228 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 287 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 2503602 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 2503661 Query: 288 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 335 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 2503662 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 2503709 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Plus Query: 108 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 167 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 2378691 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 2378750 Query: 168 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 227 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 2378751 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 2378810 Query: 228 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 287 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 2378811 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 2378870 Query: 288 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 335 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 2378871 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 2378918 Score = 97.6 bits (49), Expect = 3e-17 Identities = 67/73 (91%) Strand = Plus / Minus Query: 406 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 465 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 5944159 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 5944100 Query: 466 acccaaggtttcc 478 || |||| |||| Sbjct: 5944099 ccctaagggttcc 5944087 Score = 97.6 bits (49), Expect = 3e-17 Identities = 67/73 (91%) Strand = Plus / Minus Query: 406 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 465 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 4916515 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 4916456 Query: 466 acccaaggtttcc 478 || |||| |||| Sbjct: 4916455 ccctaagggttcc 4916443 Score = 97.6 bits (49), Expect = 3e-17 Identities = 67/73 (91%) Strand = Plus / Plus Query: 406 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 465 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 2503781 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 2503840 Query: 466 acccaaggtttcc 478 || |||| |||| Sbjct: 2503841 ccctaagggttcc 2503853 Score = 97.6 bits (49), Expect = 3e-17 Identities = 67/73 (91%) Strand = Plus / Plus Query: 406 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 465 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 2380461 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 2380520 Query: 466 acccaaggtttcc 478 || |||| |||| Sbjct: 2380521 ccctaagggttcc 2380533 Score = 75.8 bits (38), Expect = 1e-10 Identities = 60/66 (90%), Gaps = 1/66 (1%) Strand = Plus / Minus Query: 7 ggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 66 ||||||||| |||||||||||||||||||| | || ||||||||||||||| ||||||| Sbjct: 5944537 ggggtaaag-cactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactca 5944479 Query: 67 gaatac 72 |||||| Sbjct: 5944478 gaatac 5944473 Score = 75.8 bits (38), Expect = 1e-10 Identities = 60/66 (90%), Gaps = 1/66 (1%) Strand = Plus / Minus Query: 7 ggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 66 ||||||||| |||||||||||||||||||| | || ||||||||||||||| ||||||| Sbjct: 4916893 ggggtaaag-cactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactca 4916835 Query: 67 gaatac 72 |||||| Sbjct: 4916834 gaatac 4916829 Score = 75.8 bits (38), Expect = 1e-10 Identities = 60/66 (90%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 7 ggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 66 ||||||||| |||||||||||||||||||| | || ||||||||||||||| ||||||| Sbjct: 2503403 ggggtaaag-cactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactca 2503461 Query: 67 gaatac 72 |||||| Sbjct: 2503462 gaatac 2503467 Score = 75.8 bits (38), Expect = 1e-10 Identities = 60/66 (90%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 7 ggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 66 ||||||||| |||||||||||||||||||| | || ||||||||||||||| ||||||| Sbjct: 2378612 ggggtaaag-cactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactca 2378670 Query: 67 gaatac 72 |||||| Sbjct: 2378671 gaatac 2378676
>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2665 Score = 244 bits (123), Expect = 2e-61 Identities = 198/223 (88%) Strand = Plus / Plus Query: 109 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 168 |||||||||| ||||||||||||||||| ||| ||||||||||||||| ||||||||| Sbjct: 972 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagt 1031 Query: 169 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 228 ||||||||||||||||| ||| |||| |||||||||| | |||| ||||| ||||||| Sbjct: 1032 taaggcccctaaatgactgctaagtggcaaaggaggtgagagtgcttagacaaccaggag 1091 Query: 229 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 288 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 1092 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctct 1151 Query: 289 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 331 ||||| || ||||||||| |||||| ||||||||||||||| Sbjct: 1152 tgcgcctaaaatgaacgggactaagcagtctgccgaagctgtg 1194 Score = 139 bits (70), Expect = 9e-30 Identities = 79/82 (96%) Strand = Plus / Plus Query: 399 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 458 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1282 gacgacgcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 1341 Query: 459 cccgaaaacccaaggtttcctc 480 |||||||||| ||||||||||| Sbjct: 1342 cccgaaaacctaaggtttcctc 1363 Score = 67.9 bits (34), Expect = 3e-08 Identities = 65/74 (87%), Gaps = 1/74 (1%) Strand = Plus / Plus Query: 3 tctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 62 ||||||||||||| |||||||||||||||||||| | | |||||||||||| ||||| Sbjct: 884 tctaggggtaaag-cactgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaa 942 Query: 63 ctctgaatactaga 76 ||| |||||||||| Sbjct: 943 ctcagaatactaga 956
>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast genes for chloroplast products Length = 4577 Score = 244 bits (123), Expect = 2e-61 Identities = 198/223 (88%) Strand = Plus / Plus Query: 109 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 168 |||||||||| ||||||||||||||||| ||| ||||||||||||||| ||||||||| Sbjct: 2741 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagt 2800 Query: 169 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 228 ||||||||||||||||| ||| |||| |||||||||| | |||| ||||| ||||||| Sbjct: 2801 taaggcccctaaatgactgctaagtggcaaaggaggtgagagtgcttagacaaccaggag 2860 Query: 229 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 288 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 2861 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctct 2920 Query: 289 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 331 ||||| || ||||||||| |||||| ||||||||||||||| Sbjct: 2921 tgcgcctaaaatgaacgggactaagcagtctgccgaagctgtg 2963 Score = 139 bits (70), Expect = 9e-30 Identities = 79/82 (96%) Strand = Plus / Plus Query: 399 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 458 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3051 gacgacgcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 3110 Query: 459 cccgaaaacccaaggtttcctc 480 |||||||||| ||||||||||| Sbjct: 3111 cccgaaaacctaaggtttcctc 3132 Score = 67.9 bits (34), Expect = 3e-08 Identities = 65/74 (87%), Gaps = 1/74 (1%) Strand = Plus / Plus Query: 3 tctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 62 ||||||||||||| |||||||||||||||||||| | | |||||||||||| ||||| Sbjct: 2653 tctaggggtaaag-cactgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaa 2711 Query: 63 ctctgaatactaga 76 ||| |||||||||| Sbjct: 2712 ctcagaatactaga 2725
>gb|AY333417.1| Microcystis sp. 'Brown' 16S ribosomal RNA gene, partial sequence; tRNA-Ile gene and 16S-23S ribosomal RNA intergenic spacer, complete sequences; and 23S ribosomal RNA gene, partial sequence Length = 3321 Score = 238 bits (120), Expect = 1e-59 Identities = 198/224 (88%) Strand = Plus / Plus Query: 109 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 168 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 2482 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 2541 Query: 169 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 228 ||||| ||| |||||| || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 2542 taaggtccccaaatgataactaagtgagaaaggaggtgggagtgcattgacaaccaggag 2601 Query: 229 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 288 ||||||||||||||||| |||||| ||||||||||||||||||||||| || ||||| | Sbjct: 2602 gtttgcctagaagcagcaacccttaaaagagtgcgtaatagctcactggtcaagcgctcc 2661 Query: 289 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 332 ||||| ||| ||||||||||||||| |||| |||||||||||| Sbjct: 2662 tgcgccgaaaatgaacggggctaagttatctaccgaagctgtgg 2705 Score = 65.9 bits (33), Expect = 1e-07 Identities = 63/73 (86%) Strand = Plus / Plus Query: 408 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 467 |||| |||||||||||||| |||| |||||| | ||||||||||| | |||||||| | Sbjct: 2778 gaagtgagaatgtcggcttaagtagcgaaaatgtgggtgagaatcccacaccccgaaacc 2837 Query: 468 ccaaggtttcctc 480 ||||||||||||| Sbjct: 2838 ccaaggtttcctc 2850 Score = 60.0 bits (30), Expect = 7e-06 Identities = 58/66 (87%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 7 ggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 66 ||||||||| |||||||||| |||||||| | || ||||||||| ||||||||||||| Sbjct: 2403 ggggtaaag-cactgtttcgccgcgggctgggagaccggtaccaaggcgaggcaaactct 2461 Query: 67 gaatac 72 |||||| Sbjct: 2462 gaatac 2467
>gb|AY584510.1| Anabaena sp. strain PCC 9109 23S ribosomal RNA gene, partial sequence Length = 2385 Score = 238 bits (120), Expect = 1e-59 Identities = 201/228 (88%) Strand = Plus / Plus Query: 108 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 167 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 625 Query: 168 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 227 |||||| ||| |||| | | || |||||||||||||||| | |||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcactaagtgataaaggaggtgagattgcatagacaactagga 685 Query: 228 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 287 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcggtc 745 Query: 288 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 335 |||||| ||| ||||||||||||||| ||| | ||||||||||||||| Sbjct: 746 ttgcgccgaaaatgaacggggctaagtgatgtaccgaagctgtgggat 793 Score = 103 bits (52), Expect = 5e-19 Identities = 73/80 (91%) Strand = Plus / Plus Query: 399 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 458 |||||| |||||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 859 gacgaaacggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 918 Query: 459 cccgaaaacccaaggtttcc 478 ||||||| || |||| |||| Sbjct: 919 cccgaaaccctaagggttcc 938 Score = 79.8 bits (40), Expect = 8e-12 Identities = 62/68 (91%), Gaps = 1/68 (1%) Strand = Plus / Plus Query: 6 aggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 65 |||||||||| |||||||||||||||||||| | || ||||||||||||||| ||||||| Sbjct: 486 aggggtaaag-cactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactc 544 Query: 66 tgaatact 73 ||||||| Sbjct: 545 agaatact 552
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 238 bits (120), Expect = 1e-59 Identities = 201/228 (88%) Strand = Plus / Plus Query: 108 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 167 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 944 gccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcactag 1003 Query: 168 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 227 |||||||||| |||||| || | ||||| |||||||||| | |||| | ||| |||||| Sbjct: 1004 ctaaggccccaaaatgatcgttaagtgacaaaggaggtgagaatgcagaaacaaccagga 1063 Query: 228 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 287 ||||||| |||||||||||| |||||||||||||||||||||||||||| | ||||| | Sbjct: 1064 ggtttgcttagaagcagccatcctttaaagagtgcgtaatagctcactggtggagcgttc 1123 Query: 288 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 335 |||||| ||| ||| |||| |||| ||||||||||||||||||||| Sbjct: 1124 ttgcgccgaaaatgtccgggactaaatgatctgccgaagctgtgggat 1171 Score = 131 bits (66), Expect = 2e-27 Identities = 78/82 (95%) Strand = Plus / Plus Query: 399 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 458 ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1238 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1297 Query: 459 cccgaaaacccaaggtttcctc 480 |||||||||| |||| |||||| Sbjct: 1298 cccgaaaacctaaggattcctc 1319 Score = 107 bits (54), Expect = 3e-20 Identities = 70/74 (94%), Gaps = 1/74 (1%) Strand = Plus / Plus Query: 5 taggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 64 ||||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||| Sbjct: 859 taggggtaaag-cactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaact 917 Query: 65 ctgaatactagata 78 |||||||||||||| Sbjct: 918 ctgaatactagata 931
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 238 bits (120), Expect = 1e-59 Identities = 201/228 (88%) Strand = Plus / Plus Query: 108 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 167 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 25753 gccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcactag 25812 Query: 168 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 227 |||||||||| |||||| || | ||||| |||||||||| | |||| | ||| |||||| Sbjct: 25813 ctaaggccccaaaatgatcgttaagtgacaaaggaggtgagaatgcagaaacaaccagga 25872 Query: 228 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 287 ||||||| |||||||||||| |||||||||||||||||||||||||||| | ||||| | Sbjct: 25873 ggtttgcttagaagcagccatcctttaaagagtgcgtaatagctcactggtggagcgttc 25932 Query: 288 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 335 |||||| ||| ||| |||| |||| ||||||||||||||||||||| Sbjct: 25933 ttgcgccgaaaatgtccgggactaaatgatctgccgaagctgtgggat 25980 Score = 131 bits (66), Expect = 2e-27 Identities = 78/82 (95%) Strand = Plus / Plus Query: 399 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 458 ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 26047 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 26106 Query: 459 cccgaaaacccaaggtttcctc 480 |||||||||| |||| |||||| Sbjct: 26107 cccgaaaacctaaggattcctc 26128 Score = 107 bits (54), Expect = 3e-20 Identities = 70/74 (94%), Gaps = 1/74 (1%) Strand = Plus / Plus Query: 5 taggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 64 ||||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||| Sbjct: 25668 taggggtaaag-cactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaact 25726 Query: 65 ctgaatactagata 78 |||||||||||||| Sbjct: 25727 ctgaatactagata 25740
>emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome Length = 366924 Score = 236 bits (119), Expect = 5e-59 Identities = 141/147 (95%), Gaps = 1/147 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 365043 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 365101 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 365102 aactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgagacgg 365161 Query: 121 tgggggataagcttcatcgtcgagagg 147 ||||||||||||||||||||||||||| Sbjct: 365162 tgggggataagcttcatcgtcgagagg 365188 Score = 198 bits (100), Expect = 1e-47 Identities = 128/136 (94%), Gaps = 1/136 (0%) Strand = Plus / Minus Query: 142 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 201 |||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||| Sbjct: 129347 gagagggaaacagcccggatcaccagctaaggcccccaaatggccgctcagttataaagg 129288 Query: 202 aggtgggggtgcaaagacagcc-aggaggtttgcctagaagcagccaccctttaaagagt 260 |||| |||||||| |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 129287 aggtaggggtgcagagacagccaaggaggtttgcctagaagcagccacccttgaaagagc 129228 Query: 261 gcgtaatagctcactg 276 |||||||||||||||| Sbjct: 129227 gcgtaatagctcactg 129212 Score = 48.1 bits (24), Expect = 0.027 Identities = 51/60 (85%) Strand = Plus / Minus Query: 217 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 276 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 10906 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 10847 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 139 gtcgagagggaaacagcccggatc 162 ||||||||||||||||||| |||| Sbjct: 10984 gtcgagagggaaacagcccagatc 10961
>gb|AY584526.1| Leptolyngbya boryana PCC 6306 23S ribosomal RNA gene, partial sequence Length = 2444 Score = 234 bits (118), Expect = 2e-58 Identities = 184/206 (89%) Strand = Plus / Plus Query: 108 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 167 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 625 Query: 168 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 227 |||||| ||| |||| || ||||||||||||||||||||| |||| ||||| |||||| Sbjct: 626 ctaaggtccccaaataacacctcagtgataaaggaggtgggaatgcagagacaaccagga 685 Query: 228 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 287 |||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgttc 745 Query: 288 ttgcgctgaagatgaacggggctaag 313 ||||| ||| ||||||||||||||| Sbjct: 746 ctgcgccgaaaatgaacggggctaag 771 Score = 99.6 bits (50), Expect = 8e-18 Identities = 74/82 (90%) Strand = Plus / Plus Query: 399 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 458 |||||||| |||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 860 gacgaagcagaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 919 Query: 459 cccgaaaacccaaggtttcctc 480 || |||| || |||| |||||| Sbjct: 920 cctgaaatcctaagggttcctc 941 Score = 77.8 bits (39), Expect = 3e-11 Identities = 64/71 (90%), Gaps = 1/71 (1%) Strand = Plus / Plus Query: 7 ggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 66 ||||||||| ||||| |||||||||||||| | || ||||||||||||||| |||||||| Sbjct: 487 ggggtaaag-cactgattcggtgcgggctgggagaccggtaccaaatcgagtcaaactct 545 Query: 67 gaatactagat 77 |||||| |||| Sbjct: 546 gaataccagat 556
>gb|AY584511.1| Tolypothrix sp. PCC 7601 23S ribosomal RNA gene, partial sequence Length = 2383 Score = 232 bits (117), Expect = 8e-58 Identities = 227/262 (86%), Gaps = 5/262 (1%) Strand = Plus / Plus Query: 108 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 167 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 168 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 227 |||||| ||| |||| | |||| ||||| |||||||||| | ||||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgagaaaggaggtgagagtgcatagacaactagga 685 Query: 228 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 287 ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgctc 745 Query: 288 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt----caaaat 343 || ||| ||| ||||||||||||||||||| | ||||||||||||||| | ||||| Sbjct: 746 tt-cgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggatttgttgaaaaat 804 Query: 344 gcatcggtaggggagcgttccg 365 |||||||||||||||||||| Sbjct: 805 aaatcggtaggggagcgttccg 826 Score = 75.8 bits (38), Expect = 1e-10 Identities = 60/66 (90%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 7 ggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 66 ||||||||| |||||||||||||||||||| | || ||||||||||||||| ||||||| Sbjct: 487 ggggtaaag-cactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactca 545 Query: 67 gaatac 72 |||||| Sbjct: 546 gaatac 551 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 399 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 458 |||||| |||||| ||||||||||||||||||| || ||| || ||||||||| || | Sbjct: 861 gacgaaacggaagtgagaatgtcggcttgagtagcgcaaatatgtgtgagaatcacatac 920 Query: 459 cccgaaaacccaaggtttcc 478 ||||||| || |||| |||| Sbjct: 921 cccgaaaccctaagggttcc 940
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 232 bits (117), Expect = 8e-58 Identities = 312/373 (83%), Gaps = 3/373 (0%) Strand = Plus / Plus Query: 109 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc-ggatcaccag 167 ||||||||||| || |||||||||||||| ||||| ||||||||||||| ||| |||| | Sbjct: 953 ccagtgagacggtgagggataagcttcattgtcgaaagggaaacagcccaggaccaccgg 1012 Query: 168 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 227 ||||||||||| ||||| || ||||| ||||| ||| | ||||| ||||| |||| | Sbjct: 1013 ctaaggcccctcaatgattcctaagtgacgaaggatgtgagagtgcagagacaaccagaa 1072 Query: 228 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 287 ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| | Sbjct: 1073 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctc 1132 Query: 288 ttgcgctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgca 346 | |||| ||| ||||| ||| || ||| |||||||||||| |||| |||| ||| | || Sbjct: 1133 tggcgccgaaaatgaaagggactcaaggaatctgccgaagccgtggcatgt-aaattaca 1191 Query: 347 tcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagc 406 | ||||||||||||||| | |||| ||||| |||||||| | || ||| || | Sbjct: 1192 tgggtaggggagcgttctgttttagttagaagcgtaagcgaaagcatgtgtggacaaaac 1251 Query: 407 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 466 |||| |||||||||||||||||||||| |||| | ||||||||||| |||||||||||| Sbjct: 1252 agaagtgagaatgtcggcttgagtaacgcaaacgtgggtgagaatcccatgccccgaaaa 1311 Query: 467 cccaaggtttcct 479 || |||| ||||| Sbjct: 1312 cctaagggttcct 1324 Score = 115 bits (58), Expect = 1e-22 Identities = 71/74 (95%), Gaps = 1/74 (1%) Strand = Plus / Plus Query: 2 atctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 61 |||||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||| Sbjct: 863 atctaggggtaaag-cactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaa 921 Query: 62 actctgaatactag 75 |||||||||||||| Sbjct: 922 actctgaatactag 935
>gb|AY584523.1| Microcystis sp. strain PCC 7820 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 230 bits (116), Expect = 3e-57 Identities = 198/224 (88%), Gaps = 1/224 (0%) Strand = Plus / Plus Query: 109 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 168 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 566 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 625 Query: 169 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 228 ||||| ||| |||||| || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 626 taaggtccccaaatgataactaagtgagaaaggaggtgggagtgcattgacaaccaggag 685 Query: 229 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 288 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 686 gtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctcc 745 Query: 289 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 332 | ||| ||| ||||||||||||||| |||| |||||||||||| Sbjct: 746 t-cgccgaaaatgaacggggctaagttatctaccgaagctgtgg 788 Score = 65.9 bits (33), Expect = 1e-07 Identities = 63/73 (86%) Strand = Plus / Plus Query: 408 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 467 |||| |||||||||||||| |||| |||||| | ||||||||||| | |||||||| | Sbjct: 861 gaagtgagaatgtcggcttaagtagcgaaaatgtgggtgagaatcccacaccccgaaacc 920 Query: 468 ccaaggtttcctc 480 ||||||||||||| Sbjct: 921 ccaaggtttcctc 933 Score = 60.0 bits (30), Expect = 7e-06 Identities = 58/66 (87%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 7 ggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 66 ||||||||| |||||||||| |||||||| | || ||||||||| ||||||||||||| Sbjct: 487 ggggtaaag-cactgtttcgccgcgggctgggagaccggtaccaaggcgaggcaaactct 545 Query: 67 gaatac 72 |||||| Sbjct: 546 gaatac 551
>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial sequence Length = 2446 Score = 230 bits (116), Expect = 3e-57 Identities = 201/228 (88%), Gaps = 1/228 (0%) Strand = Plus / Plus Query: 108 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 167 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 168 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 227 |||||| ||| |||| | |||| |||||||||||||||| | ||||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagagtgcacagacaactagga 685 Query: 228 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 287 ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgctc 745 Query: 288 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 335 | ||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 746 ct-cgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 792 Score = 115 bits (58), Expect = 1e-22 Identities = 76/82 (92%) Strand = Plus / Plus Query: 399 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 458 |||||| |||||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 859 gacgaaacggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 918 Query: 459 cccgaaaacccaaggtttcctc 480 ||||||| || ||||||||||| Sbjct: 919 cccgaaaccctaaggtttcctc 940 Score = 83.8 bits (42), Expect = 5e-13 Identities = 61/66 (92%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 7 ggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 66 ||||||||| |||||||||||||||||||| | || ||||||||||||||| |||||||| Sbjct: 487 ggggtaaag-cactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactct 545 Query: 67 gaatac 72 |||||| Sbjct: 546 gaatac 551 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 atcggtaggggagcgttccg 365 |||||||||||||||||||| Sbjct: 805 atcggtaggggagcgttccg 824
>gb|AY584512.1| Anabaena variabilis strain ATCC 29413 23S ribosomal RNA gene, partial sequence Length = 2390 Score = 230 bits (116), Expect = 3e-57 Identities = 201/228 (88%), Gaps = 1/228 (0%) Strand = Plus / Plus Query: 108 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 167 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 625 Query: 168 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 227 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 685 Query: 228 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 287 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 745 Query: 288 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 335 || ||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 746 tt-cgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 792 Score = 97.6 bits (49), Expect = 3e-17 Identities = 67/73 (91%) Strand = Plus / Plus Query: 406 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 465 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 867 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 926 Query: 466 acccaaggtttcc 478 || |||| |||| Sbjct: 927 ccctaagggttcc 939 Score = 75.8 bits (38), Expect = 1e-10 Identities = 60/66 (90%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 7 ggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 66 ||||||||| |||||||||||||||||||| | || ||||||||||||||| ||||||| Sbjct: 487 ggggtaaag-cactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactca 545 Query: 67 gaatac 72 |||||| Sbjct: 546 gaatac 551
