ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal36f15
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY105969.1| Zea mays PCO131995 mRNA sequence 620 e-174
2ref|XM_467920.1| Oryza sativa (japonica cultivar-group), mRNA 309 6e-81
3dbj|AK060417.1| Oryza sativa (japonica cultivar-group) cDNA clon... 309 6e-81
4dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 252 1e-63
5dbj|AP005002.3| Oryza sativa (japonica cultivar-group) genomic D... 252 1e-63
6ref|NM_112804.3| Arabidopsis thaliana ATPREP1/ATZNMP; metalloend... 101 3e-18
7gb|AY091051.1| Arabidopsis thaliana putative metalloprotease (At... 101 3e-18
8gb|AY090240.1| Arabidopsis thaliana AT3g19170/MVI11_8 mRNA, comp... 101 3e-18
9gb|BT006362.1| Arabidopsis thaliana At3g19170/MVI11_8 gene, comp... 101 3e-18
10gb|BT002372.1| Arabidopsis thaliana clone U19043 putative metall... 101 3e-18
11dbj|AP000419.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 82 2e-12
12ref|NM_180631.1| Arabidopsis thaliana ATPREP2; metalloendopeptid... 74 6e-10
13ref|NM_180630.1| Arabidopsis thaliana ATPREP2; metalloendopeptid... 74 6e-10
14ref|NM_103851.3| Arabidopsis thaliana ATPREP2; metalloendopeptid... 74 6e-10
15gb|AY074305.1| Arabidopsis thaliana putative hydrogenase protein... 74 6e-10
16gb|BT004376.1| Arabidopsis thaliana clone U19879 putative hydrog... 74 6e-10
17gb|AC011807.4|AC011807 Arabidopsis thaliana chromosome I BAC F14... 74 6e-10
18gb|AF326573.1| Dengue virus type 4 strain 814669, complete genome 44 0.54
19gb|AY243469.1| Chimeric Dengue virus vector p4(Delta30)-D2-CME, ... 44 0.54
20gb|AY243468.1| Chimeric Dengue virus vector p4-D2-CME, complete ... 44 0.54
21gb|AY243467.1| Chimeric Dengue virus vector p4(Delta30)-D2-ME, c... 44 0.54
22gb|AY243466.1| Chimeric Dengue virus vector p4-D2-ME, complete s... 44 0.54
23gb|AY376438.1| Dengue virus vector p4(Delta30), complete sequence 44 0.54
24gb|AF375822.1|AF375822 Dengue virus type 4 recombinant clone 2A,... 44 0.54
25gb|AF326827.1| Dengue virus type 4 recombinant clone rDEN4del30,... 44 0.54
26gb|AF326826.1| Dengue virus type 4 recombinant clone 2Adel30, co... 44 0.54
27gb|AF326825.1| Dengue virus type 4 recombinant clone rDEN4, comp... 44 0.54
28gb|AF289029.1|AF289029 dengue virus type 4 China Guangzhou B5 st... 44 0.54
29gb|AY947539.1| Dengue virus type 4 strain H241, complete genome 44 0.54
30gb|M14931.2|DENSTRA Dengue virus type 4 polyprotein precursor, g... 44 0.54
31gb|AY776330.1| Dengue virus type 4 strain Taiwan-2K0713 polyprot... 44 0.54
32gb|AY618993.1| Dengue virus type 4 strain ThD4_0734_00, complete... 44 0.54
33gb|AY618992.1| Dengue virus type 4 strain ThD4_0485_01, complete... 44 0.54
34gb|AY618991.1| Dengue virus type 4 strain ThD4_0087_77, complete... 44 0.54
35gb|AY618990.1| Dengue virus type 4 strain ThD4_0348_91, complete... 44 0.54
36gb|AY858050.1| Dengue virus type 4 strain SW38i polyprotein gene... 44 0.54
37gb|AY858049.1| Dengue virus type 4 strain SW36i polyprotein gene... 44 0.54
38gb|AY656168.1| Chimeric dengue virus vector p4(delta30)-D3L-ME, ... 44 0.54
39gb|AY656167.1| Chimeric dengue virus vector p4-D3L-ME, complete ... 44 0.54
40gb|AY648301.1| Dengue virus type 4 vector p4, complete sequence 44 0.54
41gb|AC102103.10| Mus musculus chromosome 15, clone RP23-82K1, com... 40 8.5
42gb|BC036982.1| Mus musculus thyrotroph embryonic factor, transcr... 40 8.5
43gb|BC017689.1| Mus musculus thyrotroph embryonic factor, transcr... 40 8.5
44ref|NM_153484.1| Mus musculus thyrotroph embryonic factor (Tef),... 40 8.5
45ref|NM_017376.2| Mus musculus thyrotroph embryonic factor (Tef),... 40 8.5
46gb|AY540631.1| Mus musculus thyrotroph embryonic factor alpha is... 40 8.5
47gb|AC005486.2| Homo sapiens PAC clone RP5-1070G24 from 7, comple... 40 8.5
48gb|AC132339.3| Mus musculus BAC clone RP24-165O21 from chromosom... 40 8.5
49gb|AC122232.3| Mus musculus BAC clone RP23-136G1 from chromosome... 40 8.5
50gb|AC004413.2| Homo sapiens PAC clone RP4-650P9 from 7, complete... 40 8.5
51gb|CP000243.1| Escherichia coli UTI89, complete genome 40 8.5
52emb|BX119976.8| Zebrafish DNA sequence from clone CH211-196F5 in... 40 8.5
53gb|AC144535.4| Homo sapiens 12 BAC RP11-191K23 (Roswell Park Can... 40 8.5
54dbj|AK141606.1| Mus musculus adult male hippocampus cDNA, RIKEN ... 40 8.5
55dbj|AK147965.1| Mus musculus melanocyte cDNA, RIKEN full-length ... 40 8.5
56dbj|AK154472.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 40 8.5
57gb|AC158970.3| Mus musculus chromosome 15, clone RP24-186A9, com... 40 8.5
58dbj|AK009518.1| Mus musculus adult male tongue cDNA, RIKEN full-... 40 8.5
59gb|BC023410.1| Mus musculus thyrotroph embryonic factor, mRNA (c... 40 8.5
60dbj|AK010205.1| Mus musculus adult male tongue cDNA, RIKEN full-... 40 8.5
61dbj|AK042146.1| Mus musculus 3 days neonate thymus cDNA, RIKEN f... 40 8.5
62dbj|AK085437.1| Mus musculus 0 day neonate kidney cDNA, RIKEN fu... 40 8.5
63gb|BC094169.1| Xenopus laevis cDNA clone MGC:115330 IMAGE:694890... 40 8.5
64gb|AC129207.4| Mus musculus chromosome 5 clone RP24-280N5, compl... 40 8.5 
>gb|AY105969.1| Zea mays PCO131995 mRNA sequence
          Length = 1779

