| Clone Name | baal35o22 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_479284.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1227 Score = 383 bits (193), Expect = e-103 Identities = 373/433 (86%) Strand = Plus / Plus Query: 95 aagggtaaatgggatcagaagggccttcaatcgtgactgtccatgttaccggatttaaga 154 ||||||||||||| |||||||| |||||| | || ||||||||||||||||||||||||| Sbjct: 302 aagggtaaatgggttcagaaggaccttcagttgttactgtccatgttaccggatttaaga 361 Query: 155 agtttcatggagttgctgagaacccgacagagaaacttgtgaccaatattaaatccttca 214 |||| ||||| |||||||||||||| || |||||| ||||| |||| ||||||| ||| Sbjct: 362 agttccatggggttgctgagaacccaactgagaaaattgtgggcaatcttaaatcattcg 421 Query: 215 ttgaaaagagagggttgccaaaaaatcttgtacttggaagctgtgaaattctcgaaacag 274 | ||||||| ||| ||||| ||||| ||||||||||||||||| | | || ||||| | Sbjct: 422 tagaaaagaaaggattgccgaaaaaccttgtacttggaagctgcacagtgcttgaaactg 481 Query: 275 ccgggcagggggcgcttggaacactatataaagttttagaatctgccattgcagatagag 334 | ||||||||||| ||||| ||| ||||||| ||||| ||||||||||||||||| |||| Sbjct: 482 cagggcagggggcacttggcacattatataaggttttggaatctgccattgcagaaagag 541 Query: 335 agaacgggtcatcagctcaggggcaaattatttgggtccactttggggtcaacagtggcg 394 |||| |||||||| |||||||||||| | |||||| |||| ||||| || || ||||| | Sbjct: 542 agaatgggtcatcggctcaggggcaagtaatttggatccattttggagttaatagtggtg 601 Query: 395 catcacggtttgctcttgagaatcaagctgtgaatgaagccaccttccgctgcccagatg 454 || || ||||||||||||||||||| ||||| || |||||||||||||| || ||||||| Sbjct: 602 caacaaggtttgctcttgagaatcaggctgttaacgaagccaccttccgttgtccagatg 661 Query: 455 agcttgggtggaagcctcagagagtccctattgttccatctgacggaagcatctcacgga 514 |||| |||||||| |||||||| || |||||||| ||||| || ||| ||||||||||| Sbjct: 662 agctagggtggaaacctcagagggttcctattgtaccatcggatggagccatctcacgga 721 Query: 515 caagagagactac 527 ||||||||||||| Sbjct: 722 caagagagactac 734
>gb|BT017484.1| Zea mays clone EL01N0412C09.c mRNA sequence Length = 1014 Score = 379 bits (191), Expect = e-102 Identities = 382/443 (86%), Gaps = 2/443 (0%) Strand = Plus / Plus Query: 95 aagggtaaatgggatcagaagggccttcaatcgtgactgtccatgttaccggatttaaga 154 ||||||||||||||||||||||||||||| | || |||||||||||||| |||||||||| Sbjct: 186 aagggtaaatgggatcagaagggccttcagttgtcactgtccatgttactggatttaaga 245 Query: 155 agtttcatggagttgctgagaacccgacagagaaacttgtgaccaatattaaatccttca 214 |||| ||||| |||||||||||||| || |||||| ||||||||||| ||||||| ||| Sbjct: 246 agttccatggggttgctgagaacccaaccgagaaaattgtgaccaatcttaaatctttct 305 Query: 215 ttgaaaagagagggttgccaaaaaatcttgtacttggaagctgtgaaattctcgaaacag 274 | |||||| |||||||||||||||||||||| || |||||||| | |||||||||||| Sbjct: 306 tggaaaagcgagggttgccaaaaaatcttgtcctcggaagctgcacagttctcgaaacag 365 Query: 275 ccgggcagggggcgcttggaacactatataaagttttagaatctgccattgcagatagag 334 | ||| | ||||| |||| ||| ||||||| |||||||| ||||| ||||||| |||| Sbjct: 366 caggggaaggggcacttgccacattatataaggttttagagtctgctgttgcagacagag 425 Query: 335 agaac-gggtcatcagctcaggggcaaattatttgggtccactttggggtcaacagtggc 393 |||| ||||| || || ||||| ||| | |||||| ||||||||||||||||||||||| Sbjct: 426 -gaactgggtcctcggcacagggacaagtaatttggatccactttggggtcaacagtggc 484 Query: 394 gcatcacggtttgctcttgagaatcaagctgtgaatgaagccaccttccgctgcccagat 453 ||| | ||||||| |||||||| |||||||| ||||| || |||||||| || |||||| Sbjct: 485 gcaataaggtttgcccttgagaaccaagctgttaatgaggctaccttccggtgtccagat 544 Query: 454 gagcttgggtggaagcctcagagagtccctattgttccatctgacggaagcatctcacgg 513 ||||| || ||||| || ||||| ||||||||||| || ||||| ||||||||||||||| Sbjct: 545 gagctaggatggaaaccacagagggtccctattgtgccctctgatggaagcatctcacgg 604 Query: 514 acaagagagactacactgccagt 536 || ||||||||||| |||||||| Sbjct: 605 acgagagagactaccctgccagt 627
>dbj|AK105043.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-A05, full insert sequence Length = 1012 Score = 375 bits (189), Expect = e-100 Identities = 369/429 (86%) Strand = Plus / Plus Query: 99 gtaaatgggatcagaagggccttcaatcgtgactgtccatgttaccggatttaagaagtt 158 ||||||||| |||||||| |||||| | || ||||| ||||| || |||||||||||||| Sbjct: 230 gtaaatgggttcagaaggaccttcagttgttactgtacatgtgactggatttaagaagtt 289 Query: 159 tcatggagttgctgagaacccgacagagaaacttgtgaccaatattaaatccttcattga 218 |||||| |||||||||||||| || |||||| ||||||||||| ||||||| ||| | || Sbjct: 290 tcatggggttgctgagaacccaactgagaaaattgtgaccaatcttaaatcattcgtgga 349 Query: 219 aaagagagggttgccaaaaaatcttgtacttggaagctgtgaaattctcgaaacagccgg 278 ||||| ||| ||||||||||| ||||| ||||||||||| | |||| ||||| || || Sbjct: 350 aaagaaaggattgccaaaaaaccttgtgcttggaagctgcacagttcttgaaactgcagg 409 Query: 279 gcagggggcgcttggaacactatataaagttttagaatctgccattgcagatagagagaa 338 ||||||||| ||||| ||| ||||||| ||||| |||||| ||||||| || || ||||| Sbjct: 410 gcagggggcacttggcacattatataaggttttggaatcttccattgcggaaagggagaa 