>HYPA_CLOPE (Q46205) Protein hypA|
          Length = 973

 Score =  104 bits (259), Expect = 2e-22
 Identities = 57/178 (32%), Positives = 88/178 (49%)
 Frame = +2

Query: 77   NEAIVIPTQVNYVGKAGNLYQSGYQLNGSAYVISKHISNTWLWDRVRVSGGAYGGFCDFD 256
            NE ++    V YV K GN    GY+ +G+  ++   +   +LW+ VRV GGAYG F +F 
Sbjct: 783  NEGLLTQGNVQYVAKGGNYKTHGYKYSGALSLLESILGFDYLWNAVRVKGGAYGVFSNFR 842

Query: 257  THSGVFSYLSYRDPNLLKTLEVYDGTAKFLRELEVDDDALTKAIIGTIGDVDSYQLPDAK 436
               G +  +SYRDPN+  TLE YD   K+L + E D+  +TK IIGTI   D       K
Sbjct: 843  RDGGAY-IVSYRDPNIKSTLEAYDNIPKYLNDFEADEREMTKYIIGTIRKYDQPISNGIK 901

Query: 437  GYSSLMRYLLGITXXXXXXXXXXILATSVKDFKEFADAVETINDNGVVVAVASPDDVE 610
            G  ++  YL   T          I+   V+  K FA  ++ +     +  + + + ++
Sbjct: 902  GDIAVSYYLSNFTYEDLQKEREEIINADVEKIKSFAPMIKDLMKEDYICVLGNEEKIK 959

>YD430_YEAST (P32898) Hypothetical 112.2 kDa protein in TIF35-NPL3 intergenic|
            region (ORF1)
          Length = 989

 Score = 63.9 bits (154), Expect = 4e-10
 Identities = 52/199 (26%), Positives = 87/199 (43%), Gaps = 6/199 (3%)
 Frame = +2

Query: 11   LDALPSAPSLGSDPWLSRLPSVNEA-----IVIPTQVNYVGKAGNLYQSGYQLNGSAYVI 175
            ++ LP    L + P  S  P +        I  P QV+Y  +A       ++   +  V+
Sbjct: 777  MERLPHGSCLPNGPKTSDYPLIGSKCKHTLIKFPFQVHYTSQALLGVPYTHKDGSALQVM 836

Query: 176  SKHISNTWLWDRVRVSGGAYGGFCDFDTHSGVFSYLSYRDPNLLKTLEVYDGTAKF-LRE 352
            S  ++   L   VR  GGAYGG   +   +G+FS+ SYRDP  LK+LE +  + ++ L +
Sbjct: 837  SNMLTFKHLHREVREKGGAYGGGASYSALAGIFSFYSYRDPQPLKSLETFKNSGRYILND 896

Query: 353  LEVDDDALTKAIIGTIGDVDSYQLPDAKGYSSLMRYLLGITXXXXXXXXXXILATSVKDF 532
             +     L +A +     VD+ + P  +G +  M    G+T          +L  S+ D 
Sbjct: 897  AKWGVTDLDEAKLTIFQQVDAPKSPKGEGVTYFMS---GVTDDMKQARREQLLDVSLLDV 953

Query: 533  KEFADAVETINDNGVVVAV 589
               A+    +N  GV   +
Sbjct: 954  HRVAEKY-LLNKEGVSTVI 971

>Y228_BORBU (O51246) Hypothetical protein BB0228|
          Length = 971

 Score = 63.5 bits (153), Expect = 5e-10
 Identities = 40/163 (24%), Positives = 74/163 (45%)
 Frame = +2

Query: 71   SVNEAIVIPTQVNYVGKAGNLYQSGYQLNGSAYVISKHISNTWLWDRVRVSGGAYGGFCD 250
            ++ E I+I ++V +       Y+   +    A  +   + +   W+++RV GGAYG    
Sbjct: 773  ALREIIIIQSKVAFNAICFPSYKINDENYPKANFLEHVLRSGIFWEKIRVMGGAYGASAS 832

Query: 251  FDTHSGVFSYLSYRDPNLLKTLEVYDGTAKFLRELEVDDDALTKAIIGTIGDVDSYQLPD 430
                +G+FS+ SYRDPN  KT + ++ + + L   ++ DD +   +IG IG     +   
Sbjct: 833  IA--NGIFSFASYRDPNFTKTYQAFEKSLEELANNKMTDDEIYTYLIGLIGTNIYVKTKA 890

