| Clone Name | baal35o21 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK104088.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-D06, full insert sequence Length = 1373 Score = 258 bits (130), Expect = 2e-65 Identities = 284/336 (84%), Gaps = 6/336 (1%) Strand = Plus / Plus Query: 251 atcatggcaccgcgcaacagaacttcatctagaaggcctctctgggtcatcatcttgatt 310 |||||||||||||||||||| ||||| ||||||||||||||||| | ||||||||||| Sbjct: 52 atcatggcaccgcgcaacaggtcttcagctagaaggcctctctggattgtcatcttgatt 111 Query: 311 gcttttgtatgtgcgatagtcactggagcctatctttataaaccccagcattacacgggn 370 |||||||| ||||| ||| || ||||||||||||||||| ||||||||||||||| Sbjct: 112 gcttttgtctgtgcagtaggcattggagcctatctttatacaccccagcattacacacct 171 Query: 371 tgctacttg------tcaaattcctgtggttctcagcctcctccagtgcctgtgagagta 424 || |||||| |||||||||||| |||||| ||||||||||| |||| || || Sbjct: 172 tgttacttggtgtcatcaaattcctgtagttctcggcctcctccagaacctgctagggtt 231 Query: 425 tacaccgatgatgagatcgctgctcgtgctgtaatgagagacattgttctgtccccgcct 484 ||||| ||||||||||| ||||||||| ||| || ||||| || || || | | ||| Sbjct: 232 tacactgatgatgagattgctgctcgtattgtcataagagatatcattttggcacagcca 291 Query: 485 gttcactcgaagaatccgaaaattgctttcatgttcttgacacccagttcattgcctttt 544 ||||| || |||||||| |||||||||||||||||||||||||||||||||||||| || Sbjct: 292 gttcagtcaaagaatccaaaaattgctttcatgttcttgacacccagttcattgccattc 351 Query: 545 gagaagctttgggaaaaattcttcatgggacatgaa 580 ||||||||||||||||| ||||||||||| |||||| Sbjct: 352 gagaagctttgggaaaagttcttcatggggcatgaa 387
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 250 bits (126), Expect = 4e-63 Identities = 277/328 (84%), Gaps = 6/328 (1%) Strand = Plus / Minus Query: 251 atcatggcaccgcgcaacagaacttcatctagaaggcctctctgggtcatcatcttgatt 310 |||||||||||||||||||| ||||| ||||||||||||||||| | ||||||||||| Sbjct: 28949957 atcatggcaccgcgcaacaggtcttcagctagaaggcctctctggattgtcatcttgatt 28949898 Query: 311 gcttttgtatgtgcgatagtcactggagcctatctttataaaccccagcattacacgggn 370 |||||||| ||||| ||| || ||||||||||||||||| ||||||||||||||| Sbjct: 28949897 gcttttgtctgtgcagtaggcattggagcctatctttatacaccccagcattacacacct 28949838 Query: 371 tgctacttg------tcaaattcctgtggttctcagcctcctccagtgcctgtgagagta 424 || |||||| |||||||||||| |||||| ||||||||||| |||| || || Sbjct: 28949837 tgttacttggtgtcatcaaattcctgtagttctcggcctcctccagaacctgctagggtt 28949778 Query: 425 tacaccgatgatgagatcgctgctcgtgctgtaatgagagacattgttctgtccccgcct 484 ||||| ||||||||||| ||||||||| ||| || ||||| || || || | | ||| Sbjct: 28949777 tacactgatgatgagattgctgctcgtattgtcataagagatatcattttggcacagcca 28949718 Query: 485 gttcactcgaagaatccgaaaattgctttcatgttcttgacacccagttcattgcctttt 544 ||||| || |||||||| |||||||||||||||||||||||||||||||||||||| || Sbjct: 28949717 gttcagtcaaagaatccaaaaattgctttcatgttcttgacacccagttcattgccattc 28949658 Query: 545 gagaagctttgggaaaaattcttcatgg 572 ||||||||||||||||| |||||||||| Sbjct: 28949657 gagaagctttgggaaaagttcttcatgg 28949630
>dbj|AP004278.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0468G03 Length = 143918 Score = 250 bits (126), Expect = 4e-63 Identities = 277/328 (84%), Gaps = 6/328 (1%) Strand = Plus / Minus Query: 251 atcatggcaccgcgcaacagaacttcatctagaaggcctctctgggtcatcatcttgatt 310 |||||||||||||||||||| ||||| ||||||||||||||||| | ||||||||||| Sbjct: 100001 atcatggcaccgcgcaacaggtcttcagctagaaggcctctctggattgtcatcttgatt 99942 Query: 311 gcttttgtatgtgcgatagtcactggagcctatctttataaaccccagcattacacgggn 370 |||||||| ||||| ||| || ||||||||||||||||| ||||||||||||||| Sbjct: 99941 gcttttgtctgtgcagtaggcattggagcctatctttatacaccccagcattacacacct 99882 Query: 371 tgctacttg------tcaaattcctgtggttctcagcctcctccagtgcctgtgagagta 424 || |||||| |||||||||||| |||||| ||||||||||| |||| || || Sbjct: 99881 tgttacttggtgtcatcaaattcctgtagttctcggcctcctccagaacctgctagggtt 99822 Query: 425 tacaccgatgatgagatcgctgctcgtgctgtaatgagagacattgttctgtccccgcct 484 ||||| ||||||||||| ||||||||| ||| || ||||| || || || | | ||| Sbjct: 99821 tacactgatgatgagattgctgctcgtattgtcataagagatatcattttggcacagcca 99762 Query: 485 gttcactcgaagaatccgaaaattgctttcatgttcttgacacccagttcattgcctttt 544 ||||| || |||||||| |||||||||||||||||||||||||||||||||||||| || Sbjct: 99761 gttcagtcaaagaatccaaaaattgctttcatgttcttgacacccagttcattgccattc 99702 Query: 545 gagaagctttgggaaaaattcttcatgg 572 ||||||||||||||||| |||||||||| Sbjct: 99701 gagaagctttgggaaaagttcttcatgg 99674
