ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal36d18 |
|---|---|
| Clone Library Name | barley_pub |
>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,| chloroplast precursor (RuBisCO activase A) (RA A) Length = 464 Score = 454 bits (1167), Expect = e-127 Identities = 223/224 (99%), Positives = 223/224 (99%) Frame = +1 Query: 1 GAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDIS 180 GAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDIS Sbjct: 10 GAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDIS 69 Query: 181 DDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMD 360 DDQQDITRGKGIVDSLFQAPTG GTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMD Sbjct: 70 DDQQDITRGKGIVDSLFQAPTGHGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMD 129 Query: 361 KLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNA 540 KLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNA Sbjct: 130 KLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNA 189 Query: 541 GEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQY 672 GEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQY Sbjct: 190 GEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQY 233
>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 432 Score = 413 bits (1062), Expect = e-115 Identities = 206/226 (91%), Positives = 214/226 (94%), Gaps = 2/226 (0%) Frame = +1 Query: 1 GAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTD--KWKGLAYD 174 GAPASTPTNFLGKKLKKQVTSAVNYHGKSS NRF VMA E +DE + TD +WKGLAYD Sbjct: 10 GAPASTPTNFLGKKLKKQVTSAVNYHGKSSNINRFKVMAKE-LDEGKQTDQDRWKGLAYD 68 Query: 175 ISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAF 354 ISDDQQDITRGKG VDSLFQAPTGDGTHEAVLSSYEY+SQGLR YDFDNTMGGFYIAP+F Sbjct: 69 ISDDQQDITRGKGFVDSLFQAPTGDGTHEAVLSSYEYLSQGLRTYDFDNTMGGFYIAPSF 128 Query: 355 MDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESG 534 MDKLVVH+SKNFMTLPNIK+PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESG Sbjct: 129 MDKLVVHISKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESG 188 Query: 535 NAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQY 672 N GEPAKLIRQRYREAAD+IKKGKMCCLFINDLDAGAGRMGGTTQY Sbjct: 189 N-GEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRMGGTTQY 233
>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 433 Score = 376 bits (965), Expect = e-104 Identities = 189/230 (82%), Positives = 206/230 (89%), Gaps = 6/230 (2%) Frame = +1 Query: 1 GAPASTPT--NFLGKKLKK-QVTSAVNYHGKSSKAN-RFTVMAAENIDEKRNTD--KWKG 162 GAPASTPT +FLGKKL K QV++AV YHGKSS +N RF MAA+ +DE + TD +WKG Sbjct: 10 GAPASTPTRSSFLGKKLNKPQVSAAVTYHGKSSSSNSRFKAMAAKEVDETKQTDEDRWKG 69 Query: 163 LAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYI 342 LAYDISDDQQDITRGKG+VD+LFQAP GDGTH AVLSSY+Y+SQG + Y+FDN M GFYI Sbjct: 70 LAYDISDDQQDITRGKGLVDNLFQAPMGDGTHVAVLSSYDYISQGQKSYNFDNMMDGFYI 129 Query: 343 APAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGE 522 A FMDKLVVHLSKNFMTLPNIK+PLILGIWGGKGQGKSFQCELVFAKMGI PIMMSAGE Sbjct: 130 AKGFMDKLVVHLSKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGITPIMMSAGE 189 Query: 523 LESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQY 672 LESGNAGEPAKLIRQRYREA+D+IKKGKM CLFINDLDAGAGRMGGTTQY Sbjct: 190 LESGNAGEPAKLIRQRYREASDLIKKGKMSCLFINDLDAGAGRMGGTTQY 239
>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,| chloroplast precursor (RuBisCO activase B) (RA B) Length = 425 Score = 367 bits (943), Expect = e-101 Identities = 187/228 (82%), Positives = 201/228 (88%), Gaps = 4/228 (1%) Frame = +1 Query: 1 GAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFT-VMAAEN-IDEKRNTD--KWKGLA 168 GAPASTPT FLGKK+K YHG + +R VMAA+ +D+ + TD +WKGLA Sbjct: 10 GAPASTPTIFLGKKVKNY------YHGGNKMKSRVVRVMAAKKELDQGKQTDADRWKGLA 63 Query: 169 YDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAP 348 YDISDDQQDITRGKGIVDSLFQAP GDGTHEA+LSSYEY+SQGLRKYDFDNTM G YIAP Sbjct: 64 YDISDDQQDITRGKGIVDSLFQAPMGDGTHEAILSSYEYISQGLRKYDFDNTMDGLYIAP 123 Query: 349 AFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELE 528 AFMDKL+VHL+KNFMTLPNIK+PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELE Sbjct: 124 AFMDKLIVHLAKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELE 183 Query: 529 SGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQY 672 SGN GEPAKLIRQRYREAAD+I KGKMCCLFINDLDAGAGRMGGTTQY Sbjct: 184 SGN-GEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQY 230