469 Query: 339 cgggtcatcagctcaggggcaaattatttgggtccactttggggtcaacagtggcgcatc 398 |||||||| |||||||||||| | |||||| |||||||||| ||||| ||||| ||| | Sbjct: 470 tgggtcatcggctcaggggcaagtaatttggatccactttggagtcaatagtggtgcaac 529 Query: 399 acggtttgctcttgagaatcaagctgtgaatgaagccaccttccgctgcccagatgagct 458 | ||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| Sbjct: 530 aaggtttgctcttgagaatcaagctgttaatgaagccaccttccgttgtccagatgagct 589 Query: 459 tgggtggaagcctcagagagtccctattgttccatctgacggaagcatctcacggacaag 518 |||||||| |||||||| | || ||||| |||||||| ||| | |||||||| ||||| Sbjct: 590 agggtggaaacctcagagggctcccattgtgccatctgatggaggaatctcacgcacaag 649 Query: 519 agagactac 527 ||||||||| Sbjct: 650 agagactac 658
>dbj|AK067207.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096M06, full insert sequence Length = 1228 Score = 375 bits (189), Expect = e-100 Identities = 372/433 (85%) Strand = Plus / Plus Query: 95 aagggtaaatgggatcagaagggccttcaatcgtgactgtccatgttaccggatttaaga 154 ||||||||||||| |||||||| |||||| | || ||||||||||||||||||||||||| Sbjct: 303 aagggtaaatgggttcagaaggaccttcagttgttactgtccatgttaccggatttaaga 362 Query: 155 agtttcatggagttgctgagaacccgacagagaaacttgtgaccaatattaaatccttca 214 |||| ||||| |||||||||||||| || |||||| ||| | |||| ||||||| ||| Sbjct: 363 agttccatggggttgctgagaacccaactgagaaaattgagggcaatcttaaatcattcg 422 Query: 215 ttgaaaagagagggttgccaaaaaatcttgtacttggaagctgtgaaattctcgaaacag 274 | ||||||| ||| ||||| ||||| ||||||||||||||||| | | || ||||| | Sbjct: 423 tagaaaagaaaggattgccgaaaaaccttgtacttggaagctgcacagtgcttgaaactg 482 Query: 275 ccgggcagggggcgcttggaacactatataaagttttagaatctgccattgcagatagag 334 | ||||||||||| ||||| ||| ||||||| ||||| ||||||||||||||||| |||| Sbjct: 483 cagggcagggggcacttggcacattatataaggttttggaatctgccattgcagaaagag 542 Query: 335 agaacgggtcatcagctcaggggcaaattatttgggtccactttggggtcaacagtggcg 394 |||| |||||||| |||||||||||| | |||||| |||| ||||| || || ||||| | Sbjct: 543 agaatgggtcatcggctcaggggcaagtaatttggatccattttggagttaatagtggtg 602 Query: 395 catcacggtttgctcttgagaatcaagctgtgaatgaagccaccttccgctgcccagatg 454 || || ||||||||||||||||||| ||||| || |||||||||||||| || ||||||| Sbjct: 603 caacaaggtttgctcttgagaatcaggctgttaacgaagccaccttccgttgtccagatg 662 Query: 455 agcttgggtggaagcctcagagagtccctattgttccatctgacggaagcatctcacgga 514 |||| |||||||| |||||||| || |||||||| ||||| || ||| ||||||||||| Sbjct: 663 agctagggtggaaacctcagagggttcctattgtaccatcggatggagccatctcacgga 722 Query: 515 caagagagactac 527 ||||||||||||| Sbjct: 723 caagagagactac 735
>dbj|AK060069.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-H12, full insert sequence Length = 1012 Score = 375 bits (189), Expect = e-100 Identities = 369/429 (86%) Strand = Plus / Plus Query: 99 gtaaatgggatcagaagggccttcaatcgtgactgtccatgttaccggatttaagaagtt 158 ||||||||| |||||||| |||||| | || ||||| ||||| || |||||||||||||| Sbjct: 230 gtaaatgggttcagaaggaccttcagttgttactgtacatgtgactggatttaagaagtt 289 Query: 159 tcatggagttgctgagaacccgacagagaaacttgtgaccaatattaaatccttcattga 218 |||||| |||||||||||||| || |||||| ||||||||||| ||||||| ||| | || Sbjct: 290 tcatggggttgctgagaacccaactgagaaaattgtgaccaatcttaaatcattcgtgga 349 Query: 219 aaagagagggttgccaaaaaatcttgtacttggaagctgtgaaattctcgaaacagccgg 278 ||||| ||| ||||||||||| ||||| ||||||||||| | |||| ||||| || || Sbjct: 350 aaagaaaggattgccaaaaaaccttgtgcttggaagctgcacagttcttgaaactgcagg 409 Query: 279 gcagggggcgcttggaacactatataaagttttagaatctgccattgcagatagagagaa 338 ||||||||| ||||| ||| ||||||| ||||| |||||| ||||||| || || ||||| Sbjct: 410 gcagggggcacttggcacattatataaggttttggaatcttccattgcggaaagggagaa 469 Query: 339 cgggtcatcagctcaggggcaaattatttgggtccactttggggtcaacagtggcgcatc 398 |||||||| |||||||||||| | |||||| |||||||||| ||||| ||||| ||| | Sbjct: 470 tgggtcatcggctcaggggcaagtaatttggatccactttggagtcaatagtggtgcaac 529 Query: 399 acggtttgctcttgagaatcaagctgtgaatgaagccaccttccgctgcccagatgagct 458 | ||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| Sbjct: 530 aaggtttgctcttgagaatcaagctgttaatgaagccaccttccgttgtccagatgagct 589 Query: 459 tgggtggaagcctcagagagtccctattgttccatctgacggaagcatctcacggacaag 518 |||||||| |||||||| | || ||||| |||||||| ||| | |||||||| ||||| Sbjct: 590 agggtggaaacctcagagggctcccattgtgccatctgatggaggaatctcacgcacaag 649 Query: 519 agagactac 527 ||||||||| Sbjct: 650 agagactac 658