Query: 431  AKGYSSLMRYLLGITXXXXXXXXXXILATSVKDFKEFADAVET 559
             +   S  R +L I+              + +D KE +  + T
Sbjct: 891  TEALQSYRRKMLNISDSLRQDIRNAYFTITPQDIKEISTKILT 933

>YBAH_SCHPO (O42908) Hypothetical protein C119.17 in chromosome II|
          Length = 882

 Score = 34.3 bits (77), Expect = 0.30
 Identities = 14/42 (33%), Positives = 24/42 (57%)
 Frame = +2

Query: 170 VISKHISNTWLWDRVRVSGGAYGGFCDFDTHSGVFSYLSYRD 295
           ++S  +++ +L   +R  GGAYG    +    GV S+ +YRD
Sbjct: 838 ILSSLLTHKYLHGEIREKGGAYGAGLSYSGIDGVLSFFTYRD 879

>HAT2_CANAL (Q59RH5) Histone acetyltransferase type B subunit 2 (EC 2.3.1.48)|
          Length = 382

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
 Frame = +2

Query: 293 DPNL-----LKTLEVYDGTAKFLRELEVDDDALTKAIIGTIGDVDSYQLPDAKGYS 445
           DPN+     +KT++  +  A+  R   +  DA   A I  +G+VD Y L     YS
Sbjct: 82  DPNVKANSKIKTVQKLENNAEICRARYMPQDANIVATINGLGEVDLYNLDTETRYS 137

>GLSA_COREF (Q8FMX4) Glutaminase (EC 3.5.1.2)|
          Length = 423

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 23/111 (20%), Positives = 47/111 (42%), Gaps = 8/111 (7%)
 Frame = +2

Query: 299 NLLKTLEVYDGTAKFLRELEVDDDALTKAIIGTI---GDVDSYQLPDAKGYSSLMRYLLG 469
           N ++ +E++   ++ +    +  + LT+  +  I   GD    QL  A  +S+   +L  
Sbjct: 292 NPVRGVEIFKALSEDMGLHLMSAELLTQHAVRAIEERGDTTVIQLQGAMNFSAAENFLFT 351

Query: 470 ITXXXXXXXXXXILATSVKDFKEFA-----DAVETINDNGVVVAVASPDDV 607
           +T          +  + V  F+        + +  I DNG  VA+  P+D+
Sbjct: 352 VTDHDFTGEKVVLDISRVPMFRPMGRRLVKEGLRRIRDNGFKVAIYDPEDI 402

>CDON_RAT (O35158) Cell adhesion molecule-related/down-regulated by oncogenes|
            precursor
          Length = 1256

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 19/59 (32%), Positives = 29/59 (49%)
 Frame = +2

Query: 125  GNLYQSGYQLNGSAYVISKHISNTWLWDRVRVSGGAYGGFCDFDTHSGVFSYLSYRDPN 301
            G LYQ G ++NG        +  T L    R++G  +GGF    + S   S+L ++ PN
Sbjct: 1001 GYLYQ-GSEINGQM------VEYTTLSGTARINGSVHGGFLSKGSLSNGCSHLHHKGPN 1052

>Y1500_CLOTE (Q894N6) UPF0145 protein CTC_01500|
          Length = 106

 Score = 29.3 bits (64), Expect = 9.8
 Identities = 16/50 (32%), Positives = 27/50 (54%)
 Frame = +2

Query: 269 VFSYLSYRDPNLLKTLEVYDGTAKFLRELEVDDDALTKAIIGTIGDVDSY 418
           + S LSY D   L+T+ + +G   F + +  D  A  K ++G  G++ SY
Sbjct: 2   ILSNLSYIDNKELETINIVEGVCVFSKNVGKDIMASFKNVVG--GEIKSY 49

>DLX5_CHICK (P50577) Homeobox protein DLX-5 (cDlx)|
          Length = 286

 Score = 29.3 bits (64), Expect = 9.8
 Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
 Frame = +2

Query: 20  LPSAPSLGSDPWLSRLPSVNEAIVIPTQVNYVGKAGNLYQSGYQLNGSAYVI-SKHISNT 196
           LP + +  SD + S   +       PT  +Y GKA N YQ  Y +NGSA    +K  ++ 
Sbjct: 37  LPESSATDSD-YYSPTGAAPHGYCSPTSASY-GKALNPYQYQYGMNGSAGTYPAKAYADY 94

Query: 197 WLWDRVRVSGGAYG 238
                    GGAYG
Sbjct: 95  GYGSPYHQYGGAYG 108


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,705,623
Number of Sequences: 219361
Number of extensions: 1966011
Number of successful extensions: 5202
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5075
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5200
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5653129581
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)