 Score =  620 bits (313), Expect = e-174
 Identities = 508/573 (88%)
 Strand = Plus / Plus

                                                                        
Query: 10   tcttgatgcactcccaagtgccccatccctgggaagtgatccatggctctctcgattgcc 69
            ||||||| |||||||||||  ||||||| | ||||||||||||||||| |||||  | ||
Sbjct: 1085 tcttgattcactcccaagtagcccatccattggaagtgatccatggctttctcgtctacc 1144

                                                                        
Query: 70   ttctgttaatgaagccattgttatccctacacaggttaattatgttggaaaagctggaaa 129
            |||||| ||||||||||||||| |||| || |||||||||||||||||||||||||||||
Sbjct: 1145 ttctgtgaatgaagccattgttgtcccaactcaggttaattatgttggaaaagctggaaa 1204

                                                                        
Query: 130  cctataccaaagtggataccagctcaatggaagtgcctatgtcatatccaagcacataag 189
            ||| ||||||||||||||||||||||||||||| ||||||||||| || |||||||||||
Sbjct: 1205 cctttaccaaagtggataccagctcaatggaagcgcctatgtcatctcaaagcacataag 1264

                                                                        
Query: 190  caacacatggttatgggaccgcgttcgagttagtggtggagcatatggagggttttgtga 249
            ||| |||||||||||||| || ||||||||||| ||||| ||||||||||| ||||||||
Sbjct: 1265 caatacatggttatgggatcgtgttcgagttagcggtggtgcatatggaggattttgtga 1324

                                                                        
Query: 250  ttttgacactcattcaggtgtcttttcctatttgtcataccgtgatccgaacttgctgaa 309
            ||||||||| |||||||| || || || ||||| ||||| |||||||| ||||| |||||
Sbjct: 1325 ttttgacacccattcaggagtgttctcatatttatcatatcgtgatccaaacttactgaa 1384

                                                                        
Query: 310  aacactagaggtctatgatgggactgcaaagttcctcagagaactagaggtagatgatga 369
            |||||||||||||||||||| ||| ||||  ||||||||||| |||||  | ||||||||
Sbjct: 1385 aacactagaggtctatgatgagacagcaagattcctcagagagctagaattggatgatga 1444

                                                                        
Query: 370  tgctctcacaaaagctattattggcaccataggggatgttgattcctatcagctaccaga 429
            ||| |||||||||||||||||||| |||||||| ||||||||  |||| |||||||||||
Sbjct: 1445 tgcactcacaaaagctattattggaaccataggcgatgttgacgcctaccagctaccaga 1504

                                                                        
Query: 430  tgctaaaggttacagcagtctgatgcggtatttgttgggcatcactgaggaggaacgcca 489
            |||||||||||||||||| || ||| | |||||| |||||||||| || |||||||||||
Sbjct: 1505 tgctaaaggttacagcagcctaatgagatatttgctgggcatcacggatgaggaacgcca 1564

                                                                        
Query: 490  gcaaaggcgtgaagagatactcgcaaccagcgtgaaggatttcaaggagtttgctgatgc 549
            |||||| |||||||||||||| ||||| |||  |||||||||||||||||| ||||||||
Sbjct: 1565 gcaaagacgtgaagagatactagcaacaagcccgaaggatttcaaggagttcgctgatgc 1624

                                             
Query: 550  cgtcgagacgatcaacgacaatggggttgtggt 582
             || || || ||||| ||||||||||| |||||
Sbjct: 1625 tgttgaaaccatcaaggacaatggggtcgtggt 1657
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>ref|XM_467920.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 675

 Score =  309 bits (156), Expect = 6e-81
 Identities = 276/316 (87%)
 Strand = Plus / Plus

                                                                       
Query: 306 tgaaaacactagaggtctatgatgggactgcaaagttcctcagagaactagaggtagatg 365
           ||||||||||||| || ||||||| ||| || |||||||| ||||| |||||  | ||||
Sbjct: 17  tgaaaacactagaagtttatgatgagacggccaagttcctaagagagctagaaatggatg 76

                                                                       
Query: 366 atgatgctctcacaaaagctattattggcaccataggggatgttgattcctatcagctac 425
           |||||  ||||||||||||||||||||| |||||||| || ||||||||||| ||||| |
Sbjct: 77  atgattgtctcacaaaagctattattggtaccataggtgacgttgattcctaccagctgc 136

                                                                       
Query: 426 cagatgctaaaggttacagcagtctgatgcggtatttgttgggcatcactgaggaggaac 485
           ||||||||||||||||||||||||| ||||| || ||| |||||||||| | ||||||||
Sbjct: 137 cagatgctaaaggttacagcagtctaatgcgatacttgctgggcatcacggtggaggaac 196

                                                                       
Query: 486 gccagcaaaggcgtgaagagatactcgcaaccagcgtgaaggatttcaaggagtttgctg 545
           |||||||||| ||||||||||||||  |||||||| ||||||||||||||||||||||||
Sbjct: 197 gccagcaaagacgtgaagagatactatcaaccagcttgaaggatttcaaggagtttgctg 256

                                                                       
Query: 546 atgccgtcgagacgatcaacgacaatggggttgtggtggctgtagcatcgcctgacgacg 605
           |||| ||||| || || |||||||| || || ||||| || || ||||| ||||| ||||
Sbjct: 257 atgctgtcgaaacaattaacgacaacggtgtcgtggttgccgttgcatcacctgaggacg 316

                           
Query: 606 tcgaggcagcaaacaa 621
           |||| |||||||||||
Sbjct: 317 tcgaagcagcaaacaa 332
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>dbj|AK060417.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-F01, full
           insert sequence
          Length = 675

 Score =  309 bits (156), Expect = 6e-81
 Identities = 276/316 (87%)
 Strand = Plus / Plus

                                                                       
Query: 306 tgaaaacactagaggtctatgatgggactgcaaagttcctcagagaactagaggtagatg 365
           ||||||||||||| || ||||||| ||| || |||||||| ||||| |||||  | ||||
Sbjct: 17  tgaaaacactagaagtttatgatgagacggccaagttcctaagagagctagaaatggatg 76

                                                                       
Query: 366 atgatgctctcacaaaagctattattggcaccataggggatgttgattcctatcagctac 425
           |||||  ||||||||||||||||||||| |||||||| || ||||||||||| ||||| |
Sbjct: 77  atgattgtctcacaaaagctattattggtaccataggtgacgttgattcctaccagctgc 136