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 228 bits (115), Expect = 1e-56 Identities = 196/223 (87%) Strand = Plus / Minus Query: 110 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 169 |||||||||| ||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 2050904 cagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagaccaccaact 2050845 Query: 170 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 229 |||||||| || | ||||||||||| |||||||||||||||| ||||| |||||||| Sbjct: 2050844 aaggcccccaagccatcgctcagtgattaaggaggtgggggtgcccagacaaccaggagg 2050785 Query: 230 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 289 || || ||||||||||||||||||||| ||||||||| |||| |||| || ||||||||| Sbjct: 2050784 ttggcttagaagcagccaccctttaaacagtgcgtaacagctgactggtcaagcgccctt 2050725 Query: 290 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 332 |||| ||| ||| ||||||||||||||| ||||||| ||||| Sbjct: 2050724 gcgccgaaaatggacggggctaagcgatgcgccgaagttgtgg 2050682 Score = 228 bits (115), Expect = 1e-56 Identities = 196/223 (87%) Strand = Plus / Plus Query: 110 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 169 |||||||||| ||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 1450597 cagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagaccaccaact 1450656 Query: 170 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 229 |||||||| || | ||||||||||| |||||||||||||||| ||||| |||||||| Sbjct: 1450657 aaggcccccaagccatcgctcagtgattaaggaggtgggggtgcccagacaaccaggagg 1450716 Query: 230 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 289 || || ||||||||||||||||||||| ||||||||| |||| |||| || ||||||||| Sbjct: 1450717 ttggcttagaagcagccaccctttaaacagtgcgtaacagctgactggtcaagcgccctt 1450776 Query: 290 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 332 |||| ||| ||| ||||||||||||||| ||||||| ||||| Sbjct: 1450777 gcgccgaaaatggacggggctaagcgatgcgccgaagttgtgg 1450819 Score = 115 bits (58), Expect = 1e-22 Identities = 112/130 (86%) Strand = Plus / Minus Query: 349 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 408 |||||||||||||||||| ||| | ||||| | |||||||| | || ||||| |||| Sbjct: 2050673 ggtaggggagcgttccgcagtagggtgaagcgtcagcgaaagcagacgtggacgaggcgg 2050614 Query: 409 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 468 ||| |||||||| |||||||||| || | ||||||||||||||||||||||||||||||| Sbjct: 2050613 aagtgagaatgttggcttgagtagcgcagacattggtgagaatccaatgccccgaaaacc 2050554 Query: 469 caaggtttcc 478 ||||| |||| Sbjct: 2050553 caagggttcc 2050544 Score = 115 bits (58), Expect = 1e-22 Identities = 112/130 (86%) Strand = Plus / Plus Query: 349 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 408 |||||||||||||||||| ||| | ||||| | ||| |||| | || ||||| |||| Sbjct: 1450828 ggtaggggagcgttccgcagtagggtgaagcgtcagcggaagcagacgtggacgaggcgg 1450887 Query: 409 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 468 ||| |||||||| |||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 1450888 aagtgagaatgttggcttgagtagcgcaaacattggtgagaatccaatgccccgaaaacc 1450947 Query: 469 caaggtttcc 478 ||||| |||| Sbjct: 1450948 caagggttcc 1450957 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 24 tcggtgcgggctgcgcgagcggtaccaaatcga 56 ||||||||||| ||| |||| |||||||||||| Sbjct: 2050968 tcggtgcgggcggcgagagctgtaccaaatcga 2050936 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 24 tcggtgcgggctgcgcgagcggtaccaaatcga 56 ||||||||||| ||| |||| |||||||||||| Sbjct: 1450533 tcggtgcgggcggcgagagctgtaccaaatcga 1450565
>gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete genome Length = 151933 Score = 228 bits (115), Expect = 1e-56 Identities = 199/227 (87%) Strand = Plus / Plus Query: 109 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 168 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 137442 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 137501 Query: 169 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 228 ||||||||||||||| | ||| |||| |||||| ||| | |||| ||||| |||| || Sbjct: 137502 taaggcccctaaatggcagctaagtggcaaaggatgtgagaatgcagagacaaccagaag 137561 Query: 229 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 288 |||||| |||||||||||| |||| ||||||||||||||||||||||| | ||||| || Sbjct: 137562 gtttgcttagaagcagccatccttaaaagagtgcgtaatagctcactggtagagcgttct 137621 Query: 289 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 335 ||||| ||| ||||||||| |||||| |||||||||||||||||| Sbjct: 137622 tgcgccgaaaatgaacgggactaagctgcctgccgaagctgtgggat 137668 Score = 228 bits (115), Expect = 1e-56 Identities = 199/227 (87%) Strand = Plus / Minus Query: 109 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 168 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 48102 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 48043 Query: 169 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 228 ||||||||||||||| | ||| |||| |||||| ||| | |||| ||||| |||| || Sbjct: 48042 taaggcccctaaatggcagctaagtggcaaaggatgtgagaatgcagagacaaccagaag 47983 Query: 229 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 288 |||||| |||||||||||| |||| ||||||||||||||||||||||| | ||||| || Sbjct: 47982 gtttgcttagaagcagccatccttaaaagagtgcgtaatagctcactggtagagcgttct 47923 Query: 289 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 335 ||||| ||| ||||||||| |||||| |||||||||||||||||| Sbjct: 47922 tgcgccgaaaatgaacgggactaagctgcctgccgaagctgtgggat 47876 Score = 115 bits (58), Expect = 1e-22 Identities = 76/82 (92%) Strand = Plus / Plus Query: 399 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 458 ||||||||||||| ||||||||| ||||||||| || ||||||||||||||||||||||| Sbjct: 137740 gacgaagcggaagtgagaatgtcagcttgagtagcgcaaacattggtgagaatccaatgc 137799 Query: 459 cccgaaaacccaaggtttcctc 480 |||||||||| |||| |||||| Sbjct: 137800 cccgaaaacctaagggttcctc 137821 Score = 115 bits (58), Expect = 1e-22 Identities = 76/82 (92%) Strand = Plus / Minus Query: 399 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 458 ||||||||||||| ||||||||| ||||||||| || ||||||||||||||||||||||| Sbjct: 47804 gacgaagcggaagtgagaatgtcagcttgagtagcgcaaacattggtgagaatccaatgc 47745 Query: 459 cccgaaaacccaaggtttcctc 480 |||||||||| |||| |||||| Sbjct: 47744 cccgaaaacctaagggttcctc 47723 Score = 65.9 bits (33), Expect = 1e-07 Identities = 64/73 (87%), Gaps = 1/73 (1%) Strand = Plus / Plus Query: 3 tctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 62 ||||||||||||| |||||||||||||||||||| | | |||||||||||| ||||| Sbjct: 137354 tctaggggtaaag-cactgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaa 137412 Query: 63 ctctgaatactag 75 ||| ||||||||| Sbjct: 137413 ctcagaatactag 137425 Score = 65.9 bits (33), Expect = 1e-07 Identities = 64/73 (87%), Gaps = 1/73 (1%) Strand = Plus / Minus Query: 3 tctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 62 ||||||||||||| |||||||||||||||||||| | | |||||||||||| ||||| Sbjct: 48190 tctaggggtaaag-cactgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaa 48132 Query: 63 ctctgaatactag 75 ||| ||||||||| Sbjct: 48131 ctcagaatactag 48119
>gb|AY584522.1| Lyngbya aestuarii PCC 7419 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 224 bits (113), Expect = 2e-55 Identities = 183/205 (89%), Gaps = 1/205 (0%) Strand = Plus / Plus Query: 109 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 168 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 568 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 627 Query: 169 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 228 ||||| ||| |||| ||| || ||||| |||||||||||| ||||| ||||| ||||||| Sbjct: 628 taaggtccccaaataaccactaagtgagaaaggaggtgggagtgcacagacaaccaggag 687 Query: 229 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 288 ||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| | Sbjct: 688 gtttgcctagaagcagccatccttgaaagagtgcgtaatagctcactggtcaagcgctcc 747 Query: 289 tgcgctgaagatgaacggggctaag 313 | ||| ||| ||||||||||||||| Sbjct: 748 t-cgccgaaaatgaacggggctaag 771 Score = 99.6 bits (50), Expect = 8e-18 Identities = 63/66 (95%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 7 ggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 66 ||||||||| |||||||||||||||||||||| |||||||||||||||||| |||||||| Sbjct: 488 ggggtaaag-cactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactct 546 Query: 67 gaatac 72 |||||| Sbjct: 547 gaatac 552 Score = 75.8 bits (38), Expect = 1e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 399 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 458 ||||||||||||| ||||||||||||||||||| |||||| | ||||||||||| | | Sbjct: 857 gacgaagcggaagtgagaatgtcggcttgagtagcgaaaatttaggtgagaatcctaaac 916 Query: 459 cccgaaaacccaaggtttcctc 480 ||||||| || |||| |||||| Sbjct: 917 cccgaaaccctaagggttcctc 938
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 224 bits (113), Expect = 2e-55 Identities = 197/225 (87%) Strand = Plus / Plus Query: 109 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 168 |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||| Sbjct: 1023 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcatcagc 1082 Query: 169 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 228 |||||||||| |||| ||||| |||| |||||||||| | ||| | ||| ||||||| Sbjct: 1083 taaggcccctgaatggccgctaagtggcaaaggaggtgagaatgctgaaacaaccaggag 1142 Query: 229 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 288 |||||| ||||||||||||||||||||||||||||||||||||||||| | |||| || Sbjct: 1143 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtaaagcgttct 1202 Query: 289 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtggg 333 ||||| ||| ||||||||| ||||||| |||||||||||||||| Sbjct: 1203 tgcgccgaaaatgaacgggactaagcggcctgccgaagctgtggg 1247 Score = 131 bits (66), Expect = 2e-27 Identities = 78/82 (95%) Strand = Plus / Plus Query: 399 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 458 ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1432 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1491 Query: 459 cccgaaaacccaaggtttcctc 480 |||||||||| |||| |||||| Sbjct: 1492 cccgaaaacctaagggttcctc 1513 Score = 89.7 bits (45), Expect = 8e-15 Identities = 67/73 (91%), Gaps = 1/73 (1%) Strand = Plus / Plus Query: 3 tctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 62 ||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||| Sbjct: 934 tctaggggtaaag-cactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaa 992 Query: 63 ctctgaatactag 75 || ||||||||| Sbjct: 993 ctaagaatactag 1005
>gb|AY336134.1| Microcystis sp. MGccsy2 16S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; tRNA-Ile gene, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3320 Score = 222 bits (112), Expect = 8e-55 Identities = 196/224 (87%) Strand = Plus / Plus Query: 109 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 168 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 2481 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 2540 Query: 169 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 228 ||||| ||| |||||| || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 2541 taaggtccccaaatgataactaagtgagaaaggaggtgggagtgcattgacaaccaggag 2600 Query: 229 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 288 ||||||||||| ||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 2601 gtttgcctagaggcagcaatccttaaaagagtgcgtaatagctcactggtcaagcgctcc 2660 Query: 289 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 332 ||||| ||| ||||||||||||||| |||| |||||||||||| Sbjct: 2661 tgcgccgaaaatgaacggggctaagttatctaccgaagctgtgg 2704 Score = 65.9 bits (33), Expect = 1e-07 Identities = 63/73 (86%) Strand = Plus / Plus Query: 408 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 467 |||| |||||||||||||| |||| |||||| | ||||||||||| | |||||||| | Sbjct: 2777 gaagtgagaatgtcggcttaagtagcgaaaatgtgggtgagaatcccacaccccgaaacc 2836 Query: 468 ccaaggtttcctc 480 ||||||||||||| Sbjct: 2837 ccaaggtttcctc 2849 Score = 52.0 bits (26), Expect = 0.002 Identities = 57/66 (86%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 7 ggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 66 ||||||||| |||||||||| |||||||| | || |||||||| ||||||||||||| Sbjct: 2402 ggggtaaag-cactgtttcgccgcgggctgggagaccggtaccagggcgaggcaaactct 2460 Query: 67 gaatac 72 |||||| Sbjct: 2461 gaatac 2466
>gb|AY584513.1| Nodularia harveyana strain CCAP 1452/1 23S ribosomal RNA gene, partial sequence Length = 2387 Score = 222 bits (112), Expect = 8e-55 Identities = 200/228 (87%), Gaps = 1/228 (0%) Strand = Plus / Plus Query: 108 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 167 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 168 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 227 |||||| ||| |||| | ||| |||||||||||||||||| ||||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcattgctaagtgataaaggaggtgggagtgcagagacaactagga 685 Query: 228 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 287 ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 686 ggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactagtcaagcgctc 745 Query: 288 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 335 | ||| ||| |||||||||||||||| || | ||||||||||||||| Sbjct: 746 ct-cgccgaaaatgaacggggctaagcaatgtaccgaagctgtgggat 792 Score = 75.8 bits (38), Expect = 1e-10 Identities = 60/66 (90%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 7 ggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 66 ||||||||| |||||||||||||||||||| | || ||||||||||||||| ||||||| Sbjct: 487 ggggtaaag-cactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactca 545 Query: 67 gaatac 72 |||||| Sbjct: 546 gaatac 551 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 406 cggaagcgagaatgtcggcttgagta 431 |||||| ||||||||||||||||||| Sbjct: 868 cggaagtgagaatgtcggcttgagta 893
>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome Length = 3573470 Score = 222 bits (112), Expect = 8e-55 Identities = 196/224 (87%) Strand = Plus / Plus Query: 109 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 168 ||||| ||||| ||||||||||||||||||||||| ||||||||||||| || ||||||| Sbjct: 3327965 ccagtaagacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccagc 3328024 Query: 169 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 228 ||||| ||| |||| | | || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 3328025 taaggtccccaaatcatcactaagtgagaaaggaggtgggagtgcattgacaaccaggag 3328084 Query: 229 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 288 ||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 3328085 gtttgcctagaagcagcaatccttaaaagagtgcgtaatagctcactggtcaagcgctcc 3328144 Query: 289 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 332 ||||| ||| ||||||||||||||| ||| | |||||||||||| Sbjct: 3328145 tgcgccgaaaatgaacggggctaagtgatgtaccgaagctgtgg 3328188 Score = 222 bits (112), Expect = 8e-55 Identities = 196/224 (87%) Strand = Plus / Minus Query: 109 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 168 ||||| ||||| ||||||||||||||||||||||| ||||||||||||| || ||||||| Sbjct: 2450763 ccagtaagacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccagc 2450704 Query: 169 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 228 ||||| ||| |||| | | || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 2450703 taaggtccccaaatcatcactaagtgagaaaggaggtgggagtgcattgacaaccaggag 2450644 Query: 229 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 288 ||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 2450643 gtttgcctagaagcagcaatccttaaaagagtgcgtaatagctcactggtcaagcgctcc 2450584 Query: 289 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 332 ||||| ||| ||||||||||||||| ||| | |||||||||||| Sbjct: 2450583 tgcgccgaaaatgaacggggctaagtgatgtaccgaagctgtgg 2450540 Score = 73.8 bits (37), Expect = 5e-10 Identities = 64/73 (87%) Strand = Plus / Plus Query: 408 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 467 |||| ||||||||||||||||||| |||||| || ||||||||||| || |||||||| | Sbjct: 3328262 gaagtgagaatgtcggcttgagtagcgaaaatatgggtgagaatcccataccccgaaatc 3328321 Query: 468 ccaaggtttcctc 480 | |||| |||||| Sbjct: 3328322 ctaagggttcctc 3328334 Score = 73.8 bits (37), Expect = 5e-10 Identities = 64/73 (87%) Strand = Plus / Minus Query: 408 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 467 |||| ||||||||||||||||||| |||||| || ||||||||||| || |||||||| | Sbjct: 2450466 gaagtgagaatgtcggcttgagtagcgaaaatatgggtgagaatcccataccccgaaatc 2450407 Query: 468 ccaaggtttcctc 480 | |||| |||||| Sbjct: 2450406 ctaagggttcctc 2450394 Score = 60.0 bits (30), Expect = 7e-06 Identities = 58/66 (87%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 7 ggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 66 ||||||||| |||||||||| ||||||| ||| |||| |||||||| ||||||||||| Sbjct: 3327886 ggggtaaag-cactgtttcgctgcgggcggcgagagctgtaccaaagtgaggcaaactca 3327944 Query: 67 gaatac 72 |||||| Sbjct: 3327945 gaatac 3327950 Score = 60.0 bits (30), Expect = 7e-06 Identities = 58/66 (87%), Gaps = 1/66 (1%) Strand = Plus / Minus Query: 7 ggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 66 ||||||||| |||||||||| ||||||| ||| |||| |||||||| ||||||||||| Sbjct: 2450842 ggggtaaag-cactgtttcgctgcgggcggcgagagctgtaccaaagtgaggcaaactca 2450784 Query: 67 gaatac 72 |||||| Sbjct: 2450783 gaatac 2450778
