ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal36i13
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK064470.1| Oryza sativa (japonica cultivar-group) cDNA clon... 569 e-159
2ref|NM_188059.1| Oryza sativa (japonica cultivar-group), Ozsa847... 509 e-141
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 242 1e-60
4dbj|AP001081.1| Oryza sativa (japonica cultivar-group) genomic D... 242 1e-60
5gb|AY105801.1| Zea mays PCO131370 mRNA sequence 98 4e-17
6gb|DQ226906.1| Boechera divaricarpa isolate SLW-D-G11 mRNA sequence 72 2e-09
7ref|NM_117808.2| Arabidopsis thaliana endopeptidase Clp AT4G1704... 68 4e-08
8gb|AY087492.1| Arabidopsis thaliana clone 36017 mRNA, complete s... 68 4e-08
9dbj|AK117499.1| Arabidopsis thaliana At4g17040 mRNA for putative... 68 4e-08
10gb|BT000050.1| Arabidopsis thaliana unknown protein (At4g17050) ... 60 9e-06
11gb|AY081275.1| Arabidopsis thaliana unknown protein (At4g17050) ... 60 9e-06
12emb|BX826461.1|CNS0A409 Arabidopsis thaliana Full-length cDNA Co... 50 0.008
13emb|BX826645.1|CNS0A436 Arabidopsis thaliana Full-length cDNA Co... 48 0.033
14ref|XM_512312.1| PREDICTED: Pan troglodytes similar to Putative ... 44 0.52
15gb|BC002956.1| Homo sapiens ClpP caseinolytic peptidase, ATP-dep... 44 0.52
16ref|XM_849445.1| PREDICTED: Canis familiaris similar to Putative... 44 0.52
17gb|AC154352.2| Mus musculus BAC clone RP24-545J11 from chromosom... 44 0.52
18ref|XM_969571.1| PREDICTED: Tribolium castaneum similar to Putat... 44 0.52
19emb|Z50853.1|HSCLPPMR H.sapiens mRNA for CLPP 44 0.52
20emb|CR626690.1| full-length cDNA clone CS0DJ007YJ23 of T cells (... 44 0.52
21gb|AC011491.7| Homo sapiens chromosome 19 clone CTB-180A7, compl... 44 0.52
22gb|AC123920.4| Mus musculus BAC clone RP24-130L14 from 13, compl... 44 0.52
23ref|NM_006012.2| Homo sapiens ClpP caseinolytic peptidase, ATP-d... 44 0.52
24gb|AY333781.1| Chlamydomonas reinhardtii MPBQ/MSBQ methyltransfe... 42 2.1
25dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
26gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 2.1
27emb|AL731891.2|CNS08C8V Oryza sativa chromosome 12, . BAC OJ1374... 42 2.1
28gb|AY640586.1| Buellia centralis small subunit ribosomal RNA gen... 40 8.1
29gb|CP000110.1| Synechococcus sp. CC9605, complete genome 40 8.1
30ref|XM_465982.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.1
31ref|XM_469711.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.1
32ref|XM_479194.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.1
33ref|XM_507395.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 8.1
34ref|XM_506483.2| PREDICTED Oryza sativa (japonica cultivar-group... 40 8.1
35gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome 40 8.1
36gb|AC154992.11| Mus musculus chromosome 1, clone RP23-420P19, co... 40 8.1
37gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 8.1
38emb|Z82062.1|CEW02A11 Caenorhabditis elegans Cosmid W02A11, comp... 40 8.1
39gb|AC123797.3| Mus musculus BAC clone RP24-326O4 from chromosome... 40 8.1
40gb|AC101833.14| Mus musculus chromosome 1, clone RP24-496H15, co... 40 8.1
41emb|Z68280.1|HSL25A3 Human DNA sequence from clone LA04NC01-25A3... 40 8.1
42emb|AL353788.33| Human DNA sequence from clone RP11-112K13 on ch... 40 8.1
43gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 40 8.1
44emb|AL031279.1|HS163O16 Human DNA sequence from clone RP1-163O16... 40 8.1
45emb|CR450848.13| Zebrafish DNA sequence from clone CH211-149E23 ... 40 8.1
46gb|AC087852.11| Oryza sativa chromosome 3 BAC OJ1124_H03 genomic... 40 8.1
47gb|AC096629.11| Bos taurus clone rp42-152a4, complete sequence 40 8.1
48gb|AC092858.21| Bos taurus clone rp42-147e22, complete sequence 40 8.1
49gb|AC098686.11| Bos taurus clone rp42-146c17, complete sequence 40 8.1
50gb|AC007119.6| Arabidopsis thaliana chromosome 2 clone F2G1 map ... 40 8.1
51gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome 40 8.1
52gb|AC146538.2| Gasterosteus aculeatus clone CH213-118G22, comple... 40 8.1
53dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
54dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
55dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
56dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
57dbj|AP004650.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
58emb|BX255930.3| Zebrafish DNA sequence from clone DKEY-101K6 in ... 40 8.1
59dbj|AP005845.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
60dbj|AP004341.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
61dbj|AK110860.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.1
62dbj|AK106353.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.1
63dbj|AK103285.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.1
64dbj|AK069142.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.1
65dbj|AK058506.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.1
66emb|BX465861.7| Human DNA sequence from clone CTD-2314C7 on chro... 40 8.1 
>dbj|AK064470.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-110-H04, full
           insert sequence
          Length = 685

 Score =  569 bits (287), Expect = e-159
 Identities = 404/443 (91%)
 Strand = Plus / Plus

                                                                       
Query: 63  gtcgtcgcgatggttatcccgttcctgaggggaacagcatttgagcagccgccgccggat 122
           ||||||||||||||  | |||||||||||||| || || |   |||||||||||||||| 
Sbjct: 243 gtcgtcgcgatggtggtgccgttcctgagggggaccgcgtggcagcagccgccgccggac 302