                                                                       
Query: 426 cagatgctaaaggttacagcagtctgatgcggtatttgttgggcatcactgaggaggaac 485
           ||||||||||||||||||||||||| ||||| || ||| |||||||||| | ||||||||
Sbjct: 137 cagatgctaaaggttacagcagtctaatgcgatacttgctgggcatcacggtggaggaac 196

                                                                       
Query: 486 gccagcaaaggcgtgaagagatactcgcaaccagcgtgaaggatttcaaggagtttgctg 545
           |||||||||| ||||||||||||||  |||||||| ||||||||||||||||||||||||
Sbjct: 197 gccagcaaagacgtgaagagatactatcaaccagcttgaaggatttcaaggagtttgctg 256

                                                                       
Query: 546 atgccgtcgagacgatcaacgacaatggggttgtggtggctgtagcatcgcctgacgacg 605
           |||| ||||| || || |||||||| || || ||||| || || ||||| ||||| ||||
Sbjct: 257 atgctgtcgaaacaattaacgacaacggtgtcgtggttgccgttgcatcacctgaggacg 316

                           
Query: 606 tcgaggcagcaaacaa 621
           |||| |||||||||||
Sbjct: 317 tcgaagcagcaaacaa 332
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  252 bits (127), Expect = 1e-63
 Identities = 157/167 (94%)
 Strand = Plus / Plus

                                                                            
Query: 102      aggttaattatgttggaaaagctggaaacctataccaaagtggataccagctcaatggaa 161
                ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 32086509 aggttaattatgttggaaaagctggaaacctgtaccaaagtggatatcagctcaatggaa 32086568

                                                                            
Query: 162      gtgcctatgtcatatccaagcacataagcaacacatggttatgggaccgcgttcgagtta 221
                ||||||||||||| |||||||| |||||||| || ||||| |||||||| ||||||||||
Sbjct: 32086569 gtgcctatgtcatctccaagcatataagcaatacgtggttgtgggaccgtgttcgagtta 32086628

                                                               
Query: 222      gtggtggagcatatggagggttttgtgattttgacactcattcaggt 268
                ||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 32086629 gtggtggtgcatatggagggttttgtgattttgacacccattcaggt 32086675



 Score =  165 bits (83), Expect = 2e-37
 Identities = 146/167 (87%)
 Strand = Plus / Plus

                                                                            
Query: 281      ttgtcataccgtgatccgaacttgctgaaaacactagaggtctatgatgggactgcaaag 340
                ||||||||||||||||| || ||  ||||||||||||| || ||||||| ||| || |||
Sbjct: 32086806 ttgtcataccgtgatccaaatttattgaaaacactagaagtttatgatgagacggccaag 32086865

                                                                            
Query: 341      ttcctcagagaactagaggtagatgatgatgctctcacaaaagctattattggcaccata 400
                ||||| ||||| |||||  | |||||||||  ||||||||||||||||||||| ||||||
Sbjct: 32086866 ttcctaagagagctagaaatggatgatgattgtctcacaaaagctattattggtaccata 32086925

                                                               
Query: 401      ggggatgttgattcctatcagctaccagatgctaaaggttacagcag 447
                || || ||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 32086926 ggtgacgttgattcctaccagctgccagatgctaaaggttacagcag 32086972



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 91/105 (86%)
 Strand = Plus / Plus

                                                                            
Query: 517      cagcgtgaaggatttcaaggagtttgctgatgccgtcgagacgatcaacgacaatggggt 576
                |||| |||||||||||||||||||||||||||| ||||| || || |||||||| || ||
Sbjct: 32087470 cagcttgaaggatttcaaggagtttgctgatgctgtcgaaacaattaacgacaacggtgt 32087529

                                                             
Query: 577      tgtggtggctgtagcatcgcctgacgacgtcgaggcagcaaacaa 621
                 ||||| || || ||||| ||||| |||||||| |||||||||||
Sbjct: 32087530 cgtggttgccgttgcatcacctgaggacgtcgaagcagcaaacaa 32087574



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 66/75 (88%)
 Strand = Plus / Plus

                                                                            
Query: 445      cagtctgatgcggtatttgttgggcatcactgaggaggaacgccagcaaaggcgtgaaga 504
                |||||| ||||| || ||| |||||||||| | |||||||||||||||||| ||||||||
Sbjct: 32087296 cagtctaatgcgatacttgctgggcatcacggtggaggaacgccagcaaagacgtgaaga 32087355

                               
Query: 505      gatactcgcaaccag 519
                ||||||  |||||||
Sbjct: 32087356 gatactatcaaccag 32087370



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 48/52 (92%)
 Strand = Plus / Plus

                                                                    
Query: 33       catccctgggaagtgatccatggctctctcgattgccttctgttaatgaagc 84
                ||||||| ||||||||||||||||| ||||||||||| |||||||| |||||
Sbjct: 32086321 catcccttggaagtgatccatggctttctcgattgccatctgttaacgaagc 32086372
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>dbj|AP005002.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0486G03
          Length = 146713

 Score =  252 bits (127), Expect = 1e-63
 Identities = 157/167 (94%)
 Strand = Plus / Plus

                                                                         
Query: 102   aggttaattatgttggaaaagctggaaacctataccaaagtggataccagctcaatggaa 161
             ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 23165 aggttaattatgttggaaaagctggaaacctgtaccaaagtggatatcagctcaatggaa 23224

                                                                         
Query: 162   gtgcctatgtcatatccaagcacataagcaacacatggttatgggaccgcgttcgagtta 221
             ||||||||||||| |||||||| |||||||| || ||||| |||||||| ||||||||||
Sbjct: 23225 gtgcctatgtcatctccaagcatataagcaatacgtggttgtgggaccgtgttcgagtta 23284

                                                            
Query: 222   gtggtggagcatatggagggttttgtgattttgacactcattcaggt 268
             ||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 23285 gtggtggtgcatatggagggttttgtgattttgacacccattcaggt 23331



 Score =  165 bits (83), Expect = 2e-37
 Identities = 146/167 (87%)
 Strand = Plus / Plus

                                                                         
Query: 281   ttgtcataccgtgatccgaacttgctgaaaacactagaggtctatgatgggactgcaaag 340
             ||||||||||||||||| || ||  ||||||||||||| || ||||||| ||| || |||
Sbjct: 23462 ttgtcataccgtgatccaaatttattgaaaacactagaagtttatgatgagacggccaag 23521

                                                                         
Query: 341   ttcctcagagaactagaggtagatgatgatgctctcacaaaagctattattggcaccata 400
             ||||| ||||| |||||  | |||||||||  ||||||||||||||||||||| ||||||
Sbjct: 23522 ttcctaagagagctagaaatggatgatgattgtctcacaaaagctattattggtaccata 23581