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 248 bits (125), Expect = 2e-62 Identities = 239/277 (86%) Strand = Plus / Minus Query: 95 aagggtaaatgggatcagaagggccttcaatcgtgactgtccatgttaccggatttaaga 154 ||||||||||||| |||||||| |||||| | || ||||||||||||||||||||||||| Sbjct: 26566893 aagggtaaatgggttcagaaggaccttcagttgttactgtccatgttaccggatttaaga 26566834 Query: 155 agtttcatggagttgctgagaacccgacagagaaacttgtgaccaatattaaatccttca 214 |||| ||||| |||||||||||||| || |||||| ||||| |||| ||||||| ||| Sbjct: 26566833 agttccatggggttgctgagaacccaactgagaaaattgtgggcaatcttaaatcattcg 26566774 Query: 215 ttgaaaagagagggttgccaaaaaatcttgtacttggaagctgtgaaattctcgaaacag 274 | ||||||| ||| ||||| ||||| ||||||||||||||||| | | || ||||| | Sbjct: 26566773 tagaaaagaaaggattgccgaaaaaccttgtacttggaagctgcacagtgcttgaaactg 26566714 Query: 275 ccgggcagggggcgcttggaacactatataaagttttagaatctgccattgcagatagag 334 | ||||||||||| ||||| ||| ||||||| ||||| ||||||||||||||||| |||| Sbjct: 26566713 cagggcagggggcacttggcacattatataaggttttggaatctgccattgcagaaagag 26566654 Query: 335 agaacgggtcatcagctcaggggcaaattatttgggt 371 |||| |||||||| |||||||||||| | |||||||| Sbjct: 26566653 agaatgggtcatcggctcaggggcaagtaatttgggt 26566617 Score = 95.6 bits (48), Expect = 1e-16 Identities = 90/104 (86%) Strand = Plus / Minus Query: 371 tccactttggggtcaacagtggcgcatcacggtttgctcttgagaatcaagctgtgaatg 430 |||| ||||| || || ||||| ||| || ||||||||||||||||||| ||||| || | Sbjct: 26566455 tccattttggagttaatagtggtgcaacaaggtttgctcttgagaatcaggctgttaacg 26566396 Query: 431 aagccaccttccgctgcccagatgagcttgggtggaagcctcag 474 ||||||||||||| || ||||||||||| |||||||| |||||| Sbjct: 26566395 aagccaccttccgttgtccagatgagctagggtggaaacctcag 26566352 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Minus Query: 472 cagagagtccctattgttccatctgacggaagcatctcacggacaagagag 522 ||||| || |||||||| ||||| || ||| ||||||||||||||||||| Sbjct: 26566277 cagagggttcctattgtaccatcggatggagccatctcacggacaagagag 26566227
>dbj|AP005292.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1340_C08 Length = 192167 Score = 248 bits (125), Expect = 2e-62 Identities = 239/277 (86%) Strand = Plus / Minus Query: 95 aagggtaaatgggatcagaagggccttcaatcgtgactgtccatgttaccggatttaaga 154 ||||||||||||| |||||||| |||||| | || ||||||||||||||||||||||||| Sbjct: 112164 aagggtaaatgggttcagaaggaccttcagttgttactgtccatgttaccggatttaaga 112105 Query: 155 agtttcatggagttgctgagaacccgacagagaaacttgtgaccaatattaaatccttca 214 |||| ||||| |||||||||||||| || |||||| ||||| |||| ||||||| ||| Sbjct: 112104 agttccatggggttgctgagaacccaactgagaaaattgtgggcaatcttaaatcattcg 112045 Query: 215 ttgaaaagagagggttgccaaaaaatcttgtacttggaagctgtgaaattctcgaaacag 274 | ||||||| ||| ||||| ||||| ||||||||||||||||| | | || ||||| | Sbjct: 112044 tagaaaagaaaggattgccgaaaaaccttgtacttggaagctgcacagtgcttgaaactg 111985 Query: 275 ccgggcagggggcgcttggaacactatataaagttttagaatctgccattgcagatagag 334 | ||||||||||| ||||| ||| ||||||| ||||| ||||||||||||||||| |||| Sbjct: 111984 cagggcagggggcacttggcacattatataaggttttggaatctgccattgcagaaagag 111925 Query: 335 agaacgggtcatcagctcaggggcaaattatttgggt 371 |||| |||||||| |||||||||||| | |||||||| Sbjct: 111924 agaatgggtcatcggctcaggggcaagtaatttgggt 111888 Score = 95.6 bits (48), Expect = 1e-16 Identities = 90/104 (86%) Strand = Plus / Minus Query: 371 tccactttggggtcaacagtggcgcatcacggtttgctcttgagaatcaagctgtgaatg 430 |||| ||||| || || ||||| ||| || ||||||||||||||||||| ||||| || | Sbjct: 111726 tccattttggagttaatagtggtgcaacaaggtttgctcttgagaatcaggctgttaacg 111667 Query: 431 aagccaccttccgctgcccagatgagcttgggtggaagcctcag 474 ||||||||||||| || ||||||||||| |||||||| |||||| Sbjct: 111666 aagccaccttccgttgtccagatgagctagggtggaaacctcag 111623 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Minus Query: 472 cagagagtccctattgttccatctgacggaagcatctcacggacaagagag 522 ||||| || |||||||| ||||| || ||| ||||||||||||||||||| Sbjct: 111548 cagagggttcctattgtaccatcggatggagccatctcacggacaagagag 111498
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 224 bits (113), Expect = 2e-55 Identities = 233/273 (85%) Strand = Plus / Plus Query: 99 gtaaatgggatcagaagggccttcaatcgtgactgtccatgttaccggatttaagaagtt 158 ||||||||| |||||||| |||||| | || ||||| ||||| || |||||||||||||| Sbjct: 13760329 gtaaatgggttcagaaggaccttcagttgttactgtacatgtgactggatttaagaagtt 13760388 Query: 159 tcatggagttgctgagaacccgacagagaaacttgtgaccaatattaaatccttcattga 218 |||||| |||||||||||||| || |||||| ||||||||||| ||||||| ||| | || Sbjct: 13760389 tcatggggttgctgagaacccaactgagaaaattgtgaccaatcttaaatcattcgtgga 13760448 Query: 219 aaagagagggttgccaaaaaatcttgtacttggaagctgtgaaattctcgaaacagccgg 278 ||||| ||| ||||||||||| ||||| ||||||||||| | |||| ||||| || || Sbjct: 13760449 aaagaaaggattgccaaaaaaccttgtgcttggaagctgcacagttcttgaaactgcagg 13760508 Query: 279 gcagggggcgcttggaacactatataaagttttagaatctgccattgcagatagagagaa 338 ||||||||| ||||| ||| ||||||| ||||| |||||| ||||||| || || ||||| Sbjct: 13760509 gcagggggcacttggcacattatataaggttttggaatcttccattgcggaaagggagaa 13760568 Query: 339 cgggtcatcagctcaggggcaaattatttgggt 371 |||||||| |||||||||||| | |||||||| Sbjct: 13760569 tgggtcatcggctcaggggcaagtaatttgggt 13760601 Score = 127 bits (64), Expect = 4e-26 Identities = 94/104 (90%) Strand = Plus / Plus Query: 371 tccactttggggtcaacagtggcgcatcacggtttgctcttgagaatcaagctgtgaatg 430 |||||||||| ||||| ||||| ||| || ||||||||||||||||||||||||| |||| Sbjct: 13760752 tccactttggagtcaatagtggtgcaacaaggtttgctcttgagaatcaagctgttaatg 13760811 Query: 431 aagccaccttccgctgcccagatgagcttgggtggaagcctcag 474 ||||||||||||| || ||||||||||| |||||||| |||||| Sbjct: 13760812 aagccaccttccgttgtccagatgagctagggtggaaacctcag 13760855