                                                                       
Query: 123 ttggcctcgttcctttacaagaacaggatcgtatacctgggtatgtgcctcgtgccgtcg 182
            ||||||||||||| ||||||||||||||||| ||||| || ||||||||||||||||||
Sbjct: 303 ctggcctcgttcctgtacaagaacaggatcgtctacctcgggatgtgcctcgtgccgtcg 362

                                                                       
Query: 183 gtgacggagctcatgctcgccgagttcctctaccttcagtacgaggacgcagagaagccc 242
           ||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||
Sbjct: 363 gtgacggagctcatgctcgccgagttcctctacctccagtacgacgacgccgagaagccc 422

                                                                       
Query: 243 atctacatgtacatcaactccaccggtactaccaagaatggcgagaaattgggttacgag 302
           |||||| | ||||||||||||||||| || ||||||||||||||||||||||| || |||
Sbjct: 423 atctacctctacatcaactccaccggcacaaccaagaatggcgagaaattgggctatgag 482

                                                                       
Query: 303 acggaagcttttgctgtatatgatgccatgaggtatgtcaaaattccaattttcacactc 362
           || |||||||||||  |||||||||| ||||||||||||||| |||||||||||||  | 
Sbjct: 483 acagaagcttttgcaatatatgatgctatgaggtatgtcaaagttccaattttcaccttg 542

                                                                       
Query: 363 tgtattggcaatgcatggggagaagctgctttacccttggctgctggtgctaaaggtaac 422
           ||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 543 tgtgttggcaatgcatggggagaagctgctttactcttggctgctggtgctaaaggtaac 602

                                                                       
Query: 423 cgtgctgcacttccatcatcgacgataatgatgaagcagccaattggtcgatttcaaggt 482
           |||||||| |||||||| |||||||||||||| ||||||||||||||||| |||||||| 
Sbjct: 603 cgtgctgcgcttccatcgtcgacgataatgataaagcagccaattggtcgctttcaagga 662

                                  
Query: 483 caggcgacagatgttgacatagc 505
           |||||||||||||||||||||||
Sbjct: 663 caggcgacagatgttgacatagc 685
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>ref|NM_188059.1| Oryza sativa (japonica cultivar-group), Ozsa8479 predicted mRNA
          Length = 603

 Score =  509 bits (257), Expect = e-141
 Identities = 374/413 (90%)
 Strand = Plus / Plus

                                                                       
Query: 49  gcggcgctagggatgtcgtcgcgatggttatcccgttcctgaggggaacagcatttgagc 108
           ||||||| ||||| ||||||||||||||  | |||||||||||||| || || |   |||
Sbjct: 167 gcggcgccagggacgtcgtcgcgatggtggtgccgttcctgagggggaccgcgtggcagc 226

                                                                       
Query: 109 agccgccgccggatttggcctcgttcctttacaagaacaggatcgtatacctgggtatgt 168
           |||||||||||||  ||||||||||||| ||||||||||||||||| ||||| || ||||
Sbjct: 227 agccgccgccggacctggcctcgttcctgtacaagaacaggatcgtctacctcgggatgt 286

                                                                       
Query: 169 gcctcgtgccgtcggtgacggagctcatgctcgccgagttcctctaccttcagtacgagg 228
           ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 287 gcctcgtgccgtcggtgacggagctcatgctcgccgagttcctctacctccagtacgacg 346

                                                                       
Query: 229 acgcagagaagcccatctacatgtacatcaactccaccggtactaccaagaatggcgaga 288
           |||| ||||||||||||||| | ||||||||||||||||| || ||||||||||||||||
Sbjct: 347 acgccgagaagcccatctacctctacatcaactccaccggcacaaccaagaatggcgaga 406

                                                                       
Query: 289 aattgggttacgagacggaagcttttgctgtatatgatgccatgaggtatgtcaaaattc 348
           ||||||| || ||||| |||||||||||  |||||||||| ||||||||||||||| |||
Sbjct: 407 aattgggctatgagacagaagcttttgcaatatatgatgctatgaggtatgtcaaagttc 466

                                                                       
Query: 349 caattttcacactctgtattggcaatgcatggggagaagctgctttacccttggctgctg 408
           ||||||||||  | ||| |||||||||||||||||||||||||||||| |||||||||||
Sbjct: 467 caattttcaccttgtgtgttggcaatgcatggggagaagctgctttactcttggctgctg 526

                                                                
Query: 409 gtgctaaaggtaaccgtgctgcacttccatcatcgacgataatgatgaagcag 461
           |||||||||||||||||||||| |||||||| |||||||||||||| ||||||
Sbjct: 527 gtgctaaaggtaaccgtgctgcgcttccatcgtcgacgataatgataaagcag 579
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  242 bits (122), Expect = 1e-60
 Identities = 179/198 (90%)
 Strand = Plus / Minus

                                                                           
Query: 81      ccgttcctgaggggaacagcatttgagcagccgccgccggatttggcctcgttcctttac 140
               |||||||||||||| || || |   ||||||||||||||||  ||||||||||||| |||
Sbjct: 9381816 ccgttcctgagggggaccgcgtggcagcagccgccgccggacctggcctcgttcctgtac 9381757

                                                                           
Query: 141     aagaacaggatcgtatacctgggtatgtgcctcgtgccgtcggtgacggagctcatgctc 200
               |||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 9381756 aagaacaggatcgtctacctcgggatgtgcctcgtgccgtcggtgacggagctcatgctc 9381697

                                                                           
Query: 201     gccgagttcctctaccttcagtacgaggacgcagagaagcccatctacatgtacatcaac 260
               ||||||||||||||||| |||||||| ||||| ||||||||||||||| | |||||||||
Sbjct: 9381696 gccgagttcctctacctccagtacgacgacgccgagaagcccatctacctctacatcaac 9381637

                                 
Query: 261     tccaccggtactaccaag 278
               |||||||| || ||||||
Sbjct: 9381636 tccaccggcacaaccaag 9381619



 Score =  184 bits (93), Expect = 2e-43
 Identities = 120/129 (93%)
 Strand = Plus / Minus

