ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal36d21
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1HYPA_CLOPE (Q46205) Protein hypA 47 2e-05
2DLX5_CHICK (P50577) Homeobox protein DLX-5 (cDlx) 28 8.9

>HYPA_CLOPE (Q46205) Protein hypA|
          Length = 973

 Score = 46.6 bits (109), Expect = 2e-05
 Identities = 21/54 (38%), Positives = 31/54 (57%)
 Frame = +2

Query: 5   NEAIVIPTQVNYVGKXGNPXQSGYQLNGSAYVISKHISNTWLWDRVRVXGGAYG 166
           NE ++    V YV K GN    GY+ +G+  ++   +   +LW+ VRV GGAYG
Sbjct: 783 NEGLLTQGNVQYVAKGGNYKTHGYKYSGALSLLESILGFDYLWNAVRVKGGAYG 836



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>DLX5_CHICK (P50577) Homeobox protein DLX-5 (cDlx)|
          Length = 286

 Score = 27.7 bits (60), Expect = 8.9
 Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = +2

Query: 23  PTQVNYVGKXGNPXQSGYQLNGSAYVI-SKHISNTWLWDRVRVXGGAYG 166
           PT  +Y GK  NP Q  Y +NGSA    +K  ++          GGAYG
Sbjct: 61  PTSASY-GKALNPYQYQYGMNGSAGTYPAKAYADYGYGSPYHQYGGAYG 108


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,689,717
Number of Sequences: 219361
Number of extensions: 358558
Number of successful extensions: 927
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 924
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 927
length of database: 80,573,946
effective HSP length: 30
effective length of database: 73,993,116
effective search space used: 1775834784
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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