>dbj|AP005577.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1655_B12 Length = 132736 Score = 224 bits (113), Expect = 2e-55 Identities = 233/273 (85%) Strand = Plus / Plus Query: 99 gtaaatgggatcagaagggccttcaatcgtgactgtccatgttaccggatttaagaagtt 158 ||||||||| |||||||| |||||| | || ||||| ||||| || |||||||||||||| Sbjct: 9813 gtaaatgggttcagaaggaccttcagttgttactgtacatgtgactggatttaagaagtt 9872 Query: 159 tcatggagttgctgagaacccgacagagaaacttgtgaccaatattaaatccttcattga 218 |||||| |||||||||||||| || |||||| ||||||||||| ||||||| ||| | || Sbjct: 9873 tcatggggttgctgagaacccaactgagaaaattgtgaccaatcttaaatcattcgtgga 9932 Query: 219 aaagagagggttgccaaaaaatcttgtacttggaagctgtgaaattctcgaaacagccgg 278 ||||| ||| ||||||||||| ||||| ||||||||||| | |||| ||||| || || Sbjct: 9933 aaagaaaggattgccaaaaaaccttgtgcttggaagctgcacagttcttgaaactgcagg 9992 Query: 279 gcagggggcgcttggaacactatataaagttttagaatctgccattgcagatagagagaa 338 ||||||||| ||||| ||| ||||||| ||||| |||||| ||||||| || || ||||| Sbjct: 9993 gcagggggcacttggcacattatataaggttttggaatcttccattgcggaaagggagaa 10052 Query: 339 cgggtcatcagctcaggggcaaattatttgggt 371 |||||||| |||||||||||| | |||||||| Sbjct: 10053 tgggtcatcggctcaggggcaagtaatttgggt 10085 Score = 127 bits (64), Expect = 4e-26 Identities = 94/104 (90%) Strand = Plus / Plus Query: 371 tccactttggggtcaacagtggcgcatcacggtttgctcttgagaatcaagctgtgaatg 430 |||||||||| ||||| ||||| ||| || ||||||||||||||||||||||||| |||| Sbjct: 10236 tccactttggagtcaatagtggtgcaacaaggtttgctcttgagaatcaagctgttaatg 10295 Query: 431 aagccaccttccgctgcccagatgagcttgggtggaagcctcag 474 ||||||||||||| || ||||||||||| |||||||| |||||| Sbjct: 10296 aagccaccttccgttgtccagatgagctagggtggaaacctcag 10339
>dbj|AK099464.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013023I17, full insert sequence Length = 1114 Score = 119 bits (60), Expect = 1e-23 Identities = 120/140 (85%) Strand = Plus / Plus Query: 371 tccactttggggtcaacagtggcgcatcacggtttgctcttgagaatcaagctgtgaatg 430 |||| ||||| |||||||||||| || || ||||||| ||||||||||||||| | |||| Sbjct: 485 tccattttggagtcaacagtggcacaacaaggtttgcccttgagaatcaagctattaatg 544 Query: 431 aagccaccttccgctgcccagatgagcttgggtggaagcctcagagagtccctattgttc 490 |||| |||||||| ||||| |||||||| || ||||| || ||||| | ||||||||| Sbjct: 545 aagctaccttccgttgccctgatgagctgggatggaaaccacagagggcccctattgtgt 604 Query: 491 catctgacggaagcatctca 510 ||||||| |||||||||||| Sbjct: 605 catctgatggaagcatctca 624 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 139 gttaccggatttaagaagtttcatggagttgctgagaacccgacagagaaacttgtgacc 198 ||||| ||||| |||||||| |||||||| |||||||| ||||| ||||| ||||| | Sbjct: 253 gttactggattcaagaagttccatggagtcgctgagaatccgacggagaagattgtgcgc 312 Query: 199 aatattaaatccttcattgaaaagagagggttgcc 233 ||| || | || || || ||||||||||||||||| Sbjct: 313 aatcttgagtcatttatggaaaagagagggttgcc 347
>dbj|AK062116.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-C05, full insert sequence Length = 1164 Score = 119 bits (60), Expect = 1e-23 Identities = 120/140 (85%) Strand = Plus / Plus Query: 371 tccactttggggtcaacagtggcgcatcacggtttgctcttgagaatcaagctgtgaatg 430 |||| ||||| |||||||||||| || || ||||||| ||||||||||||||| | |||| Sbjct: 547 tccattttggagtcaacagtggcacaacaaggtttgcccttgagaatcaagctattaatg 606 Query: 431 aagccaccttccgctgcccagatgagcttgggtggaagcctcagagagtccctattgttc 490 |||| |||||||| ||||| |||||||| || ||||| || ||||| | ||||||||| Sbjct: 607 aagctaccttccgttgccctgatgagctgggatggaaaccacagagggcccctattgtgt 666 Query: 491 catctgacggaagcatctca 510 ||||||| |||||||||||| Sbjct: 667 catctgatggaagcatctca 686 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 139 gttaccggatttaagaagtttcatggagttgctgagaacccgacagagaaacttgtgacc 198 ||||| ||||| |||||||| |||||||| |||||||| ||||| ||||| ||||| | Sbjct: 315 gttactggattcaagaagttccatggagtcgctgagaatccgacggagaagattgtgcgc 374 Query: 199 aatattaaatccttcattgaaaagagagggttgcc 233 ||| || | || || || ||||||||||||||||| Sbjct: 375 aatcttgagtcatttatggaaaagagagggttgcc 409