>dbj|AK072266.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023006H21, full insert sequence Length = 1574 Score = 250 bits (126), Expect = 4e-63 Identities = 283/336 (84%), Gaps = 6/336 (1%) Strand = Plus / Plus Query: 251 atcatggcaccgcgcaacagaacttcatctagaaggcctctctgggtcatcatcttgatt 310 |||||||||||||||||||| ||||| ||||||||||||||||| | ||||||||||| Sbjct: 270 atcatggcaccgcgcaacaggtcttcagctagaaggcctctctggattgtcatcttgatt 329 Query: 311 gcttttgtatgtgcgatagtcactggagcctatctttataaaccccagcattacacgggn 370 |||||||| ||||| ||| || ||||||||||||||||| ||||||||||||||| Sbjct: 330 gcttttgtctgtgcagtaggcattggagcctatctttatacaccccagcattacacacct 389 Query: 371 tgctacttg------tcaaattcctgtggttctcagcctcctccagtgcctgtgagagta 424 || |||||| |||||||||||| |||||| ||||||||||| |||| || || Sbjct: 390 tgttacttggtgtcatcaaattcctgtagttctcggcctcctccagaacctgctagggtt 449 Query: 425 tacaccgatgatgagatcgctgctcgtgctgtaatgagagacattgttctgtccccgcct 484 ||||| ||||||||||| ||||||||| ||| | ||||| || || || | | ||| Sbjct: 450 tacactgatgatgagattgctgctcgtattgtcgtaagagatatcattttggcacagcca 509 Query: 485 gttcactcgaagaatccgaaaattgctttcatgttcttgacacccagttcattgcctttt 544 ||||| || |||||||| |||||||||||||||||||||||||||||||||||||| || Sbjct: 510 gttcagtcaaagaatccaaaaattgctttcatgttcttgacacccagttcattgccattc 569 Query: 545 gagaagctttgggaaaaattcttcatgggacatgaa 580 ||||||||||||||||| ||||||||||| |||||| Sbjct: 570 gagaagctttgggaaaagttcttcatggggcatgaa 605
>gb|AY105172.1| Zea mays PCO111195 mRNA sequence Length = 1034 Score = 172 bits (87), Expect = 8e-40 Identities = 162/187 (86%) Strand = Plus / Plus Query: 394 ttctcagcctcctccagtgcctgtgagagtatacaccgatgatgagatcgctgctcgtgc 453 ||||| ||||||||||| |||| || |||||||| ||||||||||||||||||||||| Sbjct: 532 ttctcggcctcctccagaacctgctagggtatacactgatgatgagatcgctgctcgtgc 591 Query: 454 tgtaatgagagacattgttctgtccccgcctgttcactcgaagaatccgaaaattgcttt 513 | | ||||||||||| | | | | | ||| || || || |||||||| ||||||||||| Sbjct: 592 tatcatgagagacatcatccgggcacggccagtgcagtcaaagaatccaaaaattgcttt 651 Query: 514 catgttcttgacacccagttcattgccttttgagaagctttgggaaaaattcttcatggg 573 |||||||||||| |||||||||||||| |||||||| || |||||||||||||||||||| Sbjct: 652 catgttcttgacgcccagttcattgccatttgagaaactgtgggaaaaattcttcatggg 711 Query: 574 acatgaa 580 ||||||| Sbjct: 712 acatgaa 718 Score = 56.0 bits (28), Expect = 1e-04 Identities = 82/100 (82%) Strand = Plus / Plus Query: 251 atcatggcaccgcgcaacagaacttcatctagaaggcctctctgggtcatcatcttgatt 310 ||||||||||| |||| || |||| |||| ||||||||||||| ||||| | ||| || Sbjct: 383 atcatggcaccacgcagtaggccttcgtctaaaaggcctctctggttcatcgtgttggtt 442 Query: 311 gcttttgtatgtgcgatagtcactggagcctatctttata 350 || ||||| ||||| ||| || ||||||||| ||||||| Sbjct: 443 gcatttgtctgtgcagtagccattggagcctacctttata 482
>gb|BT018630.1| Zea mays clone EL01N0503E01.d mRNA sequence Length = 1996 Score = 141 bits (71), Expect = 3e-30 Identities = 158/187 (84%) Strand = Plus / Plus Query: 394 ttctcagcctcctccagtgcctgtgagagtatacaccgatgatgagatcgctgctcgtgc 453 ||||| ||||||||||| |||| || |||||||| ||||||||||| |||||||||| Sbjct: 629 ttctcggcctcctccagaacctgctagggtatacactgatgatgagattgctgctcgtgt 688 Query: 454 tgtaatgagagacattgttctgtccccgcctgttcactcgaagaatccgaaaattgcttt 513 | | ||||||||||| ||| | | | ||| || || || ||||| | ||||||||||| Sbjct: 689 tatcatgagagacatcattcgggctcggccagtgcagtcaaagaacacaaaaattgcttt 748 Query: 514 catgttcttgacacccagttcattgccttttgagaagctttgggaaaaattcttcatggg 573 ||||||||| |||||||||| |||||| ||||||||||| |||||||||||||||||||| Sbjct: 749 catgttcttaacacccagtttattgccatttgagaagctatgggaaaaattcttcatggg 808 Query: 574 acatgaa 580 |||||| Sbjct: 809 tcatgaa 815 Score = 71.9 bits (36), Expect = 2e-09 Identities = 96/116 (82%) Strand = Plus / Plus Query: 251 atcatggcaccgcgcaacagaacttcatctagaaggcctctctgggtcatcatcttgatt 310 ||||||||||| |||| || || |||||||||||||||||||| |||| ||||| || Sbjct: 480 atcatggcaccacgcagtagggctccatctagaaggcctctctggttcattgtcttggtt 539 Query: 311 gcttttgtatgtgcgatagtcactggagcctatctttataaaccccagcattacac 366 || ||||| |||| ||| || ||||||||||||||||| || ||||||||||| Sbjct: 540 gcctttgtctgtgtagtagccattggagcctatctttatactccacagcattacac 595
>gb|BT018993.1| Zea mays clone Contig481.F mRNA sequence Length = 1538 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 506 attgctttcatgttcttgacacccagttcattgccttttgagaagctttgggaaaaatt 564 ||||| || |||||||||||||| |||||||||||||||||||| | ||||| ||||| Sbjct: 523 attgcctttatgttcttgacaccgggttcattgccttttgagaagttgtgggagaaatt 581
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 61.9 bits (31), Expect = 2e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 490 ctcgaagaatccgaaaattgctttcatgttcttgacacccagttcattgccttttgagaa 549 |||||||||||| || ||||| || |||||||| ||||| |||||||||| |||||||| Sbjct: 4130154 ctcgaagaatccaaagattgccttgatgttcttaacaccaggttcattgccctttgagaa 4130213 Query: 550 gctttgggaaaaatt 564 || ||||| ||||| Sbjct: 4130214 actatgggagaaatt 4130228
>dbj|AP003992.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1077_E05 Length = 116305 Score = 61.9 bits (31), Expect = 2e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 490 ctcgaagaatccgaaaattgctttcatgttcttgacacccagttcattgccttttgagaa 549 |||||||||||| || ||||| || |||||||| ||||| |||||||||| |||||||| Sbjct: 40168 ctcgaagaatccaaagattgccttgatgttcttaacaccaggttcattgccctttgagaa 40227 Query: 550 gctttgggaaaaatt 564 || ||||| ||||| Sbjct: 40228 actatgggagaaatt 40242