>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 474 Score = 342 bits (877), Expect = 6e-94 Identities = 171/223 (76%), Positives = 190/223 (85%) Frame = +1 Query: 4 APASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDISD 183 APAST FLGKK V + + + K+N + A D++ + D+W+GLAYD SD Sbjct: 28 APAST---FLGKK----VVTVSRFAQSNKKSNGSFKVLAVKEDKQTDGDRWRGLAYDTSD 80 Query: 184 DQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDK 363 DQQDITRGKG+VDS+FQAP G GTH AVLSSYEYVSQGLR+Y+ DN M GFYIAPAFMDK Sbjct: 81 DQQDITRGKGMVDSVFQAPMGTGTHHAVLSSYEYVSQGLRQYNLDNMMDGFYIAPAFMDK 140 Query: 364 LVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAG 543 LVVH++KNF+TLPNIK+PLILGIWGGKGQGKSFQCELV AKMGINPIMMSAGELESGNAG Sbjct: 141 LVVHITKNFLTLPNIKVPLILGIWGGKGQGKSFQCELVMAKMGINPIMMSAGELESGNAG 200 Query: 544 EPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQY 672 EPAKLIRQRYREAAD+IKKGKMCCLFINDLDAGAGRMGGTTQY Sbjct: 201 EPAKLIRQRYREAADLIKKGKMCCLFINDLDAGAGRMGGTTQY 243
>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,| chloroplast precursor (RuBisCO activase 1) (RA 1) (RubisCO activase alpha form) Length = 476 Score = 340 bits (871), Expect = 3e-93 Identities = 174/227 (76%), Positives = 193/227 (85%), Gaps = 3/227 (1%) Frame = +1 Query: 1 GAPAST--PTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAE-NIDEKRNTDKWKGLAY 171 GA AS T F G LKK SA + SS F ++A E + D++ + DKWKGLAY Sbjct: 22 GARASLVPSTAFFGSSLKK---SAAKFPKASS--GNFKIVAQEISEDQQTDKDKWKGLAY 76 Query: 172 DISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPA 351 DISDDQQDITRGKG+VD+LFQAP GTH AV+SSY+Y+SQGLR+Y+ DN M GFYIAPA Sbjct: 77 DISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGLRQYNLDNNMDGFYIAPA 136 Query: 352 FMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELES 531 FMDKLVVH++KNF++LPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELES Sbjct: 137 FMDKLVVHITKNFLSLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELES 196 Query: 532 GNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQY 672 GNAGEPAKLIRQRYREAAD+IKKGKMCCLFINDLDAGAGRMGGTTQY Sbjct: 197 GNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRMGGTTQY 243
>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,| chloroplast precursor (RuBisCO activase 2) (RA 2) (RubisCO activase beta form) Length = 435 Score = 340 bits (871), Expect = 3e-93 Identities = 174/227 (76%), Positives = 193/227 (85%), Gaps = 3/227 (1%) Frame = +1 Query: 1 GAPAST--PTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAE-NIDEKRNTDKWKGLAY 171 GA AS T F G LKK SA + SS F ++A E + D++ + DKWKGLAY Sbjct: 22 GARASLVPSTAFFGSSLKK---SAAKFPKASS--GNFKIVAQEISEDQQTDKDKWKGLAY 76 Query: 172 DISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPA 351 DISDDQQDITRGKG+VD+LFQAP GTH AV+SSY+Y+SQGLR+Y+ DN M GFYIAPA Sbjct: 77 DISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGLRQYNLDNNMDGFYIAPA 136 Query: 352 FMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELES 531 FMDKLVVH++KNF++LPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELES Sbjct: 137 FMDKLVVHITKNFLSLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELES 196 Query: 532 GNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQY 672 GNAGEPAKLIRQRYREAAD+IKKGKMCCLFINDLDAGAGRMGGTTQY Sbjct: 197 GNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRMGGTTQY 243
>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 437 Score = 332 bits (851), Expect = 6e-91 Identities = 166/224 (74%), Positives = 190/224 (84%), Gaps = 3/224 (1%) Frame = +1 Query: 10 ASTPTN-FLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDK--WKGLAYDIS 180 AS P++ FLG LKK VN +SK + ++ ++DE + TDK WKGLA+D S Sbjct: 25 ASVPSSTFLGSSLKK-----VNSRFTNSKVSSGSLRIVASVDEDKQTDKDRWKGLAFDTS 79 Query: 181 DDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMD 360 DDQQDITRGKG VDSLFQAP G GTH A++SSYEY+S GLR+Y+FDN M G+YIAPAFMD Sbjct: 80 DDQQDITRGKGKVDSLFQAPQGSGTHFAIMSSYEYISTGLRQYNFDNNMDGYYIAPAFMD 139 Query: 361 KLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNA 540 KLVVH++KNFMTLPN+K+PLILGIWGGKGQGKSFQCELVFAKM I+PIMMSAGELESGNA Sbjct: 140 KLVVHITKNFMTLPNMKVPLILGIWGGKGQGKSFQCELVFAKMRISPIMMSAGELESGNA 199 Query: 541 GEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQY 672 GEPAKLIRQRYREAAD+I+KGKMC LFINDLDAGAGR+GGTTQY Sbjct: 200 GEPAKLIRQRYREAADIIRKGKMCALFINDLDAGAGRLGGTTQY 243