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 89.7 bits (45), Expect = 9e-15 Identities = 84/97 (86%) Strand = Plus / Plus Query: 371 tccactttggggtcaacagtggcgcatcacggtttgctcttgagaatcaagctgtgaatg 430 |||| ||||| |||||||||||| || || ||||||| ||||||||||||||| | |||| Sbjct: 14271886 tccattttggagtcaacagtggcacaacaaggtttgcccttgagaatcaagctattaatg 14271945 Query: 431 aagccaccttccgctgcccagatgagcttgggtggaa 467 |||| |||||||| ||||| |||||||| || ||||| Sbjct: 14271946 aagctaccttccgttgccctgatgagctgggatggaa 14271982 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 139 gttaccggatttaagaagtttcatggagttgctgagaacccgacagagaaacttgtgacc 198 ||||| ||||| |||||||| |||||||| |||||||| ||||| ||||| ||||| | Sbjct: 14271347 gttactggattcaagaagttccatggagtcgctgagaatccgacggagaagattgtgcgc 14271406 Query: 199 aatattaaatccttcattgaaaagagagggttgcc 233 ||| || | || || || ||||||||||||||||| Sbjct: 14271407 aatcttgagtcatttatggaaaagagagggttgcc 14271441
>gb|AC082644.10| Oryza sativa chromosome 3 BAC OSJNBa0013M12 genomic sequence, complete sequence Length = 158714 Score = 89.7 bits (45), Expect = 9e-15 Identities = 84/97 (86%) Strand = Plus / Plus Query: 371 tccactttggggtcaacagtggcgcatcacggtttgctcttgagaatcaagctgtgaatg 430 |||| ||||| |||||||||||| || || ||||||| ||||||||||||||| | |||| Sbjct: 21115 tccattttggagtcaacagtggcacaacaaggtttgcccttgagaatcaagctattaatg 21174 Query: 431 aagccaccttccgctgcccagatgagcttgggtggaa 467 |||| |||||||| ||||| |||||||| || ||||| Sbjct: 21175 aagctaccttccgttgccctgatgagctgggatggaa 21211 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 139 gttaccggatttaagaagtttcatggagttgctgagaacccgacagagaaacttgtgacc 198 ||||| ||||| |||||||| |||||||| |||||||| ||||| ||||| ||||| | Sbjct: 20576 gttactggattcaagaagttccatggagtcgctgagaatccgacggagaagattgtgcgc 20635 Query: 199 aatattaaatccttcattgaaaagagagggttgcc 233 ||| || | || || || ||||||||||||||||| Sbjct: 20636 aatcttgagtcatttatggaaaagagagggttgcc 20670
>gb|AC144427.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNAb0012F18, complete sequence Length = 122159 Score = 89.7 bits (45), Expect = 9e-15 Identities = 84/97 (86%) Strand = Plus / Plus Query: 371 tccactttggggtcaacagtggcgcatcacggtttgctcttgagaatcaagctgtgaatg 430 |||| ||||| |||||||||||| || || ||||||| ||||||||||||||| | |||| Sbjct: 83274 tccattttggagtcaacagtggcacaacaaggtttgcccttgagaatcaagctattaatg 83333 Query: 431 aagccaccttccgctgcccagatgagcttgggtggaa 467 |||| |||||||| ||||| |||||||| || ||||| Sbjct: 83334 aagctaccttccgttgccctgatgagctgggatggaa 83370 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 139 gttaccggatttaagaagtttcatggagttgctgagaacccgacagagaaacttgtgacc 198 ||||| ||||| |||||||| |||||||| |||||||| ||||| ||||| ||||| | Sbjct: 82735 gttactggattcaagaagttccatggagtcgctgagaatccgacggagaagattgtgcgc 82794 Query: 199 aatattaaatccttcattgaaaagagagggttgcc 233 ||| || | || || || ||||||||||||||||| Sbjct: 82795 aatcttgagtcatttatggaaaagagagggttgcc 82829
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 89.7 bits (45), Expect = 9e-15 Identities = 84/97 (86%) Strand = Plus / Plus Query: 371 tccactttggggtcaacagtggcgcatcacggtttgctcttgagaatcaagctgtgaatg 430 |||| ||||| |||||||||||| || || ||||||| ||||||||||||||| | |||| Sbjct: 14266861 tccattttggagtcaacagtggcacaacaaggtttgcccttgagaatcaagctattaatg 14266920 Query: 431 aagccaccttccgctgcccagatgagcttgggtggaa 467 |||| |||||||| ||||| |||||||| || ||||| Sbjct: 14266921 aagctaccttccgttgccctgatgagctgggatggaa 14266957 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 139 gttaccggatttaagaagtttcatggagttgctgagaacccgacagagaaacttgtgacc 198 ||||| ||||| |||||||| |||||||| |||||||| ||||| ||||| ||||| | Sbjct: 14266322 gttactggattcaagaagttccatggagtcgctgagaatccgacggagaagattgtgcgc 14266381 Query: 199 aatattaaatccttcattgaaaagagagggttgcc 233 ||| || | || || || ||||||||||||||||| Sbjct: 14266382 aatcttgagtcatttatggaaaagagagggttgcc 14266416
>gb|AC124981.25| Mus musculus chromosome 5, clone RP24-170P20, complete sequence Length = 153767 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 25 ccaccaccaccactgctcccag 46 |||||||||||||||||||||| Sbjct: 49079 ccaccaccaccactgctcccag 49058
>gb|BC091579.1| Xenopus tropicalis cDNA clone MGC:97504 IMAGE:6995998, complete cds Length = 3786 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 10 cctcccccaacaatcccaccaccacc 35 ||||||||| |||||||||||||||| Sbjct: 1285 cctcccccaccaatcccaccaccacc 1310
>gb|AC167333.3| Mus musculus BAC clone RP23-92L4 from chromosome 5, complete sequence Length = 236596 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 25 ccaccaccaccactgctcccag 46 |||||||||||||||||||||| Sbjct: 187072 ccaccaccaccactgctcccag 187051
>ref|XM_802554.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053509567.60) partial mRNA Length = 1376 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 25 ccaccaccaccactgctccca 45 ||||||||||||||||||||| Sbjct: 1051 ccaccaccaccactgctccca 1071