>dbj|AK067170.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098C06, full insert sequence Length = 1968 Score = 61.9 bits (31), Expect = 2e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 490 ctcgaagaatccgaaaattgctttcatgttcttgacacccagttcattgccttttgagaa 549 |||||||||||| || ||||| || |||||||| ||||| |||||||||| |||||||| Sbjct: 664 ctcgaagaatccaaagattgccttgatgttcttaacaccaggttcattgccctttgagaa 723 Query: 550 gctttgggaaaaatt 564 || ||||| ||||| Sbjct: 724 actatgggagaaatt 738
>ref|NM_119152.3| Arabidopsis thaliana unknown protein AT4G30060 mRNA, complete cds Length = 2003 Score = 60.0 bits (30), Expect = 8e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 503 aaaattgctttcatgttcttgacacccagttcattgccttttgagaagctttgggaaaaa 562 ||||||||||||||||| || || || || ||||||||||||||| ||||||||| | | Sbjct: 831 aaaattgctttcatgtttttaactcctggtacattgccttttgagaggctttgggacaga 890 Query: 563 ttcttcatgggacatgaa 580 || ||| |||| |||||| Sbjct: 891 tttttcctgggccatgaa 908
>gb|AY114648.1| Arabidopsis thaliana putative protein (At4g30060) mRNA, complete cds Length = 1376 Score = 60.0 bits (30), Expect = 8e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 503 aaaattgctttcatgttcttgacacccagttcattgccttttgagaagctttgggaaaaa 562 ||||||||||||||||| || || || || ||||||||||||||| ||||||||| | | Sbjct: 325 aaaattgctttcatgtttttaactcctggtacattgccttttgagaggctttgggacaga 384 Query: 563 ttcttcatgggacatgaa 580 || ||| |||| |||||| Sbjct: 385 tttttcctgggccatgaa 402
>gb|AY062601.1| Arabidopsis thaliana putative protein (At4g30060; F6G3.90) mRNA, complete cds Length = 2003 Score = 60.0 bits (30), Expect = 8e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 503 aaaattgctttcatgttcttgacacccagttcattgccttttgagaagctttgggaaaaa 562 ||||||||||||||||| || || || || ||||||||||||||| ||||||||| | | Sbjct: 831 aaaattgctttcatgtttttaactcctggtacattgccttttgagaggctttgggacaga 890 Query: 563 ttcttcatgggacatgaa 580 || ||| |||| |||||| Sbjct: 891 tttttcctgggccatgaa 908
>emb|AL161576.2|ATCHRIV72 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 72 Length = 198924 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 503 aaaattgctttcatgttcttgacacccagttcattgccttttgagaagctttggga 558 ||||||||||||||||| || || || || ||||||||||||||| ||||||||| Sbjct: 30846 aaaattgctttcatgtttttaactcctggtacattgccttttgagaggctttggga 30791
>emb|AL078464.1|ATF6G3 Arabidopsis thaliana DNA chromosome 4, BAC clone F6G3 (ESSA project) Length = 93953 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 503 aaaattgctttcatgttcttgacacccagttcattgccttttgagaagctttggga 558 ||||||||||||||||| || || || || ||||||||||||||| ||||||||| Sbjct: 28017 aaaattgctttcatgtttttaactcctggtacattgccttttgagaggctttggga 27962
>ref|NM_118720.2| Arabidopsis thaliana unknown protein AT4G25870 mRNA, complete cds Length = 1513 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Plus Query: 503 aaaattgctttcatgttcttgacacccagttcattgccttttgagaagctttgggaaaaa 562 ||||| |||||| |||||||||| ||| || | ||||| ||||||||||| ||||| || Sbjct: 498 aaaatcgctttcttgttcttgactcccggtactttgccatttgagaagctctgggatgaa 557 Query: 563 ttcttcatgggacatgaa 580 || |||| ||| |||||| Sbjct: 558 tttttcaagggtcatgaa 575
>gb|BT015602.1| Arabidopsis thaliana At4g25870 mRNA sequence Length = 1053 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Plus Query: 503 aaaattgctttcatgttcttgacacccagttcattgccttttgagaagctttgggaaaaa 562 ||||| |||||| |||||||||| ||| || | ||||| ||||||||||| ||||| || Sbjct: 178 aaaatcgctttcttgttcttgactcccggtactttgccatttgagaagctctgggatgaa 237 Query: 563 ttcttcatgggacatgaa 580 || |||| ||| |||||| Sbjct: 238 tttttcaagggtcatgaa 255
>gb|BT015319.1| Arabidopsis thaliana At4g25870 mRNA, complete cds Length = 1503 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Plus Query: 503 aaaattgctttcatgttcttgacacccagttcattgccttttgagaagctttgggaaaaa 562 ||||| |||||| |||||||||| ||| || | ||||| ||||||||||| ||||| || Sbjct: 506 aaaatcgctttcttgttcttgactcccggtactttgccatttgagaagctctgggatgaa 565 Query: 563 ttcttcatgggacatgaa 580 || |||| ||| |||||| Sbjct: 566 tttttcaagggtcatgaa 583
>emb|BX828354.1|CNS0A3UY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH7ZB10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1544 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Plus Query: 503 aaaattgctttcatgttcttgacacccagttcattgccttttgagaagctttgggaaaaa 562 ||||| |||||| |||||||||| ||| || | ||||| ||||||||||| ||||| || Sbjct: 520 aaaatcgctttcttgttcttgactcccggtactttgccatttgagaagctctgggatgaa 579 Query: 563 ttcttcatgggacatgaa 580 || |||| ||| |||||| Sbjct: 580 tttttcaagggtcatgaa 597
