ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal35p11 |
|---|---|
| Clone Library Name | barley_pub |
>MENA_SYNY3 (P73962) Probable 1,4-dihydroxy-2-naphthoate octaprenyltransferase| (EC 2.5.1.-) (DHNA-octaprenyltransferase) Length = 307 Score = 140 bits (354), Expect = 3e-33 Identities = 83/238 (34%), Positives = 113/238 (47%) Frame = +1 Query: 1 NDVYDSDTGADKNKKESVVNIVGSRAVTQYXXXXXXXXXXXXXXXXXXXXXDVRFIVLVL 180 NDV+DSDTG D K SVVN+ G+R + D + L+ Sbjct: 72 NDVFDSDTGIDVRKAHSVVNLTGNRNLVFLISNFFLLAGVLGLMSMSWRAQDWTVLELIG 131 Query: 181 CAILCGYVYQCPPFRLSYRGLGEPLCFAAFGPLATXXXXXXXXXXXXXXGTALLPITKTV 360 AI GY YQ PPFRL Y GLGE +C FGPLA + + Sbjct: 132 VAIFLGYTYQGPPFRLGYLGLGELICLITFGPLAIAAAYYSQSQS----------FSWNL 181 Query: 361 IASSILVGLTTTLILFCSHFHQIDGDRAVGKMSPLVRIGTKTGSTVVTXXXXXXXXXXXX 540 + S+ VG++T +ILFCSHFHQ++ D A GK SP+VR+GTK GS V+T Sbjct: 182 LTPSVFVGISTAIILFCSHFHQVEDDLAAGKKSPIVRLGTKLGSQVLT-LSVVSLYLITA 240 Query: 541 FGISRCLPPSCIVLGALTLPLGKWVVDYVQRNHDDDAKIFMAKYYCVRLHAVLGMALA 714 G+ P +L +LP ++ +V + HD ++ K+ V LH GM +A Sbjct: 241 IGVLCHQAPWQTLLIIASLPWAVQLIRHVGQYHDQPEQVSNCKFIAVNLHFFSGMLMA 298
>MENA_MYCTU (P65650) Probable 1,4-dihydroxy-2-naphthoate octaprenyltransferase| (EC 2.5.1.-) (DHNA-octaprenyltransferase) Length = 292 Score = 33.5 bits (75), Expect = 0.66 Identities = 34/162 (20%), Positives = 54/162 (33%), Gaps = 3/162 (1%) Frame = +1 Query: 1 NDVYDSDTGADKNKKESVVNIVGSRAVTQYXXXXXXXXXXXXXXXXXXXXXDVRFIVLVL 180 ND D G D ++ V +VGSR T + L+ Sbjct: 59 NDYSDGIRGTDDDRV-GPVRLVGSRLATPRSVLTAAMTSLALGALAGLVLALLSAPWLIA 117 Query: 181 CAILC---GYVYQCPPFRLSYRGLGEPLCFAAFGPLATXXXXXXXXXXXXXXGTALLPIT 351 +C ++Y Y G GE F FGP+A T L + Sbjct: 118 VGAICIAGAWLYTGGSKPYGYAGFGELAVFVFFGPVAVLGTQY----------TQALRVD 167 Query: 352 KTVIASSILVGLTTTLILFCSHFHQIDGDRAVGKMSPLVRIG 477 +A ++ G + +L ++ I D K++ VR+G Sbjct: 168 WVGLAQAVATGALSCSVLVANNLRDIPTDARADKITLAVRLG 209
>MENA_MYCBO (P65651) Probable 1,4-dihydroxy-2-naphthoate octaprenyltransferase| (EC 2.5.1.-) (DHNA-octaprenyltransferase) Length = 292 Score = 33.5 bits (75), Expect = 0.66 Identities = 34/162 (20%), Positives = 54/162 (33%), Gaps = 3/162 (1%) Frame = +1 Query: 1 NDVYDSDTGADKNKKESVVNIVGSRAVTQYXXXXXXXXXXXXXXXXXXXXXDVRFIVLVL 180 ND D G D ++ V +VGSR T + L+ Sbjct: 59 NDYSDGIRGTDDDRV-GPVRLVGSRLATPRSVLTAAMTSLALGALAGLVLALLSAPWLIA 117 Query: 181 CAILC---GYVYQCPPFRLSYRGLGEPLCFAAFGPLATXXXXXXXXXXXXXXGTALLPIT 351 +C ++Y Y G GE F FGP+A T L + Sbjct: 118 VGAICIAGAWLYTGGSKPYGYAGFGELAVFVFFGPVAVLGTQY----------TQALRVD 167 Query: 352 KTVIASSILVGLTTTLILFCSHFHQIDGDRAVGKMSPLVRIG 477 +A ++ G + +L ++ I D K++ VR+G Sbjct: 168 WVGLAQAVATGALSCSVLVANNLRDIPTDARADKITLAVRLG 209
>EX5B_CHLTR (O84645) Exodeoxyribonuclease V beta chain (EC 3.1.11.5)| Length = 1026 Score = 33.1 bits (74), Expect = 0.87 Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 4/76 (5%) Frame = +3 Query: 204 LSVPAVPIE---LSWPRRTIVFCCIWPIGYISFLLLKQQQKHFKRDCASPY-HQNSHSFI 371 LS PA P++ W + FC PI + LLK Q+H K CA Y H S + + Sbjct: 289 LSAPASPLDPFFQDWIQLAHPFCQKEPIFHT---LLKSVQQHLKTHCAQSYSHDESIATL 345 Query: 372 DSCRVDNHTDTLLQPL 419 +S H DT++ L Sbjct: 346 ESLLA--HNDTVVSQL 359