                                                            
Query: 401   ggggatgttgattcctatcagctaccagatgctaaaggttacagcag 447
             || || ||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 23582 ggtgacgttgattcctaccagctgccagatgctaaaggttacagcag 23628



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 91/105 (86%)
 Strand = Plus / Plus

                                                                         
Query: 517   cagcgtgaaggatttcaaggagtttgctgatgccgtcgagacgatcaacgacaatggggt 576
             |||| |||||||||||||||||||||||||||| ||||| || || |||||||| || ||
Sbjct: 24126 cagcttgaaggatttcaaggagtttgctgatgctgtcgaaacaattaacgacaacggtgt 24185

                                                          
Query: 577   tgtggtggctgtagcatcgcctgacgacgtcgaggcagcaaacaa 621
              ||||| || || ||||| ||||| |||||||| |||||||||||
Sbjct: 24186 cgtggttgccgttgcatcacctgaggacgtcgaagcagcaaacaa 24230



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 66/75 (88%)
 Strand = Plus / Plus

                                                                         
Query: 445   cagtctgatgcggtatttgttgggcatcactgaggaggaacgccagcaaaggcgtgaaga 504
             |||||| ||||| || ||| |||||||||| | |||||||||||||||||| ||||||||
Sbjct: 23952 cagtctaatgcgatacttgctgggcatcacggtggaggaacgccagcaaagacgtgaaga 24011

                            
Query: 505   gatactcgcaaccag 519
             ||||||  |||||||
Sbjct: 24012 gatactatcaaccag 24026



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 48/52 (92%)
 Strand = Plus / Plus

                                                                 
Query: 33    catccctgggaagtgatccatggctctctcgattgccttctgttaatgaagc 84
             ||||||| ||||||||||||||||| ||||||||||| |||||||| |||||
Sbjct: 22977 catcccttggaagtgatccatggctttctcgattgccatctgttaacgaagc 23028
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>ref|NM_112804.3| Arabidopsis thaliana ATPREP1/ATZNMP; metalloendopeptidase AT3G19170
            (ATPREP1/ATZNMP) mRNA, complete cds
          Length = 3466

 Score =  101 bits (51), Expect = 3e-18
 Identities = 192/239 (80%)
 Strand = Plus / Plus

                                                                        
Query: 77   aatgaagccattgttatccctacacaggttaattatgttggaaaagctggaaacctatac 136
            |||||||||||||| || || || ||||| || |||||||||||||| || ||| |||||
Sbjct: 2725 aatgaagccattgtaataccaacccaggtaaactatgttggaaaagcgggtaacatatac 2784

                                                                        
Query: 137  caaagtggataccagctcaatggaagtgcctatgtcatatccaagcacataagcaacaca 196
               |  || ||  ||||  |||| ||||| ||||| ||||| ||||| || ||||| |||
Sbjct: 2785 agcaccgggtatgagcttgatggcagtgcgtatgttatatcaaagcatattagcaataca 2844

                                                                        
Query: 197  tggttatgggaccgcgttcgagttagtggtggagcatatggagggttttgtgattttgac 256
            ||||||||||| || ||||| || |||||||| ||||||||||| || |||||||| || 
Sbjct: 2845 tggttatgggatcgtgttcgtgtaagtggtggtgcatatggaggtttctgtgatttcgat 2904

                                                                       
Query: 257  actcattcaggtgtcttttcctatttgtcataccgtgatccgaacttgctgaaaacact 315
             | |||||||| || ||||| || || || ||||| ||||| |||||| |||| |||||
Sbjct: 2905 tcgcattcaggagtattttcttacttatcgtaccgggatccaaacttgttgaagacact 2963



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 65/75 (86%)
 Strand = Plus / Plus

                                                                        
Query: 374  ctcacaaaagctattattggcaccataggggatgttgattcctatcagctaccagatgct 433
            ||||| |||||||||||||||||||| || ||||||||||| || ||  |||| ||||| 
Sbjct: 3022 ctcactaaagctattattggcaccatcggtgatgttgattcataccaattacctgatgcc 3081

                           
Query: 434  aaaggttacagcagt 448
            |||||||| ||||||
Sbjct: 3082 aaaggttatagcagt 3096
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>gb|AY091051.1| Arabidopsis thaliana putative metalloprotease (At3g19170) mRNA,
            complete cds
          Length = 3475

 Score =  101 bits (51), Expect = 3e-18
 Identities = 192/239 (80%)
 Strand = Plus / Plus

                                                                        
Query: 77   aatgaagccattgttatccctacacaggttaattatgttggaaaagctggaaacctatac 136
            |||||||||||||| || || || ||||| || |||||||||||||| || ||| |||||
Sbjct: 2723 aatgaagccattgtaataccaacccaggtaaactatgttggaaaagcgggtaacatatac 2782

                                                                        
Query: 137  caaagtggataccagctcaatggaagtgcctatgtcatatccaagcacataagcaacaca 196
               |  || ||  ||||  |||| ||||| ||||| ||||| ||||| || ||||| |||
Sbjct: 2783 agcaccgggtatgagcttgatggcagtgcgtatgttatatcaaagcatattagcaataca 2842

                                                                        
Query: 197  tggttatgggaccgcgttcgagttagtggtggagcatatggagggttttgtgattttgac 256
            ||||||||||| || ||||| || |||||||| ||||||||||| || |||||||| || 
Sbjct: 2843 tggttatgggatcgtgttcgtgtaagtggtggtgcatatggaggtttctgtgatttcgat 2902

                                                                       
Query: 257  actcattcaggtgtcttttcctatttgtcataccgtgatccgaacttgctgaaaacact 315
             | |||||||| || ||||| || || || ||||| ||||| |||||| |||| |||||
Sbjct: 2903 tcgcattcaggagtattttcttacttatcgtaccgggatccaaacttgttgaagacact 2961



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 65/75 (86%)
 Strand = Plus / Plus

                                                                        
Query: 374  ctcacaaaagctattattggcaccataggggatgttgattcctatcagctaccagatgct 433
            ||||| |||||||||||||||||||| || ||||||||||| || ||  |||| ||||| 
Sbjct: 3020 ctcactaaagctattattggcaccatcggtgatgttgattcataccaattacctgatgcc 3079

                           
Query: 434  aaaggttacagcagt 448
            |||||||| ||||||
Sbjct: 3080 aaaggttatagcagt 3094
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>gb|AY090240.1| Arabidopsis thaliana AT3g19170/MVI11_8 mRNA, complete cds
          Length = 3463

 Score =  101 bits (51), Expect = 3e-18
 Identities = 192/239 (80%)
 Strand = Plus / Plus