>emb|AM084276.1| Compsopogon coeruleus chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 36.94 Length = 4420 Score = 222 bits (112), Expect = 8e-55 Identities = 308/371 (83%), Gaps = 3/371 (0%) Strand = Plus / Plus Query: 110 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 169 ||||||||| || |||||||||||||| ||| | ||||||||||||| || |||||| | Sbjct: 2640 cagtgagacagtgagggataagcttcattgtcaaaagggaaacagcccagaccaccagtt 2699 Query: 170 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 229 ||||||||||||| || |||| |||||||||||| |||| ||| |||||||| Sbjct: 2700 aaggcccctaaatagttactaagtggcaaaggaggtgggaatgcattaacaaccaggagg 2759 Query: 230 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 289 ||||| |||||||||| | |||||||||||||||||||||||||||| || || | | | Sbjct: 2760 tttgcttagaagcagcaatcctttaaagagtgcgtaatagctcactggtctagtgatcct 2819 Query: 290 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcg 349 |||| ||| ||||||||| ||||| | ||||||| ||||||||||| |||||||| Sbjct: 2820 gcgccgaaaatgaacgggactaagtaacttgccgaatctgtgggatgt--ttatgcatcg 2877 Query: 350 gtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgga 409 |||||||||||||| | |||||| |||||| |||||| || || ||| |||| || Sbjct: 2878 gtaggggagcgttctg-cttagattgaagcattaacgaaagtggatgtggacaaagcaga 2936 Query: 410 agcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccc 469 || ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| Sbjct: 2937 agtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccggaaacct 2996 Query: 470 aaggtttcctc 480 |||| |||||| Sbjct: 2997 aaggattcctc 3007 Score = 79.8 bits (40), Expect = 8e-12 Identities = 63/70 (90%), Gaps = 1/70 (1%) Strand = Plus / Plus Query: 5 taggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 64 ||||||||||| |||||||||||||||||||||| || ||||||||||||| ||||||| Sbjct: 2557 taggggtaaag-cactgtttcggtgcgggctgcgaaagyggtaccaaatcgatgcaaact 2615 Query: 65 ctgaatacta 74 |||||||| Sbjct: 2616 aagaatacta 2625
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 220 bits (111), Expect = 3e-54 Identities = 195/223 (87%) Strand = Plus / Plus Query: 110 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 169 |||||||||| ||||||||||||| |||||||||||||| |||||||| || ||||| || Sbjct: 2313248 cagtgagacggtgggggataagctccatcgtcgagaggggaacagcccagaccaccaact 2313307 Query: 170 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 229 |||||||| || | ||||||||| | |||||||||||||||| |||||| |||||||| Sbjct: 2313308 aaggcccccaagacatcgctcagtggttaaggaggtgggggtgcgaagacaaccaggagg 2313367 Query: 230 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 289 || || ||||||||||||||||||||| ||||||||| |||| |||| || ||||||||| Sbjct: 2313368 ttggcttagaagcagccaccctttaaacagtgcgtaacagctgactggtcaagcgccctt 2313427 Query: 290 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 332 |||| ||| ||||||||| ||||||||| ||||||| ||||| Sbjct: 2313428 gcgccgaaaatgaacgggactaagcgatgcgccgaagttgtgg 2313470 Score = 220 bits (111), Expect = 3e-54 Identities = 195/223 (87%) Strand = Plus / Minus Query: 110 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 169 |||||||||| ||||||||||||| |||||||||||||| |||||||| || ||||| || Sbjct: 1108599 cagtgagacggtgggggataagctccatcgtcgagaggggaacagcccagaccaccaact 1108540 Query: 170 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 229 |||||||| || | ||||||||| | |||||||||||||||| |||||| |||||||| Sbjct: 1108539 aaggcccccaagacatcgctcagtggttaaggaggtgggggtgcgaagacaaccaggagg 1108480 Query: 230 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 289 || || ||||||||||||||||||||| ||||||||| |||| |||| || ||||||||| Sbjct: 1108479 ttggcttagaagcagccaccctttaaacagtgcgtaacagctgactggtcaagcgccctt 1108420 Query: 290 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 332 |||| ||| ||||||||| ||||||||| ||||||| ||||| Sbjct: 1108419 gcgccgaaaatgaacgggactaagcgatgcgccgaagttgtgg 1108377 Score = 111 bits (56), Expect = 2e-21 Identities = 74/80 (92%) Strand = Plus / Plus Query: 399 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 458 ||||| ||||||| |||||||| |||||||||| || ||||||||||||||||||||||| Sbjct: 2313529 gacgaggcggaagtgagaatgttggcttgagtagcgcaaacattggtgagaatccaatgc 2313588 Query: 459 cccgaaaacccaaggtttcc 478 ||||||||||||||| |||| Sbjct: 2313589 cccgaaaacccaagggttcc 2313608 Score = 111 bits (56), Expect = 2e-21 Identities = 74/80 (92%) Strand = Plus / Minus Query: 399 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 458 ||||| ||||||| |||||||| |||||||||| || ||||||||||||||||||||||| Sbjct: 1108318 gacgaggcggaagtgagaatgttggcttgagtagcgcaaacattggtgagaatccaatgc 1108259 Query: 459 cccgaaaacccaaggtttcc 478 ||||||||||||||| |||| Sbjct: 1108258 cccgaaaacccaagggttcc 1108239
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 220 bits (111), Expect = 3e-54 Identities = 198/227 (87%) Strand = Plus / Plus Query: 109 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 168 |||||||||| ||||||||||||||||| ||| ||||||||||||||| ||||| |||| Sbjct: 933 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcatcagc 992 Query: 169 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 228 ||||||||| |||| ||||| |||| ||||||||||| | |||| | ||||||||||| Sbjct: 993 taaggccccagaatggccgctaagtggtaaaggaggtgagaatgcagaaacagccaggag 1052 Query: 229 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 288 |||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| || Sbjct: 1053 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtggagcgttct 1112 Query: 289 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 335 ||||| ||| || ||||| ||||||| ||||||||||| |||||| Sbjct: 1113 tgcgccgaaaattcacgggactaagcggcctgccgaagctatgggat 1159 Score = 123 bits (62), Expect = 6e-25 Identities = 74/78 (94%) Strand = Plus / Plus Query: 403 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 462 ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1236 aagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 1295 Query: 463 aaaacccaaggtttcctc 480 |||||| |||| |||||| Sbjct: 1296 aaaacctaagggttcctc 1313 Score = 65.9 bits (33), Expect = 1e-07 Identities = 64/73 (87%), Gaps = 1/73 (1%) Strand = Plus / Plus Query: 3 tctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 62 ||||||||||||| ||||||||||||||||||| || || |||||||||||| ||||| Sbjct: 844 tctaggggtaaag-cactgtttcggtgcgggctacgaaagtggtaccaaatcgtagcaaa 902 Query: 63 ctctgaatactag 75 || ||||||||| Sbjct: 903 ctaagaatactag 915 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 atcggtaggggagcgttccg 365 |||||||||||||||||||| Sbjct: 1179 atcggtaggggagcgttccg 1198
>gb|AY584520.1| Leptolyngbya sp. PCC 7410 23S ribosomal RNA gene, partial sequence Length = 2441 Score = 218 bits (110), Expect = 1e-53 Identities = 183/206 (88%), Gaps = 1/206 (0%) Strand = Plus / Plus Query: 108 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 167 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 625 Query: 168 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 227 |||||| ||| |||| || ||||||||||||||||||||| |||| ||||| |||||| Sbjct: 626 ctaaggtcccaaaataacacctcagtgataaaggaggtgggaatgcagagacaaccagga 685 Query: 228 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 287 |||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgttc 745 Query: 288 ttgcgctgaagatgaacggggctaag 313 | ||| ||| ||||||||||||||| Sbjct: 746 ct-cgccgaaaatgaacggggctaag 770 Score = 99.6 bits (50), Expect = 8e-18 Identities = 74/82 (90%) Strand = Plus / Plus Query: 399 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 458 |||||||| |||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 858 gacgaagcagaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 917 Query: 459 cccgaaaacccaaggtttcctc 480 || |||| || |||| |||||| Sbjct: 918 cctgaaatcctaagggttcctc 939 Score = 77.8 bits (39), Expect = 3e-11 Identities = 64/71 (90%), Gaps = 1/71 (1%) Strand = Plus / Plus Query: 7 ggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 66 ||||||||| ||||| |||||||||||||| | || ||||||||||||||| |||||||| Sbjct: 487 ggggtaaag-cactgattcggtgcgggctgggagaccggtaccaaatcgagtcaaactct 545 Query: 67 gaatactagat 77 |||||| |||| Sbjct: 546 gaataccagat 556
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 216 bits (109), Expect = 5e-53 Identities = 196/225 (87%) Strand = Plus / Minus Query: 108 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 167 |||||| ||||| ||||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 2333871 gccagtcagacggtgggggataagcttcatcgtcgagagggaaacagcccagaccaccag 2333812 Query: 168 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 227 |||||| ||| |||| | | || |||| ||||||||||||| ||| ||||| |||||| Sbjct: 2333811 ctaaggtccccaaatcatcactaagtggcaaaggaggtggggatgctcagacaaccagga 2333752 Query: 228 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 287 |||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 2333751 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgttc 2333692 Query: 288 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 332 ||||| ||| ||||||||| ||||| ||| | |||||||||||| Sbjct: 2333691 ctgcgccgaaaatgaacgggactaagtgatgtaccgaagctgtgg 2333647 Score = 113 bits (57), Expect = 5e-22 Identities = 75/81 (92%) Strand = Plus / Minus Query: 399 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 458 |||||||| |||| ||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 2333581 gacgaagcagaagtgagaatgccggcttgagtagcgaaaacattggtgagaatccaatgc 2333522 Query: 459 cccgaaaacccaaggtttcct 479 ||||||| ||||||| ||||| Sbjct: 2333521 cccgaaaccccaagggttcct 2333501 Score = 91.7 bits (46), Expect = 2e-15 Identities = 62/66 (93%), Gaps = 1/66 (1%) Strand = Plus / Minus Query: 7 ggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 66 ||||||||| ||||| |||||||||||||||| |||||||||||||||||| |||||||| Sbjct: 2333950 ggggtaaag-cactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactct 2333892 Query: 67 gaatac 72 |||||| Sbjct: 2333891 gaatac 2333886
>emb|AM084274.1| Glaucocystis nostochinearum cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 45.88 Length = 3065 Score = 216 bits (109), Expect = 5e-53 Identities = 190/217 (87%) Strand = Plus / Plus Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 ||||||||||||| ||| ||| ||||||||||||||| || |||||| ||||||||| || Sbjct: 1410 tgggggataagctccattgtcaagagggaaacagcccagaccaccagttaaggccccaaa 1469 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 || | ||| |||| ||||||||||||| |||| ||||| ||||||||||||||||||| Sbjct: 1470 ataatagctaagtggtaaaggaggtgggagtgcttagacaaccaggaggtttgcctagaa 1529 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 ||||| | |||||||||||||||||||||||||||| || ||||| ||||||| ||| || Sbjct: 1530 gcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgctcttgcgccgaaaat 1589 Query: 301 gaacggggctaagcgatctgccgaagctgtgggatgt 337 ||| ||| |||||| || ||||||||||||||||||| Sbjct: 1590 gaaagggactaagctatttgccgaagctgtgggatgt 1626 Score = 123 bits (62), Expect = 6e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 399 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 458 |||||| |||||| ||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 1726 gacgaaacggaagtgagaatgtcggcttgagtagcgaaaacattggtgaaaatccaatgc 1785 Query: 459 cccgaaaacccaaggtttcctc 480 ||||||||||||||| |||||| Sbjct: 1786 cccgaaaacccaagggttcctc 1807 Score = 91.7 bits (46), Expect = 2e-15 Identities = 65/70 (92%), Gaps = 1/70 (1%) Strand = Plus / Plus Query: 5 taggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 64 ||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 1316 taggggtaaag-cactgtttcggtgcgggctgcgagagcggtaccaaatcgatgcaaact 1374 Query: 65 ctgaatacta 74 |||||||| Sbjct: 1375 aagaatacta 1384
>gb|AY584509.1| Anabaena cylindrica strain UTEX 629 23S ribosomal RNA gene, partial sequence Length = 2389 Score = 214 bits (108), Expect = 2e-52 Identities = 195/224 (87%) Strand = Plus / Plus Query: 108 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 167 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 168 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 227 |||||| ||| |||| | |||| | |||||||||||||||| ||||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcagcgctaattgataaaggaggtgggagtgcatagacaactagga 685 Query: 228 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 287 ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 686 ggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactagtcaagcgctc 745 Query: 288 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 331 ||||| ||| |||||||||||| ||| || | ||||| ||||| Sbjct: 746 ctgcgccgaatatgaacggggctgagccatgtaccgaaactgtg 789 Score = 83.8 bits (42), Expect = 5e-13 Identities = 61/66 (92%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 7 ggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 66 ||||||||| |||||||||||||||||||| | || ||||||||||||||| |||||||| Sbjct: 487 ggggtaaag-cactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactct 545 Query: 67 gaatac 72 |||||| Sbjct: 546 gaatac 551 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 399 gacgaagcggaagcgagaatgtcggcttgagta 431 |||||| |||||| ||||||||||||||||||| Sbjct: 861 gacgaaacggaagtgagaatgtcggcttgagta 893
