ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal36e03 |
|---|---|
| Clone Library Name | barley_pub |
>SGAT_ARATH (Q56YA5) Serine--glyoxylate aminotransferase (EC 2.6.1.45)| (Alanine--glyoxylate aminotransferase) (EC 2.6.1.44) (AGT) (Serine--pyruvate aminotransferase) (EC 2.6.1.51) Length = 401 Score = 233 bits (595), Expect = 1e-61 Identities = 111/145 (76%), Positives = 123/145 (84%) Frame = +1 Query: 1 LPTGLGIVCASPKALEAAKTAKSVRVFFDWKDYLKFYKMGTYWPYTPSIQXXXXXXXXXX 180 LPTGLGIVCASPKALEA KT+KS++VFFDW DYLKFYK+GTYWPYTPSIQ Sbjct: 205 LPTGLGIVCASPKALEATKTSKSLKVFFDWNDYLKFYKLGTYWPYTPSIQLLYGLRAALD 264 Query: 181 XXFEEGLDNVIKRHTRLGTATRLAVAAWGLKNCTEKEENFSDTVTAVVVPPYIDSSEIVK 360 FEEGL+N+I RH RLG ATRLAV AWGLKNCT+KEE S+TVTAV+VPP+ID SEIV+ Sbjct: 265 LIFEEGLENIIARHARLGKATRLAVEAWGLKNCTQKEEWISNTVTAVMVPPHIDGSEIVR 324 Query: 361 HAWKRYNLSLGLGLNKVAGKVFRIG 435 AW+RYNLSLGLGLNKVAGKVFRIG Sbjct: 325 RAWQRYNLSLGLGLNKVAGKVFRIG 349
>SGAA_METEX (P55819) Serine--glyoxylate aminotransferase (EC 2.6.1.45) (SGAT)| Length = 379 Score = 150 bits (380), Expect = 1e-36 Identities = 78/150 (52%), Positives = 100/150 (66%), Gaps = 5/150 (3%) Frame = +1 Query: 1 LPTGLGIVCASPKALEAA-----KTAKSVRVFFDWKDYLKFYKMGTYWPYTPSIQXXXXX 165 LP GLG++C S KAL+AA + + RV+FDW+D K G Y+PYTP + Sbjct: 182 LPAGLGVICVSQKALKAAEGQSGRNDRLARVYFDWEDQKKQNPTG-YFPYTPPLPLLYGL 240 Query: 166 XXXXXXXFEEGLDNVIKRHTRLGTATRLAVAAWGLKNCTEKEENFSDTVTAVVVPPYIDS 345 FEEGL+NV RH LG ATR AVAAWGLK C + E SDTVTA++ P +D+ Sbjct: 241 REALACLFEEGLENVYHRHAVLGEATRQAVAAWGLKTCAKSPEWNSDTVTAILAPEGVDA 300 Query: 346 SEIVKHAWKRYNLSLGLGLNKVAGKVFRIG 435 ++I+KHA+ RYNL+LG GL++VAGKVFRIG Sbjct: 301 AKIIKHAYVRYNLALGAGLSQVAGKVFRIG 330
>SGAA_HYPME (O08374) Serine--glyoxylate aminotransferase (EC 2.6.1.45) (SGAT)| Length = 404 Score = 141 bits (355), Expect = 8e-34 Identities = 76/147 (51%), Positives = 96/147 (65%), Gaps = 2/147 (1%) Frame = +1 Query: 1 LPTGLGIVCASPKALEA--AKTAKSVRVFFDWKDYLKFYKMGTYWPYTPSIQXXXXXXXX 174 LPTGLGI+ S KAL+ +K + R FF ++D +K G ++PYTP+ Q Sbjct: 199 LPTGLGILAVSQKALDINKSKNGRMNRCFFSFEDMIKTNDQG-FFPYTPATQLLRGLRTS 257 Query: 175 XXXXFEEGLDNVIKRHTRLGTATRLAVAAWGLKNCTEKEENFSDTVTAVVVPPYIDSSEI 354 F EGLDNV RHTRL + R AV AWGLK C ++ + +SDTV+A++VP IDS+ I Sbjct: 258 LDLLFAEGLDNVFARHTRLASGVRAAVDAWGLKLCAKEPKWYSDTVSAILVPEGIDSNAI 317 Query: 355 VKHAWKRYNLSLGLGLNKVAGKVFRIG 435 K A+ RYN S GLGLNKVAGKVFRIG Sbjct: 318 TKTAYYRYNTSFGLGLNKVAGKVFRIG 344