>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,| chloroplast precursor (RuBisCO activase 1) (RA 1) Length = 442 Score = 332 bits (850), Expect = 8e-91 Identities = 168/226 (74%), Positives = 187/226 (82%), Gaps = 3/226 (1%) Frame = +1 Query: 4 APASTP-TNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTD--KWKGLAYD 174 A S P T F GK LKK V+ ++K+ R V ++D K+ TD +WKGL D Sbjct: 23 AGTSVPSTAFFGKTLKKVYGKGVSSPKVTNKSLRI-VAEQIDVDPKKQTDSDRWKGLVQD 81 Query: 175 ISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAF 354 SDDQQDITRGKG+VDSLFQAPTG GTH AVL SYEYVSQGLR+Y+ DN + GFYIAPAF Sbjct: 82 FSDDQQDITRGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGLRQYNLDNKLDGFYIAPAF 141 Query: 355 MDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESG 534 MDKLVVH++KNF+ LPNIK+PLILGIWGGKGQGKSFQCELVF KMGINPIMMSAGELESG Sbjct: 142 MDKLVVHITKNFLKLPNIKVPLILGIWGGKGQGKSFQCELVFRKMGINPIMMSAGELESG 201 Query: 535 NAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQY 672 NAGEPAKLIRQRYREAA++I+KG MCCLFINDLDAGAGRMGGTTQY Sbjct: 202 NAGEPAKLIRQRYREAAEIIRKGNMCCLFINDLDAGAGRMGGTTQY 247
>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 441 Score = 330 bits (846), Expect = 2e-90 Identities = 165/227 (72%), Positives = 193/227 (85%), Gaps = 3/227 (1%) Frame = +1 Query: 1 GAPASTPTN-FLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNT--DKWKGLAY 171 G AS P++ F G LKK ++S V + K + + V A + I+E + T D+W+GLAY Sbjct: 22 GGGASGPSSAFFGTSLKKVISSRVP-NSKLTSGSFKIVAADKEIEETQQTEGDRWRGLAY 80 Query: 172 DISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPA 351 D+SDDQQDITRGKG+VDSLFQAP GTH AV+SS++Y+S GLR+Y+FDN GFYIAPA Sbjct: 81 DVSDDQQDITRGKGLVDSLFQAPMDAGTHYAVISSHKYLSAGLRQYNFDNIKDGFYIAPA 140 Query: 352 FMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELES 531 F+DKLVVH++KNFMTLPNIK+PLILG+WGGKGQGKSFQCELVFAKMGINPIMMSAGELES Sbjct: 141 FLDKLVVHIAKNFMTLPNIKVPLILGVWGGKGQGKSFQCELVFAKMGINPIMMSAGELES 200 Query: 532 GNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQY 672 GNAGEPAKLIRQRYREA+D+IKKGKMC LFINDLDAGAGR+GGTTQY Sbjct: 201 GNAGEPAKLIRQRYREASDLIKKGKMCVLFINDLDAGAGRLGGTTQY 247
>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 413 Score = 328 bits (842), Expect = 7e-90 Identities = 160/217 (73%), Positives = 182/217 (83%), Gaps = 2/217 (0%) Frame = +1 Query: 28 FLGKKLKKQVTSAVNYHGKSSK--ANRFTVMAAENIDEKRNTDKWKGLAYDISDDQQDIT 201 FLG +LK V+ +SK F ++A ++ +++ DKW+GLA+D SDDQQDIT Sbjct: 30 FLGSRLK------VSSRFTTSKMVTGNFKIVAEQDEEKQTEKDKWRGLAFDTSDDQQDIT 83 Query: 202 RGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLS 381 RGKG+ D LFQAP G GTH AVLSSYEY+S GLR Y +DN + GFYIAPAFMDKL VH+ Sbjct: 84 RGKGLADPLFQAPMGTGTHNAVLSSYEYISAGLRDYSYDNNVDGFYIAPAFMDKLTVHIV 143 Query: 382 KNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLI 561 KNF+TLPNIK+PLILG+WGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLI Sbjct: 144 KNFLTLPNIKVPLILGVWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLI 203 Query: 562 RQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQY 672 RQRYREAAD+IKKGKMCCLFINDLDAGAGR+GGTTQY Sbjct: 204 RQRYREAADIIKKGKMCCLFINDLDAGAGRLGGTTQY 240
>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,| chloroplast precursor (RuBisCO activase 2) (RA 2) Length = 439 Score = 328 bits (840), Expect = 1e-89 Identities = 167/228 (73%), Positives = 186/228 (81%), Gaps = 5/228 (2%) Frame = +1 Query: 4 APASTP-TNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAE--NIDEKRNT--DKWKGLA 168 A S P T F GK LKK V+ NR +AAE + D K+ T D+WKGL Sbjct: 23 AGTSVPSTAFFGKTLKKVYGKGVS---SPKVTNRSLRIAAEEKDADPKKQTYSDRWKGLV 79 Query: 169 YDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAP 348 D SDDQQDI RGKG+VDSLFQAPTG GTH AVL SYEYVSQGLR+Y+ DNT+ GFYIAP Sbjct: 80 QDFSDDQQDIARGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGLRQYNMDNTLDGFYIAP 139 Query: 349 AFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELE 528 +FMDKLVVH++KNF+ LPNIK+PLILG+WGGKGQGKSFQCELVF KMGINPIMMSAGELE Sbjct: 140 SFMDKLVVHITKNFLKLPNIKVPLILGVWGGKGQGKSFQCELVFRKMGINPIMMSAGELE 199 Query: 529 SGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQY 672 SGNAGEPAKLIRQRYREAA++I+KG +CCLFINDLDAGAGRMGGTTQY Sbjct: 200 SGNAGEPAKLIRQRYREAAEIIRKGNICCLFINDLDAGAGRMGGTTQY 247