                                                                           
Query: 333     aggtatgtcaaaattccaattttcacactctgtattggcaatgcatggggagaagctgct 392
               |||||||||||| |||||||||||||  | ||| ||||||||||||||||||||||||||
Sbjct: 9380088 aggtatgtcaaagttccaattttcaccttgtgtgttggcaatgcatggggagaagctgct 9380029

                                                                           
Query: 393     ttacccttggctgctggtgctaaaggtaaccgtgctgcacttccatcatcgacgataatg 452
               |||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 9380028 ttactcttggctgctggtgctaaaggtaaccgtgctgcgcttccatcgtcgacgataatg 9379969

                        
Query: 453     atgaagcag 461
               || ||||||
Sbjct: 9379968 ataaagcag 9379960



 Score =  127 bits (64), Expect = 4e-26
 Identities = 79/84 (94%)
 Strand = Plus / Minus

                                                                           
Query: 458     gcagccaattggtcgatttcaaggtcaggcgacagatgttgacatagcaagaaaggaaat 517
               ||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 9379722 gcagccaattggtcgctttcaaggacaggcgacagatgttgacatagcaagaaaagaaat 9379663

                                       
Query: 518     acgaaatgtgaagatagaaatggt 541
                ||||||||||| |||||||||||
Sbjct: 9379662 ccgaaatgtgaaaatagaaatggt 9379639



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 54/60 (90%)
 Strand = Plus / Minus

                                                                           
Query: 277     agaatggcgagaaattgggttacgagacggaagcttttgctgtatatgatgccatgaggt 336
               ||||||||||||||||||| || ||||| |||||||||||  |||||||||| |||||||
Sbjct: 9381235 agaatggcgagaaattgggctatgagacagaagcttttgcaatatatgatgctatgaggt 9381176



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                  
Query: 419     taaccgtgctgcacttccatcatcgacgataatga 453
               |||||||||||||||||||||||||| || |||||
Sbjct: 9397939 taaccgtgctgcacttccatcatcgatgacaatga 9397973



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 41/45 (91%), Gaps = 1/45 (2%)
 Strand = Plus / Plus

                                                            
Query: 410     tgctaaaggtaaccgtgc-tgcacttccatcatcgacgataatga 453
               |||||||||||||||||| |||||||||||| | || ||||||||
Sbjct: 9404046 tgctaaaggtaaccgtgcatgcacttccatcgttgatgataatga 9404090



 Score = 44.1 bits (22), Expect = 0.52
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                             
Query: 541     ttaagctgctgtcaagacacataggtaaaccaatggaagagattgc 586
               |||||||||||||||| || || |||||| || | |||||||||||
Sbjct: 9378497 ttaagctgctgtcaaggcatatcggtaaatcagtagaagagattgc 9378452



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 367     ttggcaatgcatggggagaa 386
               ||||||||||||||||||||
Sbjct: 9416199 ttggcaatgcatggggagaa 9416218



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 49      gcggcgctagggatgtcgtcgcgatggt 76
               ||||||| ||||| ||||||||||||||
Sbjct: 9381939 gcggcgccagggacgtcgtcgcgatggt 9381912
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>dbj|AP001081.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0693B08
          Length = 140812

 Score =  242 bits (122), Expect = 1e-60
 Identities = 179/198 (90%)
 Strand = Plus / Minus

                                                                         
Query: 81    ccgttcctgaggggaacagcatttgagcagccgccgccggatttggcctcgttcctttac 140
             |||||||||||||| || || |   ||||||||||||||||  ||||||||||||| |||
Sbjct: 52143 ccgttcctgagggggaccgcgtggcagcagccgccgccggacctggcctcgttcctgtac 52084

                                                                         
Query: 141   aagaacaggatcgtatacctgggtatgtgcctcgtgccgtcggtgacggagctcatgctc 200
             |||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 52083 aagaacaggatcgtctacctcgggatgtgcctcgtgccgtcggtgacggagctcatgctc 52024

                                                                         
Query: 201   gccgagttcctctaccttcagtacgaggacgcagagaagcccatctacatgtacatcaac 260
             ||||||||||||||||| |||||||| ||||| ||||||||||||||| | |||||||||
Sbjct: 52023 gccgagttcctctacctccagtacgacgacgccgagaagcccatctacctctacatcaac 51964

                               
Query: 261   tccaccggtactaccaag 278
             |||||||| || ||||||
Sbjct: 51963 tccaccggcacaaccaag 51946



 Score =  184 bits (93), Expect = 2e-43
 Identities = 120/129 (93%)
 Strand = Plus / Minus

                                                                         
Query: 333   aggtatgtcaaaattccaattttcacactctgtattggcaatgcatggggagaagctgct 392
             |||||||||||| |||||||||||||  | ||| ||||||||||||||||||||||||||
Sbjct: 50415 aggtatgtcaaagttccaattttcaccttgtgtgttggcaatgcatggggagaagctgct 50356

                                                                         
Query: 393   ttacccttggctgctggtgctaaaggtaaccgtgctgcacttccatcatcgacgataatg 452
             |||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 50355 ttactcttggctgctggtgctaaaggtaaccgtgctgcgcttccatcgtcgacgataatg 50296

                      
Query: 453   atgaagcag 461
             || ||||||
Sbjct: 50295 ataaagcag 50287



 Score =  127 bits (64), Expect = 4e-26
 Identities = 79/84 (94%)
 Strand = Plus / Minus

                                                                         
Query: 458   gcagccaattggtcgatttcaaggtcaggcgacagatgttgacatagcaagaaaggaaat 517
             ||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 50049 gcagccaattggtcgctttcaaggacaggcgacagatgttgacatagcaagaaaagaaat 49990

                                     
Query: 518   acgaaatgtgaagatagaaatggt 541
              ||||||||||| |||||||||||
Sbjct: 49989 ccgaaatgtgaaaatagaaatggt 49966



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 54/60 (90%)
 Strand = Plus / Minus