>Y959_METJA (Q58369) Putative aminotransferase MJ0959 (EC 2.6.1.-)| Length = 385 Score = 80.5 bits (197), Expect = 2e-15 Identities = 51/145 (35%), Positives = 70/145 (48%), Gaps = 1/145 (0%) Frame = +1 Query: 4 PTGLGIVCASPKALEAAK-TAKSVRVFFDWKDYLKFYKMGTYWPYTPSIQXXXXXXXXXX 180 P GL + S KA E K V + D Y K+Y+ PYTPS+ Sbjct: 199 PPGLAAITVSEKAWEVIKKNDDKVGFYLDLLAYKKYYEEKKQTPYTPSVNLTYALNVALD 258 Query: 181 XXFEEGLDNVIKRHTRLGTATRLAVAAWGLKNCTEKEENFSDTVTAVVVPPYIDSSEIVK 360 EEG++N +KRH RL ATR + A G++ KE S TVT+ P I+ S+ Sbjct: 259 LVLEEGIENRVKRHERLAKATRAGLEAMGIE-LFAKERARSVTVTSAKYPEGIEDSKFRG 317 Query: 361 HAWKRYNLSLGLGLNKVAGKVFRIG 435 +YN+ + G +AGK+FRIG Sbjct: 318 ILSNKYNIVVAGGQKHLAGKIFRIG 342
>DHSS_ANACY (P16421) Soluble hydrogenase 42 kDa subunit (EC 1.12.-.-) (Tritium| exchange subunit) Length = 383 Score = 74.7 bits (182), Expect = 9e-14 Identities = 49/145 (33%), Positives = 74/145 (51%) Frame = +1 Query: 1 LPTGLGIVCASPKALEAAKTAKSVRVFFDWKDYLKFYKMGTYWPYTPSIQXXXXXXXXXX 180 +P GLG V SPKA EA KTAK + + D Y K T P+TP + Sbjct: 198 IPPGLGFVSVSPKAWEAYKTAKLPKYYLDLGKYRKATAKNT-TPFTPPVNLMVALHTTLG 256 Query: 181 XXFEEGLDNVIKRHTRLGTATRLAVAAWGLKNCTEKEENFSDTVTAVVVPPYIDSSEIVK 360 +EGL+++ RH R ATR A+ A L +E S +TAV P +++ +I Sbjct: 257 MMKKEGLESIFTRHERQKNATRAAMKALNLP-LFAADECASPAITAVATPG-MEADKIRS 314 Query: 361 HAWKRYNLSLGLGLNKVAGKVFRIG 435 KR++++L G + ++ K+FR+G Sbjct: 315 LMKKRFDIALAGGQDHLSNKIFRVG 339
>DHSS_SYNP1 (P14776) Soluble hydrogenase, small subunit (EC 1.12.-.-) (Tritium| exchange subunit) Length = 384 Score = 67.4 bits (163), Expect = 1e-11 Identities = 48/145 (33%), Positives = 70/145 (48%) Frame = +1 Query: 1 LPTGLGIVCASPKALEAAKTAKSVRVFFDWKDYLKFYKMGTYWPYTPSIQXXXXXXXXXX 180 +P GL V SPKA EA KTA + + D Y K T P+TP + Sbjct: 198 IPPGLAFVSVSPKAWEAYKTATLPKFYLDLGKYRKDAAKHTT-PFTPPVNLFFALKTALE 256 Query: 181 XXFEEGLDNVIKRHTRLGTATRLAVAAWGLKNCTEKEENFSDTVTAVVVPPYIDSSEIVK 360 EGL+ + +RH RL ATR A+ A L + S +TA V P +++ I Sbjct: 257 MMQAEGLEAIFQRHQRLMQATRAAMKALNLP-LYAADSCASPAITA-VAPQGVEAENIRS 314 Query: 361 HAWKRYNLSLGLGLNKVAGKVFRIG 435 KR++++L G + + G++FRIG Sbjct: 315 LMKKRFDIALAGGQDHLKGQIFRIG 339
>SGAT_MAIZE (P84187) Serine--glyoxylate aminotransferase (EC 2.6.1.45) (SGAT)| (Alanine--glyoxylate aminotransferase) (EC 2.6.1.44) (AGT) (Fragments) Length = 136 Score = 62.4 bits (150), Expect = 5e-10 Identities = 52/143 (36%), Positives = 57/143 (39%), Gaps = 1/143 (0%) Frame = +1 Query: 4 PTGLGIVCASPKALEAAKTAKSVRVFFDWKDYLKFYKMGTYWPYTPSIQXXXXXXXXXXX 183 PTG+G+VCASP RVFFDWKDYL+ TYW Y Sbjct: 66 PTGMGLVCASP------------RVFFDWKDYLR-----TYWHY---------------- 92 Query: 184 XFEEGLDNVIKRHTRLGTATRLAVAAWGLKNCTEKEENFSDTVTAVVVPPYIDSSEIVKH 363 ++ LD LAV AWGL N Sbjct: 93 --DQALD------------LELAVEAWGLSN----------------------------- 109 Query: 364 AWKRYNLSLGLGLNKVA-GKVFR 429 RYNLSLGLGLNKVA GKVFR Sbjct: 110 ---RYNLSLGLGLNKVAGGKVFR 129