>gb|BT020605.1| Arabidopsis thaliana At4g25870 gene, complete cds Length = 1170 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Plus Query: 503 aaaattgctttcatgttcttgacacccagttcattgccttttgagaagctttgggaaaaa 562 ||||| |||||| |||||||||| ||| || | ||||| ||||||||||| ||||| || Sbjct: 295 aaaatcgctttcttgttcttgactcccggtactttgccatttgagaagctctgggatgaa 354 Query: 563 ttcttcatgggacatgaa 580 || |||| ||| |||||| Sbjct: 355 tttttcaagggtcatgaa 372
>emb|CR628334.9| Zebrafish DNA sequence from clone CH211-175F11 in linkage group 17, complete sequence Length = 147890 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 164 ggaatgctgttttagcatgattat 187 |||||||||||||||||||||||| Sbjct: 30455 ggaatgctgttttagcatgattat 30478
>emb|AL161564.2|ATCHRIV64 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 64 Length = 196286 Score = 48.1 bits (24), Expect = 0.032 Identities = 48/56 (85%) Strand = Plus / Minus Query: 503 aaaattgctttcatgttcttgacacccagttcattgccttttgagaagctttggga 558 ||||| |||||| |||||||||| ||| || | ||||| ||||||||||| ||||| Sbjct: 39905 aaaatcgctttcttgttcttgactcccggtactttgccatttgagaagctctggga 39850
>emb|AL049480.1|ATF14M19 Arabidopsis thaliana DNA chromosome 4, BAC clone F14M19 (ESSA project) Length = 91228 Score = 48.1 bits (24), Expect = 0.032 Identities = 48/56 (85%) Strand = Plus / Minus Query: 503 aaaattgctttcatgttcttgacacccagttcattgccttttgagaagctttggga 558 ||||| |||||| |||||||||| ||| || | ||||| ||||||||||| ||||| Sbjct: 48826 aaaatcgctttcttgttcttgactcccggtactttgccatttgagaagctctggga 48771
>emb|BX005010.24| Zebrafish DNA sequence from clone DKEY-8F16 in linkage group 17, complete sequence Length = 236557 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Minus Query: 164 ggaatgctgttttagcatgattat 187 |||||||||||||||||||||||| Sbjct: 115519 ggaatgctgttttagcatgattat 115496
>emb|BX827389.1|CNS0A2GY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS4ZB06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1972 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 534 cattgccttttgagaagctttgggaaaaattcttcatgggacatgaa 580 ||||||||||||||| ||||||||| | ||| ||| |||| |||||| Sbjct: 849 cattgccttttgagaggctttgggacagatttttcctgggccatgaa 895
>ref|NM_203221.1| Arabidopsis thaliana unknown protein AT5G57270 transcript variant AT5G57270.3 mRNA, complete cds Length = 1704 Score = 44.1 bits (22), Expect = 0.50 Identities = 49/58 (84%) Strand = Plus / Plus Query: 501 cgaaaattgctttcatgttcttgacacccagttcattgccttttgagaagctttggga 558 ||||||| ||||| ||||| ||||| || || | ||||| ||||||||||||||||| Sbjct: 457 cgaaaatcgcttttatgtttttgactcctggtactttgccatttgagaagctttggga 514
>ref|NM_125109.4| Arabidopsis thaliana unknown protein AT5G57270 transcript variant AT5G57270.1 mRNA, complete cds Length = 1907 Score = 44.1 bits (22), Expect = 0.50 Identities = 49/58 (84%) Strand = Plus / Plus Query: 501 cgaaaattgctttcatgttcttgacacccagttcattgccttttgagaagctttggga 558 ||||||| ||||| ||||| ||||| || || | ||||| ||||||||||||||||| Sbjct: 660 cgaaaatcgcttttatgtttttgactcctggtactttgccatttgagaagctttggga 717
>ref|NM_203220.1| Arabidopsis thaliana unknown protein AT5G57270 transcript variant AT5G57270.2 mRNA, complete cds Length = 1922 Score = 44.1 bits (22), Expect = 0.50 Identities = 49/58 (84%) Strand = Plus / Plus Query: 501 cgaaaattgctttcatgttcttgacacccagttcattgccttttgagaagctttggga 558 ||||||| ||||| ||||| ||||| || || | ||||| ||||||||||||||||| Sbjct: 675 cgaaaatcgcttttatgtttttgactcctggtactttgccatttgagaagctttggga 732
>gb|AC124828.14| Mus musculus chromosome 5, clone RP24-126A19, complete sequence Length = 188504 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 538 gccttttgagaagctttgggaa 559 |||||||||||||||||||||| Sbjct: 71918 gccttttgagaagctttgggaa 71897
>gb|BT008483.1| Arabidopsis thaliana At5g57270 gene, complete cds Length = 1167 Score = 44.1 bits (22), Expect = 0.50 Identities = 49/58 (84%) Strand = Plus / Plus Query: 501 cgaaaattgctttcatgttcttgacacccagttcattgccttttgagaagctttggga 558 ||||||| ||||| ||||| ||||| || || | ||||| ||||||||||||||||| Sbjct: 290 cgaaaatcgcttttatgtttttgactcctggtactttgccatttgagaagctttggga 347
>gb|AY093355.1| Arabidopsis thaliana unknown protein (At5g57270) mRNA, complete cds Length = 1379 Score = 44.1 bits (22), Expect = 0.50 Identities = 49/58 (84%) Strand = Plus / Plus Query: 501 cgaaaattgctttcatgttcttgacacccagttcattgccttttgagaagctttggga 558 ||||||| ||||| ||||| ||||| || || | ||||| ||||||||||||||||| Sbjct: 290 cgaaaatcgcttttatgtttttgactcctggtactttgccatttgagaagctttggga 347
>gb|AY062652.1| Arabidopsis thaliana Unknown protein (At5g57270; MJB24.8) mRNA, complete cds Length = 1611 Score = 44.1 bits (22), Expect = 0.50 Identities = 49/58 (84%) Strand = Plus / Plus Query: 501 cgaaaattgctttcatgttcttgacacccagttcattgccttttgagaagctttggga 558 ||||||| ||||| ||||| ||||| || || | ||||| ||||||||||||||||| Sbjct: 427 cgaaaatcgcttttatgtttttgactcctggtactttgccatttgagaagctttggga 484