>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 439 Score = 327 bits (838), Expect = 2e-89 Identities = 170/227 (74%), Positives = 188/227 (82%), Gaps = 3/227 (1%) Frame = +1 Query: 1 GAPASTPTN-FLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNT--DKWKGLAY 171 GA AS PT+ F G LKK V S V + K + + V A + I+E + T D+WKGLAY Sbjct: 22 GAGASAPTSAFFGTSLKKAVASRVP-NSKVTNGSFKIVAAEKEIEESQQTNKDRWKGLAY 80 Query: 172 DISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPA 351 DISDDQQDITRGKG+VD LFQAP GTH AV+SSYEY+S GLR+ DN GFYIAPA Sbjct: 81 DISDDQQDITRGKGMVDPLFQAPMDAGTHYAVMSSYEYLSTGLRQ--LDNIKDGFYIAPA 138 Query: 352 FMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELES 531 F+DKLVVH++KNFMTLPNIK+PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELES Sbjct: 139 FLDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELES 198 Query: 532 GNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQY 672 GNAGEPAKLIRQRYREAAD+I KGKMC LFINDLDAGAGR+GGTTQY Sbjct: 199 GNAGEPAKLIRQRYREAADLIAKGKMCALFINDLDAGAGRLGGTTQY 245
>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 459 Score = 325 bits (832), Expect = 1e-88 Identities = 161/224 (71%), Positives = 183/224 (81%), Gaps = 1/224 (0%) Frame = +1 Query: 4 APASTP-TNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDIS 180 A S P T F GK LKK V+ +NR + A+ +DE + D+WKGL + S Sbjct: 23 AGTSVPSTAFFGKSLKKVYAKGVS---SPKVSNRNLRVVAQEVDETKE-DRWKGLYDNTS 78 Query: 181 DDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMD 360 DDQQDI RGKG+VDSLFQAPTG GTH A+++SYEYVSQ L+ Y DN + GFYIAPAFMD Sbjct: 79 DDQQDIARGKGLVDSLFQAPTGTGTHHAIMNSYEYVSQALKTYQLDNKLDGFYIAPAFMD 138 Query: 361 KLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNA 540 KLVVH++KNF+TLPNIK+PLILG+WGGKGQGKSFQCELVF KMGINPIMMSAGELESGNA Sbjct: 139 KLVVHITKNFLTLPNIKVPLILGVWGGKGQGKSFQCELVFRKMGINPIMMSAGELESGNA 198 Query: 541 GEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQY 672 GEPAKLIRQRYREAA++I+KG MCCLFINDLDAGAGRMGGTTQY Sbjct: 199 GEPAKLIRQRYREAAEIIRKGNMCCLFINDLDAGAGRMGGTTQY 242
>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 472 Score = 324 bits (830), Expect = 2e-88 Identities = 166/224 (74%), Positives = 181/224 (80%), Gaps = 1/224 (0%) Frame = +1 Query: 4 APASTPTN-FLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDIS 180 A AS PT+ FLG LKK SS+ TV AAEN E++NTDKW LA D S Sbjct: 23 AGASVPTSGFLGSSLKKHTNVRFP---SSSRTTSMTVKAAEN--EEKNTDKWAHLAKDFS 77 Query: 181 DDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMD 360 DDQ DI RGKG+VDSLFQAP GTH + SS+EY SQGLRKYD DN +G FYIAPAFMD Sbjct: 78 DDQLDIRRGKGMVDSLFQAPADAGTHVPIQSSFEYESQGLRKYDIDNMLGDFYIAPAFMD 137 Query: 361 KLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNA 540 KLVVH++KNF+ LPNIKIPLILG+WGGKGQGKSFQCELVFAK+GINPIMMSAGELESGNA Sbjct: 138 KLVVHITKNFLNLPNIKIPLILGVWGGKGQGKSFQCELVFAKLGINPIMMSAGELESGNA 197 Query: 541 GEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQY 672 GEPAKLIRQRYREAAD+I KGKMC LFINDL+ GAGRMGGTTQY Sbjct: 198 GEPAKLIRQRYREAADLIAKGKMCALFINDLEPGAGRMGGTTQY 241
>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 408 Score = 248 bits (633), Expect = 1e-65 Identities = 122/182 (67%), Positives = 146/182 (80%), Gaps = 3/182 (1%) Frame = +1 Query: 136 KRNTDKWKGL--AYDISDDQQDITRGKGIVDSLFQAPTG-DGTHEAVLSSYEYVSQGLRK 306 ++ +W+ + D SDDQQDITRG+ +VD LFQ G GTH AVLSS EY+SQ + Sbjct: 37 RKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQS--R 94 Query: 307 YDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAK 486 F+N GFYI+PAF+DK+ +H++KNFM LP IK+PLILGIWGGKGQGK+FQC L + K Sbjct: 95 ASFNNIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCALAYKK 154 Query: 487 MGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTT 666 +GI PI+MSAGELESGNAGEPAKLIR RYREA+D+IKKG+MC LFINDLDAGAGRMG TT Sbjct: 155 LGIAPIVMSAGELESGNAGEPAKLIRTRYREASDIIKKGRMCSLFINDLDAGAGRMGDTT 214 Query: 667 QY 672 QY Sbjct: 215 QY 216
>RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase activase| (RuBisCO activase) (RA) Length = 415 Score = 155 bits (392), Expect = 1e-37 Identities = 73/114 (64%), Positives = 92/114 (80%), Gaps = 1/114 (0%) Frame = +1 Query: 334 FYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMS 513 +YIAP F+DKL VH++KNF+ LP +++PLILGI G KG+GK+FQCEL F KMG+ ++S Sbjct: 3 YYIAPRFLDKLAVHITKNFLNLPGVRVPLILGIHGRKGEGKTFQCELAFEKMGVEVTLIS 62 Query: 514 AGELESGNAGEPAKLIRQRYREAADMIK-KGKMCCLFINDLDAGAGRMGGTTQY 672 GELES +AG+PA+LIR RYRE A++IK +GKMC L INDLDAGAGR TQY Sbjct: 63 GGELESPDAGDPARLIRLRYRETAELIKVRGKMCVLMINDLDAGAGRFDEGTQY 116
>RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase activase| (RuBisCO activase) (RA) Length = 414 Score = 155 bits (391), Expect = 1e-37 Identities = 73/114 (64%), Positives = 92/114 (80%), Gaps = 1/114 (0%) Frame = +1 Query: 334 FYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMS 513 +YIAP F+DKL VH++KNF+ +P +++PLILGI G KG+GK+FQCEL F KMGI ++S Sbjct: 3 YYIAPRFLDKLAVHITKNFLNIPGVRVPLILGIHGRKGEGKTFQCELAFEKMGIEVTLIS 62 Query: 514 AGELESGNAGEPAKLIRQRYREAADMIK-KGKMCCLFINDLDAGAGRMGGTTQY 672 GELES +AG+PA+LIR RYRE A++IK +GKMC L INDLDAGAGR TQY Sbjct: 63 GGELESPDAGDPARLIRLRYRETAELIKVRGKMCVLMINDLDAGAGRFDEGTQY 116
