ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal36f20 |
|---|---|
| Clone Library Name | barley_pub |
>MT1_WHEAT (P43400) Metallothionein-like protein 1 (MT-1)| Length = 75 Score = 98.6 bits (244), Expect = 8e-21 Identities = 47/49 (95%), Positives = 48/49 (97%) Frame = -2 Query: 379 KMYPDLTEQGSATAQVAAVVVLGMAPENKAGQFEVAAGQSGEGCSCGDN 233 KMYPDLTEQGSA AQVAAVVVLG+APENKAGQFEVAAGQSGEGCSCGDN Sbjct: 19 KMYPDLTEQGSAAAQVAAVVVLGVAPENKAGQFEVAAGQSGEGCSCGDN 67
>MT1_FESRU (O24528) Metallothionein-like protein 1 (MT-1)| Length = 70 Score = 63.2 bits (152), Expect = 4e-10 Identities = 34/49 (69%), Positives = 37/49 (75%) Frame = -2 Query: 379 KMYPDLTEQGSATAQVAAVVVLGMAPENKAGQFEVAAGQSGEGCSCGDN 233 KMYPDL EQ S T Q AVVV+G+A ENKAGQFE+A SGEGC CG N Sbjct: 19 KMYPDLDEQASTTTQ--AVVVVGVAHENKAGQFEMA---SGEGCKCGAN 62
>MT1_ORYSA (Q40633) Metallothionein-like protein 1| Length = 74 Score = 54.3 bits (129), Expect = 2e-07 Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 2/51 (3%) Frame = -2 Query: 379 KMYPDLTEQGSATAQVAAVVVLGMAPENKAGQFEVAA--GQSGEGCSCGDN 233 K YPDL E+ S+T A VVLG+APE KA QFE AA G++ GCSCG + Sbjct: 19 KKYPDLEEKSSSTK---ATVVLGVAPEKKAQQFEAAAESGETAHGCSCGSS 66
>MT1_HORVU (P26571) Metallothionein-like protein 1 (MT-1)| Length = 74 Score = 45.1 bits (105), Expect = 1e-04 Identities = 27/51 (52%), Positives = 33/51 (64%), Gaps = 2/51 (3%) Frame = -2 Query: 379 KMYPDLTEQGSATAQVAAVVVLGMAPENKAGQFEVAA--GQSGEGCSCGDN 233 KMYPDL E+ AT QV V+VLG+ + QFE AA G++ GCSCG N Sbjct: 19 KMYPDLEEKSGATMQV-TVIVLGVG--SAKVQFEEAAEFGEAAHGCSCGAN 66
>MT1_MAIZE (P30571) Metallothionein-like protein 1 (MT-1)| Length = 76 Score = 43.5 bits (101), Expect = 3e-04 Identities = 27/51 (52%), Positives = 31/51 (60%), Gaps = 4/51 (7%) Frame = -2 Query: 379 KMYPDLTEQGSATAQVAAVVVLGMAPENKAG-QFEVAAGQSGE---GCSCG 239 K YPDL E +A VVLG+APE KA +F AA +SGE GCSCG Sbjct: 19 KKYPDLEETSTAAQPT---VVLGVAPEKKAAPEFVEAAAESGEAAHGCSCG 66
>MT2_NICPL (Q40410) Metallothionein-like protein type 2| Length = 74 Score = 35.8 bits (81), Expect = 0.064 Identities = 17/48 (35%), Positives = 24/48 (50%) Frame = -2 Query: 376 MYPDLTEQGSATAQVAAVVVLGMAPENKAGQFEVAAGQSGEGCSCGDN 233 MYPDL + + T ++ G+AP N + A + G GC CG N Sbjct: 25 MYPDLEKSTTFT------IIQGVAPMNNFEELGEKAAEGGNGCKCGSN 66
>MT2A_LYCES (Q40157) Metallothionein-like protein type 2 A (LeMT(A))| Length = 72 Score = 35.4 bits (80), Expect = 0.084 Identities = 19/48 (39%), Positives = 26/48 (54%) Frame = -2 Query: 376 MYPDLTEQGSATAQVAAVVVLGMAPENKAGQFEVAAGQSGEGCSCGDN 233 MYPD+ + + T ++ G+AP N G E A +GEGC CG N Sbjct: 25 MYPDMEKSTTFT------IIEGVAPINNYGNVEEKA--AGEGCKCGSN 64