>gb|AY062584.1| Arabidopsis thaliana Unknown protein (At5g57270; MJB24.8) mRNA, complete cds Length = 1765 Score = 44.1 bits (22), Expect = 0.50 Identities = 49/58 (84%) Strand = Plus / Plus Query: 501 cgaaaattgctttcatgttcttgacacccagttcattgccttttgagaagctttggga 558 ||||||| ||||| ||||| ||||| || || | ||||| ||||||||||||||||| Sbjct: 519 cgaaaatcgcttttatgtttttgactcctggtactttgccatttgagaagctttggga 576
>emb|BX831515.1|CNS0A1L0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH12ZA05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1646 Score = 44.1 bits (22), Expect = 0.50 Identities = 49/58 (84%) Strand = Plus / Plus Query: 501 cgaaaattgctttcatgttcttgacacccagttcattgccttttgagaagctttggga 558 ||||||| ||||| ||||| ||||| || || | ||||| ||||||||||||||||| Sbjct: 457 cgaaaatcgcttttatgtttttgactcctggtactttgccatttgagaagctttggga 514
>emb|BX830092.1|CNS0A1CQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB59ZD08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1871 Score = 44.1 bits (22), Expect = 0.50 Identities = 49/58 (84%) Strand = Plus / Plus Query: 501 cgaaaattgctttcatgttcttgacacccagttcattgccttttgagaagctttggga 558 ||||||| ||||| ||||| ||||| || || | ||||| ||||||||||||||||| Sbjct: 662 cgaaaatcgcttttatgtttttgactcctggtactttgccatttgagaagctttggga 719
>emb|BX829963.1|CNS0A1BQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB4ZD05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1945 Score = 44.1 bits (22), Expect = 0.50 Identities = 49/58 (84%) Strand = Plus / Plus Query: 501 cgaaaattgctttcatgttcttgacacccagttcattgccttttgagaagctttggga 558 ||||||| ||||| ||||| ||||| || || | ||||| ||||||||||||||||| Sbjct: 481 cgaaaatcgcttttatgtttttgactcctggtactttgccatttgagaagctttggga 538
>emb|BX829686.1|CNS0A1E4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB2ZC10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1842 Score = 44.1 bits (22), Expect = 0.50 Identities = 49/58 (84%) Strand = Plus / Plus Query: 501 cgaaaattgctttcatgttcttgacacccagttcattgccttttgagaagctttggga 558 ||||||| ||||| ||||| ||||| || || | ||||| ||||||||||||||||| Sbjct: 676 cgaaaatcgcttttatgtttttgactcctggtactttgccatttgagaagctttggga 733
>emb|BX831809.1|CNS0A16J Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH30ZG04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1561 Score = 44.1 bits (22), Expect = 0.50 Identities = 49/58 (84%) Strand = Plus / Plus Query: 501 cgaaaattgctttcatgttcttgacacccagttcattgccttttgagaagctttggga 558 ||||||| ||||| ||||| ||||| || || | ||||| ||||||||||||||||| Sbjct: 544 cgaaaatcgcttttatgtttttgactcctggtactttgccatttgagaagctttggga 601
>emb|BX831721.1|CNS0A0Y1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH25ZH02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1417 Score = 44.1 bits (22), Expect = 0.50 Identities = 49/58 (84%) Strand = Plus / Plus Query: 501 cgaaaattgctttcatgttcttgacacccagttcattgccttttgagaagctttggga 558 ||||||| ||||| ||||| ||||| || || | ||||| ||||||||||||||||| Sbjct: 400 cgaaaatcgcttttatgtttttgactcctggtactttgccatttgagaagctttggga 457
>emb|BX831429.1|CNS0A0N2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS8ZC08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1628 Score = 44.1 bits (22), Expect = 0.50 Identities = 49/58 (84%) Strand = Plus / Plus Query: 501 cgaaaattgctttcatgttcttgacacccagttcattgccttttgagaagctttggga 558 ||||||| ||||| ||||| ||||| || || | ||||| ||||||||||||||||| Sbjct: 591 cgaaaatcgcttttatgtttttgactcctggtactttgccatttgagaagctttggga 648
>emb|BX831943.1|CNS09YYC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH40ZF09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1637 Score = 44.1 bits (22), Expect = 0.50 Identities = 49/58 (84%) Strand = Plus / Plus Query: 501 cgaaaattgctttcatgttcttgacacccagttcattgccttttgagaagctttggga 558 ||||||| ||||| ||||| ||||| || || | ||||| ||||||||||||||||| Sbjct: 422 cgaaaatcgcttttatgtttttgactcctggtactttgccatttgagaagctttggga 479
>gb|AC090181.9| Homo sapiens chromosome 15, clone RP11-797A18, complete sequence Length = 157793 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 555 gggaaaaattcttcatgggacatgaa 580 ||||||||||||||||||||| |||| Sbjct: 58452 gggaaaaattcttcatgggacttgaa 58427
>dbj|AB019233.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MJB24 Length = 58589 Score = 44.1 bits (22), Expect = 0.50 Identities = 49/58 (84%) Strand = Plus / Minus Query: 501 cgaaaattgctttcatgttcttgacacccagttcattgccttttgagaagctttggga 558 ||||||| ||||| ||||| ||||| || || | ||||| ||||||||||||||||| Sbjct: 26854 cgaaaatcgcttttatgtttttgactcctggtactttgccatttgagaagctttggga 26797
>gb|AC026470.6| Homo sapiens chromosome 16 clone RP11-44I10, complete sequence Length = 169566 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 391 tggttctcagcctcctccagt 411 ||||||||||||||||||||| Sbjct: 56547 tggttctcagcctcctccagt 56567