                                                                        
Query: 77   aatgaagccattgttatccctacacaggttaattatgttggaaaagctggaaacctatac 136
            |||||||||||||| || || || ||||| || |||||||||||||| || ||| |||||
Sbjct: 2725 aatgaagccattgtaataccaacccaggtaaactatgttggaaaagcgggtaacatatac 2784

                                                                        
Query: 137  caaagtggataccagctcaatggaagtgcctatgtcatatccaagcacataagcaacaca 196
               |  || ||  ||||  |||| ||||| ||||| ||||| ||||| || ||||| |||
Sbjct: 2785 agcaccgggtatgagcttgatggcagtgcgtatgttatatcaaagcatattagcaataca 2844

                                                                        
Query: 197  tggttatgggaccgcgttcgagttagtggtggagcatatggagggttttgtgattttgac 256
            ||||||||||| || ||||| || |||||||| ||||||||||| || |||||||| || 
Sbjct: 2845 tggttatgggatcgtgttcgtgtaagtggtggtgcatatggaggtttctgtgatttcgat 2904

                                                                       
Query: 257  actcattcaggtgtcttttcctatttgtcataccgtgatccgaacttgctgaaaacact 315
             | |||||||| || ||||| || || || ||||| ||||| |||||| |||| |||||
Sbjct: 2905 tcgcattcaggagtattttcttacttatcgtaccgggatccaaacttgttgaagacact 2963



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 65/75 (86%)
 Strand = Plus / Plus

                                                                        
Query: 374  ctcacaaaagctattattggcaccataggggatgttgattcctatcagctaccagatgct 433
            ||||| |||||||||||||||||||| || ||||||||||| || ||  |||| ||||| 
Sbjct: 3022 ctcactaaagctattattggcaccatcggtgatgttgattcataccaattacctgatgcc 3081

                           
Query: 434  aaaggttacagcagt 448
            |||||||| ||||||
Sbjct: 3082 aaaggttatagcagt 3096
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>gb|BT006362.1| Arabidopsis thaliana At3g19170/MVI11_8 gene, complete cds
          Length = 3243

 Score =  101 bits (51), Expect = 3e-18
 Identities = 192/239 (80%)
 Strand = Plus / Plus

                                                                        
Query: 77   aatgaagccattgttatccctacacaggttaattatgttggaaaagctggaaacctatac 136
            |||||||||||||| || || || ||||| || |||||||||||||| || ||| |||||
Sbjct: 2659 aatgaagccattgtaataccaacccaggtaaactatgttggaaaagcgggtaacatatac 2718

                                                                        
Query: 137  caaagtggataccagctcaatggaagtgcctatgtcatatccaagcacataagcaacaca 196
               |  || ||  ||||  |||| ||||| ||||| ||||| ||||| || ||||| |||
Sbjct: 2719 agcaccgggtatgagcttgatggcagtgcgtatgttatatcaaagcatattagcaataca 2778

                                                                        
Query: 197  tggttatgggaccgcgttcgagttagtggtggagcatatggagggttttgtgattttgac 256
            ||||||||||| || ||||| || |||||||| ||||||||||| || |||||||| || 
Sbjct: 2779 tggttatgggatcgtgttcgtgtaagtggtggtgcatatggaggtttctgtgatttcgat 2838

                                                                       
Query: 257  actcattcaggtgtcttttcctatttgtcataccgtgatccgaacttgctgaaaacact 315
             | |||||||| || ||||| || || || ||||| ||||| |||||| |||| |||||
Sbjct: 2839 tcgcattcaggagtattttcttacttatcgtaccgggatccaaacttgttgaagacact 2897



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 65/75 (86%)
 Strand = Plus / Plus

                                                                        
Query: 374  ctcacaaaagctattattggcaccataggggatgttgattcctatcagctaccagatgct 433
            ||||| |||||||||||||||||||| || ||||||||||| || ||  |||| ||||| 
Sbjct: 2956 ctcactaaagctattattggcaccatcggtgatgttgattcataccaattacctgatgcc 3015

                           
Query: 434  aaaggttacagcagt 448
            |||||||| ||||||
Sbjct: 3016 aaaggttatagcagt 3030
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>gb|BT002372.1| Arabidopsis thaliana clone U19043 putative metalloprotease
            (At3g19170) mRNA, complete cds
          Length = 3274

 Score =  101 bits (51), Expect = 3e-18
 Identities = 192/239 (80%)
 Strand = Plus / Plus

                                                                        
Query: 77   aatgaagccattgttatccctacacaggttaattatgttggaaaagctggaaacctatac 136
            |||||||||||||| || || || ||||| || |||||||||||||| || ||| |||||
Sbjct: 2659 aatgaagccattgtaataccaacccaggtaaactatgttggaaaagcgggtaacatatac 2718

                                                                        
Query: 137  caaagtggataccagctcaatggaagtgcctatgtcatatccaagcacataagcaacaca 196
               |  || ||  ||||  |||| ||||| ||||| ||||| ||||| || ||||| |||
Sbjct: 2719 agcaccgggtatgagcttgatggcagtgcgtatgttatatcaaagcatattagcaataca 2778

                                                                        
Query: 197  tggttatgggaccgcgttcgagttagtggtggagcatatggagggttttgtgattttgac 256
            ||||||||||| || ||||| || |||||||| ||||||||||| || |||||||| || 
Sbjct: 2779 tggttatgggatcgtgttcgtgtaagtggtggtgcatatggaggtttctgtgatttcgat 2838

                                                                       
Query: 257  actcattcaggtgtcttttcctatttgtcataccgtgatccgaacttgctgaaaacact 315
             | |||||||| || ||||| || || || ||||| ||||| |||||| |||| |||||
Sbjct: 2839 tcgcattcaggagtattttcttacttatcgtaccgggatccaaacttgttgaagacact 2897



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 65/75 (86%)
 Strand = Plus / Plus

                                                                        
Query: 374  ctcacaaaagctattattggcaccataggggatgttgattcctatcagctaccagatgct 433
            ||||| |||||||||||||||||||| || ||||||||||| || ||  |||| ||||| 
Sbjct: 2956 ctcactaaagctattattggcaccatcggtgatgttgattcataccaattacctgatgcc 3015

                           
Query: 434  aaaggttacagcagt 448
            |||||||| ||||||
Sbjct: 3016 aaaggttatagcagt 3030
to top
>dbj|AP000419.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MVI11
          Length = 81875

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 83/97 (85%)
 Strand = Plus / Minus

                                                                         
Query: 156   atggaagtgcctatgtcatatccaagcacataagcaacacatggttatgggaccgcgttc 215
             |||| ||||| ||||| ||||| ||||| || ||||| |||||||||||||| || ||||
Sbjct: 21444 atggcagtgcgtatgttatatcaaagcatattagcaatacatggttatgggatcgtgttc 21385