>emb|CR450816.6| Zebrafish DNA sequence from clone CH211-210N14 in linkage group 7, complete sequence Length = 157141 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 ccctcccccaacaatcccacc 29 ||||||||||||||||||||| Sbjct: 5981 ccctcccccaacaatcccacc 6001
>gb|AC126605.4| Homo sapiens chromosome 15, clone RP11-606M5, complete sequence Length = 169125 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 419 aagctgtgaatgaagccacct 439 ||||||||||||||||||||| Sbjct: 62810 aagctgtgaatgaagccacct 62830
>gb|AC110291.6| Homo sapiens chromosome 15, clone RP11-379H8, complete sequence Length = 186812 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 419 aagctgtgaatgaagccacct 439 ||||||||||||||||||||| Sbjct: 99031 aagctgtgaatgaagccacct 99011
>gb|AC010724.6|AC010724 Homo sapiens BAC clone RP11-152F13 from 15, complete sequence Length = 157200 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 419 aagctgtgaatgaagccacct 439 ||||||||||||||||||||| Sbjct: 4408 aagctgtgaatgaagccacct 4428
>gb|AC040162.5| Homo sapiens chromosome 16 clone CTC-479C5, complete sequence Length = 217470 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 444 ctgcccagatgagcttgggtg 464 ||||||||||||||||||||| Sbjct: 204022 ctgcccagatgagcttgggtg 204042
>ref|NM_022675.1| Rattus norvegicus FK506 binding protein 1b (Fkbp1b), mRNA Length = 327 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 442 cgctgcccagatgagcttggg 462 ||||||||||||||||||||| Sbjct: 189 cgctgcccagatgagcttggg 209
>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome Length = 3573470 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 15 cccaacaatcccaccaccaccactgctcccagg 47 ||||| |||||||||||| |||| ||||||||| Sbjct: 2494855 cccaataatcccaccaccgccaccgctcccagg 2494823
>gb|U38308.1|SCU38308 Simian cytomegalovirus major immediate early transcription unit IE94 Length = 11860 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 caccaccaccactgctcccag 46 ||||||||||||||||||||| Sbjct: 8194 caccaccaccactgctcccag 8214
>emb|CR388156.7| Zebrafish DNA sequence from clone DKEY-15B23 in linkage group 7, complete sequence Length = 215806 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 ccctcccccaacaatcccacc 29 ||||||||||||||||||||| Sbjct: 168670 ccctcccccaacaatcccacc 168650
>emb|BX679675.28| Zebrafish DNA sequence from clone CH211-37L23 in linkage group 17, complete sequence Length = 119154 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 ccctcccccaacaatcccacc 29 ||||||||||||||||||||| Sbjct: 82241 ccctcccccaacaatcccacc 82261
>gb|U27902.1|SVU27902 Stealth virus 1 clone 3B546 T7 Length = 342 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 26 caccaccaccactgctcccag 46 ||||||||||||||||||||| Sbjct: 217 caccaccaccactgctcccag 197
>gb|U26035.1|SVU26035 Stealth virus transactivator IE2 homolog, partial cds Length = 663 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 26 caccaccaccactgctcccag 46 ||||||||||||||||||||| Sbjct: 98 caccaccaccactgctcccag 118
>dbj|D86642.1| Rattus norvegicus mRNA for FK506-binding protein 12.6, complete cds Length = 327 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 442 cgctgcccagatgagcttggg 462 ||||||||||||||||||||| Sbjct: 189 cgctgcccagatgagcttggg 209
>ref|XM_523138.1| PREDICTED: Pan troglodytes similar to cytoplasmic polyadenylation element-binding protein (CPEB) (LOC467743), mRNA Length = 2097 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 agctgtgaatgaagccacct 439 |||||||||||||||||||| Sbjct: 1254 agctgtgaatgaagccacct 1273
>ref|NM_030594.2| Homo sapiens cytoplasmic polyadenylation element binding protein 1 (CPEB1), mRNA Length = 2777 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 agctgtgaatgaagccacct 439 |||||||||||||||||||| Sbjct: 1175 agctgtgaatgaagccacct 1194
>gb|AC156992.13| Mus musculus chromosome 7, clone RP23-474C17, complete sequence Length = 178169 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 10 cctcccccaacaatcccaccaccaccac 37 |||||||||||| |||||||||||||| Sbjct: 153116 cctcccccaacacccccaccaccaccac 153089
>ref|XM_874055.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S17, transcript variant 3 (LOC514174), mRNA Length = 2032 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 agctgtgaatgaagccacct 439 |||||||||||||||||||| Sbjct: 867 agctgtgaatgaagccacct 886
>ref|XM_864691.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S17, transcript variant 2 (LOC514174), mRNA Length = 1970 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 agctgtgaatgaagccacct 439 |||||||||||||||||||| Sbjct: 877 agctgtgaatgaagccacct 896