>gb|AC146480.2| Danio rerio clone CH211-40O9, complete sequence Length = 166906 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 508 tgctttcatgttcttgacacc 528 ||||||||||||||||||||| Sbjct: 142494 tgctttcatgttcttgacacc 142514
>emb|Z54345.1|OCILIPBP O.cuniculus gene for ileal lipid-binding protein Length = 9296 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 390 gtggttctcagcctcctccag 410 ||||||||||||||||||||| Sbjct: 7199 gtggttctcagcctcctccag 7219
>gb|AC023813.6| Homo sapiens chromosome 16 clone CTC-527H23, complete sequence Length = 127725 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 391 tggttctcagcctcctccagt 411 ||||||||||||||||||||| Sbjct: 109362 tggttctcagcctcctccagt 109382
>dbj|AK124782.1| Homo sapiens cDNA FLJ42792 fis, clone BRAWH3007592 Length = 3790 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 391 tggttctcagcctcctccagt 411 ||||||||||||||||||||| Sbjct: 1702 tggttctcagcctcctccagt 1722
>dbj|AK094234.1| Homo sapiens cDNA FLJ36915 fis, clone BRACE2003904 Length = 2130 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 391 tggttctcagcctcctccagt 411 ||||||||||||||||||||| Sbjct: 42 tggttctcagcctcctccagt 62
>dbj|AK056383.1| Homo sapiens cDNA FLJ31821 fis, clone NT2RP6000039 Length = 3127 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 391 tggttctcagcctcctccagt 411 ||||||||||||||||||||| Sbjct: 1039 tggttctcagcctcctccagt 1059
>gb|AC007017.4| Arabidopsis thaliana chromosome 2 clone F11F19 map g6825, complete sequence Length = 120938 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 138 gttttcatagtttcaacaatt 158 ||||||||||||||||||||| Sbjct: 61591 gttttcatagtttcaacaatt 61571
>ref|NM_153029.3| Homo sapiens Nedd4 binding protein 1 (N4BP1), mRNA Length = 7121 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 391 tggttctcagcctcctccagt 411 ||||||||||||||||||||| Sbjct: 5016 tggttctcagcctcctccagt 5036
>emb|AL929558.13| Zebrafish DNA sequence from clone CH211-159N7, complete sequence Length = 170597 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 508 tgctttcatgttcttgacacc 528 ||||||||||||||||||||| Sbjct: 142449 tgctttcatgttcttgacacc 142469
>gb|AC111011.6| Mus musculus BAC clone RP23-424D18 from 1, complete sequence Length = 201846 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 279 ctagaaggcctctctgggtcatcatcttg 307 |||| |||||| ||||||||||||||||| Sbjct: 96537 ctagcaggcctttctgggtcatcatcttg 96509
>emb|AL935318.6| Zebrafish DNA sequence from clone CH211-251L7 in linkage group 18, complete sequence Length = 176719 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 508 tgctttcatgttcttgacacc 528 ||||||||||||||||||||| Sbjct: 139626 tgctttcatgttcttgacacc 139646
>dbj|AP004937.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT08M07, TM0096a, complete sequence Length = 24390 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 496 gaatccgaaaattgctttcat 516 ||||||||||||||||||||| Sbjct: 23681 gaatccgaaaattgctttcat 23701
>ref|NM_179654.1| Arabidopsis thaliana unknown protein AT2G19160 mRNA, complete cds Length = 2615 Score = 40.1 bits (20), Expect = 7.9 Identities = 47/56 (83%) Strand = Plus / Plus Query: 503 aaaattgctttcatgttcttgacacccagttcattgccttttgagaagctttggga 558 |||||||| || |||||||| || || || ||||||||||||| ||||| ||||| Sbjct: 782 aaaattgcatttatgttcttaactcctggtacattgccttttgaaaagctatggga 837
>gb|AY971874.1| Lycopersicon esculentum dehydroascorbate reductase (DHAR2) mRNA, complete cds Length = 1024 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 ctcctccagtgcctgtgaga 421 |||||||||||||||||||| Sbjct: 422 ctcctccagtgcctgtgaga 403
>ref|NM_017247.1| Rattus norvegicus sodium channel, voltage-gated, type 10, alpha polypeptide (Scn10a), mRNA Length = 6524 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 525 cacccagttcattgcctttt 544 |||||||||||||||||||| Sbjct: 5474 cacccagttcattgcctttt 5493
>gb|BT015873.1| Arabidopsis thaliana At2g19160 mRNA, complete cds Length = 1185 Score = 40.1 bits (20), Expect = 7.9 Identities = 47/56 (83%) Strand = Plus / Plus Query: 503 aaaattgctttcatgttcttgacacccagttcattgccttttgagaagctttggga 558 |||||||| || |||||||| || || || ||||||||||||| ||||| ||||| Sbjct: 316 aaaattgcatttatgttcttaactcctggtacattgccttttgaaaagctatggga 371
>gb|AC150555.1| Drosophila melanogaster clone BACR26G12, complete sequence Length = 164461 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 catcttgattgcttttgtat 320 |||||||||||||||||||| Sbjct: 151945 catcttgattgcttttgtat 151926
>ref|NM_009134.1| Mus musculus sodium channel, voltage-gated, type X, alpha (Scn10a), mRNA Length = 6373 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 525 cacccagttcattgcctttt 544 |||||||||||||||||||| Sbjct: 5303 cacccagttcattgcctttt 5322