                                                  
Query: 216   gagttagtggtggagcatatggagggttttgtgattt 252
             | || |||||||| ||||||||||| || ||||||||
Sbjct: 21384 gtgtaagtggtggtgcatatggaggtttctgtgattt 21348



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 64/74 (86%)
 Strand = Plus / Minus

                                                                         
Query: 374   ctcacaaaagctattattggcaccataggggatgttgattcctatcagctaccagatgct 433
             ||||| |||||||||||||||||||| || ||||||||||| || ||  |||| ||||| 
Sbjct: 21141 ctcactaaagctattattggcaccatcggtgatgttgattcataccaattacctgatgcc 21082

                           
Query: 434   aaaggttacagcag 447
             |||||||| |||||
Sbjct: 21081 aaaggttatagcag 21068
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>ref|NM_180631.1| Arabidopsis thaliana ATPREP2; metalloendopeptidase AT1G49630
            (ATPREP2) transcript variant AT1G49630.2 mRNA, complete
            cds
          Length = 3432

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 76/89 (85%)
 Strand = Plus / Plus

                                                                        
Query: 167  tatgtcatatccaagcacataagcaacacatggttatgggaccgcgttcgagttagtggt 226
            ||||| ||||| ||||| || || ||||||||||||||||| || ||||| || ||||||
Sbjct: 2791 tatgttatatcaaagcatattagtaacacatggttatgggatcgtgttcgtgtaagtggt 2850

                                         
Query: 227  ggagcatatggagggttttgtgattttga 255
            || ||||||||||| |  |||||||||||
Sbjct: 2851 ggtgcatatggaggttcctgtgattttga 2879
to top
>ref|NM_180630.1| Arabidopsis thaliana ATPREP2; metalloendopeptidase AT1G49630
            (ATPREP2) transcript variant AT1G49630.1 mRNA, complete
            cds
          Length = 3582

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 76/89 (85%)
 Strand = Plus / Plus

                                                                        
Query: 167  tatgtcatatccaagcacataagcaacacatggttatgggaccgcgttcgagttagtggt 226
            ||||| ||||| ||||| || || ||||||||||||||||| || ||||| || ||||||
Sbjct: 2791 tatgttatatcaaagcatattagtaacacatggttatgggatcgtgttcgtgtaagtggt 2850

                                         
Query: 227  ggagcatatggagggttttgtgattttga 255
            || ||||||||||| |  |||||||||||
Sbjct: 2851 ggtgcatatggaggttcctgtgattttga 2879
to top
>ref|NM_103851.3| Arabidopsis thaliana ATPREP2; metalloendopeptidase AT1G49630
            (ATPREP2) transcript variant AT1G49630.3 mRNA, complete
            cds
          Length = 3576

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 76/89 (85%)
 Strand = Plus / Plus

                                                                        
Query: 167  tatgtcatatccaagcacataagcaacacatggttatgggaccgcgttcgagttagtggt 226
            ||||| ||||| ||||| || || ||||||||||||||||| || ||||| || ||||||
Sbjct: 2791 tatgttatatcaaagcatattagtaacacatggttatgggatcgtgttcgtgtaagtggt 2850

                                         
Query: 227  ggagcatatggagggttttgtgattttga 255
            || ||||||||||| |  |||||||||||
Sbjct: 2851 ggtgcatatggaggttcctgtgattttga 2879
to top
>gb|AY074305.1| Arabidopsis thaliana putative hydrogenase protein (At1g49630) mRNA,
            complete cds
          Length = 3598

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 76/89 (85%)
 Strand = Plus / Plus

                                                                        
Query: 167  tatgtcatatccaagcacataagcaacacatggttatgggaccgcgttcgagttagtggt 226
            ||||| ||||| ||||| || || ||||||||||||||||| || ||||| || ||||||
Sbjct: 2791 tatgttatatcaaagcatattagtaacacatggttatgggatcgtgttcgtgtaagtggt 2850

                                         
Query: 227  ggagcatatggagggttttgtgattttga 255
            || ||||||||||| |  |||||||||||
Sbjct: 2851 ggtgcatatggaggttcctgtgattttga 2879
to top
>gb|BT004376.1| Arabidopsis thaliana clone U19879 putative hydrogenase (At1g49630)
            mRNA, complete cds
          Length = 3274

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 76/89 (85%)
 Strand = Plus / Plus

                                                                        
Query: 167  tatgtcatatccaagcacataagcaacacatggttatgggaccgcgttcgagttagtggt 226
            ||||| ||||| ||||| || || ||||||||||||||||| || ||||| || ||||||
Sbjct: 2746 tatgttatatcaaagcatattagtaacacatggttatgggatcgtgttcgtgtaagtggt 2805

                                         
Query: 227  ggagcatatggagggttttgtgattttga 255
            || ||||||||||| |  |||||||||||
Sbjct: 2806 ggtgcatatggaggttcctgtgattttga 2834
to top
>gb|AC011807.4|AC011807 Arabidopsis thaliana chromosome I BAC F14J22 genomic sequence, complete
             sequence
          Length = 104679

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 76/89 (85%)
 Strand = Plus / Plus

                                                                         
Query: 167   tatgtcatatccaagcacataagcaacacatggttatgggaccgcgttcgagttagtggt 226
             ||||| ||||| ||||| || || ||||||||||||||||| || ||||| || ||||||
Sbjct: 67499 tatgttatatcaaagcatattagtaacacatggttatgggatcgtgttcgtgtaagtggt 67558

                                          
Query: 227   ggagcatatggagggttttgtgattttga 255
             || ||||||||||| |  |||||||||||
Sbjct: 67559 ggtgcatatggaggttcctgtgattttga 67587
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>gb|AF326573.1| Dengue virus type 4 strain 814669, complete genome
          Length = 10649

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 522  tgaaggatttcaaggagtttgc 543
            ||||||||||||||||||||||
Sbjct: 6343 tgaaggatttcaaggagtttgc 6364
to top
>gb|AY243469.1| Chimeric Dengue virus vector p4(Delta30)-D2-CME, complete sequence
          Length = 15237

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 522  tgaaggatttcaaggagtttgc 543
            ||||||||||||||||||||||
Sbjct: 6341 tgaaggatttcaaggagtttgc 6362
to top
>gb|AY243468.1| Chimeric Dengue virus vector p4-D2-CME, complete sequence
          Length = 15268

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 522  tgaaggatttcaaggagtttgc 543
            ||||||||||||||||||||||
Sbjct: 6341 tgaaggatttcaaggagtttgc 6362
to top
>gb|AY243467.1| Chimeric Dengue virus vector p4(Delta30)-D2-ME, complete sequence
          Length = 15239

