ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal36f05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1BLT4_HORVU (P25307) BLT4 protein precursor 40 0.002
2NLTP8_HORVU (Q43871) Nonspecific lipid-transfer protein Cw18 pre... 32 0.63
3NLTP_ELECO (P23802) Nonspecific lipid-transfer protein (LTP) (Al... 29 4.1
4PG03_MYCTU (P56877) Hypothetical PE-PGRS family protein PE_PGRS3... 28 6.9
5YQJI_SHIFL (P64589) Hypothetical protein yqjI 28 9.0
6YQJI_ECOLI (P64588) Hypothetical protein yqjI 28 9.0
7NLTP2_SORBI (Q43194) Nonspecific lipid-transfer protein 2 precur... 28 9.0
8CN145_MOUSE (Q8BI22) Protein C14orf145 homolog 28 9.0

>BLT4_HORVU (P25307) BLT4 protein precursor|
          Length = 130

 Score = 39.7 bits (91), Expect = 0.002
 Identities = 16/16 (100%), Positives = 16/16 (100%)
 Frame = +2

Query: 107 HHLRPGELCLGPLRRL 154
           HHLRPGELCLGPLRRL
Sbjct: 26  HHLRPGELCLGPLRRL 41



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>NLTP8_HORVU (Q43871) Nonspecific lipid-transfer protein Cw18 precursor (LTP|
           Cw-18) (PKG2316)
          Length = 115

 Score = 31.6 bits (70), Expect = 0.63
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = +3

Query: 114 CGQVSSALGPCAA 152
           CGQVSSALGPCAA
Sbjct: 29  CGQVSSALGPCAA 41



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>NLTP_ELECO (P23802) Nonspecific lipid-transfer protein (LTP) (Alpha-amylase|
           inhibitor I-2)
          Length = 95

 Score = 28.9 bits (63), Expect = 4.1
 Identities = 11/13 (84%), Positives = 12/13 (92%)
 Frame = +3

Query: 114 CGQVSSALGPCAA 152
           CGQVSSA+GPC A
Sbjct: 4   CGQVSSAIGPCLA 16



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>PG03_MYCTU (P56877) Hypothetical PE-PGRS family protein PE_PGRS3 precursor|
          Length = 957

 Score = 28.1 bits (61), Expect = 6.9
 Identities = 15/36 (41%), Positives = 17/36 (47%)
 Frame = -3

Query: 152 GGAGAQGRAHLAAGDGRVGGYEEHCRHQGDQRELGC 45
           GGAG  G   L AG G  GG   H    G+  + GC
Sbjct: 845 GGAGGSGANALGAGTGGTGGDGGHAGVFGNGGDGGC 880



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>YQJI_SHIFL (P64589) Hypothetical protein yqjI|
          Length = 207

 Score = 27.7 bits (60), Expect = 9.0
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -3

Query: 92 YEEHCRHQGDQRELGCCSASHLDGLRCSCG 3
          +E  C+H+G  R  GCC     +   C  G
Sbjct: 5  HEGCCKHEGQPRHEGCCKGEKSEHEHCGHG 34



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>YQJI_ECOLI (P64588) Hypothetical protein yqjI|
          Length = 207

 Score = 27.7 bits (60), Expect = 9.0
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -3

Query: 92 YEEHCRHQGDQRELGCCSASHLDGLRCSCG 3
          +E  C+H+G  R  GCC     +   C  G
Sbjct: 5  HEGCCKHEGQPRHEGCCKGEKSEHEHCGHG 34



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>NLTP2_SORBI (Q43194) Nonspecific lipid-transfer protein 2 precursor (LTP 2)|
          Length = 122

 Score = 27.7 bits (60), Expect = 9.0
 Identities = 10/11 (90%), Positives = 11/11 (100%)
 Frame = +3

Query: 114 CGQVSSALGPC 146
           CGQVSSA+GPC
Sbjct: 33  CGQVSSAIGPC 43



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>CN145_MOUSE (Q8BI22) Protein C14orf145 homolog|
          Length = 524

 Score = 27.7 bits (60), Expect = 9.0
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +1

Query: 4   PQLHLSPSRWLALQQPSSRW 63
           PQLH  P RWLA  +   +W
Sbjct: 354 PQLHYDPHRWLAESKTKLQW 373


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,155,960
Number of Sequences: 219361
Number of extensions: 207670
Number of successful extensions: 982
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 847
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 981
length of database: 80,573,946
effective HSP length: 26
effective length of database: 74,870,560
effective search space used: 1796893440
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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