>MT21_ORYSA (P94029) Metallothionein-like protein type 2| Length = 82 Score = 34.7 bits (78), Expect = 0.14 Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 4/53 (7%) Frame = -2 Query: 379 KMYPDLTEQGSATAQVAAVVVLGMAPEN---KAGQFEVAAGQSGE-GCSCGDN 233 KMYP++ E+ + T V++G+AP + + AAG E GC CGDN Sbjct: 24 KMYPEMAEEVTTTQ----TVIMGVAPSKGHAEGLEAGAAAGAGAENGCKCGDN 72
>MT2_MUSAC (O22319) Metallothionein-like protein type 2| Length = 78 Score = 34.3 bits (77), Expect = 0.19 Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 3/52 (5%) Frame = -2 Query: 379 KMYPDLTEQGSATAQVAAVVVLGMAPENKAGQFE---VAAGQSGEGCSCGDN 233 +M DL E+ S+T+Q +++G+AP+ G FE AAG S GC CG N Sbjct: 24 RMLTDLGEERSSTSQT---MIMGVAPQK--GHFEELETAAG-SDNGCKCGSN 69
>MT2_RICCO (P30564) Metallothionein-like protein type 2| Length = 80 Score = 33.9 bits (76), Expect = 0.24 Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 3/52 (5%) Frame = -2 Query: 379 KMYPDLTEQGSATAQVAAVVVLGMAPEN---KAGQFEVAAGQSGEGCSCGDN 233 KMYPD++ T + +VLG+ E + G+ V + G GC CGDN Sbjct: 24 KMYPDMSFSEKTTTE---TLVLGVGAEKAHFEGGEMGVVGAEEG-GCKCGDN 71
>MT2X_LYCES (Q43512) Metallothionein-like protein type 2| Length = 72 Score = 33.9 bits (76), Expect = 0.24 Identities = 18/48 (37%), Positives = 27/48 (56%) Frame = -2 Query: 376 MYPDLTEQGSATAQVAAVVVLGMAPENKAGQFEVAAGQSGEGCSCGDN 233 MYPD+ + + + +V G+AP + G+ E A +GEGC CG N Sbjct: 25 MYPDMEKSATFS------IVEGVAPVHNYGRVEEKA--AGEGCKCGSN 64
>MT2Z_LYCES (Q43515) Metallothionein-like protein type 2| Length = 84 Score = 33.1 bits (74), Expect = 0.41 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 3/51 (5%) Frame = -2 Query: 376 MYPDLTEQGSATAQVAAVVVLGMAPENKAGQFEVA---AGQSGEGCSCGDN 233 MYPDL + + T ++ G+AP N G E + A + G GC CG + Sbjct: 24 MYPDLEKSTTLT------IIEGVAPMNNKGMVEGSIEKATEGGNGCKCGSS 68
>MT25_BRAJU (P56172) Metallothionein-like protein type 2, MT2-28| Length = 80 Score = 32.7 bits (73), Expect = 0.54 Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 4/53 (7%) Frame = -2 Query: 379 KMYPDLTEQGSATAQVAAVVVLGMAPENKAGQFEVAAGQS----GEGCSCGDN 233 KMYPDL+ G T +VLG+AP + QFE A+G++ + C CG + Sbjct: 23 KMYPDLSFSGETT--TTETLVLGLAPAMNS-QFE-ASGETFVAENDACKCGSD 71
>MT23_BRAJU (P56170) Metallothionein-like protein type 2, MT2-22| Length = 80 Score = 32.7 bits (73), Expect = 0.54 Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 4/53 (7%) Frame = -2 Query: 379 KMYPDLTEQGSATAQVAAVVVLGMAPENKAGQFEVAAGQS----GEGCSCGDN 233 KMYPDL+ G T A +VLG+AP + Q+E A+G++ + C CG + Sbjct: 23 KMYPDLSFSGETTTSEA--LVLGVAPSMNS-QYE-ASGETFVAENDACKCGSD 71