>Y1297_ARCFU (O28972) Cell division cycle protein 48 homolog AF1297| Length = 733 Score = 42.0 bits (97), Expect = 0.002 Identities = 27/86 (31%), Positives = 44/86 (51%) Frame = +1 Query: 403 NIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREA 582 NIK P + ++G G GK+ + V + N I + EL S GE K +R+ +R+A Sbjct: 485 NIKPPRGILLFGPPGTGKTLLAKAVANESNANFISVKGPELLSKWVGESEKHVREMFRKA 544 Query: 583 ADMIKKGKMCCLFINDLDAGAGRMGG 660 + C +F +++D+ A R GG Sbjct: 545 RQVAP----CVIFFDEIDSLAPRRGG 566
>PRS10_SCHPO (O74445) Probable 26S protease subunit rpt4| Length = 388 Score = 42.0 bits (97), Expect = 0.002 Identities = 24/82 (29%), Positives = 45/82 (54%) Frame = +1 Query: 406 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 585 IK P + ++G G GK+ V A +G+N + + + + GE A++IR+ + A Sbjct: 163 IKPPKGVLLYGPPGTGKTLLARAVAASLGVNFLKVVSSAIVDKYIGESARIIREMFGYA- 221 Query: 586 DMIKKGKMCCLFINDLDAGAGR 651 K+ + C +F++++DA GR Sbjct: 222 ---KEHEPCVIFMDEIDAIGGR 240
>CD48B_ARATH (Q9ZPR1) Cell division control protein 48 homolog B (AtCDC48b)| Length = 603 Score = 38.1 bits (87), Expect = 0.025 Identities = 21/77 (27%), Positives = 40/77 (51%) Frame = +1 Query: 406 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 585 +K P L ++G G GK+ V + + I++S + +AGE K++R+ + EA+ Sbjct: 53 LKWPRGLLLYGPPGTGKTSLVRAVVQECDAHLIVLSPHSVHRAHAGESEKVLREAFAEAS 112 Query: 586 DMIKKGKMCCLFINDLD 636 K +FI+++D Sbjct: 113 SHAVSDKPSVIFIDEID 129
>FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 631 Score = 37.0 bits (84), Expect = 0.055 Identities = 31/116 (26%), Positives = 52/116 (44%), Gaps = 1/116 (0%) Frame = +1 Query: 319 NTMGGFYIAPAFMDKLVVHLSK-NFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGI 495 N + G A +++V L K T KIP + + G G GK+ + + + G+ Sbjct: 173 NDVAGVDEAKEEFEEVVSFLKKPERFTAVGAKIPKGVLLVGPPGTGKTLLAKAIAGEAGV 232 Query: 496 NPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGT 663 +S E G A +R +++A K+ C +FI+++DA GR GT Sbjct: 233 PFFSISGSEFVEMFVGVGASRVRDLFKKA----KENSPCIVFIDEIDA-VGRQRGT 283
>PRS10_SPETR (P62335) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) (Conserved ATPase domain protein 44) (CADp44) Length = 389 Score = 37.0 bits (84), Expect = 0.055 Identities = 20/74 (27%), Positives = 39/74 (52%) Frame = +1 Query: 430 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 609 ++G G GK+ V +++ N + + + + GE A+LIR+ + A D + Sbjct: 172 LYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARD----HQP 227 Query: 610 CCLFINDLDAGAGR 651 C +F++++DA GR Sbjct: 228 CIIFMDEIDAIGGR 241
>PRS10_MOUSE (P62334) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) Length = 389 Score = 37.0 bits (84), Expect = 0.055 Identities = 20/74 (27%), Positives = 39/74 (52%) Frame = +1 Query: 430 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 609 ++G G GK+ V +++ N + + + + GE A+LIR+ + A D + Sbjct: 172 LYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARD----HQP 227 Query: 610 CCLFINDLDAGAGR 651 C +F++++DA GR Sbjct: 228 CIIFMDEIDAIGGR 241
>PRS10_HUMAN (P62333) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) Length = 389 Score = 37.0 bits (84), Expect = 0.055 Identities = 20/74 (27%), Positives = 39/74 (52%) Frame = +1 Query: 430 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 609 ++G G GK+ V +++ N + + + + GE A+LIR+ + A D + Sbjct: 172 LYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARD----HQP 227 Query: 610 CCLFINDLDAGAGR 651 C +F++++DA GR Sbjct: 228 CIIFMDEIDAIGGR 241
>VPS4_SCHPO (Q09803) Suppressor protein of bem1/bed5 double mutants| Length = 432 Score = 37.0 bits (84), Expect = 0.055 Identities = 21/73 (28%), Positives = 40/73 (54%) Frame = +1 Query: 430 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 609 ++G G GKS+ + V + G +S+ +L S GE +L+RQ + +M ++ K Sbjct: 167 LYGPPGTGKSYLAKAVATEAGSTFFSISSSDLVSKWMGESERLVRQLF----EMAREQKP 222 Query: 610 CCLFINDLDAGAG 648 +FI+++D+ G Sbjct: 223 SIIFIDEIDSLCG 235
>VPS4_YEAST (P52917) Vacuolar protein sorting-associated protein VPS4 (END13| protein) (DOA4-independent degradation protein 6) Length = 437 Score = 36.6 bits (83), Expect = 0.071 Identities = 22/76 (28%), Positives = 39/76 (51%) Frame = +1 Query: 430 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 609 ++G G GKS+ + V + +S+ +L S GE KL++Q + M ++ K Sbjct: 171 LYGPPGTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESEKLVKQLFA----MARENKP 226 Query: 610 CCLFINDLDAGAGRMG 657 +FI+++DA G G Sbjct: 227 SIIFIDEVDALTGTRG 242
>FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 787 Score = 35.8 bits (81), Expect = 0.12 Identities = 24/85 (28%), Positives = 39/85 (45%) Frame = +1 Query: 409 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 588 KIP + ++G G GK+ V + G+ +S + G A R R+ D Sbjct: 194 KIPKGVLLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGA----SRVRDLFD 249 Query: 589 MIKKGKMCCLFINDLDAGAGRMGGT 663 K+ C +F++++DA GR GT Sbjct: 250 QAKQNSPCIIFVDEIDA-VGRQRGT 273
>KAD5_MOUSE (Q920P5) Adenylate kinase isoenzyme 5 (EC 2.7.4.3) (ATP-AMP| transphosphorylase) Length = 193 Score = 35.4 bits (80), Expect = 0.16 Identities = 28/83 (33%), Positives = 38/83 (45%), Gaps = 3/83 (3%) Frame = +1 Query: 421 ILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL---ESGNAGEPAKLIRQRYREAADM 591 I+ + GG G GK QCE + K G +S GEL E + E +KLIR E D+ Sbjct: 9 IIFLMGGPGSGKGTQCEKLAEKYGFT--HLSTGELLRQELTSESERSKLIRD-IMERGDL 65 Query: 592 IKKGKMCCLFINDLDAGAGRMGG 660 + G + L + A G G Sbjct: 66 VPSGVVLELLKEAMVASLGNTKG 88
>FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3.4.24.-)| Length = 627 Score = 35.4 bits (80), Expect = 0.16 Identities = 26/97 (26%), Positives = 44/97 (45%), Gaps = 5/97 (5%) Frame = +1 Query: 394 TLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRY 573 T KIP + + G G GK+ + + + G+ +S E G A +R + Sbjct: 198 TAVGAKIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLF 257 Query: 574 REAADMIKKGKMCCLFINDLDA-----GAGRMGGTTQ 669 ++A K+ C +FI+++DA GAG GG + Sbjct: 258 KKA----KENAPCLIFIDEIDAVGRQRGAGIGGGNDE 290
>FTSH_PORPU (P51327) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 628 Score = 35.4 bits (80), Expect = 0.16 Identities = 30/116 (25%), Positives = 50/116 (43%), Gaps = 1/116 (0%) Frame = +1 Query: 319 NTMGGFYIAPAFMDKLVVHLSK-NFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGI 495 N + G A ++V L + T KIP + + G G GK+ + + + G+ Sbjct: 173 NDVAGVEEAKEEFQEVVTFLKQPESFTAVGAKIPKGVLLVGPPGTGKTLLAKAIAGEAGV 232 Query: 496 NPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGT 663 +S E G A +R +++A D C +FI+++DA GR GT Sbjct: 233 PFFSISGSEFVEMFVGVGASRVRDLFKKAKD----NAPCIVFIDEIDA-VGRQRGT 283
>FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 760 Score = 35.4 bits (80), Expect = 0.16 Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 5/89 (5%) Frame = +1 Query: 409 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 588 KIP + ++G G GK+ V + G+ +S + G A +R + +A Sbjct: 194 KIPKGVLLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQA-- 251 Query: 589 MIKKGKMCCLFINDLDA-----GAGRMGG 660 K+ C +F++++DA GAG GG Sbjct: 252 --KQNSPCIIFVDEIDAVGRQRGAGLGGG 278
>FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 760 Score = 35.4 bits (80), Expect = 0.16 Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 5/89 (5%) Frame = +1 Query: 409 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 588 KIP + ++G G GK+ V + G+ +S + G A +R + +A Sbjct: 194 KIPKGVLLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQA-- 251 Query: 589 MIKKGKMCCLFINDLDA-----GAGRMGG 660 K+ C +F++++DA GAG GG Sbjct: 252 --KQNSPCIIFVDEIDAVGRQRGAGLGGG 278
>KAD5_HUMAN (Q9Y6K8) Adenylate kinase isoenzyme 5 (EC 2.7.4.3) (ATP-AMP| transphosphorylase) Length = 198 Score = 35.4 bits (80), Expect = 0.16 Identities = 29/83 (34%), Positives = 38/83 (45%), Gaps = 3/83 (3%) Frame = +1 Query: 421 ILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL---ESGNAGEPAKLIRQRYREAADM 591 I+ I GG G GK QCE + K G +S GEL E + E +KLIR E D+ Sbjct: 13 IIFIIGGPGSGKGTQCEKLVEKYGFT--HLSTGELLREELASESERSKLIRD-IMERGDL 69 Query: 592 IKKGKMCCLFINDLDAGAGRMGG 660 + G + L + A G G Sbjct: 70 VPSGIVLELLKEAMVASLGDTRG 92
>CDCH_HALSA (Q9HPF0) Protein cdcH| Length = 742 Score = 35.0 bits (79), Expect = 0.21 Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 3/92 (3%) Frame = +1 Query: 394 TLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRY 573 T ++ P + ++G G GK+ + V + N I + +L S GE K IRQ + Sbjct: 489 TRMGVEPPAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQTF 548 Query: 574 REAADMIKKGKMCCLFINDLDA---GAGRMGG 660 R+A + +F ++LD+ G G+ GG Sbjct: 549 RKARQVAP----TVIFFDELDSLAPGRGQTGG 576