>gb|L42849.1|PEDCPRGOL Pedinomonas minor large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2632 Score = 214 bits (108), Expect = 2e-52 Identities = 192/220 (87%) Strand = Plus / Plus Query: 109 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 168 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || || |||| Sbjct: 957 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccatcagc 1016 Query: 169 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 228 ||||||||||||||| ||||| |||| |||||||||| | ||| | ||| ||||||| Sbjct: 1017 taaggcccctaaatggccgctaagtggcaaaggaggtgagaatgctgaaacaaccaggag 1076 Query: 229 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 288 |||||| ||||||||||||||||||||||||||||||||||||||||| | |||| || Sbjct: 1077 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtaaagcgttct 1136 Query: 289 tgcgctgaagatgaacggggctaagcgatctgccgaagct 328 ||||| ||| |||| |||| ||||||| ||||||||||| Sbjct: 1137 tgcgccgaaaatgatcgggactaagcggcctgccgaagct 1176 Score = 129 bits (65), Expect = 9e-27 Identities = 104/117 (88%) Strand = Plus / Plus Query: 349 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 408 ||||||||||||||||||| ||| |||||| | ||| |||| || || |||| |||| Sbjct: 1208 ggtaggggagcgttccgccaacgagtgaagcatcagcgtaagccggtgtggacggggcgg 1267 Query: 409 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 465 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1268 aagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 1324 Score = 83.8 bits (42), Expect = 5e-13 Identities = 67/74 (90%), Gaps = 1/74 (1%) Strand = Plus / Plus Query: 3 tctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 62 ||||||||||||| | |||||||||||||||||||| ||||||||||||||| |||||| Sbjct: 867 tctaggggtaaag-ctctgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaa 925 Query: 63 ctctgaatactaga 76 || |||||||||| Sbjct: 926 ctaagaatactaga 939
>gb|AF393605.1| Pedinomonas minor small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; chloroplast genes for chloroplast products Length = 5057 Score = 214 bits (108), Expect = 2e-52 Identities = 192/220 (87%) Strand = Plus / Plus Query: 109 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 168 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || || |||| Sbjct: 2839 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccatcagc 2898 Query: 169 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 228 ||||||||||||||| ||||| |||| |||||||||| | ||| | ||| ||||||| Sbjct: 2899 taaggcccctaaatggccgctaagtggcaaaggaggtgagaatgctgaaacaaccaggag 2958 Query: 229 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 288 |||||| ||||||||||||||||||||||||||||||||||||||||| | |||| || Sbjct: 2959 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtaaagcgttct 3018 Query: 289 tgcgctgaagatgaacggggctaagcgatctgccgaagct 328 ||||| ||| |||| |||| ||||||| ||||||||||| Sbjct: 3019 tgcgccgaaaatgatcgggactaagcggcctgccgaagct 3058 Score = 129 bits (65), Expect = 9e-27 Identities = 104/117 (88%) Strand = Plus / Plus Query: 349 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 408 ||||||||||||||||||| ||| |||||| | ||| |||| || || |||| |||| Sbjct: 3090 ggtaggggagcgttccgccaacgagtgaagcatcagcgtaagccggtgtggacggggcgg 3149 Query: 409 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 465 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3150 aagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 3206 Score = 83.8 bits (42), Expect = 5e-13 Identities = 67/74 (90%), Gaps = 1/74 (1%) Strand = Plus / Plus Query: 3 tctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 62 ||||||||||||| | |||||||||||||||||||| ||||||||||||||| |||||| Sbjct: 2749 tctaggggtaaag-ctctgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaa 2807 Query: 63 ctctgaatactaga 76 || |||||||||| Sbjct: 2808 ctaagaatactaga 2821
>gb|AY008341.1| Trichosarcina mucosa large subunit ribosomal RNA (rrnL) gene, partial sequence; and rrnL and putative site-specific DNA endonuclease (rrnL) genes, complete cds; chloroplast genes for chloroplast products Length = 4502 Score = 212 bits (107), Expect = 8e-52 Identities = 188/215 (87%) Strand = Plus / Plus Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 999 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 1058 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 ||| ||||| |||| |||||||||| |||||||||| |||| |||||||| ||||| Sbjct: 1059 atggccgctaagtggcaaaggaggtgaaaatgcaaagacaaccagaaggtttgcttagaa 1118 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 |||||||||||| ||||||||||||||||||||||| | ||||| |||||| ||| || Sbjct: 1119 gcagccacccttaaaagagtgcgtaatagctcactggtagagcgtttttgcgccgaaaat 1178 Query: 301 gaacggggctaagcgatctgccgaagctgtgggat 335 ||||||| ||||||| |||||||||||||||||| Sbjct: 1179 gaacgggactaagcggcctgccgaagctgtgggat 1213 Score = 105 bits (53), Expect = 1e-19 Identities = 74/81 (91%) Strand = Plus / Plus Query: 399 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 458 ||||| || |||| |||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1281 gacgacgcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgg 1340 Query: 459 cccgaaaacccaaggtttcct 479 |||||||||| |||| ||||| Sbjct: 1341 cccgaaaacctaagggttcct 1361 Score = 67.9 bits (34), Expect = 3e-08 Identities = 62/70 (88%), Gaps = 1/70 (1%) Strand = Plus / Plus Query: 5 taggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 64 ||||||||||| |||||||||||||||||||||| |||||||| |||||| ||||||| Sbjct: 901 taggggtaaag-cactgtttcggtgcgggctgcgaaagcggtactaaatcgtcgcaaact 959 Query: 65 ctgaatacta 74 |||||||| Sbjct: 960 aagaatacta 969
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 210 bits (106), Expect = 3e-51 Identities = 113/114 (99%), Gaps = 1/114 (0%) Strand = Plus / Minus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113 catctaggggtaaag-cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 55 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 54 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 1
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 210 bits (106), Expect = 3e-51 Identities = 128/134 (95%), Gaps = 1/134 (0%) Strand = Plus / Plus Query: 1 catctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 60 ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 47117 catctaggggtaaag-cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 47175 Query: 61 aactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacga 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 47176 aactctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgagacga 47235 Query: 121 tgggggataagctt 134 |||||||||||||| Sbjct: 47236 tgggggataagctt 47249
>gb|AY584521.1| Leptolyngbya sp. PCC 7104 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 208 bits (105), Expect = 1e-50 Identities = 196/225 (87%), Gaps = 1/225 (0%) Strand = Plus / Plus Query: 108 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 167 |||||| ||||| ||||||||||||||||||||||| ||||||||||||| || |||||| Sbjct: 566 gccagtcagacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccag 625 Query: 168 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 227 |||||| ||| ||||| ||| |||||||||||||||||| |||| ||||| |||||| Sbjct: 626 ctaaggtccccaaatggatgctaagtgataaaggaggtgggattgcagagacaaccagga 685 Query: 228 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 287 |||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgatc 745 Query: 288 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 332 | ||| ||| |||||||||||||||| || |||||||||||| Sbjct: 746 ct-cgccgaaaatgaacggggctaagcatcctaccgaagctgtgg 789 Score = 83.8 bits (42), Expect = 5e-13 Identities = 61/66 (92%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 7 ggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 66 ||||||||| ||||| |||||||||||||||| |||||||||||||||||| ||||||| Sbjct: 487 ggggtaaag-cactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactca 545 Query: 67 gaatac 72 |||||| Sbjct: 546 gaatac 551 Score = 58.0 bits (29), Expect = 3e-05 Identities = 62/73 (84%) Strand = Plus / Plus Query: 408 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 467 |||| |||||||||||||| |||| |||||| | ||||||||||| | |||||||| | Sbjct: 866 gaagtgagaatgtcggcttaagtagcgaaaatgtaggtgagaatcctacaccccgaaatc 925 Query: 468 ccaaggtttcctc 480 |||||| |||||| Sbjct: 926 ccaagggttcctc 938
>gb|AY584517.1| Gloeobacter violaceus strain PCC 7421 23S ribosomal RNA gene, partial sequence Length = 2340 Score = 208 bits (105), Expect = 1e-50 Identities = 180/205 (87%) Strand = Plus / Plus Query: 110 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 169 ||||||||| ||||||||||||| ||| ||||||||||||||||||| || |||||||| Sbjct: 567 cagtgagactgtgggggataagctccatggtcgagagggaaacagcccagaccaccagct 626 Query: 170 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 229 |||| ||| |||| |||||||||| ||||||||||| |||| ||||| |||||||| Sbjct: 627 aaggtccccaaattgtagctcagtgattaaggaggtgggattgcacagacaaccaggagg 686 Query: 230 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 289 ||||||||||||||||||||||| ||||||||||||||||||||||| || |||| | | Sbjct: 687 tttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgatcct 746 Query: 290 gcgctgaagatgaacggggctaagc 314 |||| ||| |||||||||||||||| Sbjct: 747 gcgccgaaaatgaacggggctaagc 771 Score = 99.6 bits (50), Expect = 8e-18 Identities = 74/82 (90%) Strand = Plus / Plus Query: 399 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 458 ||||| ||||||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 847 gacgaggcggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 906 Query: 459 cccgaaaacccaaggtttcctc 480 |||||| || |||| |||||| Sbjct: 907 tccgaaaccctaagggttcctc 928 Score = 79.8 bits (40), Expect = 8e-12 Identities = 52/56 (92%) Strand = Plus / Plus Query: 17 cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 72 ||||| |||||||||||||||| |||||||||||||||||| ||||||| |||||| Sbjct: 494 cactgattcggtgcgggctgcgagagcggtaccaaatcgagacaaactccgaatac 549
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 208 bits (105), Expect = 1e-50 Identities = 196/225 (87%), Gaps = 1/225 (0%) Strand = Plus / Plus Query: 108 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 167 |||||| ||||| || |||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 566 gccagtaagacggtgagggataagctccatcgtcgagagggaaacagcccagaccaccag 625 Query: 168 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 227 |||||| ||| ||||| ||| |||||||||||||||||| |||| ||||| |||||| Sbjct: 626 ctaaggtcccaaaatggatgctaagtgataaaggaggtgggattgcagagacaaccagga 685 Query: 228 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 287 |||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgatc 745 Query: 288 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 332 | ||| ||| |||||||||||||||| ||| |||||||||||| Sbjct: 746 ct-cgccgaaaatgaacggggctaagcattctaccgaagctgtgg 789 Score = 91.7 bits (46), Expect = 2e-15 Identities = 62/66 (93%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 7 ggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 66 ||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||| Sbjct: 487 ggggtaaag-cactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactca 545 Query: 67 gaatac 72 |||||| Sbjct: 546 gaatac 551 Score = 75.8 bits (38), Expect = 1e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 399 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 458 ||||| || |||| ||||||||||||||||||| ||||||||| ||||||||| |||| Sbjct: 855 gacgaggcagaagtgagaatgtcggcttgagtagcgaaaacatgtgtgagaatcacatgc 914 Query: 459 cccgaaaacccaaggtttcctc 480 ||||||| || |||| |||||| Sbjct: 915 cccgaaaccctaagggttcctc 936
>gb|AY584507.1| Euhalothece sp. BAA001 23S ribosomal RNA gene, partial sequence Length = 2441 Score = 206 bits (104), Expect = 5e-50 Identities = 195/224 (87%), Gaps = 1/224 (0%) Strand = Plus / Plus Query: 109 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 168 ||||| ||||| ||||||||||||||||||||||| ||||||||||||| || ||||||| Sbjct: 568 ccagtaagacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccagc 627 Query: 169 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 228 ||||| ||| |||| | | || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 628 taaggtccccaaatcatcactaagtgagaaaggaggtgggagtgcattgacaaccaggag 687 Query: 229 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 288 ||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 688 gtttgcctagaagcagcaatccttaaaagagtgcgtaatagctcactggtcaagcgctcc 747 Query: 289 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 332 | ||| ||| ||||||||||||||| ||| | |||||||||||| Sbjct: 748 t-cgccgaaaatgaacggggctaagtgatgtaccgaagctgtgg 790 Score = 73.8 bits (37), Expect = 5e-10 Identities = 64/73 (87%) Strand = Plus / Plus Query: 408 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 467 |||| ||||||||||||||||||| |||||| || ||||||||||| || |||||||| | Sbjct: 864 gaagtgagaatgtcggcttgagtagcgaaaatatgggtgagaatcccataccccgaaatc 923 Query: 468 ccaaggtttcctc 480 | |||| |||||| Sbjct: 924 ctaagggttcctc 936 Score = 60.0 bits (30), Expect = 7e-06 Identities = 58/66 (87%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 7 ggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 66 ||||||||| |||||||||| ||||||| ||| |||| |||||||| ||||||||||| Sbjct: 489 ggggtaaag-cactgtttcgctgcgggcggcgagagctgtaccaaagtgaggcaaactca 547 Query: 67 gaatac 72 |||||| Sbjct: 548 gaatac 553