>MT21_BRAJU (P56168) Metallothionein-like protein type 2, MT2-4/MT2-25| Length = 80 Score = 32.3 bits (72), Expect = 0.71 Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 4/53 (7%) Frame = -2 Query: 379 KMYPDLTEQGSATAQVAAVVVLGMAPENKAGQFEVAAGQS----GEGCSCGDN 233 KMYPDL+ G T +VLG+AP + QFE A+G++ + C CG + Sbjct: 23 KMYPDLSFSGETT--TTETLVLGVAPAMNS-QFE-ASGETFVAENDACKCGSD 71
>MT2B_LYCES (Q40158) Metallothionein-like protein type 2 B| Length = 82 Score = 32.0 bits (71), Expect = 0.92 Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 2/51 (3%) Frame = -2 Query: 379 KMYPDLTEQGSATAQVAAVVVLGMAPENKA-GQFEVAAGQSGE-GCSCGDN 233 KMYPD++ S+T +VLG+ PE + G E+ E GC CG + Sbjct: 24 KMYPDMSYTESST--TTETLVLGVGPEKTSFGAMEMGESPVAENGCKCGSD 72
>MT2A_ARATH (P25860) Metallothionein-like protein 2A (MT-2A) (MT-K) (MT-1G)| Length = 81 Score = 32.0 bits (71), Expect = 0.92 Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 4/53 (7%) Frame = -2 Query: 379 KMYPDLTEQGSATAQVAAVVVLGMAPENKAGQFEVAAGQS----GEGCSCGDN 233 KMYPDL G T VLG+AP K Q+E A+G+S + C CG + Sbjct: 24 KMYPDLGFSGETT--TTETFVLGVAPAMK-NQYE-ASGESNNAENDACKCGSD 72
>MT2Y_LYCES (Q43513) Metallothionein-like protein type 2| Length = 73 Score = 31.6 bits (70), Expect = 1.2 Identities = 18/48 (37%), Positives = 23/48 (47%) Frame = -2 Query: 376 MYPDLTEQGSATAQVAAVVVLGMAPENKAGQFEVAAGQSGEGCSCGDN 233 MYPDL + T ++ G+AP G E A + G GC CG N Sbjct: 25 MYPDLESTTTFT------IIEGVAPMKNYGVAEKAT-EGGNGCKCGSN 65
>MT1_COFAR (P43396) Metallothionein-like protein 1 (MT-1)| Length = 80 Score = 31.2 bits (69), Expect = 1.6 Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 3/50 (6%) Frame = -2 Query: 379 KMYPDLTEQGSATAQVAAVVVLGMAPENKA---GQFEVAAGQSGEGCSCG 239 KMYP+L+ + A+ ++LG+AP G E AA ++G GC CG Sbjct: 24 KMYPELSYTENTAAE---TLILGVAPPKTTYLEGAGEEAAAENG-GCKCG 69
>MT2_NICGU (Q40396) Metallothionein-like protein type 2| Length = 78 Score = 30.8 bits (68), Expect = 2.1 Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 2/49 (4%) Frame = -2 Query: 379 KMYPDLTEQGSATAQVAAVVVLGMAPENKA-GQFEVAAGQSGE-GCSCG 239 KMYPDL+ S T + +VLG+ E + G E+ + E GC CG Sbjct: 21 KMYPDLSYNESTTTE---TLVLGVGHEKTSFGTMEMGESPAAENGCKCG 66
>MT2_CICAR (Q39459) Metallothionein-like protein 2 (MT-2)| Length = 79 Score = 30.8 bits (68), Expect = 2.1 Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 3/52 (5%) Frame = -2 Query: 379 KMYPDLTEQGSATAQVAAVVVLGMAPENKAGQFEVAA---GQSGEGCSCGDN 233 KMYPD++ T++ +V+G+A QFE A G +GC CG N Sbjct: 24 KMYPDMSYTEQTTSET---LVMGVASGKT--QFEGAEMGFGAENDGCKCGSN 70