>gb|AC183673.2| Pan troglodytes BAC clone CH251-540O10 from chromosome 1, complete sequence Length = 185717 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 203 ttgtaaatgtagattctgaagctc 226 |||||||| ||||||||||||||| Sbjct: 185028 ttgtaaatttagattctgaagctc 185005
>gb|AY261366.1| African swine fever virus isolate Warthog, complete genome Length = 186528 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 ttataaaccccagcattaca 365 |||||||||||||||||||| Sbjct: 114034 ttataaaccccagcattaca 114015
>gb|AY261365.1| African swine fever virus isolate Warmbaths, complete genome Length = 190773 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 ttataaaccccagcattaca 365 |||||||||||||||||||| Sbjct: 117332 ttataaaccccagcattaca 117313
>gb|AY261364.1| African swine fever virus isolate Tengani 62, complete genome Length = 185689 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 ttataaaccccagcattaca 365 |||||||||||||||||||| Sbjct: 112668 ttataaaccccagcattaca 112649
>gb|AY261360.1| African swine fever virus isolate Kenya 1950, complete genome Length = 193886 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 ttataaaccccagcattaca 365 |||||||||||||||||||| Sbjct: 121396 ttataaaccccagcattaca 121377
>gb|AY538273.1| Mus musculus tetrodotoxin resistant sodium channel Nav1.8 (Scn10a) mRNA, complete cds Length = 5874 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 525 cacccagttcattgcctttt 544 |||||||||||||||||||| Sbjct: 5265 cacccagttcattgcctttt 5284
>emb|CR694502.2|CNS0FYTU Tetraodon nigroviridis full-length cDNA Length = 1545 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 ccgaggcctcccccctcccc 81 |||||||||||||||||||| Sbjct: 1088 ccgaggcctcccccctcccc 1107
>emb|Z97356.1|HSU25E4 Human DNA sequence from clone LL0XNC01-25E4 on chromosome Xq22, complete sequence Length = 21848 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 tgtcattgctacacatacac 246 |||||||||||||||||||| Sbjct: 15870 tgtcattgctacacatacac 15889
>emb|Z84468.1|HS299D3 Human DNA sequence from clone CTA-299D3 on chromosome 22q13.3, complete sequence Length = 90736 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 286 gcctctctgggtcatcatct 305 |||||||||||||||||||| Sbjct: 16163 gcctctctgggtcatcatct 16144
>emb|AL591163.22| Human DNA sequence from clone RP11-242F24 on chromosome 1 Contains a novel gene and a CpG island, complete sequence Length = 71819 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 cccacctttctcccccgtcg 47 |||||||||||||||||||| Sbjct: 23747 cccacctttctcccccgtcg 23766
>emb|AL596268.5| Human DNA sequence from clone RP11-504E21 on chromosome X Contains a MAGE family pseudogene, complete sequence Length = 113335 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 taaatgtagattctgaagct 225 |||||||||||||||||||| Sbjct: 75290 taaatgtagattctgaagct 75271
>emb|AL137789.11| Human DNA sequence from clone RP11-57I17 on chromosome 1q32.1-32.3 Contains the 3' end of the CR1 gene for complement component (3b/4b) receptor 1, including Knops blood group system, a membrane cofactor protein (CD46, trophoblast-lymphocyte cross-reactive antigen) (MCP) pseudogene and the 5' end of the CR1L gene for complement component (3b/4b) receptor 1-like, complete sequence Length = 145325 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 203 ttgtaaatgtagattctgaagctc 226 |||||||| ||||||||||||||| Sbjct: 113135 ttgtaaatttagattctgaagctc 113112
>emb|AL031731.44|HS330O12 Human DNA sequence from clone RP3-330O12 on chromosome 1p36.11-36.23 Contains the FBXO2 gene for F-box only protein 2, the gene for F-box protein FBX30, the FBXO6 gene for F-box only protein 6, the MAD2L2 gene for MAD2 mitotic arrest deficient-like 2 (yeast), the 5' end of a novel gene and three CpG islands, complete sequence Length = 90136 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 cctccagtgcctgtgagagt 423 |||||||||||||||||||| Sbjct: 50392 cctccagtgcctgtgagagt 50411
>emb|Y09108.1|MMSNS M.musculus mRNA for SNS-TTXi sodium channel Length = 6373 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 525 cacccagttcattgcctttt 544 |||||||||||||||||||| Sbjct: 5303 cacccagttcattgcctttt 5322
>emb|X92184.1|RNSNS R.norvegicus mRNA for voltage-gated sodium channel (SNS) Length = 6524 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 525 cacccagttcattgcctttt 544 |||||||||||||||||||| Sbjct: 5474 cacccagttcattgcctttt 5493
>gb|AC002392.3| Arabidopsis thaliana chromosome 2 clone T20K24 map CIC06E08, complete sequence Length = 105528 Score = 40.1 bits (20), Expect = 7.9 Identities = 47/56 (83%) Strand = Plus / Plus Query: 503 aaaattgctttcatgttcttgacacccagttcattgccttttgagaagctttggga 558 |||||||| || |||||||| || || || ||||||||||||| ||||| ||||| Sbjct: 71504 aaaattgcatttatgttcttaactcctggtacattgccttttgaaaagctatggga 71559