>Y013_MYCPN (P75100) Hypothetical UPF0134 protein MPN013 (D12_orf257)| Length = 257 Score = 32.7 bits (73), Expect = 1.1 Identities = 12/20 (60%), Positives = 15/20 (75%) Frame = -2 Query: 168 DEPDVPCFSKGPK*PSKPEQ 109 D+PD PC +KGPK P PE+ Sbjct: 58 DQPDGPCITKGPKEPGGPEE 77
>ZN638_HUMAN (Q14966) Zinc finger protein 638 (Nuclear protein 220) (Zinc-finger| matrin-like protein) (Cutaneous T-cell lymphoma-associated antigen se33-1) (CTCL tumor antigen se33-1) Length = 1978 Score = 31.2 bits (69), Expect = 3.3 Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 3/88 (3%) Frame = +3 Query: 348 HQNSHSFIDSCRVDNHTDTLLQP-LSPDRRRQGCRKDVSPGKNRHQNRLDSSNACDRRPL 524 HQN+ + I+SCR P + P RR +G RK+ + R S + RR Sbjct: 444 HQNTSTHIESCRQLRQQYPDWNPEILPSRRNEGNRKENETPRRR------SHSPSPRRSR 497 Query: 525 RSLGG--FRHKQMPPAILHCPWRPDSPS 602 RS FR + P +H +RP S S Sbjct: 498 RSSSSHRFRRSRSP---MHYMYRPRSRS 522
>LEUNG_ARATH (Q9FUY2) Transcriptional corepressor LEUNIG| Length = 931 Score = 30.8 bits (68), Expect = 4.3 Identities = 17/54 (31%), Positives = 22/54 (40%) Frame = +3 Query: 63 CWQSSSDTVCSEPFSSARVWRAILGLC*SRGRQVHRVGAMCNPLRLCLSVPAVP 224 CW S D + S +VW G S G VH + N + C+ PA P Sbjct: 825 CWDPSGDFLASVSEDMVKVWTLGTG---SEGECVHELSCNGNKFQSCVFHPAYP 875
>RASA3_MOUSE (Q60790) Ras GTPase-activating protein 3 (GAP1(IP4BP)) (Ins| P4-binding protein) (GapIII) Length = 834 Score = 30.4 bits (67), Expect = 5.6 Identities = 14/34 (41%), Positives = 17/34 (50%) Frame = +2 Query: 602 WANGSWTTCRETMMMTPRSSWPSITACGCTPCSG 703 + NG W CR + S TA GCTPC+G Sbjct: 691 YLNGHWLCCRAS----------SDTAAGCTPCTG 714
>TBCD_BOVIN (Q28205) Tubulin-specific chaperone D (Tubulin-folding cofactor D)| (Beta-tubulin cofactor D) Length = 1199 Score = 30.0 bits (66), Expect = 7.3 Identities = 16/40 (40%), Positives = 21/40 (52%) Frame = +3 Query: 300 LKQQQKHFKRDCASPYHQNSHSFIDSCRVDNHTDTLLQPL 419 L Q KH KR+ PY +DSCR+ + TLL+ L Sbjct: 264 LAQIFKHGKREDCLPYAATVLQCLDSCRLPDSNQTLLRKL 303
>M3K4_MOUSE (O08648) Mitogen-activated protein kinase kinase kinase 4 (EC| 2.7.11.25) (MAPK/ERK kinase kinase 4) (MEK kinase 4) (MEKK 4) Length = 1597 Score = 29.6 bits (65), Expect = 9.6 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = +1 Query: 172 LVLCAILCGYVYQCPPFRLSYRGLGEP 252 LVLC +L +++C RL R GEP Sbjct: 608 LVLCRVLLNVIHECLKLRLEQRPAGEP 634
>M3K4_HUMAN (Q9Y6R4) Mitogen-activated protein kinase kinase kinase 4 (EC| 2.7.11.25) (MAPK/ERK kinase kinase 4) (MEK kinase 4) (MEKK 4) (MAP three kinase 1) Length = 1607 Score = 29.6 bits (65), Expect = 9.6 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = +1 Query: 172 LVLCAILCGYVYQCPPFRLSYRGLGEP 252 LVLC +L +++C RL R GEP Sbjct: 617 LVLCRVLLNVIHECLKLRLEQRPAGEP 643 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 104,572,680 Number of Sequences: 219361 Number of extensions: 2168730 Number of successful extensions: 6431 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 6091 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6426 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7252940416 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