                                                                         
Query: 277   agaatggcgagaaattgggttacgagacggaagcttttgctgtatatgatgccatgaggt 336
             ||||||||||||||||||| || ||||| |||||||||||  |||||||||| |||||||
Sbjct: 51562 agaatggcgagaaattgggctatgagacagaagcttttgcaatatatgatgctatgaggt 51503



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                
Query: 419   taaccgtgctgcacttccatcatcgacgataatga 453
             |||||||||||||||||||||||||| || |||||
Sbjct: 68266 taaccgtgctgcacttccatcatcgatgacaatga 68300



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 41/45 (91%), Gaps = 1/45 (2%)
 Strand = Plus / Plus

                                                          
Query: 410   tgctaaaggtaaccgtgc-tgcacttccatcatcgacgataatga 453
             |||||||||||||||||| |||||||||||| | || ||||||||
Sbjct: 74373 tgctaaaggtaaccgtgcatgcacttccatcgttgatgataatga 74417



 Score = 44.1 bits (22), Expect = 0.52
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                           
Query: 541   ttaagctgctgtcaagacacataggtaaaccaatggaagagattgc 586
             |||||||||||||||| || || |||||| || | |||||||||||
Sbjct: 48824 ttaagctgctgtcaaggcatatcggtaaatcagtagaagagattgc 48779



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 367   ttggcaatgcatggggagaa 386
             ||||||||||||||||||||
Sbjct: 86526 ttggcaatgcatggggagaa 86545



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 49    gcggcgctagggatgtcgtcgcgatggt 76
             ||||||| ||||| ||||||||||||||
Sbjct: 52266 gcggcgccagggacgtcgtcgcgatggt 52239
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>gb|AY105801.1| Zea mays PCO131370 mRNA sequence
          Length = 616

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 61/65 (93%)
 Strand = Plus / Minus

                                                                       
Query: 533 agaaatggttaagctgctgtcaagacacataggtaaaccaatggaagagattgcccgaga 592
           ||||||||||||||||||| |||||||||| ||||||||||||||||||||||| || ||
Sbjct: 604 agaaatggttaagctgctggcaagacacattggtaaaccaatggaagagattgctcggga 545

                
Query: 593 catca 597
           |||||
Sbjct: 544 catca 540
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>gb|DQ226906.1| Boechera divaricarpa isolate SLW-D-G11 mRNA sequence
          Length = 681

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 222/284 (78%)
 Strand = Plus / Minus

                                                                       
Query: 198 ctcgccgagttcctctaccttcagtacgaggacgcagagaagcccatctacatgtacatc 257
           ||||| ||||| || ||||||||||| || ||||  || ||||| || ||| | ||||| 
Sbjct: 659 ctcgcagagtttctttaccttcagtatgaagacgaggaaaagcctatttacctttacata 600

                                                                       
Query: 258 aactccaccggtactaccaagaatggcgagaaattgggttacgagacggaagcttttgct 317
           ||||| || || || ||||||||||| || || ||||| || || || || |||||||| 
Sbjct: 599 aactcgacagggacaaccaagaatggtgaaaagttgggctatgatactgaggcttttgca 540

                                                                       
Query: 318 gtatatgatgccatgaggtatgtcaaaattccaattttcacactctgtattggcaatgca 377
            | ||||||| |||| |||||||||||   ||||| || || || ||  | || ||||| 
Sbjct: 539 atctatgatgtcatggggtatgtcaaaccaccaatctttactctttgcgtcggaaatgct 480

                                                                       
Query: 378 tggggagaagctgctttacccttggctgctggtgctaaaggtaaccgtgctgcacttcca 437
           ||||| ||||||||||| |   || |||||||||| ||||| || ||| ||||  | || 
Sbjct: 479 tggggtgaagctgctttgcttctgactgctggtgcaaaaggaaatcgttctgcgttgccc 420

                                                       
Query: 438 tcatcgacgataatgatgaagcagccaattggtcgatttcaagg 481
           ||||| || || ||||| |||||||| |||| ||||||||||||
Sbjct: 419 tcatcaactattatgataaagcagcccattgctcgatttcaagg 376
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>ref|NM_117808.2| Arabidopsis thaliana endopeptidase Clp AT4G17040 mRNA, complete cds
          Length = 1247

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 244/314 (77%)
 Strand = Plus / Plus

                                                                       
Query: 204 gagttcctctaccttcagtacgaggacgcagagaagcccatctacatgtacatcaactcc 263
           ||||| || ||||||||||| || ||||  || ||||| || ||| | ||||| ||||| 
Sbjct: 462 gagtttctttaccttcagtatgaagacgaggaaaagcctatttacctttacataaactcg 521

                                                                       
Query: 264 accggtactaccaagaatggcgagaaattgggttacgagacggaagcttttgctgtatat 323
           || || || ||||||||||| || || ||||| || || || || ||||||||  | |||
Sbjct: 522 actgggacaaccaagaatggtgaaaagttgggctatgatactgaggcttttgcaatctat 581

                                                                       
Query: 324 gatgccatgaggtatgtcaaaattccaattttcacactctgtattggcaatgcatgggga 383
           |||| |||| |||||||||||   ||||| || || || ||  | || ||||| ||||| 
Sbjct: 582 gatgtcatggggtatgtcaaaccaccaatctttactctttgcgtcgggaatgcttggggt 641

                                                                       
Query: 384 gaagctgctttacccttggctgctggtgctaaaggtaaccgtgctgcacttccatcatcg 443
           ||||||||||| |   || |||||||||| ||||| || ||  ||||  | || ||||| 
Sbjct: 642 gaagctgctttgcttctgactgctggtgcaaaaggaaatcgatctgcgttgccctcatca 701

                                                                       
Query: 444 acgataatgatgaagcagccaattggtcgatttcaaggtcaggcgacagatgttgacata 503
           || || ||||| |||||||| |||| |||||||||||| || || || |||||||| || 
Sbjct: 702 actattatgataaagcagcccattgctcgatttcaaggccaagcaactgatgttgaaatt 761