>PRS7_YEAST (P33299) 26S protease regulatory subunit 7 homolog (CIM5 protein)| (TAT-binding homolog 3) Length = 467 Score = 34.7 bits (78), Expect = 0.27 Identities = 24/89 (26%), Positives = 42/89 (47%) Frame = +1 Query: 382 KNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLI 561 + F TL I P + ++G G GK+ V + I + EL GE A+++ Sbjct: 233 ERFATL-GIDPPKGILLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMV 291 Query: 562 RQRYREAADMIKKGKMCCLFINDLDAGAG 648 R+ + +M + K C +F +++DA G Sbjct: 292 RELF----EMARTKKACIIFFDEIDAVGG 316
>PSMR_METMP (Q6LWR0) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 407 Score = 34.7 bits (78), Expect = 0.27 Identities = 20/74 (27%), Positives = 38/74 (51%) Frame = +1 Query: 430 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 609 ++G G GK+ + V + + + + EL GE AKL+R ++ + K+ Sbjct: 187 LYGPPGTGKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFK----LAKEKSP 242 Query: 610 CCLFINDLDAGAGR 651 C +FI+++DA A + Sbjct: 243 CIIFIDEIDAVASK 256
>RECA_IDILO (Q5QUB8) Protein recA (Recombinase A)| Length = 372 Score = 34.7 bits (78), Expect = 0.27 Identities = 19/66 (28%), Positives = 30/66 (45%) Frame = +1 Query: 472 LVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGR 651 +V + + P GE+ + G A+L+ Q R+ IKK C+FIN + G Sbjct: 141 IVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTSNIKKSNTMCIFINQIRMKIGV 200 Query: 652 MGGTTQ 669 M G + Sbjct: 201 MFGNPE 206
>FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3.4.24.-)| Length = 616 Score = 34.3 bits (77), Expect = 0.35 Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 5/92 (5%) Frame = +1 Query: 409 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 588 KIP + + G G GK+ + V + G+ +S E G A +R + +A Sbjct: 192 KIPKGVLLVGPPGTGKTLLAKAVAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFEQA-- 249 Query: 589 MIKKGKMCCLFINDLDA-----GAGRMGGTTQ 669 K C +FI+++DA GAG GG + Sbjct: 250 --KANAPCIVFIDEIDAVGRQRGAGLGGGNDE 279
>FTSH3_SYNY3 (P73437) Cell division protein ftsH homolog 3 (EC 3.4.24.-)| Length = 628 Score = 33.9 bits (76), Expect = 0.46 Identities = 35/135 (25%), Positives = 56/135 (41%), Gaps = 9/135 (6%) Frame = +1 Query: 283 YVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSK--NFMTLPN------IKIPLILGIWG 438 YV K FD+ G +++ LS+ +F+ P KIP + + G Sbjct: 163 YVEGDSTKVTFDDVAG--------VEEAKTELSEVVDFLKFPQRYTALGAKIPKGVLLVG 214 Query: 439 GKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCL 618 G GK+ + + G+ ++S E G A +R + +A KK C + Sbjct: 215 PPGTGKTLLAKAAAGEAGVPFFIISGSEFVELFVGAGAARVRDLFEQA----KKQAPCIV 270 Query: 619 FINDLDA-GAGRMGG 660 FI++LDA G R G Sbjct: 271 FIDELDAIGKSRASG 285
>YMEL1_HUMAN (Q96TA2) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) (Meg-4) (Presenilin-associated metalloprotease) (PAMP) Length = 773 Score = 33.9 bits (76), Expect = 0.46 Identities = 28/97 (28%), Positives = 42/97 (43%), Gaps = 2/97 (2%) Frame = +1 Query: 367 VVHLSKN--FMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNA 540 VV KN T+ K+P + + G G GK+ V + + S E + Sbjct: 354 VVEFLKNPQKFTILGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFV 413 Query: 541 GEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGR 651 G A IR +REA K C +FI++LD+ G+ Sbjct: 414 GVGASRIRNLFREA----KANAPCVIFIDELDSVGGK 446
>RECA_CHRVI (O32377) Protein recA (Recombinase A)| Length = 347 Score = 33.5 bits (75), Expect = 0.60 Identities = 25/108 (23%), Positives = 48/108 (44%) Frame = +1 Query: 346 PAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 525 P + +KL V+++ ++ P+ L I + + +V + + P GE+ Sbjct: 101 PVYAEKLGVNMTDLLVSQPDTG-EQALEITDMLVRSGAVDVVVVDSVAALTPKAEIEGEM 159 Query: 526 ESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQ 669 + G A+L+ Q R+ IK+ C +FIN + G M G+ + Sbjct: 160 GDSHVGLQARLMSQALRKLTGNIKRSNCCVIFINQIRMKIGVMFGSPE 207
>FTSH2_SYNY3 (P73179) Cell division protein ftsH homolog 2 (EC 3.4.24.-)| Length = 665 Score = 33.5 bits (75), Expect = 0.60 Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 5/92 (5%) Frame = +1 Query: 409 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 588 KIP + + G G GK+ + + + G+ +S E G A +R +++A Sbjct: 242 KIPRGVLLIGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKA-- 299 Query: 589 MIKKGKMCCLFINDLDA-----GAGRMGGTTQ 669 K+ C +FI+++DA G G GG + Sbjct: 300 --KENAPCLVFIDEIDAVGRQRGVGYGGGNDE 329
>PRS7_SCHPO (O42931) 26S protease regulatory subunit 7 homolog| Length = 438 Score = 33.5 bits (75), Expect = 0.60 Identities = 19/73 (26%), Positives = 35/73 (47%) Frame = +1 Query: 430 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 609 ++G G GK+ V + I + EL GE A+++R+ + +M + K Sbjct: 218 LYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELF----EMARTKKA 273 Query: 610 CCLFINDLDAGAG 648 C +F +++DA G Sbjct: 274 CIIFFDEIDAIGG 286