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 522  tgaaggatttcaaggagtttgc 543
            ||||||||||||||||||||||
Sbjct: 6343 tgaaggatttcaaggagtttgc 6364
to top
>gb|AY243466.1| Chimeric Dengue virus vector p4-D2-ME, complete sequence
          Length = 15270

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 522  tgaaggatttcaaggagtttgc 543
            ||||||||||||||||||||||
Sbjct: 6343 tgaaggatttcaaggagtttgc 6364
to top
>gb|AY376438.1| Dengue virus vector p4(Delta30), complete sequence
          Length = 15239

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 522  tgaaggatttcaaggagtttgc 543
            ||||||||||||||||||||||
Sbjct: 6343 tgaaggatttcaaggagtttgc 6364
to top
>gb|AF375822.1|AF375822 Dengue virus type 4 recombinant clone 2A, complete genome
          Length = 10649

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 522  tgaaggatttcaaggagtttgc 543
            ||||||||||||||||||||||
Sbjct: 6343 tgaaggatttcaaggagtttgc 6364
to top
>gb|AF326827.1| Dengue virus type 4 recombinant clone rDEN4del30, complete sequence
          Length = 10618

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 522  tgaaggatttcaaggagtttgc 543
            ||||||||||||||||||||||
Sbjct: 6343 tgaaggatttcaaggagtttgc 6364
to top
>gb|AF326826.1| Dengue virus type 4 recombinant clone 2Adel30, complete sequence
          Length = 10618

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 522  tgaaggatttcaaggagtttgc 543
            ||||||||||||||||||||||
Sbjct: 6343 tgaaggatttcaaggagtttgc 6364
to top
>gb|AF326825.1| Dengue virus type 4 recombinant clone rDEN4, complete sequence
          Length = 10649

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 522  tgaaggatttcaaggagtttgc 543
            ||||||||||||||||||||||
Sbjct: 6343 tgaaggatttcaaggagtttgc 6364
to top
>gb|AF289029.1|AF289029 dengue virus type 4 China Guangzhou B5 strain genomic RNA,complete
            cds
          Length = 10665

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 522  tgaaggatttcaaggagtttgc 543
            ||||||||||||||||||||||
Sbjct: 6343 tgaaggatttcaaggagtttgc 6364
to top
>gb|AY947539.1| Dengue virus type 4 strain H241, complete genome
          Length = 10643

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 522  tgaaggatttcaaggagtttgc 543
            ||||||||||||||||||||||
Sbjct: 6335 tgaaggatttcaaggagtttgc 6356
to top
>gb|M14931.2|DENSTRA Dengue virus type 4 polyprotein precursor, gene, complete cds
          Length = 10648

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 522  tgaaggatttcaaggagtttgc 543
            ||||||||||||||||||||||
Sbjct: 6343 tgaaggatttcaaggagtttgc 6364
to top
>gb|AY776330.1| Dengue virus type 4 strain Taiwan-2K0713 polyprotein gene, complete
            cds
          Length = 10353

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 522  tgaaggatttcaaggagtttgc 543
            ||||||||||||||||||||||
Sbjct: 6320 tgaaggatttcaaggagtttgc 6341
to top
>gb|AY618993.1| Dengue virus type 4 strain ThD4_0734_00, complete genome
          Length = 10653

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 522  tgaaggatttcaaggagtttgc 543
            ||||||||||||||||||||||
Sbjct: 6344 tgaaggatttcaaggagtttgc 6365
to top
>gb|AY618992.1| Dengue virus type 4 strain ThD4_0485_01, complete genome
          Length = 10649

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 522  tgaaggatttcaaggagtttgc 543
            ||||||||||||||||||||||
Sbjct: 6343 tgaaggatttcaaggagtttgc 6364
to top
>gb|AY618991.1| Dengue virus type 4 strain ThD4_0087_77, complete genome
          Length = 10650

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 522  tgaaggatttcaaggagtttgc 543
            ||||||||||||||||||||||
Sbjct: 6343 tgaaggatttcaaggagtttgc 6364
to top
>gb|AY618990.1| Dengue virus type 4 strain ThD4_0348_91, complete genome
          Length = 10650

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 522  tgaaggatttcaaggagtttgc 543
            ||||||||||||||||||||||
Sbjct: 6343 tgaaggatttcaaggagtttgc 6364
to top
>gb|AY858050.1| Dengue virus type 4 strain SW38i polyprotein gene, partial cds
          Length = 10516

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 522  tgaaggatttcaaggagtttgc 543
            ||||||||||||||||||||||
Sbjct: 6232 tgaaggatttcaaggagtttgc 6253
to top
>gb|AY858049.1| Dengue virus type 4 strain SW36i polyprotein gene, partial cds
          Length = 10114

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 522  tgaaggatttcaaggagtttgc 543
            ||||||||||||||||||||||
Sbjct: 5830 tgaaggatttcaaggagtttgc 5851
to top
>gb|AY656168.1| Chimeric dengue virus vector p4(delta30)-D3L-ME, complete sequence
          Length = 15256

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 522  tgaaggatttcaaggagtttgc 543
            ||||||||||||||||||||||
Sbjct: 6360 tgaaggatttcaaggagtttgc 6381
to top
>gb|AY656167.1| Chimeric dengue virus vector p4-D3L-ME, complete sequence
          Length = 15287

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 522  tgaaggatttcaaggagtttgc 543
            ||||||||||||||||||||||
Sbjct: 6360 tgaaggatttcaaggagtttgc 6381
to top
>gb|AY648301.1| Dengue virus type 4 vector p4, complete sequence
          Length = 15270

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 522  tgaaggatttcaaggagtttgc 543
            ||||||||||||||||||||||
Sbjct: 6343 tgaaggatttcaaggagtttgc 6364
to top
>gb|AC102103.10| Mus musculus chromosome 15, clone RP23-82K1, complete sequence
          Length = 237423

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 257   actcattcaggtgtcttttc 276
             ||||||||||||||||||||
Sbjct: 81162 actcattcaggtgtcttttc 81143
to top
>gb|BC036982.1| Mus musculus thyrotroph embryonic factor, transcript variant 1, mRNA
            (cDNA clone MGC:46858 IMAGE:4976241), complete cds
          Length = 4222

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 257  actcattcaggtgtcttttc 276
            ||||||||||||||||||||
Sbjct: 3460 actcattcaggtgtcttttc 3441
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>gb|BC017689.1| Mus musculus thyrotroph embryonic factor, transcript variant 2, mRNA
            (cDNA clone MGC:19233 IMAGE:4242534), complete cds
          Length = 4018

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 257  actcattcaggtgtcttttc 276
            ||||||||||||||||||||
Sbjct: 3258 actcattcaggtgtcttttc 3239
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>ref|NM_153484.1| Mus musculus thyrotroph embryonic factor (Tef), transcript variant 2,
            mRNA
          Length = 4018