                         
Query: 504 gcaagaaaggaaat 517
           ||||| || |||||
Sbjct: 762 gcaaggaaagaaat 775
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>gb|AY087492.1| Arabidopsis thaliana clone 36017 mRNA, complete sequence
          Length = 1236

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 244/314 (77%)
 Strand = Plus / Plus

                                                                       
Query: 204 gagttcctctaccttcagtacgaggacgcagagaagcccatctacatgtacatcaactcc 263
           ||||| || ||||||||||| || ||||  || ||||| || ||| | ||||| ||||| 
Sbjct: 462 gagtttctttaccttcagtatgaagacgaggaaaagcctatttacctttacataaactcg 521

                                                                       
Query: 264 accggtactaccaagaatggcgagaaattgggttacgagacggaagcttttgctgtatat 323
           || || || ||||||||||| || || ||||| || || || || ||||||||  | |||
Sbjct: 522 actgggacaaccaagaatggtgaaaagttgggctatgatactgaggcttttgcaatctat 581

                                                                       
Query: 324 gatgccatgaggtatgtcaaaattccaattttcacactctgtattggcaatgcatgggga 383
           |||| |||| |||||||||||   ||||| || || || ||  | || ||||| ||||| 
Sbjct: 582 gatgtcatggggtatgtcaaaccaccaatctttactctttgcgtcgggaatgcgtggggt 641

                                                                       
Query: 384 gaagctgctttacccttggctgctggtgctaaaggtaaccgtgctgcacttccatcatcg 443
           ||||||||||| |   || |||||||||| ||||| || ||  ||||  | || ||||| 
Sbjct: 642 gaagctgctttgcttctgactgctggtgcaaaaggaaatcgatctgcgttgccctcatca 701

                                                                       
Query: 444 acgataatgatgaagcagccaattggtcgatttcaaggtcaggcgacagatgttgacata 503
           || || ||||| |||||||| |||| |||||||||||| || || || |||||||| || 
Sbjct: 702 actattatgataaagcagcccattgctcgatttcaaggccaagcaactgatgttgaaatt 761

                         
Query: 504 gcaagaaaggaaat 517
           ||||| || |||||
Sbjct: 762 gcaaggaaagaaat 775
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>dbj|AK117499.1| Arabidopsis thaliana At4g17040 mRNA for putative ClpP protease
           complex subunit ClpR4, complete cds, clone:
           RAFL17-13-C24
          Length = 1195

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 244/314 (77%)
 Strand = Plus / Plus

                                                                       
Query: 204 gagttcctctaccttcagtacgaggacgcagagaagcccatctacatgtacatcaactcc 263
           ||||| || ||||||||||| || ||||  || ||||| || ||| | ||||| ||||| 
Sbjct: 417 gagtttctttaccttcagtatgaagacgaggaaaagcctatttacctttacataaactcg 476

                                                                       
Query: 264 accggtactaccaagaatggcgagaaattgggttacgagacggaagcttttgctgtatat 323
           || || || ||||||||||| || || ||||| || || || || ||||||||  | |||
Sbjct: 477 actgggacaaccaagaatggtgaaaagttgggctatgatactgaggcttttgcaatctat 536

                                                                       
Query: 324 gatgccatgaggtatgtcaaaattccaattttcacactctgtattggcaatgcatgggga 383
           |||| |||| |||||||||||   ||||| || || || ||  | || ||||| ||||| 
Sbjct: 537 gatgtcatggggtatgtcaaaccaccaatctttactctttgcgtcgggaatgcttggggt 596

                                                                       
Query: 384 gaagctgctttacccttggctgctggtgctaaaggtaaccgtgctgcacttccatcatcg 443
           ||||||||||| |   || |||||||||| ||||| || ||  ||||  | || ||||| 
Sbjct: 597 gaagctgctttgcttctgactgctggtgcaaaaggaaatcgatctgcgttgccctcatca 656

                                                                       
Query: 444 acgataatgatgaagcagccaattggtcgatttcaaggtcaggcgacagatgttgacata 503
           || || ||||| |||||||| |||| |||||||||||| || || || |||||||| || 
Sbjct: 657 actattatgataaagcagcccattgctcgatttcaaggccaagcaactgatgttgaaatt 716

                         
Query: 504 gcaagaaaggaaat 517
           ||||| || |||||
Sbjct: 717 gcaaggaaagaaat 730
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>gb|BT000050.1| Arabidopsis thaliana unknown protein (At4g17050) mRNA, complete cds
          Length = 1119

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 207/266 (77%)
 Strand = Plus / Plus

                                                                       
Query: 252 tacatcaactccaccggtactaccaagaatggcgagaaattgggttacgagacggaagct 311
           ||||| ||||| || || || ||||||||||| || || ||||| || || || || |||
Sbjct: 445 tacataaactcgactgggacaaccaagaatggtgaaaagttgggctatgatactgaggct 504

                                                                       
Query: 312 tttgctgtatatgatgccatgaggtatgtcaaaattccaattttcacactctgtattggc 371
           |||||  | ||||||| |||| |||||||||||   ||||| || || || ||  | || 
Sbjct: 505 tttgcaatctatgatgtcatggggtatgtcaaaccaccaatctttactctttgcgtcggg 564

                                                                       
Query: 372 aatgcatggggagaagctgctttacccttggctgctggtgctaaaggtaaccgtgctgca 431
           ||||| ||||| ||||||||||| |   || |||||||||| ||||| || ||  |||| 
Sbjct: 565 aatgcttggggtgaagctgctttgcttctgactgctggtgcaaaaggaaatcgatctgcg 624

                                                                       
Query: 432 cttccatcatcgacgataatgatgaagcagccaattggtcgatttcaaggtcaggcgaca 491
            | || ||||| || || ||||| |||||||| |||| |||||||||||| || || || 
Sbjct: 625 ttgccctcatcaactattatgataaagcagcccattgctcgatttcaaggccaagcaact 684