>MT2_VICFA (Q41657) Metallothionein-like protein type 2| Length = 77 Score = 30.4 bits (67), Expect = 2.7 Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%) Frame = -2 Query: 379 KMYPDLTEQGSATAQVAAVVVLGMAPENKAGQFEVAA-GQSGEGCSCGDN 233 KMY DL+ S T++ +++G+ E Q+E A G +GC CG N Sbjct: 24 KMYADLSYTESTTSET---LIMGVGSEK--AQYESAEMGAENDGCKCGAN 68
>MT2_MALDO (O24058) Metallothionein-like protein type 2| Length = 79 Score = 30.4 bits (67), Expect = 2.7 Identities = 15/48 (31%), Positives = 24/48 (50%) Frame = -2 Query: 376 MYPDLTEQGSATAQVAAVVVLGMAPENKAGQFEVAAGQSGEGCSCGDN 233 M PDL+ +T + +V+G+AP+ + + GC CGDN Sbjct: 26 MAPDLSYMEGSTTET---LVMGVAPQKSHMEASEMGVAAENGCKCGDN 70
>MT1_MIMGU (P20238) Metallothionein-like protein 1 (MT-1)| Length = 72 Score = 30.0 bits (66), Expect = 3.5 Identities = 16/48 (33%), Positives = 20/48 (41%) Frame = -2 Query: 376 MYPDLTEQGSATAQVAAVVVLGMAPENKAGQFEVAAGQSGEGCSCGDN 233 MYPD+ E + + V L M E F + G GC CG N Sbjct: 21 MYPDM-ETNTTVTMIEGVAPLKMYSEGSEKSF---GAEGGNGCKCGSN 64
>MT2_BRARP (Q39269) Metallothionein-like protein BIF98| Length = 80 Score = 29.6 bits (65), Expect = 4.6 Identities = 22/55 (40%), Positives = 26/55 (47%), Gaps = 6/55 (10%) Frame = -2 Query: 379 KMYPDLTEQGSATAQVAAVVVLGMAPENKAGQFEVAAGQSGEG------CSCGDN 233 KMYPDL G +T V G+AP K Q+E SGEG C CG + Sbjct: 24 KMYPDLGFSGEST--TTETFVFGVAPAMK-NQYEA----SGEGVAENDRCKCGSD 71
>MT2_BRARA (P69164) Metallothionein-like protein type 2| Length = 80 Score = 29.6 bits (65), Expect = 4.6 Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 3/52 (5%) Frame = -2 Query: 379 KMYPDLTEQGSATAQVAAVVVLGMAPENKAGQFEVAAGQ---SGEGCSCGDN 233 KMYPDL G +T V G+AP K Q+E A+G+ + C CG + Sbjct: 24 KMYPDLGFSGEST--TTETFVFGVAPAMK-NQYE-ASGEGVAENDACKCGSD 71
>MT22_BRAJU (P69163) Metallothionein-like protein type 2, MT2-18| Length = 80 Score = 29.6 bits (65), Expect = 4.6 Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 3/52 (5%) Frame = -2 Query: 379 KMYPDLTEQGSATAQVAAVVVLGMAPENKAGQFEVAAGQ---SGEGCSCGDN 233 KMYPDL G +T V G+AP K Q+E A+G+ + C CG + Sbjct: 24 KMYPDLGFSGEST--TTETFVFGVAPAMK-NQYE-ASGEGVAENDACKCGSD 71 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 44,623,539 Number of Sequences: 219361 Number of extensions: 545750 Number of successful extensions: 1533 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 1486 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1521 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3465624120 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