>gb|L44126.1|SFFCPRGOL Scherffelia dubia chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3334 Score = 206 bits (104), Expect = 5e-50 Identities = 152/168 (90%) Strand = Plus / Plus Query: 109 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 168 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 965 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 1024 Query: 169 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 228 |||||||||||||| || ||| |||| |||||||||| ||| ||||| ||||||| Sbjct: 1025 taaggcccctaaataacggctaagtgggaaaggaggtgaaaatgctcagacaaccaggag 1084 Query: 229 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 276 |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1085 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactg 1132 Score = 105 bits (53), Expect = 1e-19 Identities = 74/81 (91%) Strand = Plus / Plus Query: 399 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 458 ||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 1261 gacgaagcggaagtgagaatgtcggtttgagtaacgaaaacatcggtgagaatcctttgc 1320 Query: 459 cccgaaaacccaaggtttcct 479 |||||||||| |||| ||||| Sbjct: 1321 cccgaaaacctaagggttcct 1341 Score = 56.0 bits (28), Expect = 1e-04 Identities = 59/68 (86%), Gaps = 1/68 (1%) Strand = Plus / Plus Query: 6 aggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 65 |||||||||| |||||||||| ||||||||| | ||||||||||||||| ||||||| Sbjct: 880 aggggtaaag-cactgtttcgatgcgggctgtgaaagcggtaccaaatcgttgcaaacta 938 Query: 66 tgaatact 73 ||||||| Sbjct: 939 agaatact 946
>gb|AF393609.1| Scherffelia dubia small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and putative site-specific DNA endonuclease (orf167) gene, complete cds; chloroplast genes for chloroplast products Length = 5476 Score = 206 bits (104), Expect = 5e-50 Identities = 152/168 (90%) Strand = Plus / Plus Query: 109 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 168 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 2703 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 2762 Query: 169 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 228 |||||||||||||| || ||| |||| |||||||||| ||| ||||| ||||||| Sbjct: 2763 taaggcccctaaataacggctaagtgggaaaggaggtgaaaatgctcagacaaccaggag 2822 Query: 229 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 276 |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 2823 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactg 2870 Score = 105 bits (53), Expect = 1e-19 Identities = 74/81 (91%) Strand = Plus / Plus Query: 399 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 458 ||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 2999 gacgaagcggaagtgagaatgtcggtttgagtaacgaaaacatcggtgagaatcctttgc 3058 Query: 459 cccgaaaacccaaggtttcct 479 |||||||||| |||| ||||| Sbjct: 3059 cccgaaaacctaagggttcct 3079 Score = 56.0 bits (28), Expect = 1e-04 Identities = 59/68 (86%), Gaps = 1/68 (1%) Strand = Plus / Plus Query: 6 aggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 65 |||||||||| |||||||||| ||||||||| | ||||||||||||||| ||||||| Sbjct: 2618 aggggtaaag-cactgtttcgatgcgggctgtgaaagcggtaccaaatcgttgcaaacta 2676 Query: 66 tgaatact 73 ||||||| Sbjct: 2677 agaatact 2684
>gb|AY584516.1| Lyngbya majuscula str. CCAP 1446/4 23S ribosomal RNA gene, partial sequence Length = 2381 Score = 204 bits (103), Expect = 2e-49 Identities = 197/227 (86%), Gaps = 1/227 (0%) Strand = Plus / Plus Query: 109 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 168 ||||| ||||| || |||||||||| ||||||||||||||||||||||| || | ||||| Sbjct: 565 ccagtaagacggtgagggataagctccatcgtcgagagggaaacagcccagaccgccagc 624 Query: 169 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 228 ||||| ||| |||| | ||| |||||||||||||||||| ||||| ||||| ||||||| Sbjct: 625 taaggtccccaaataattgctaagtgataaaggaggtgggagtgcatagacaaccaggag 684 Query: 229 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 288 ||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 685 gtttgcctagaagcagcaatccttgaaagagtgcgtaatagctcactggtcaagcgctcc 744 Query: 289 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 335 | ||| ||| |||||||||||||||| || | ||||||||| ||||| Sbjct: 745 t-cgccgaaaatgaacggggctaagcaatttaccgaagctgcgggat 790 Score = 63.9 bits (32), Expect = 4e-07 Identities = 60/68 (88%), Gaps = 1/68 (1%) Strand = Plus / Plus Query: 6 aggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 65 |||||||||| |||||||||| ||||||||||| ||||||||||||| ||| |||||| Sbjct: 485 aggggtaaag-cactgtttcgctgcgggctgcgagagcggtaccaaagtgagacaaacta 543 Query: 66 tgaatact 73 ||||||| Sbjct: 544 agaatact 551 Score = 50.1 bits (25), Expect = 0.007 Identities = 61/73 (83%) Strand = Plus / Plus Query: 408 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 467 |||| |||||||||||||| |||| |||||| || ||||||||| || |||||||| | Sbjct: 870 gaagtgagaatgtcggcttaagtagcgaaaatatgtgtgagaatcacataccccgaaacc 929 Query: 468 ccaaggtttcctc 480 | |||| |||||| Sbjct: 930 ctaagggttcctc 942
>gb|AY584515.1| Oscillatoria sp. strain CCAP 1459/13 23S ribosomal RNA gene, partial sequence Length = 2381 Score = 204 bits (103), Expect = 2e-49 Identities = 197/227 (86%), Gaps = 1/227 (0%) Strand = Plus / Plus Query: 109 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 168 ||||| ||||| || |||||||||| ||||||||||||||||||||||| || | ||||| Sbjct: 565 ccagtaagacggtgagggataagctccatcgtcgagagggaaacagcccagaccgccagc 624 Query: 169 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 228 ||||| ||| |||| | ||| |||||||||||||||||| ||||| ||||| ||||||| Sbjct: 625 taaggtccccaaataattgctaagtgataaaggaggtgggagtgcatagacaaccaggag 684 Query: 229 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 288 ||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 685 gtttgcctagaagcagcaatccttgaaagagtgcgtaatagctcactggtcaagcgctcc 744 Query: 289 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 335 | ||| ||| |||||||||||||||| || | ||||||||| ||||| Sbjct: 745 t-cgccgaaaatgaacggggctaagcaatttaccgaagctgcgggat 790 Score = 63.9 bits (32), Expect = 4e-07 Identities = 60/68 (88%), Gaps = 1/68 (1%) Strand = Plus / Plus Query: 6 aggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 65 |||||||||| |||||||||| ||||||||||| ||||||||||||| ||| |||||| Sbjct: 485 aggggtaaag-cactgtttcgctgcgggctgcgagagcggtaccaaagtgagacaaacta 543 Query: 66 tgaatact 73 ||||||| Sbjct: 544 agaatact 551 Score = 50.1 bits (25), Expect = 0.007 Identities = 61/73 (83%) Strand = Plus / Plus Query: 408 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 467 |||| |||||||||||||| |||| |||||| || ||||||||| || |||||||| | Sbjct: 870 gaagtgagaatgtcggcttaagtagcgaaaatatgtgtgagaatcacataccccgaaacc 929 Query: 468 ccaaggtttcctc 480 | |||| |||||| Sbjct: 930 ctaagggttcctc 942
>gb|L43359.1|PZTCPRRNL Pterosperma cristatum large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 3371 Score = 202 bits (102), Expect = 8e-49 Identities = 192/222 (86%) Strand = Plus / Plus Query: 110 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 169 ||||||||| |||||||| ||||||||| ||||||||||||||||||| ||||||||| | Sbjct: 959 cagtgagactatgggggagaagcttcatagtcgagagggaaacagcccagatcaccagtt 1018 Query: 170 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 229 |||||||| ||| || ||| |||| |||||||||||| ||| |||||| |||||||| Sbjct: 1019 aaggccccaaaacgatagctaagtggaaaaggaggtgggcatgcgaagacaaccaggagg 1078 Query: 230 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 289 |||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | | Sbjct: 1079 tttgcctagaagcagccatccttgaaagagtgcgtaatagctcactggtcaagcgttcct 1138 Query: 290 gcgctgaagatgaacggggctaagcgatctgccgaagctgtg 331 |||| ||| ||||| ||| ||||| |||||||||| ||||| Sbjct: 1139 gcgccgaaaatgaatgggactaagttatctgccgaaactgtg 1180 Score = 71.9 bits (36), Expect = 2e-09 Identities = 61/68 (89%), Gaps = 1/68 (1%) Strand = Plus / Plus Query: 6 aggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 65 |||||||||| |||||||||||||||||||||| || |||||||||||| |||||||| Sbjct: 874 aggggtaaag-cactgtttcggtgcgggctgcgaaagtggtaccaaatcgtagcaaactc 932 Query: 66 tgaatact 73 ||||||| Sbjct: 933 agaatact 940 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 408 gaagcgagaatgtcggcttgagtaacg 434 |||| |||||||||||||||||||||| Sbjct: 1259 gaagtgagaatgtcggcttgagtaacg 1285
>gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome Length = 135599 Score = 202 bits (102), Expect = 8e-49 Identities = 198/230 (86%) Strand = Plus / Minus Query: 108 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 167 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 114483 gccagttagacagtgggggataagctccattgtcaagagggaaacagcccagaccaccag 114424 Query: 168 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 227 |||||||||||||| ||| |||| |||||||||||| |||| ||||| |||||| Sbjct: 114423 ttaaggcccctaaatagtagctaagtggcaaaggaggtgggagtgcttagacaaccagga 114364 Query: 228 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 287 |||||||||||||||||| | |||||||||||||||||||||||||||| || ||||| | Sbjct: 114363 ggtttgcctagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgctc 114304 Query: 288 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 337 ||||| ||| ||||| ||| |||||| || ||||||||||||||||||| Sbjct: 114303 ctgcgccgaaaatgaatgggactaagctatttgccgaagctgtgggatgt 114254 Score = 202 bits (102), Expect = 8e-49 Identities = 198/230 (86%) Strand = Plus / Plus Query: 108 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 167 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 3034 gccagttagacagtgggggataagctccattgtcaagagggaaacagcccagaccaccag 3093 Query: 168 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 227 |||||||||||||| ||| |||| |||||||||||| |||| ||||| |||||| Sbjct: 3094 ttaaggcccctaaatagtagctaagtggcaaaggaggtgggagtgcttagacaaccagga 3153 Query: 228 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 287 |||||||||||||||||| | |||||||||||||||||||||||||||| || ||||| | Sbjct: 3154 ggtttgcctagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgctc 3213 Query: 288 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 337 ||||| ||| ||||| ||| |||||| || ||||||||||||||||||| Sbjct: 3214 ctgcgccgaaaatgaatgggactaagctatttgccgaagctgtgggatgt 3263 Score = 115 bits (58), Expect = 1e-22 Identities = 68/70 (97%), Gaps = 1/70 (1%) Strand = Plus / Minus Query: 5 taggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 64 ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 114564 taggggtaaag-cactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaact 114506 Query: 65 ctgaatacta 74 |||||||||| Sbjct: 114505 ctgaatacta 114496 Score = 115 bits (58), Expect = 1e-22 Identities = 70/74 (94%) Strand = Plus / Minus Query: 406 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 465 |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 114176 cggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaa 114117 Query: 466 acccaaggtttcct 479 ||| |||| ||||| Sbjct: 114116 acctaagggttcct 114103 Score = 115 bits (58), Expect = 1e-22 Identities = 70/74 (94%) Strand = Plus / Plus Query: 406 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 465 |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 3341 cggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaa 3400 Query: 466 acccaaggtttcct 479 ||| |||| ||||| Sbjct: 3401 acctaagggttcct 3414 Score = 115 bits (58), Expect = 1e-22 Identities = 68/70 (97%), Gaps = 1/70 (1%) Strand = Plus / Plus Query: 5 taggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 64 ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 2953 taggggtaaag-cactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaact 3011 Query: 65 ctgaatacta 74 |||||||||| Sbjct: 3012 ctgaatacta 3021 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 345 catcggtaggggagcgttccg 365 ||||||||||||||||||||| Sbjct: 114237 catcggtaggggagcgttccg 114217 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 345 catcggtaggggagcgttccg 365 ||||||||||||||||||||| Sbjct: 3280 catcggtaggggagcgttccg 3300
>gb|AY584525.1| Plectonema terebrans strain CCAP 1463-4 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 200 bits (101), Expect = 3e-48 Identities = 195/225 (86%), Gaps = 1/225 (0%) Strand = Plus / Plus Query: 108 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 167 |||||| ||||| ||||||||||||||||||||||| ||||||||||||| || |||||| Sbjct: 566 gccagtcagacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccag 625 Query: 168 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 227 |||||| ||||||||| ||| |||| ||||||||||||| |||| ||||| |||||| Sbjct: 626 ctaaggtccctaaatggatgctaagtggtaaaggaggtgggattgcagagacaaccagga 685 Query: 228 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 287 |||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgatc 745 Query: 288 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 332 | ||| ||| ||||||||| |||||| || |||||||||||| Sbjct: 746 ct-cgccgaaaatgaacgggactaagcatcctaccgaagctgtgg 789 Score = 105 bits (53), Expect = 1e-19 Identities = 68/73 (93%) Strand = Plus / Plus Query: 408 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 467 |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 866 gaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaacc 925 Query: 468 ccaaggtttcctc 480 | |||| |||||| Sbjct: 926 ctaagggttcctc 938 Score = 83.8 bits (42), Expect = 5e-13 Identities = 61/66 (92%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 7 ggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 66 ||||||||| ||||| |||||||||||||||| |||||||||||||||||| ||||||| Sbjct: 487 ggggtaaag-cactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactca 545 Query: 67 gaatac 72 |||||| Sbjct: 546 gaatac 551
>gb|AC007729.3| Arabidopsis thaliana chromosome 2 BAC T18C6 genomic sequence, complete sequence Length = 114068 Score = 198 bits (100), Expect = 1e-47 Identities = 128/136 (94%), Gaps = 1/136 (0%) Strand = Plus / Minus Query: 142 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 201 |||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||| Sbjct: 57141 gagagggaaacagcccggatcaccagctaaggcccccaaatggccgctcagttataaagg 57082 Query: 202 aggtgggggtgcaaagacagcc-aggaggtttgcctagaagcagccaccctttaaagagt 260 |||| |||||||| |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 57081 aggtaggggtgcagagacagccaaggaggtttgcctagaagcagccacccttgaaagagc 57022 Query: 261 gcgtaatagctcactg 276 |||||||||||||||| Sbjct: 57021 gcgtaatagctcactg 57006