                                     
Query: 492 gatgttgacatagcaagaaaggaaat 517
           |||||||| || ||||| || |||||
Sbjct: 685 gatgttgaaattgcaaggaaagaaat 710
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>gb|AY081275.1| Arabidopsis thaliana unknown protein (At4g17050) mRNA, complete cds
          Length = 1201

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 207/266 (77%)
 Strand = Plus / Plus

                                                                       
Query: 252 tacatcaactccaccggtactaccaagaatggcgagaaattgggttacgagacggaagct 311
           ||||| ||||| || || || ||||||||||| || || ||||| || || || || |||
Sbjct: 476 tacataaactcgactgggacaaccaagaatggtgaaaagttgggctatgatactgaggct 535

                                                                       
Query: 312 tttgctgtatatgatgccatgaggtatgtcaaaattccaattttcacactctgtattggc 371
           |||||  | ||||||| |||| |||||||||||   ||||| || || || ||  | || 
Sbjct: 536 tttgcaatctatgatgtcatggggtatgtcaaaccaccaatctttactctttgcgtcggg 595

                                                                       
Query: 372 aatgcatggggagaagctgctttacccttggctgctggtgctaaaggtaaccgtgctgca 431
           ||||| ||||| ||||||||||| |   || |||||||||| ||||| || ||  |||| 
Sbjct: 596 aatgcttggggtgaagctgctttgcttctgactgctggtgcaaaaggaaatcgatctgcg 655

                                                                       
Query: 432 cttccatcatcgacgataatgatgaagcagccaattggtcgatttcaaggtcaggcgaca 491
            | || ||||| || || ||||| |||||||| |||| |||||||||||| || || || 
Sbjct: 656 ttgccctcatcaactattatgataaagcagcccattgctcgatttcaaggccaagcaact 715

                                     
Query: 492 gatgttgacatagcaagaaaggaaat 517
           |||||||| || ||||| || |||||
Sbjct: 716 gatgttgaaattgcaaggaaagaaat 741
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>emb|BX826461.1|CNS0A409 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB28ZD09 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1346

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 112/141 (79%)
 Strand = Plus / Plus

                                                                       
Query: 204 gagttcctctaccttcagtacgaggacgcagagaagcccatctacatgtacatcaactcc 263
           ||||| || ||||||||||| || ||||  || ||||| || ||| | ||||| ||||| 
Sbjct: 451 gagtttctttaccttcagtatgaagacgaggaaaagcctatttacctttacataaactcg 510

                                                                       
Query: 264 accggtactaccaagaatggcgagaaattgggttacgagacggaagcttttgctgtatat 323
           || || || ||||||||||| || || ||||| || || || || ||||||||  | |||
Sbjct: 511 actgggacaaccaagaatggtgaaaagttgggctatgatactgaggcttttgcaatctat 570

                                
Query: 324 gatgccatgaggtatgtcaaa 344
           |||| |||| |||||||||||
Sbjct: 571 gatgtcatggggtatgtcaaa 591
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>emb|BX826645.1|CNS0A436 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB4ZF09 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 606

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 57/68 (83%)
 Strand = Plus / Plus

                                                                       
Query: 450 atgatgaagcagccaattggtcgatttcaaggtcaggcgacagatgttgacatagcaaga 509
           ||||| |||||||| |||| |||||||||||| || || || |||||||| || ||||| 
Sbjct: 77  atgataaagcagcccattgctcgatttcaaggccaagcaactgatgttgaaattgcaagg 136

                   
Query: 510 aaggaaat 517
           || |||||
Sbjct: 137 aaagaaat 144
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>ref|XM_512312.1| PREDICTED: Pan troglodytes similar to Putative ATP-dependent Clp
           protease proteolytic subunit, mitochondrial precursor
           (Endopeptidase Clp) (LOC455637), mRNA
          Length = 1454

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 235 agaagcccatctacatgtacatcaac 260
           ||||||||||| ||||||||||||||
Sbjct: 457 agaagcccatccacatgtacatcaac 482
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>gb|BC002956.1| Homo sapiens ClpP caseinolytic peptidase, ATP-dependent,
           proteolytic subunit homolog (E. coli), mRNA (cDNA clone
           MGC:1379 IMAGE:3542292), complete cds
          Length = 1185

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 235 agaagcccatctacatgtacatcaac 260
           ||||||||||| ||||||||||||||
Sbjct: 458 agaagcccatccacatgtacatcaac 483
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>ref|XM_849445.1| PREDICTED: Canis familiaris similar to Putative ATP-dependent Clp
           protease proteolytic subunit, mitochondrial precursor
           (Endopeptidase Clp) (LOC611738), mRNA
          Length = 1015

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 235 agaagcccatctacatgtacatcaac 260
           ||||||||||| ||||||||||||||
Sbjct: 331 agaagcccatccacatgtacatcaac 356
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>gb|AC154352.2| Mus musculus BAC clone RP24-545J11 from chromosome 13, complete
             sequence
          Length = 199388

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 330   atgaggtatgtcaaaattccaa 351
             ||||||||||||||||||||||
Sbjct: 67761 atgaggtatgtcaaaattccaa 67740
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>ref|XM_969571.1| PREDICTED: Tribolium castaneum similar to Putative ATP-dependent
           Clp protease proteolytic subunit, mitochondrial
           precursor (Endopeptidase Clp) (LOC663531), mRNA
          Length = 777

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 237 aagcccatctacatgtacatcaactc 262
           ||||||||| ||||||||||||||||
Sbjct: 277 aagcccatccacatgtacatcaactc 302
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>emb|Z50853.1|HSCLPPMR H.sapiens mRNA for CLPP
          Length = 1044

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 235 agaagcccatctacatgtacatcaac 260
           ||||||||||| ||||||||||||||
Sbjct: 354 agaagcccatccacatgtacatcaac 379
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>emb|CR626690.1| full-length cDNA clone CS0DJ007YJ23 of T cells (Jurkat cell line)
           Cot 10-normalized of Homo sapiens (human)
          Length = 872