>SPYA_CALJA (P31029) Serine--pyruvate aminotransferase, mitochondrial precursor| (EC 2.6.1.51) (SPT) (Alanine--glyoxylate aminotransferase) (EC 2.6.1.44) (AGT) Length = 414 Score = 42.4 bits (98), Expect = 5e-04 Identities = 26/82 (31%), Positives = 39/82 (47%) Frame = +1 Query: 190 EEGLDNVIKRHTRLGTATRLAVAAWGLKNCTEKEENFSDTVTAVVVPPYIDSSEIVKHAW 369 E+GL+N ++H + A GL+ + TVT V VP D +IV + Sbjct: 303 EQGLENSWRKHREAAAYLHGRLQALGLRLFVKDPALRLPTVTTVAVPTGYDWRDIVSYLI 362 Query: 370 KRYNLSLGLGLNKVAGKVFRIG 435 +R+ + + GL GKV RIG Sbjct: 363 ERFGIEITGGLGPSTGKVLRIG 384
>SPYA_FELCA (P41689) Serine--pyruvate aminotransferase, mitochondrial precursor| (EC 2.6.1.51) (SPT) (Alanine--glyoxylate aminotransferase) (EC 2.6.1.44) (AGT) Length = 414 Score = 42.0 bits (97), Expect = 7e-04 Identities = 37/153 (24%), Positives = 57/153 (37%), Gaps = 9/153 (5%) Frame = +1 Query: 4 PTGLGIVCASPKALEAAKTAKSVRVFFDWKDYLKFYKMGTYWP---------YTPSIQXX 156 P G ++ S KA T K+ V F YL + W +T + Sbjct: 236 PPGTSLISFSDKAKNKIYTRKTKPVSF----YLDMKWLANIWGCDGKPRIYHHTTPVVSL 291 Query: 157 XXXXXXXXXXFEEGLDNVIKRHTRLGTATRLAVAAWGLKNCTEKEENFSDTVTAVVVPPY 336 E+GL+N ++H + + GL+ + TVT V VP Sbjct: 292 YSLRESLALIAEQGLENSWRQHREVTAYLHGRLQGLGLQLFVKDPALRLPTVTTVAVPAG 351 Query: 337 IDSSEIVKHAWKRYNLSLGLGLNKVAGKVFRIG 435 D +IV + +++ + GL GKV RIG Sbjct: 352 YDWRDIVNYVMDHFDIEITGGLGPSMGKVLRIG 384
>SPYA_RAT (P09139) Serine--pyruvate aminotransferase, mitochondrial precursor| (EC 2.6.1.51) (SPT) (Alanine--glyoxylate aminotransferase) (EC 2.6.1.44) (AGT) Length = 414 Score = 41.2 bits (95), Expect = 0.001 Identities = 25/82 (30%), Positives = 37/82 (45%) Frame = +1 Query: 190 EEGLDNVIKRHTRLGTATRLAVAAWGLKNCTEKEENFSDTVTAVVVPPYIDSSEIVKHAW 369 E+GL+N +RH + GLK + E T+T V VP + +IV + Sbjct: 303 EQGLENSWRRHREATAHLHKCLRELGLKFFVKDPEIRLPTITTVTVPAGYNWRDIVSYVL 362 Query: 370 KRYNLSLGLGLNKVAGKVFRIG 435 +N+ + GL KV RIG Sbjct: 363 DHFNIEISGGLGPSEDKVLRIG 384
>SPYA_HUMAN (P21549) Serine--pyruvate aminotransferase (EC 2.6.1.51) (SPT)| (Alanine--glyoxylate aminotransferase) (EC 2.6.1.44) (AGT) Length = 392 Score = 40.0 bits (92), Expect = 0.003 Identities = 36/153 (23%), Positives = 58/153 (37%), Gaps = 9/153 (5%) Frame = +1 Query: 4 PTGLGIVCASPKALEAAKTAKSVRVFFDWKDYLKFYKMGTYWP---------YTPSIQXX 156 P G ++ S KA + + K+ F YL + +W +T + Sbjct: 214 PPGTSLISFSDKAKKKMYSRKTKPFSF----YLDIKWLANFWGCDDQPRMYHHTIPVISL 269 Query: 157 XXXXXXXXXXFEEGLDNVIKRHTRLGTATRLAVAAWGLKNCTEKEENFSDTVTAVVVPPY 336 E+GL+N ++H + A GL+ + TVT V VP Sbjct: 270 YSLRESLALIAEQGLENSWRQHREAAAYLHGRLQALGLQLFVKDPALRLPTVTTVAVPAG 329 Query: 337 IDSSEIVKHAWKRYNLSLGLGLNKVAGKVFRIG 435 D +IV + +++ + GL GKV RIG Sbjct: 330 YDWRDIVSYVIDHFDIEIMGGLGPSTGKVLRIG 362