>gb|AF252827.5| Homo sapiens chromosome 8 clone RP11-166E20 map q24.13, complete sequence Length = 165347 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 aatcccaccaccaccactgc 40 |||||||||||||||||||| Sbjct: 44790 aatcccaccaccaccactgc 44771
>emb|CR956650.4| Pig DNA sequence from clone CH242-171I16 on chromosome 6, complete sequence Length = 165704 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 cccaccaccaccactgctcc 43 |||||||||||||||||||| Sbjct: 5958 cccaccaccaccactgctcc 5977
>gb|AC125543.3| Mus musculus BAC clone RP23-360H5 from chromosome 12, complete sequence Length = 184081 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 atttgggtccactttggggt 383 |||||||||||||||||||| Sbjct: 69536 atttgggtccactttggggt 69517
>gb|BC050629.1| Homo sapiens cytoplasmic polyadenylation element binding protein 1, mRNA (cDNA clone MGC:60106 IMAGE:6047179), complete cds Length = 2117 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 agctgtgaatgaagccacct 439 |||||||||||||||||||| Sbjct: 965 agctgtgaatgaagccacct 984
>gb|BC035348.1| Homo sapiens cytoplasmic polyadenylation element binding protein 1, mRNA (cDNA clone MGC:34136 IMAGE:5195793), complete cds Length = 2080 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 agctgtgaatgaagccacct 439 |||||||||||||||||||| Sbjct: 886 agctgtgaatgaagccacct 905
>gb|AC165350.3| Mus musculus BAC clone RP23-249A17 from chromosome 12, complete sequence Length = 227048 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 364 atttgggtccactttggggt 383 |||||||||||||||||||| Sbjct: 182967 atttgggtccactttggggt 182986
>emb|CR860287.1| Pongo pygmaeus mRNA; cDNA DKFZp459E225 (from clone DKFZp459E225) Length = 3328 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 agctgtgaatgaagccacct 439 |||||||||||||||||||| Sbjct: 1099 agctgtgaatgaagccacct 1118
>emb|AL845512.9| Zebrafish DNA sequence from clone CH211-286M4 in linkage group 4 Contains the gene for a novel protein similar to mouse and human F-box protein 7 (FBXO7), the gene for a novel protein similar to human exportin tRNA (nuclear export receptor for tRNAs) (XPOT), the gene for a novel protein similar to parathyroid hormone-like hormone (PTHLH), the 3' end of a novel gene, a novel gene and two CpG islands, complete sequence Length = 192940 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 acactatataaagttttaga 314 |||||||||||||||||||| Sbjct: 95755 acactatataaagttttaga 95736
>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB Length = 1683333 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 316 tctgccattgcagatagaga 335 |||||||||||||||||||| Sbjct: 557576 tctgccattgcagatagaga 557557
>gb|BC096589.1| Mus musculus zinc finger protein 526, mRNA (cDNA clone MGC:106217 IMAGE:5341568), complete cds Length = 1695 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 10 cctcccccaacaatcccaccaccaccac 37 |||||||||||| |||||||||||||| Sbjct: 584 cctcccccaacacccccaccaccaccac 611
>emb|CR591339.1| full-length cDNA clone CS0DC009YL21 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1567 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 agctgtgaatgaagccacct 439 |||||||||||||||||||| Sbjct: 480 agctgtgaatgaagccacct 499
>dbj|AK023265.1| Homo sapiens cDNA FLJ13203 fis, clone NT2RP3004504, highly similar to M.musculus mRNA for CPEB protein Length = 1923 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 agctgtgaatgaagccacct 439 |||||||||||||||||||| Sbjct: 798 agctgtgaatgaagccacct 817
>gb|AC100871.2| Homo sapiens chromosome 8, clone RP11-959I15, complete sequence Length = 215314 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 aatcccaccaccaccactgc 40 |||||||||||||||||||| Sbjct: 173738 aatcccaccaccaccactgc 173757
>ref|NM_175436.2| Mus musculus zinc finger protein 526 (Zfp526), mRNA Length = 3355 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 10 cctcccccaacaatcccaccaccaccac 37 |||||||||||| |||||||||||||| Sbjct: 691 cctcccccaacacccccaccaccaccac 718
>dbj|AK051798.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130095E08 product:weakly similar to DNA-BINDING PROTEIN (FRAGMENT) [Homo sapiens], full insert sequence Length = 2535 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 10 cctcccccaacaatcccaccaccaccac 37 |||||||||||| |||||||||||||| Sbjct: 687 cctcccccaacacccccaccaccaccac 714
>dbj|AK050839.1| Mus musculus 9 days embryo whole body cDNA, RIKEN full-length enriched library, clone:D030024H03 product:weakly similar to DNA-BINDING PROTEIN (FRAGMENT) [Homo sapiens], full insert sequence Length = 3355 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 10 cctcccccaacaatcccaccaccaccac 37 |||||||||||| |||||||||||||| Sbjct: 691 cctcccccaacacccccaccaccaccac 718