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 235 agaagcccatctacatgtacatcaac 260
           ||||||||||| ||||||||||||||
Sbjct: 237 agaagcccatccacatgtacatcaac 262
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>gb|AC011491.7| Homo sapiens chromosome 19 clone CTB-180A7, complete sequence
          Length = 118820

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 235   agaagcccatctacatgtacatcaac 260
             ||||||||||| ||||||||||||||
Sbjct: 64028 agaagcccatccacatgtacatcaac 64053
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>gb|AC123920.4| Mus musculus BAC clone RP24-130L14 from 13, complete sequence
          Length = 170268

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 330    atgaggtatgtcaaaattccaa 351
              ||||||||||||||||||||||
Sbjct: 156876 atgaggtatgtcaaaattccaa 156855
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>ref|NM_006012.2| Homo sapiens ClpP caseinolytic peptidase, ATP-dependent,
           proteolytic subunit homolog (E. coli) (CLPP), nuclear
           gene encoding mitochondrial protein, mRNA
          Length = 1194

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 235 agaagcccatctacatgtacatcaac 260
           ||||||||||| ||||||||||||||
Sbjct: 458 agaagcccatccacatgtacatcaac 483
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>gb|AY333781.1| Chlamydomonas reinhardtii MPBQ/MSBQ methyltransferase (VTE3) mRNA,
           complete cds; nuclear gene for chloroplast product
          Length = 1014

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 239 gcccatctacatgtacatcaa 259
           |||||||||||||||||||||
Sbjct: 960 gcccatctacatgtacatcaa 980
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 11       cgcttcctgaccccccacccg 31
                |||||||||||||||||||||
Sbjct: 26643301 cgcttcctgaccccccacccg 26643281
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 11       cgcttcctgaccccccacccg 31
                |||||||||||||||||||||
Sbjct: 26571470 cgcttcctgaccccccacccg 26571450
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>emb|AL731891.2|CNS08C8V Oryza sativa chromosome 12, . BAC OJ1374_A04 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 101173

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 11    cgcttcctgaccccccacccg 31
             |||||||||||||||||||||
Sbjct: 62171 cgcttcctgaccccccacccg 62151
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>gb|AY640586.1| Buellia centralis small subunit ribosomal RNA gene, partial
           sequence; mitochondrial
          Length = 832

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 551 gtcaagacacataggtaaac 570
           ||||||||||||||||||||
Sbjct: 173 gtcaagacacataggtaaac 154
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>gb|CP000110.1| Synechococcus sp. CC9605, complete genome
          Length = 2510659

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 237    aagcccatctacatgtacatcaactccaccgg 268
              ||||| |||||| |||||||||||||| ||||
Sbjct: 809972 aagccgatctacctgtacatcaactcccccgg 809941
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>ref|XM_465982.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2581

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 198  ctcgccgagttcctctacct 217
            ||||||||||||||||||||
Sbjct: 1645 ctcgccgagttcctctacct 1664
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>ref|XM_469711.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1224

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 37 ccgccggtggccgcggcgct 56
          ||||||||||||||||||||
Sbjct: 77 ccgccggtggccgcggcgct 58
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>ref|XM_479194.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 812

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 35  ccccgccggtggccgcggcg 54
           ||||||||||||||||||||
Sbjct: 153 ccccgccggtggccgcggcg 172
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>ref|XM_507395.1| PREDICTED Oryza sativa (japonica cultivar-group), P0524E08.111 mRNA
          Length = 877

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 35  ccccgccggtggccgcggcg 54
           ||||||||||||||||||||
Sbjct: 231 ccccgccggtggccgcggcg 250
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>ref|XM_506483.2| PREDICTED Oryza sativa (japonica cultivar-group), P0524E08.111 mRNA
          Length = 1077

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 35  ccccgccggtggccgcggcg 54
           ||||||||||||||||||||
Sbjct: 259 ccccgccggtggccgcggcg 278
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>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 198     ctcgccgagttcctctacct 217
               ||||||||||||||||||||
Sbjct: 1260017 ctcgccgagttcctctacct 1260036
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>gb|AC154992.11| Mus musculus chromosome 1, clone RP23-420P19, complete sequence
          Length = 217255

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 507   agaaaggaaatacgaaatgt 526
             ||||||||||||||||||||
Sbjct: 66537 agaaaggaaatacgaaatgt 66556
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 37       ccgccggtggccgcggcgct 56
                ||||||||||||||||||||
Sbjct: 30349204 ccgccggtggccgcggcgct 30349185
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>emb|Z82062.1|CEW02A11 Caenorhabditis elegans Cosmid W02A11, complete sequence
          Length = 32203

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 336  tatgtcaaaattccaatttt 355
            ||||||||||||||||||||
Sbjct: 3615 tatgtcaaaattccaatttt 3596
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>gb|AC123797.3| Mus musculus BAC clone RP24-326O4 from chromosome 9, complete sequence
          Length = 135119

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 566   taaaccaatggaagagattg 585
             ||||||||||||||||||||
Sbjct: 28062 taaaccaatggaagagattg 28081
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>gb|AC101833.14| Mus musculus chromosome 1, clone RP24-496H15, complete sequence
          Length = 167684

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 507    agaaaggaaatacgaaatgt 526
              ||||||||||||||||||||
Sbjct: 161931 agaaaggaaatacgaaatgt 161950
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>emb|Z68280.1|HSL25A3 Human DNA sequence from clone LA04NC01-25A3 on chromosome 4, complete
             sequence
          Length = 43583

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 539   ggttaagctgctgtcaagac 558
             ||||||||||||||||||||
Sbjct: 24781 ggttaagctgctgtcaagac 24800
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>emb|AL353788.33| Human DNA sequence from clone RP11-112K13 on chromosome Xq26.1-26.3,
              complete sequence
          Length = 162739