>PUCG_BACSU (O32148) Purine catabolism protein pucG (EC 2.-.-.-)| Length = 416 Score = 35.8 bits (81), Expect = 0.047 Identities = 22/82 (26%), Positives = 36/82 (43%) Frame = +1 Query: 190 EEGLDNVIKRHTRLGTATRLAVAAWGLKNCTEKEENFSDTVTAVVVPPYIDSSEIVKHAW 369 EEGL+ +RH A + A GL+ + VT V +P ID + Sbjct: 285 EEGLETRFERHRHHEAALAAGIKAMGLRLFGDDSCKMP-VVTCVEIPGGIDGESVRDMLL 343 Query: 370 KRYNLSLGLGLNKVAGKVFRIG 435 ++ + + +AGK++RIG Sbjct: 344 AQFGIEIASSFGPLAGKIWRIG 365
>SPYA_RABIT (P31030) Serine--pyruvate aminotransferase (EC 2.6.1.51) (SPT)| (Alanine--glyoxylate aminotransferase) (EC 2.6.1.44) (AGT) Length = 392 Score = 34.7 bits (78), Expect = 0.11 Identities = 23/82 (28%), Positives = 36/82 (43%) Frame = +1 Query: 190 EEGLDNVIKRHTRLGTATRLAVAAWGLKNCTEKEENFSDTVTAVVVPPYIDSSEIVKHAW 369 E+GL+ +RH + + GL+ + TVT V+VP +IV + Sbjct: 281 EQGLEKSWQRHREVAQHLYRRLQELGLQLFVKDPALRLPTVTTVIVPASYRWRDIVSYVM 340 Query: 370 KRYNLSLGLGLNKVAGKVFRIG 435 + + + GL A KV RIG Sbjct: 341 HHFGIEITGGLGPSADKVLRIG 362
>CEFD_NOCLA (Q03046) Isopenicillin N epimerase (EC 5.1.1.17)| Length = 398 Score = 32.7 bits (73), Expect = 0.40 Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 3/85 (3%) Frame = +1 Query: 187 FEEGLDN--VIKRHTRLGTATRLAVAAW-GLKNCTEKEENFSDTVTAVVVPPYIDSSEIV 357 F+ GL + V +R L TR ++ W GL+ T S +TA +PP D++ + Sbjct: 292 FQAGLGHGRVRERMRELAAFTRERLSGWRGLEPVTPAHPGLSGAMTAFRLPPGTDTAGLR 351 Query: 358 KHAWKRYNLSLGLGLNKVAGKVFRI 432 W R+ + + + L++ G + R+ Sbjct: 352 HGLWDRFRIDVPV-LDRPDGPLLRV 375
>SPYA_MOUSE (O35423) Serine--pyruvate aminotransferase, mitochondrial precursor| (EC 2.6.1.51) (SPT) (Alanine--glyoxylate aminotransferase) (EC 2.6.1.44) (AGT) Length = 413 Score = 32.3 bits (72), Expect = 0.52 Identities = 22/82 (26%), Positives = 35/82 (42%) Frame = +1 Query: 190 EEGLDNVIKRHTRLGTATRLAVAAWGLKNCTEKEENFSDTVTAVVVPPYIDSSEIVKHAW 369 E GL+N +RH + GLK + E T+T V Y + +IV + Sbjct: 303 ERGLENCWRRHREATAHLHKHLQEMGLKFFVKDPEIRLPTITTVTAAGY-NWRDIVSYVL 361 Query: 370 KRYNLSLGLGLNKVAGKVFRIG 435 +++ + GL +V RIG Sbjct: 362 DHFSIEISGGLGPTEERVLRIG 383