>dbj|AK157866.1| Mus musculus adult inner ear cDNA, RIKEN full-length enriched library, clone:F930001N03 product:sodium channel, voltage-gated, type X, alpha polypeptide, full insert sequence Length = 5933 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 525 cacccagttcattgcctttt 544 |||||||||||||||||||| Sbjct: 5334 cacccagttcattgcctttt 5353
>gb|AY062829.1| Arabidopsis thaliana Unknown protein (At2g19160; T20K24.18) mRNA, complete cds Length = 2041 Score = 40.1 bits (20), Expect = 7.9 Identities = 47/56 (83%) Strand = Plus / Plus Query: 503 aaaattgctttcatgttcttgacacccagttcattgccttttgagaagctttggga 558 |||||||| || |||||||| || || || ||||||||||||| ||||| ||||| Sbjct: 782 aaaattgcatttatgttcttaactcctggtacattgccttttgaaaagctatggga 837
>gb|AC007299.18|AC007299 Drosophila melanogaster, chromosome 2L, region 30B-, BAC clone BACR07D23, complete sequence Length = 176610 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 catcttgattgcttttgtat 320 |||||||||||||||||||| Sbjct: 24672 catcttgattgcttttgtat 24691
>gb|DQ017900.1| Homo sapiens MAD2 mitotic arrest deficient-like 2 (yeast) (MAD2L2) gene, complete cds Length = 10517 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 404 cctccagtgcctgtgagagt 423 |||||||||||||||||||| Sbjct: 6882 cctccagtgcctgtgagagt 6863
>gb|AY261363.1| African swine fever virus isolate Pretorisuskop/96/4, complete genome Length = 190324 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 ttataaaccccagcattaca 365 |||||||||||||||||||| Sbjct: 118289 ttataaaccccagcattaca 118270
>gb|AY261362.1| African swine fever virus isolate Mkuzi 1979, complete genome Length = 192714 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 ttataaaccccagcattaca 365 |||||||||||||||||||| Sbjct: 119188 ttataaaccccagcattaca 119169
>gb|AY261361.1| African swine fever virus isolate Malawi Lil-20/1 (1983), complete genome Length = 187612 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 ttataaaccccagcattaca 365 |||||||||||||||||||| Sbjct: 115835 ttataaaccccagcattaca 115816
>emb|Z22777.1|ASCP2475L African swine fever virus CP2475L gene Length = 8148 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 ttataaaccccagcattaca 365 |||||||||||||||||||| Sbjct: 713 ttataaaccccagcattaca 694
>gb|AE003624.3| Drosophila melanogaster chromosome 2L, section 33 of 83 of the complete sequence Length = 270771 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 catcttgattgcttttgtat 320 |||||||||||||||||||| Sbjct: 235578 catcttgattgcttttgtat 235597
>emb|BX470214.6| Zebrafish DNA sequence from clone DKEY-27M7 in linkage group 18, complete sequence Length = 234545 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 297 tcatcatcttgattgcttttgtat 320 ||||||| |||||||||||||||| Sbjct: 192706 tcatcatattgattgcttttgtat 192729
>gb|U53833.1|RNU53833 Rattus norvegicus sodium channel PN3 gene, complete cds Length = 6344 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 525 cacccagttcattgcctttt 544 |||||||||||||||||||| Sbjct: 5290 cacccagttcattgcctttt 5309
>gb|U50453.1|TAU50453 Thermus aquaticus Hexb/MutL homolog (mutL) gene, complete cds Length = 2478 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 ctcccgaggcctcccccctc 78 |||||||||||||||||||| Sbjct: 1340 ctcccgaggcctcccccctc 1359
>gb|AC171201.1| Mus musculus BAC clone RP24-303H7 from chromosome 9, complete sequence Length = 170322 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 525 cacccagttcattgcctttt 544 |||||||||||||||||||| Sbjct: 122174 cacccagttcattgcctttt 122193
>gb|L42342.1|MUSSOCHB Mus musculus (clone NaCh bc 1.6 in pBS+) sodium channel mRNA, complete cds Length = 1618 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 525 cacccagttcattgcctttt 544 |||||||||||||||||||| Sbjct: 1009 cacccagttcattgcctttt 1028
>gb|U18466.1|ASU18466 African swine fever virus, complete genome Length = 170101 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 ttataaaccccagcattaca 365 |||||||||||||||||||| Sbjct: 100574 ttataaaccccagcattaca 100555
>emb|AL808024.4| Mouse DNA sequence from clone RP23-144L10 on chromosome X, complete sequence Length = 186528 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 385 ttcctgtggttctcagcctc 404 |||||||||||||||||||| Sbjct: 36392 ttcctgtggttctcagcctc 36373 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,643,678 Number of Sequences: 3902068 Number of extensions: 5643678 Number of successful extensions: 126601 Number of sequences better than 10.0: 94 Number of HSP's better than 10.0 without gapping: 92 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 126397 Number of HSP's gapped (non-prelim): 203 length of query: 580 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 557 effective length of database: 17,143,297,704 effective search space: 9548816821128 effective search space used: 9548816821128 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)