>gb|AC011824.8|AC011824 Homo sapiens chromosome , clone RP11-31I22, complete sequence Length = 141738 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 13 cccccaacaatcccaccaccaccactgc 40 |||||| || |||||||||||||||||| Sbjct: 61251 cccccaccactcccaccaccaccactgc 61278
>gb|BC052548.1| Mus musculus zinc finger protein 526, mRNA (cDNA clone IMAGE:1447049) Length = 1873 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 10 cctcccccaacaatcccaccaccaccac 37 |||||||||||| |||||||||||||| Sbjct: 644 cctcccccaacacccccaccaccaccac 671
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 aagctgtgaaattctcgaaa 271 |||||||||||||||||||| Sbjct: 22431499 aagctgtgaaattctcgaaa 22431480
>gb|AC020604.9| Homo sapiens BAC clone RP11-536C12 from 2, complete sequence Length = 130506 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 359 aaattatttgggtccactttgggg 382 ||||||||||| |||||||||||| Sbjct: 19973 aaattatttggatccactttgggg 19950
>gb|AC092667.3| Homo sapiens BAC clone RP11-549H5 from 2, complete sequence Length = 172574 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 cccaacaatcccaccaccac 34 |||||||||||||||||||| Sbjct: 172405 cccaacaatcccaccaccac 172424
>gb|AF329403.1|AF329403 Homo sapiens cytoplasmic polyadenylation element-binding protein short form (CPEB1) mRNA, complete cds Length = 2443 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 agctgtgaatgaagccacct 439 |||||||||||||||||||| Sbjct: 841 agctgtgaatgaagccacct 860
>gb|AF329402.1|AF329402 Homo sapiens cytoplasmic polyadenylation element-binding protein long form (CPEB1) mRNA, complete cds Length = 2777 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 agctgtgaatgaagccacct 439 |||||||||||||||||||| Sbjct: 1175 agctgtgaatgaagccacct 1194
>dbj|AK173308.1| Mus musculus premature mRNA for mKIAA1951 protein Length = 2721 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 10 cctcccccaacaatcccaccaccaccac 37 |||||||||||| |||||||||||||| Sbjct: 667 cctcccccaacacccccaccaccaccac 694
>gb|AC104782.5| Homo sapiens BAC clone RP11-30G7 from 2, complete sequence Length = 150010 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 cccaacaatcccaccaccac 34 |||||||||||||||||||| Sbjct: 1831 cccaacaatcccaccaccac 1850
>emb|BX649159.1|HSM809311 Homo sapiens mRNA; cDNA DKFZp686F0129 (from clone DKFZp686F0129) Length = 4973 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 agctgtgaatgaagccacct 439 |||||||||||||||||||| Sbjct: 2744 agctgtgaatgaagccacct 2763
>gb|AC134462.5| Mus musculus BAC clone RP23-391L12 from chromosome 12, complete sequence Length = 197870 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 364 atttgggtccactttggggt 383 |||||||||||||||||||| Sbjct: 141471 atttgggtccactttggggt 141490
>emb|AL832156.1|HSM803463 Homo sapiens mRNA; cDNA DKFZp686F2014 (from clone DKFZp686F2014) Length = 2900 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 agctgtgaatgaagccacct 439 |||||||||||||||||||| Sbjct: 666 agctgtgaatgaagccacct 685
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 aagctgtgaaattctcgaaa 271 |||||||||||||||||||| Sbjct: 22359844 aagctgtgaaattctcgaaa 22359825
>emb|AL732640.4|CNS08C9F Oryza sativa chromosome 12, . BAC OSJNBa0022K16 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 183414 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 aagctgtgaaattctcgaaa 271 |||||||||||||||||||| Sbjct: 76035 aagctgtgaaattctcgaaa 76054
>gb|AC124210.3| Homo sapiens chromosome 8 clone RP11-755E24 map q24.13, complete sequence Length = 138875 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 aatcccaccaccaccactgc 40 |||||||||||||||||||| Sbjct: 42706 aatcccaccaccaccactgc 42687
>gb|AC130824.4| Mus musculus BAC clone RP23-349B5 from 12, complete sequence Length = 178133 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 364 atttgggtccactttggggt 383 |||||||||||||||||||| Sbjct: 99146 atttgggtccactttggggt 99165
>dbj|AP001578.3| Homo sapiens genomic DNA, chromosome 6q25.2, clone:KB1954F7 Length = 239057 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 atattaaatccttcattgaa 219 |||||||||||||||||||| Sbjct: 197532 atattaaatccttcattgaa 197551 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,225,071 Number of Sequences: 3902068 Number of extensions: 5225071 Number of successful extensions: 105060 Number of sequences better than 10.0: 70 Number of HSP's better than 10.0 without gapping: 70 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 104693 Number of HSP's gapped (non-prelim): 363 length of query: 544 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 521 effective length of database: 17,143,297,704 effective search space: 8931658103784 effective search space used: 8931658103784 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)