>POLG_TBEVH (Q01299) Genome polyprotein [Contains: Capsid protein C (Core| protein); Envelope protein M (Matrix protein); Major envelope protein E; Nonstructural protein 1 (NS1); Nonstructural protein 2A (NS2A); Flavivirin protease NS2B regulatory subunit; Length = 3414 Score = 30.8 bits (68), Expect = 1.5 Identities = 28/108 (25%), Positives = 45/108 (41%), Gaps = 7/108 (6%) Frame = +1 Query: 88 WKDYLKFYKMGTYWPYTPSIQXXXXXXXXXXXXFEEGLDNVIKRHTRL------GTATRL 249 W++ ++Y Y+P TP FEEG V+ ++ RL + T L Sbjct: 798 WREVSEWYDNYAYYPETPG-----ALASAIKETFEEGSCGVVPQN-RLEMAMWRSSVTEL 851 Query: 250 AVA-AWGLKNCTEKEENFSDTVTAVVVPPYIDSSEIVKHAWKRYNLSL 390 +A A G N T + F T VP + + +K +WK + S+ Sbjct: 852 NLALAEGEANLTVMVDKFDPTDYRGGVPGLLKKGKDIKVSWKSWGHSM 899
>SGAT_WHEAT (P84188) Serine--glyoxylate aminotransferase (EC 2.6.1.45) (SGAT)| (Alanine--glyoxylate aminotransferase) (EC 2.6.1.44) (AGT) (Fragments) Length = 78 Score = 30.4 bits (67), Expect = 2.0 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = +1 Query: 55 KTAKSVRVFFDWKDYLK 105 K + RVFFDWKDYLK Sbjct: 38 KLLDAYRVFFDWKDYLK 54
>POLG_TBEVW (P14336) Genome polyprotein [Contains: Capsid protein C (Core| protein); Envelope protein M (Matrix protein); Major envelope protein E; Nonstructural protein 1 (NS1); Nonstructural protein 2A (NS2A); Flavivirin protease NS2B regulatory subunit; Length = 3414 Score = 30.4 bits (67), Expect = 2.0 Identities = 28/108 (25%), Positives = 45/108 (41%), Gaps = 7/108 (6%) Frame = +1 Query: 88 WKDYLKFYKMGTYWPYTPSIQXXXXXXXXXXXXFEEGLDNVIKRHTRL------GTATRL 249 W++ ++Y Y+P TP FEEG V+ ++ RL + T L Sbjct: 798 WREVSEWYDNYAYYPETPG-----ALASAIKETFEEGSCGVVPQN-RLEMAMWRSSVTEL 851 Query: 250 AVA-AWGLKNCTEKEENFSDTVTAVVVPPYIDSSEIVKHAWKRYNLSL 390 +A A G N T + F T VP + + +K +WK + S+ Sbjct: 852 NLALAEGEANLTVVVDKFDPTDYRGGVPGLLKKGKDIKVSWKSWGHSM 899
>BCHE_RHOS4 (Q9RFD3) Anaerobic magnesium-protoporphyrin IX monomethyl ester| [oxidative] cyclase (EC 1.14.13.-) (Anaerobic Mg-protoporphyrin IX monomethyl ester oxidative cyclase) Length = 612 Score = 28.5 bits (62), Expect = 7.6 Identities = 11/29 (37%), Positives = 18/29 (62%) Frame = +1 Query: 64 KSVRVFFDWKDYLKFYKMGTYWPYTPSIQ 150 ++ R+ +DW+ L + M T WP+TP Q Sbjct: 359 ETYRMAWDWQPDLANWSMYTPWPFTPLFQ 387 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 33,078,277 Number of Sequences: 219361 Number of extensions: 444954 Number of successful extensions: 1405 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 1337 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1395 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2570413340 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