>gb|DQ174248.1| Phaeodactylum tricornutum 16S ribosomal RNA, tRNA-Ile, tRNA-Ala, 23S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast Length = 5026 Score = 196 bits (99), Expect = 5e-47 Identities = 217/255 (85%), Gaps = 1/255 (0%) Strand = Plus / Plus Query: 110 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 169 ||||||||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| | Sbjct: 2691 cagtgagactgtgggggataagctccattgtcaagagggaaacagcccagagcaccagtt 2750 Query: 170 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 229 ||||||||||||| | ||| |||||||||||||||||| ||||| ||||| ||||||| Sbjct: 2751 aaggcccctaaataattgctaagtgataaaggaggtgggagtgcatagacaatcaggagg 2810 Query: 230 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 289 ||||| |||||||||| | |||||||||||||||||||||||||||||||||| | | Sbjct: 2811 tttgcttagaagcagcaatcctttaaagagtgcgtaatagctcactgatcgagtaaacct 2870 Query: 290 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt-caaaatgcatc 348 |||| ||| ||| ||||| ||||| || ||||||| ||||| ||| | ||||| ||| Sbjct: 2871 gcgccgaaaatgtacgggactaagtaatttgccgaaactgtgcgatatataaaatatatc 2930 Query: 349 ggtaggggagcgttc 363 ||||||||||||||| Sbjct: 2931 ggtaggggagcgttc 2945 Score = 115 bits (58), Expect = 1e-22 Identities = 76/82 (92%) Strand = Plus / Plus Query: 399 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 458 |||||||| |||| |||||||||||||||||||||||||| || ||||||||||| || | Sbjct: 2981 gacgaagcagaagtgagaatgtcggcttgagtaacgaaaatataggtgagaatcctatac 3040 Query: 459 cccgaaaacccaaggtttcctc 480 |||||||||||||||||||||| Sbjct: 3041 cccgaaaacccaaggtttcctc 3062
>gb|AY835431.1| Pseudendoclonium akinetum chloroplast, complete genome Length = 195867 Score = 196 bits (99), Expect = 5e-47 Identities = 186/215 (86%) Strand = Plus / Plus Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 192830 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 192889 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 ||| ||||| |||| |||||||||| |||| ||||| |||| |||||||| ||||| Sbjct: 192890 atggccgctaagtggcaaaggaggtgaaaatgcagagacaaccagaaggtttgcttagaa 192949 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 ||||||| |||| ||||||||||||||||||||||| | ||||| |||||| ||| || Sbjct: 192950 gcagccatccttaaaagagtgcgtaatagctcactggtagagcgtttttgcgccgaaaat 193009 Query: 301 gaacggggctaagcgatctgccgaagctgtgggat 335 ||||||| ||||||| |||||||||||||||||| Sbjct: 193010 gaacgggactaagcggcctgccgaagctgtgggat 193044 Score = 196 bits (99), Expect = 5e-47 Identities = 186/215 (86%) Strand = Plus / Minus Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 143952 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 143893 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 ||| ||||| |||| |||||||||| |||| ||||| |||| |||||||| ||||| Sbjct: 143892 atggccgctaagtggcaaaggaggtgaaaatgcagagacaaccagaaggtttgcttagaa 143833 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 ||||||| |||| ||||||||||||||||||||||| | ||||| |||||| ||| || Sbjct: 143832 gcagccatccttaaaagagtgcgtaatagctcactggtagagcgtttttgcgccgaaaat 143773 Query: 301 gaacggggctaagcgatctgccgaagctgtgggat 335 ||||||| ||||||| |||||||||||||||||| Sbjct: 143772 gaacgggactaagcggcctgccgaagctgtgggat 143738 Score = 115 bits (58), Expect = 1e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 394 gggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcc 453 |||| ||||| ||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 193107 gggttgacgacgcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatcc 193166 Query: 454 aatgccccgaaaacccaaggtttcct 479 |||| |||||||||| |||| ||||| Sbjct: 193167 aatgtcccgaaaacctaagggttcct 193192 Score = 115 bits (58), Expect = 1e-22 Identities = 79/86 (91%) Strand = Plus / Minus Query: 394 gggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcc 453 |||| ||||| ||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 143675 gggttgacgacgcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatcc 143616 Query: 454 aatgccccgaaaacccaaggtttcct 479 |||| |||||||||| |||| ||||| Sbjct: 143615 aatgtcccgaaaacctaagggttcct 143590 Score = 67.9 bits (34), Expect = 3e-08 Identities = 62/70 (88%), Gaps = 1/70 (1%) Strand = Plus / Plus Query: 5 taggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 64 ||||||||||| |||||||||||||||||||||| |||||||| |||||| ||||||| Sbjct: 192732 taggggtaaag-cactgtttcggtgcgggctgcgaaagcggtactaaatcgtcgcaaact 192790 Query: 65 ctgaatacta 74 |||||||| Sbjct: 192791 aagaatacta 192800 Score = 67.9 bits (34), Expect = 3e-08 Identities = 62/70 (88%), Gaps = 1/70 (1%) Strand = Plus / Minus Query: 5 taggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 64 ||||||||||| |||||||||||||||||||||| |||||||| |||||| ||||||| Sbjct: 144050 taggggtaaag-cactgtttcggtgcgggctgcgaaagcggtactaaatcgtcgcaaact 143992 Query: 65 ctgaatacta 74 |||||||| Sbjct: 143991 aagaatacta 143982
>gb|L43541.1|PDWCPRRNL Pedinomonas tuberculata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3875 Score = 196 bits (99), Expect = 5e-47 Identities = 195/227 (85%) Strand = Plus / Plus Query: 108 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 167 |||||||||||| |||| |||||| ||||||||| ||||||||||||||| || || ||| Sbjct: 969 gccagtgagacggtgggcgataaggttcatcgtcaagagggaaacagcccagaccatcag 1028 Query: 168 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 227 |||||||||| ||||| ||||| |||| |||||||||| | ||| | ||| |||||| Sbjct: 1029 ctaaggccccaaaatggccgctaagtggcaaaggaggtgagaatgctgaaacaaccagga 1088 Query: 228 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 287 ||||||| |||||||||||| |||||||||||||||||||||||||||| | |||| | Sbjct: 1089 ggtttgcttagaagcagccatcctttaaagagtgcgtaatagctcactggtaaagcgttc 1148 Query: 288 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 334 |||||| ||| |||| |||| ||||||| ||||||||||||||||| Sbjct: 1149 ttgcgccgaaaatgatcgggactaagcggcctgccgaagctgtggga 1195 Score = 113 bits (57), Expect = 5e-22 Identities = 60/61 (98%) Strand = Plus / Plus Query: 405 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 464 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1275 gcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 1334 Query: 465 a 465 | Sbjct: 1335 a 1335 Score = 75.8 bits (38), Expect = 1e-10 Identities = 66/74 (89%), Gaps = 1/74 (1%) Strand = Plus / Plus Query: 3 tctaggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 62 ||||||||||||| | |||||||| ||||||||||| ||||||||||||||| |||||| Sbjct: 882 tctaggggtaaag-ctctgtttcgatgcgggctgcgaaagcggtaccaaatcgtggcaaa 940 Query: 63 ctctgaatactaga 76 || |||||||||| Sbjct: 941 ctaagaatactaga 954 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 347 tcggtaggggagcgttccgcc 367 ||||||||||||||||||||| Sbjct: 1217 tcggtaggggagcgttccgcc 1237
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 194 bits (98), Expect = 2e-46 Identities = 179/206 (86%) Strand = Plus / Plus Query: 108 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 167 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 1659443 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 1659502 Query: 168 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 227 |||||| || |||| | || |||||||||||||||||| ||||| ||||| |||||| Sbjct: 1659503 ctaaggtcctcaaatcagaacttagtgataaaggaggtgggagtgcatagacaaccagga 1659562 Query: 228 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 287 |||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| | Sbjct: 1659563 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgctc 1659622 Query: 288 ttgcgctgaagatgaacggggctaag 313 ||||| ||| ||||||||||||||| Sbjct: 1659623 ctgcgccgaaaatgaacggggctaag 1659648 Score = 194 bits (98), Expect = 2e-46 Identities = 179/206 (86%) Strand = Plus / Minus Query: 108 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 167 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 1049301 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 1049242 Query: 168 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 227 |||||| || |||| | || |||||||||||||||||| ||||| ||||| |||||| Sbjct: 1049241 ctaaggtcctcaaatcagaacttagtgataaaggaggtgggagtgcatagacaaccagga 1049182 Query: 228 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 287 |||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| | Sbjct: 1049181 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgctc 1049122 Query: 288 ttgcgctgaagatgaacggggctaag 313 ||||| ||| ||||||||||||||| Sbjct: 1049121 ctgcgccgaaaatgaacggggctaag 1049096 Score = 107 bits (54), Expect = 3e-20 Identities = 75/82 (91%) Strand = Plus / Plus Query: 399 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 458 |||||| |||||| ||||||||||||||||||| ||||||||| ||||||||||| |||| Sbjct: 1659733 gacgaaacggaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgc 1659792 Query: 459 cccgaaaacccaaggtttcctc 480 ||||||| ||||||| |||||| Sbjct: 1659793 cccgaaatcccaagggttcctc 1659814 Score = 107 bits (54), Expect = 3e-20 Identities = 75/82 (91%) Strand = Plus / Minus Query: 399 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 458 |||||| |||||| ||||||||||||||||||| ||||||||| ||||||||||| |||| Sbjct: 1049011 gacgaaacggaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgc 1048952 Query: 459 cccgaaaacccaaggtttcctc 480 ||||||| ||||||| |||||| Sbjct: 1048951 cccgaaatcccaagggttcctc 1048930 Score = 79.8 bits (40), Expect = 8e-12 Identities = 52/56 (92%) Strand = Plus / Plus Query: 17 cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 72 ||||| |||||||||||||||| |||||||||||||||||| ||||||| |||||| Sbjct: 1659373 cactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccgaatac 1659428 Score = 79.8 bits (40), Expect = 8e-12 Identities = 52/56 (92%) Strand = Plus / Minus Query: 17 cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 72 ||||| |||||||||||||||| |||||||||||||||||| ||||||| |||||| Sbjct: 1049371 cactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccgaatac 1049316
>gb|L42992.1|TESCPRGOL Tetraselmis carteriiformis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2552 Score = 194 bits (98), Expect = 2e-46 Identities = 218/258 (84%) Strand = Plus / Plus Query: 109 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 168 |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||| Sbjct: 935 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcatcagc 994 Query: 169 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 228 |||||||||||||| | || |||| |||||||||| | ||| ||||| |||| || Sbjct: 995 taaggcccctaaataatttctaagtgggaaaggaggtgagaatgctgagacaaccagaag 1054 Query: 229 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 288 |||||| ||||||||||||||||||||||||||||||||||||||||| | |||| | Sbjct: 1055 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggttaagcgtttt 1114 Query: 289 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 348 ||||| ||| ||| |||| ||||| || ||||||||||||||||| || || ||| Sbjct: 1115 tgcgccgaaaatgctcgggactaagaaatttgccgaagctgtgggatatcgtaagatatc 1174 Query: 349 ggtaggggagcgttccgc 366 |||||||||||||||||| Sbjct: 1175 ggtaggggagcgttccgc 1192 Score = 129 bits (65), Expect = 9e-27 Identities = 77/81 (95%) Strand = Plus / Plus Query: 399 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 458 ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1225 gacgaagcggaagtgagaatgtcggtttgagtaacgaaaacattggtgagaatccaatgc 1284 Query: 459 cccgaaaacccaaggtttcct 479 |||||||||| |||| ||||| Sbjct: 1285 cccgaaaacctaagggttcct 1305 Score = 79.8 bits (40), Expect = 8e-12 Identities = 62/68 (91%), Gaps = 1/68 (1%) Strand = Plus / Plus Query: 6 aggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 65 |||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||| Sbjct: 850 aggggtaaag-cactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaacta 908 Query: 66 tgaatact 73 ||||||| Sbjct: 909 agaatact 916
>emb|X00512.1|ANRN03 Anacystis nidulans 23S rRNA gene and flanking regions Length = 3282 Score = 194 bits (98), Expect = 2e-46 Identities = 179/206 (86%) Strand = Plus / Plus Query: 108 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 167 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 1205 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 1264 Query: 168 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 227 |||||| || |||| | || |||||||||||||||||| ||||| ||||| |||||| Sbjct: 1265 ctaaggtcctcaaatcagaacttagtgataaaggaggtgggagtgcatagacaaccagga 1324 Query: 228 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 287 |||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| | Sbjct: 1325 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgctc 1384 Query: 288 ttgcgctgaagatgaacggggctaag 313 ||||| ||| ||||||||||||||| Sbjct: 1385 ctgcgccgaaaatgaacggggctaag 1410 Score = 107 bits (54), Expect = 3e-20 Identities = 75/82 (91%) Strand = Plus / Plus Query: 399 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 458 |||||| |||||| ||||||||||||||||||| ||||||||| ||||||||||| |||| Sbjct: 1495 gacgaaacggaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgc 1554 Query: 459 cccgaaaacccaaggtttcctc 480 ||||||| ||||||| |||||| Sbjct: 1555 cccgaaatcccaagggttcctc 1576 Score = 79.8 bits (40), Expect = 8e-12 Identities = 52/56 (92%) Strand = Plus / Plus Query: 17 cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 72 ||||| |||||||||||||||| |||||||||||||||||| ||||||| |||||| Sbjct: 1135 cactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccgaatac 1190