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 533    agaaatggttaagctgctgt 552
              ||||||||||||||||||||
Sbjct: 118911 agaaatggttaagctgctgt 118892
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>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 174    gtgccgtcggtgacggagct 193
              ||||||||||||||||||||
Sbjct: 157550 gtgccgtcggtgacggagct 157569
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>emb|AL031279.1|HS163O16 Human DNA sequence from clone RP1-163O16 on chromosome 1p35.1-36.13
            Contains CA repeat, STS, complete sequence
          Length = 135628

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 76   ttatcccgttcctgagggga 95
            ||||||||||||||||||||
Sbjct: 7692 ttatcccgttcctgagggga 7673
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>emb|CR450848.13| Zebrafish DNA sequence from clone CH211-149E23 in linkage group 15,
            complete sequence
          Length = 191457

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 450  atgatgaagcagccaattgg 469
            ||||||||||||||||||||
Sbjct: 5616 atgatgaagcagccaattgg 5635
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>gb|AC087852.11| Oryza sativa chromosome 3 BAC OJ1124_H03 genomic sequence, complete
              sequence
          Length = 149380

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 37     ccgccggtggccgcggcgct 56
              ||||||||||||||||||||
Sbjct: 127811 ccgccggtggccgcggcgct 127830
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>gb|AC096629.11| Bos taurus clone rp42-152a4, complete sequence
          Length = 191756

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 528    aagatagaaatggttaagct 547
              ||||||||||||||||||||
Sbjct: 132190 aagatagaaatggttaagct 132171



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 528   aagatagaaatggttaagct 547
             ||||||||||||||||||||
Sbjct: 28502 aagatagaaatggttaagct 28521
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>gb|AC092858.21| Bos taurus clone rp42-147e22, complete sequence
          Length = 165590

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 528   aagatagaaatggttaagct 547
             ||||||||||||||||||||
Sbjct: 79689 aagatagaaatggttaagct 79708
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>gb|AC098686.11| Bos taurus clone rp42-146c17, complete sequence
          Length = 164686

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 528   aagatagaaatggttaagct 547
             ||||||||||||||||||||
Sbjct: 93031 aagatagaaatggttaagct 93012
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>gb|AC007119.6| Arabidopsis thaliana chromosome 2 clone F2G1 map mi238, complete
             sequence
          Length = 54433

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 340   tcaaaattccaattttcacactct 363
             ||||||||| ||||||||||||||
Sbjct: 28827 tcaaaattctaattttcacactct 28850
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>gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome
          Length = 3544738

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 568     aaccaatggaagagattgcc 587
               ||||||||||||||||||||
Sbjct: 1520820 aaccaatggaagagattgcc 1520801
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>gb|AC146538.2| Gasterosteus aculeatus clone CH213-118G22, complete sequence
          Length = 211945

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 37    ccgccggtggccgcggcgct 56
             ||||||||||||||||||||
Sbjct: 98485 ccgccggtggccgcggcgct 98466
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 350      aattttcacactctgtattg 369
                ||||||||||||||||||||
Sbjct: 10252611 aattttcacactctgtattg 10252592
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 35       ccccgccggtggccgcggcg 54
                ||||||||||||||||||||
Sbjct: 25737068 ccccgccggtggccgcggcg 25737087
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 37       ccgccggtggccgcggcgct 56
                ||||||||||||||||||||
Sbjct: 30440626 ccgccggtggccgcggcgct 30440607
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 198      ctcgccgagttcctctacct 217
                ||||||||||||||||||||
Sbjct: 18865881 ctcgccgagttcctctacct 18865862
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>dbj|AP004650.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1540_G08
          Length = 126263

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 350   aattttcacactctgtattg 369
             ||||||||||||||||||||
Sbjct: 58634 aattttcacactctgtattg 58615
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>emb|BX255930.3| Zebrafish DNA sequence from clone DKEY-101K6 in linkage group 9, complete
              sequence
          Length = 185559

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 285    gagaaattgggttacgagac 304
              ||||||||||||||||||||
Sbjct: 160133 gagaaattgggttacgagac 160114
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>dbj|AP005845.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0461D06
          Length = 112895

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 198   ctcgccgagttcctctacct 217
             ||||||||||||||||||||
Sbjct: 29414 ctcgccgagttcctctacct 29395
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>dbj|AP004341.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0524E08
          Length = 154696

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    ccccgccggtggccgcggcg 54
             ||||||||||||||||||||
Sbjct: 54230 ccccgccggtggccgcggcg 54249
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>dbj|AK110860.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-172-D05, full
            insert sequence
          Length = 1629

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 350  aattttcacactctgtattg 369
            ||||||||||||||||||||
Sbjct: 1271 aattttcacactctgtattg 1252
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>dbj|AK106353.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-A02, full
            insert sequence
          Length = 2581

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 198  ctcgccgagttcctctacct 217
            ||||||||||||||||||||
Sbjct: 1645 ctcgccgagttcctctacct 1664
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>dbj|AK103285.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033124M20, full
           insert sequence
          Length = 812

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 35  ccccgccggtggccgcggcg 54
           ||||||||||||||||||||
Sbjct: 153 ccccgccggtggccgcggcg 172
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>dbj|AK069142.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008N22, full
           insert sequence
          Length = 1077

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 35  ccccgccggtggccgcggcg 54
           ||||||||||||||||||||
Sbjct: 259 ccccgccggtggccgcggcg 278
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>dbj|AK058506.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-G01, full
           insert sequence
          Length = 877

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 35  ccccgccggtggccgcggcg 54
           ||||||||||||||||||||
Sbjct: 231 ccccgccggtggccgcggcg 250
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>emb|BX465861.7| Human DNA sequence from clone CTD-2314C7 on chromosome 4, complete
            sequence
          Length = 23118

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 539  ggttaagctgctgtcaagac 558
            ||||||||||||||||||||
Sbjct: 5756 ggttaagctgctgtcaagac 5775


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,652,134
Number of Sequences: 3902068
Number of extensions: 4652134
Number of successful extensions: 84853
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 84329
Number of HSP's gapped (non-prelim): 512
length of query: 597
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 574
effective length of database: 17,143,297,704
effective search space: 9840252882096
effective search space used: 9840252882096
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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