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 257  actcattcaggtgtcttttc 276
            ||||||||||||||||||||
Sbjct: 3258 actcattcaggtgtcttttc 3239
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>ref|NM_017376.2| Mus musculus thyrotroph embryonic factor (Tef), transcript variant 1,
            mRNA
          Length = 4222

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 257  actcattcaggtgtcttttc 276
            ||||||||||||||||||||
Sbjct: 3460 actcattcaggtgtcttttc 3441
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>gb|AY540631.1| Mus musculus thyrotroph embryonic factor alpha isoform (Tef) mRNA,
            complete cds, alternatively spliced
          Length = 4064

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 257  actcattcaggtgtcttttc 276
            ||||||||||||||||||||
Sbjct: 3480 actcattcaggtgtcttttc 3461
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>gb|AC005486.2| Homo sapiens PAC clone RP5-1070G24 from 7, complete sequence
          Length = 157075

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 80     gaagccattgttatccctacacag 103
              ||||| ||||||||||||||||||
Sbjct: 155215 gaagcaattgttatccctacacag 155238
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>gb|AC132339.3| Mus musculus BAC clone RP24-165O21 from chromosome 5, complete sequence
          Length = 152574

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 462    tgttgggcatcactgaggag 481
              ||||||||||||||||||||
Sbjct: 113570 tgttgggcatcactgaggag 113551
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>gb|AC122232.3| Mus musculus BAC clone RP23-136G1 from chromosome 7, complete sequence
          Length = 182272

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     actcccaagtgccccatccc 38
              ||||||||||||||||||||
Sbjct: 121066 actcccaagtgccccatccc 121047
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>gb|AC004413.2| Homo sapiens PAC clone RP4-650P9 from 7, complete sequence
          Length = 114827

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 70     ttctgttaatgaagccattgttat 93
              |||||||||||||||||| |||||
Sbjct: 106110 ttctgttaatgaagccatagttat 106087
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>gb|CP000243.1| Escherichia coli UTI89, complete genome
          Length = 5065741

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                               
Query: 537     agtttgctgatgccgtcgagacgatcaacgac 568
               |||||||||||| ||||||||| || ||||||
Sbjct: 3791962 agtttgctgatggcgtcgagacaatgaacgac 3791993
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>emb|BX119976.8| Zebrafish DNA sequence from clone CH211-196F5 in linkage group 20
              Contains the gene for a novel protein (zgc:63952), the 3'
              end of the gene for a novel protein similar to mouse and
              human importin 4 (IPO4), three genes for transposase, a
              novel gene and six CpG islands, complete sequence
          Length = 190000

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 119    aaagctggaaacctatacca 138
              ||||||||||||||||||||
Sbjct: 144259 aaagctggaaacctatacca 144240
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>gb|AC144535.4| Homo sapiens 12 BAC RP11-191K23 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 156422

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 7      aggtcttgatgcactcccaa 26
              ||||||||||||||||||||
Sbjct: 137917 aggtcttgatgcactcccaa 137898
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>dbj|AK141606.1| Mus musculus adult male hippocampus cDNA, RIKEN full-length enriched
            library, clone:C630043H05 product:thyrotroph embryonic
            factor, full insert sequence
          Length = 4071

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 257  actcattcaggtgtcttttc 276
            ||||||||||||||||||||
Sbjct: 3323 actcattcaggtgtcttttc 3304
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>dbj|AK147965.1| Mus musculus melanocyte cDNA, RIKEN full-length enriched library,
            clone:G270119N11 product:thyrotroph embryonic factor,
            full insert sequence
          Length = 4175

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 257  actcattcaggtgtcttttc 276
            ||||||||||||||||||||
Sbjct: 3430 actcattcaggtgtcttttc 3411
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>dbj|AK154472.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
            full-length enriched library, clone:F630037E11
            product:thyrotroph embryonic factor, full insert sequence
          Length = 4186

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 257  actcattcaggtgtcttttc 276
            ||||||||||||||||||||
Sbjct: 3441 actcattcaggtgtcttttc 3422
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>gb|AC158970.3| Mus musculus chromosome 15, clone RP24-186A9, complete sequence
          Length = 208509

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 257   actcattcaggtgtcttttc 276
             ||||||||||||||||||||
Sbjct: 27794 actcattcaggtgtcttttc 27813
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>dbj|AK009518.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched
           library, clone:2310028D20 product:unclassifiable, full
           insert sequence
          Length = 1738

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 257 actcattcaggtgtcttttc 276
           ||||||||||||||||||||
Sbjct: 993 actcattcaggtgtcttttc 974
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>gb|BC023410.1| Mus musculus thyrotroph embryonic factor, mRNA (cDNA clone
            IMAGE:5054763), partial cds
          Length = 2688

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 257  actcattcaggtgtcttttc 276
            ||||||||||||||||||||
Sbjct: 1926 actcattcaggtgtcttttc 1907
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>dbj|AK010205.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched
           library, clone:2310076L22 product:unclassifiable, full
           insert sequence
          Length = 813

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 257 actcattcaggtgtcttttc 276
           ||||||||||||||||||||
Sbjct: 68  actcattcaggtgtcttttc 49
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>dbj|AK042146.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched
            library, clone:A630063M24 product:thyrotroph embryonic
            factor, full insert sequence
          Length = 4401

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 257  actcattcaggtgtcttttc 276
            ||||||||||||||||||||
Sbjct: 3656 actcattcaggtgtcttttc 3637
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>dbj|AK085437.1| Mus musculus 0 day neonate kidney cDNA, RIKEN full-length enriched
           library, clone:D630024P09 product:unclassifiable, full
           insert sequence
          Length = 1388

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 257 actcattcaggtgtcttttc 276
           ||||||||||||||||||||
Sbjct: 643 actcattcaggtgtcttttc 624
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>gb|BC094169.1| Xenopus laevis cDNA clone MGC:115330 IMAGE:6948906, complete cds
          Length = 4388

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 467  ggcatcactgaggaggaacg 486
            ||||||||||||||||||||
Sbjct: 1160 ggcatcactgaggaggaacg 1179
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>gb|AC129207.4| Mus musculus chromosome 5 clone RP24-280N5, complete sequence
          Length = 165994

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 462    tgttgggcatcactgaggag 481
              ||||||||||||||||||||
Sbjct: 117870 tgttgggcatcactgaggag 117889


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,034,704
Number of Sequences: 3902068
Number of extensions: 5034704
Number of successful extensions: 93238
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 93082
Number of HSP's gapped (non-prelim): 156
length of query: 622
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 599
effective length of database: 17,143,297,704
effective search space: 10268835324696
effective search space used: 10268835324696
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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