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 194 bits (98), Expect = 2e-46 Identities = 179/206 (86%) Strand = Plus / Minus Query: 108 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 167 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 2657343 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 2657284 Query: 168 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 227 |||||| || |||| | || |||||||||||||||||| ||||| ||||| |||||| Sbjct: 2657283 ctaaggtcctcaaatcagaacttagtgataaaggaggtgggagtgcatagacaaccagga 2657224 Query: 228 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 287 |||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| | Sbjct: 2657223 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgctc 2657164 Query: 288 ttgcgctgaagatgaacggggctaag 313 ||||| ||| ||||||||||||||| Sbjct: 2657163 ctgcgccgaaaatgaacggggctaag 2657138 Score = 194 bits (98), Expect = 2e-46 Identities = 179/206 (86%) Strand = Plus / Plus Query: 108 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 167 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 571578 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 571637 Query: 168 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 227 |||||| || |||| | || |||||||||||||||||| ||||| ||||| |||||| Sbjct: 571638 ctaaggtcctcaaatcagaacttagtgataaaggaggtgggagtgcatagacaaccagga 571697 Query: 228 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 287 |||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| | Sbjct: 571698 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgctc 571757 Query: 288 ttgcgctgaagatgaacggggctaag 313 ||||| ||| ||||||||||||||| Sbjct: 571758 ctgcgccgaaaatgaacggggctaag 571783 Score = 107 bits (54), Expect = 3e-20 Identities = 75/82 (91%) Strand = Plus / Minus Query: 399 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 458 |||||| |||||| ||||||||||||||||||| ||||||||| ||||||||||| |||| Sbjct: 2657053 gacgaaacggaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgc 2656994 Query: 459 cccgaaaacccaaggtttcctc 480 ||||||| ||||||| |||||| Sbjct: 2656993 cccgaaatcccaagggttcctc 2656972 Score = 107 bits (54), Expect = 3e-20 Identities = 75/82 (91%) Strand = Plus / Plus Query: 399 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 458 |||||| |||||| ||||||||||||||||||| ||||||||| ||||||||||| |||| Sbjct: 571868 gacgaaacggaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgc 571927 Query: 459 cccgaaaacccaaggtttcctc 480 ||||||| ||||||| |||||| Sbjct: 571928 cccgaaatcccaagggttcctc 571949 Score = 79.8 bits (40), Expect = 8e-12 Identities = 52/56 (92%) Strand = Plus / Minus Query: 17 cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 72 ||||| |||||||||||||||| |||||||||||||||||| ||||||| |||||| Sbjct: 2657413 cactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccgaatac 2657358 Score = 79.8 bits (40), Expect = 8e-12 Identities = 52/56 (92%) Strand = Plus / Plus Query: 17 cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 72 ||||| |||||||||||||||| |||||||||||||||||| ||||||| |||||| Sbjct: 571508 cactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccgaatac 571563
>gb|L49154.1|MNXCPRGOLA Monomastix sp. OKE-1 large subunit ribosomal RNA gene, partial sequence; and putative protein genes, complete cds; chloroplast Length = 6151 Score = 192 bits (97), Expect = 7e-46 Identities = 190/221 (85%) Strand = Plus / Plus Query: 111 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 170 |||||||| |||| |||||| ||||| ||| ||||||||||||||| |||||||||||| Sbjct: 964 agtgagacagtgggcgataaggttcattgtcaagagggaaacagcccagatcaccagcta 1023 Query: 171 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 230 |||||||||||| | || |||| ||||||||||||| |||| |||||||||| |||| Sbjct: 1024 aggcccctaaataagtactaagtggtaaaggaggtgggagtgctaagacagccaaaaggt 1083 Query: 231 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 290 ||||||||||||||||| |||| || |||||||||| |||||| || |||||||| |||| Sbjct: 1084 ttgcctagaagcagccatccttgaacgagtgcgtaacagctcattggtcgagcgctcttg 1143 Query: 291 cgctgaagatgaacggggctaagcgatctgccgaagctgtg 331 ||| ||| ||||||||| ||||| | ||||||||||||| Sbjct: 1144 cgccgaaaatgaacgggactaagtactttgccgaagctgtg 1184 Score = 75.8 bits (38), Expect = 1e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 399 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 458 |||||||| |||| ||||||||| |||||||||||||||||| ||| ||||| ||| Sbjct: 1255 gacgaagcagaagtgagaatgtcagcttgagtaacgaaaacagcagtgtgaatctgctgc 1314 Query: 459 cccgaaaacccaaggtttcctc 480 ||||||||||||||| |||||| Sbjct: 1315 cccgaaaacccaagggttcctc 1336 Score = 60.0 bits (30), Expect = 7e-06 Identities = 52/58 (89%), Gaps = 1/58 (1%) Strand = Plus / Plus Query: 7 ggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 64 ||||||||| |||||| ||||||||||||||| ||||||||||||||| ||||||| Sbjct: 878 ggggtaaag-cactgtatcggtgcgggctgcgaaagcggtaccaaatcgtagcaaact 934
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 192 bits (97), Expect = 7e-46 Identities = 178/205 (86%) Strand = Plus / Minus Query: 110 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 169 ||||||||| ||||||||||||| ||| ||||||||||||||||||| || ||||| || Sbjct: 1569819 cagtgagactgtgggggataagctccatggtcgagagggaaacagcccagaccaccaact 1569760 Query: 170 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 229 |||| ||| |||| |||||||||| ||||||||||| |||| ||||| |||||||| Sbjct: 1569759 aaggtccccaaattgtagctcagtgattaaggaggtgggattgcacagacaaccaggagg 1569700 Query: 230 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 289 || |||||||||||||||||||| ||||||||||||||||||||||| || |||| | | Sbjct: 1569699 ttggcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgatcct 1569640 Query: 290 gcgctgaagatgaacggggctaagc 314 |||| ||| |||||||||||||||| Sbjct: 1569639 gcgccgaaaatgaacggggctaagc 1569615 Score = 107 bits (54), Expect = 3e-20 Identities = 75/82 (91%) Strand = Plus / Minus Query: 399 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 458 ||||| ||||||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 1569539 gacgaggcggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 1569480 Query: 459 cccgaaaacccaaggtttcctc 480 |||||| | |||||||||||| Sbjct: 1569479 tccgaaagcacaaggtttcctc 1569458 Score = 79.8 bits (40), Expect = 8e-12 Identities = 52/56 (92%) Strand = Plus / Minus Query: 17 cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 72 ||||| |||||||||||||||| |||||||||||||||||| ||||||| |||||| Sbjct: 1569892 cactgattcggtgcgggctgcgagagcggtaccaaatcgagccaaactccgaatac 1569837
>emb|AM084273.1| Paulinella chromatophora plastid 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain M 0880 Length = 4934 Score = 192 bits (97), Expect = 7e-46 Identities = 181/209 (86%) Strand = Plus / Plus Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| |||||| Sbjct: 3172 tgggggataagctccatggtcaagagggaaacagcccagaccgccagctaaggtccctaa 3231 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 || | |||| |||||||||||||||||| ||| ||||| ||||||||||||||||||| Sbjct: 3232 ataagcgctaagtgataaaggaggtgggattgcccagacaaccaggaggtttgcctagaa 3291 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 ||||||| ||| || |||||||||||||||||||| ||||||| | ||||| ||| || Sbjct: 3292 gcagccatcctcaaaggagtgcgtaatagctcactggtcgagcgatcctgcgccgaaaat 3351 Query: 301 gaacggggctaagcgatctgccgaagctg 329 ||||||||||||||| | | ||||||||| Sbjct: 3352 gaacggggctaagcgttttaccgaagctg 3380 Score = 99.6 bits (50), Expect = 8e-18 Identities = 62/66 (93%) Strand = Plus / Plus Query: 7 ggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 66 ||||||||| |||||||||||| ||||||||| |||||||||||||||||| |||||||| Sbjct: 3079 ggggtaaagccactgtttcggtacgggctgcgagagcggtaccaaatcgagacaaactct 3138 Query: 67 gaatac 72 |||||| Sbjct: 3139 gaatac 3144 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 408 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 467 |||| ||||||||||||||||||| ||||||||| ||||||||||| ||||||||||| | Sbjct: 3453 gaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgccccgaaacc 3512 Query: 468 ccaaggtttcct 479 | |||| ||||| Sbjct: 3513 ctaagggttcct 3524
>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome Length = 1709204 Score = 184 bits (93), Expect = 2e-43 Identities = 180/209 (86%) Strand = Plus / Plus Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 320554 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 320613 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 || | |||| |||||||||||||||||| ||| ||||| ||||||||||||||||||| Sbjct: 320614 attaacgctaagtgataaaggaggtgggattgcccagacaaccaggaggtttgcctagaa 320673 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 ||||||| ||| || |||||||||||||||||||| ||||||| | ||||| ||| || Sbjct: 320674 gcagccatcctcaaaggagtgcgtaatagctcactggtcgagcgatcctgcgccgaaaat 320733 Query: 301 gaacggggctaagcgatctgccgaagctg 329 ||||||||||||||| | | ||||||||| Sbjct: 320734 gaacggggctaagcgttataccgaagctg 320762 Score = 89.7 bits (45), Expect = 8e-15 Identities = 66/73 (90%) Strand = Plus / Plus Query: 408 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 467 |||| ||||||||||||||||||| ||||||||| ||||||||||| ||||||||||| | Sbjct: 320838 gaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgccccgaaacc 320897 Query: 468 ccaaggtttcctc 480 | |||| |||||| Sbjct: 320898 ctaagggttcctc 320910 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 22 tttcggtgcgggctgcgcgagcggtaccaaatcga 56 ||||||||||||||||| |||||||||||||||| Sbjct: 320476 tttcggtgcgggctgcgaaagcggtaccaaatcga 320510
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 184 bits (93), Expect = 2e-43 Identities = 168/193 (87%) Strand = Plus / Minus Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 2137829 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 2137770 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 || | | || |||||||||||||||||| |||| ||||| ||||||||||||||||||| Sbjct: 2137769 atcaacactaagtgataaaggaggtgggattgcatagacaaccaggaggtttgcctagaa 2137710 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 ||||||| ||| || |||||||||||||||||||| ||||||| | ||||| ||| || Sbjct: 2137709 gcagccatcctcaaaggagtgcgtaatagctcactggtcgagcgatcctgcgccgaaaat 2137650 Query: 301 gaacggggctaag 313 ||||||||||||| Sbjct: 2137649 gaacggggctaag 2137637 Score = 184 bits (93), Expect = 2e-43 Identities = 168/193 (87%) Strand = Plus / Plus Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 477031 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 477090 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 || | | || |||||||||||||||||| |||| ||||| ||||||||||||||||||| Sbjct: 477091 atcaacactaagtgataaaggaggtgggattgcatagacaaccaggaggtttgcctagaa 477150 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 ||||||| ||| || |||||||||||||||||||| ||||||| | ||||| ||| || Sbjct: 477151 gcagccatcctcaaaggagtgcgtaatagctcactggtcgagcgatcctgcgccgaaaat 477210 Query: 301 gaacggggctaag 313 ||||||||||||| Sbjct: 477211 gaacggggctaag 477223 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Minus Query: 408 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 467 |||| ||||||||||||||||||| ||||||||| ||||||||||| |||| |||||| | Sbjct: 2137551 gaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgcaccgaaacc 2137492 Query: 468 ccaaggtttcctc 480 | |||| |||||| Sbjct: 2137491 ctaagggttcctc 2137479 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 408 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 467 |||| ||||||||||||||||||| ||||||||| ||||||||||| |||| |||||| | Sbjct: 477309 gaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgcaccgaaacc 477368 Query: 468 ccaaggtttcctc 480 | |||| |||||| Sbjct: 477369 ctaagggttcctc 477381 Score = 75.8 bits (38), Expect = 1e-10 Identities = 59/66 (89%) Strand = Plus / Minus Query: 7 ggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 66 ||||||||| ||| ||||||||||||||||| |||||||||||||||||| |||||| Sbjct: 2137922 ggggtaaagccaccatttcggtgcgggctgcgagagcggtaccaaatcgagatgaactct 2137863 Query: 67 gaatac 72 |||||| Sbjct: 2137862 gaatac 2137857 Score = 75.8 bits (38), Expect = 1e-10 Identities = 59/66 (89%) Strand = Plus / Plus Query: 7 ggggtaaagtcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 66 ||||||||| ||| ||||||||||||||||| |||||||||||||||||| |||||| Sbjct: 476938 ggggtaaagccaccatttcggtgcgggctgcgagagcggtaccaaatcgagatgaactct 476997 Query: 67 gaatac 72 |||||| Sbjct: 476998 gaatac 477003
>gb|DQ366719.1| Uncultured Prochlorococcus marinus clone ASNC729 genomic sequence Length = 38521 Score = 184 bits (93), Expect = 2e-43 Identities = 180/209 (86%) Strand = Plus / Minus Query: 121 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 180 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 19903 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 19844 Query: 181 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 240 || | |||| |||||||||||||||||| ||| ||||| ||||||||||||||||||| Sbjct: 19843 attaacgctaagtgataaaggaggtgggattgcccagacaaccaggaggtttgcctagaa 19784 Query: 241 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 300 ||||||| ||| || |||||||||||||||||||| ||||||| | ||||| ||| || Sbjct: 19783 gcagccatcctcaaaggagtgcgtaatagctcactggtcgagcgatcctgcgccgaaaat 19724 Query: 301 gaacggggctaagcgatctgccgaagctg 329 ||||||||||||||| | | ||||||||| Sbjct: 19723 gaacggggctaagcgttataccgaagctg 19695 Score = 89.7 bits (45), Expect = 8e-15 Identities = 66/73 (90%) Strand = Plus / Minus Query: 408 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 467 |||| ||||||||||||||||||| ||||||||| ||||||||||| ||||||||||| | Sbjct: 19619 gaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgccccgaaacc 19560 Query: 468 ccaaggtttcctc 480 | |||| |||||| Sbjct: 19559 ctaagggttcctc 19547 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 22 tttcggtgcgggctgcgcgagcggtaccaaatcga 56 ||||||||||||||||| |||||||||||||||| Sbjct: 19981 tttcggtgcgggctgcgaaagcggtaccaaatcga 19947 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,959,895 Number of Sequences: 3902068 Number of extensions: 2959895 Number of successful extensions: 53109 Number of sequences better than 10.0: 2363 Number of HSP's better than 10.0 without gapping: 2393 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 41296 Number of HSP's gapped (non-prelim): 11012 length of query: 480 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 458 effective length of database: 17,147,199,772 effective search space: 7853417495576 effective search space used: 7853417495576 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)