>YMEL1_RAT (Q925S8) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) (Meg-4) Length = 715 Score = 33.5 bits (75), Expect = 0.60 Identities = 23/81 (28%), Positives = 36/81 (44%) Frame = +1 Query: 409 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 588 K+P + + G G GK+ V + + S E + G A IR +REA Sbjct: 312 KLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREA-- 369 Query: 589 MIKKGKMCCLFINDLDAGAGR 651 K C +FI++LD+ G+ Sbjct: 370 --KANAPCVIFIDELDSVGGK 388
>YMEL1_MOUSE (O88967) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) Length = 715 Score = 33.5 bits (75), Expect = 0.60 Identities = 23/81 (28%), Positives = 36/81 (44%) Frame = +1 Query: 409 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 588 K+P + + G G GK+ V + + S E + G A IR +REA Sbjct: 312 KLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREA-- 369 Query: 589 MIKKGKMCCLFINDLDAGAGR 651 K C +FI++LD+ G+ Sbjct: 370 --KANAPCVIFIDELDSVGGK 388
>NVL_MOUSE (Q9DBY8) Nuclear valosin-containing protein-like (Nuclear VCP-like| protein) (NVLp) Length = 855 Score = 33.5 bits (75), Expect = 0.60 Identities = 20/68 (29%), Positives = 34/68 (50%) Frame = +1 Query: 436 GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCC 615 G G GK+ + V + G+N I + EL + GE + +RQ ++ A K C Sbjct: 621 GPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRA----KNSAPCV 676 Query: 616 LFINDLDA 639 +F +++DA Sbjct: 677 IFFDEVDA 684 Score = 33.5 bits (75), Expect = 0.60 Identities = 19/68 (27%), Positives = 34/68 (50%) Frame = +1 Query: 436 GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCC 615 G G GK+ + ++ + + ++A E+ SG +GE Q+ RE D C Sbjct: 304 GPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGES----EQKLRELFDQAVSNAPCI 359 Query: 616 LFINDLDA 639 +FI+++DA Sbjct: 360 VFIDEIDA 367
>PSMR2_HALSA (Q9HRW6) Proteasome-activating nucleotidase 2 (Proteasome| regulatory subunit 2) Length = 407 Score = 33.5 bits (75), Expect = 0.60 Identities = 22/72 (30%), Positives = 37/72 (51%) Frame = +1 Query: 436 GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCC 615 G G GK+ + V ++ + I M+ EL GE AKL+R ++ A D + Sbjct: 190 GPPGTGKTLMAKAVASQTDASFIKMAGSELVHKFIGEGAKLVRDLFQVARD----HEPAV 245 Query: 616 LFINDLDAGAGR 651 +FI+++DA A + Sbjct: 246 VFIDEIDAIASK 257
>NVL_HUMAN (O15381) Nuclear valosin-containing protein-like (Nuclear VCP-like| protein) (NVLp) Length = 856 Score = 33.5 bits (75), Expect = 0.60 Identities = 20/68 (29%), Positives = 34/68 (50%) Frame = +1 Query: 436 GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCC 615 G G GK+ + V + G+N I + EL + GE + +RQ ++ A K C Sbjct: 622 GPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRA----KNSAPCV 677 Query: 616 LFINDLDA 639 +F +++DA Sbjct: 678 IFFDEVDA 685 Score = 33.1 bits (74), Expect = 0.79 Identities = 17/68 (25%), Positives = 36/68 (52%) Frame = +1 Query: 436 GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCC 615 G G GK+ + ++ + + ++A E+ SG +GE + +R+ + +A C Sbjct: 305 GPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAV----SNAPCI 360 Query: 616 LFINDLDA 639 +FI+++DA Sbjct: 361 IFIDEIDA 368
>YME1_YEAST (P32795) Protein YME1 (EC 3.4.24.-) (TAT-binding homolog 11) (OSD1| protein) Length = 747 Score = 33.5 bits (75), Expect = 0.60 Identities = 22/81 (27%), Positives = 37/81 (45%) Frame = +1 Query: 409 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 588 K+P + + G G GK+ + G++ MS E + G AK IR + +A Sbjct: 312 KLPKGVLLTGPPGTGKTLLARATAGEAGVDFFFMSGSEFDEVYVGVGAKRIRDLFAQA-- 369 Query: 589 MIKKGKMCCLFINDLDAGAGR 651 + +FI++LDA G+ Sbjct: 370 --RSRAPAIIFIDELDAIGGK 388
>RIX7_YEAST (Q07844) Ribosome biogenesis ATPase RIX7| Length = 837 Score = 33.5 bits (75), Expect = 0.60 Identities = 21/70 (30%), Positives = 33/70 (47%) Frame = +1 Query: 430 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 609 +WG G GK+ + V + N I + EL + GE + IRQ + A + Sbjct: 572 LWGPPGCGKTLLAKAVANESRANFISIKGPELLNKYVGESERSIRQVFTRARASVP---- 627 Query: 610 CCLFINDLDA 639 C +F ++LDA Sbjct: 628 CVIFFDELDA 637 Score = 32.7 bits (73), Expect = 1.0 Identities = 22/78 (28%), Positives = 37/78 (47%) Frame = +1 Query: 436 GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCC 615 G G GK+ + ++ + I +SA + SG +GE K IR + EA + C Sbjct: 246 GPPGCGKTSIANALAGELQVPFISISAPSVVSGMSGESEKKIRDLFDEARSLAP----CL 301 Query: 616 LFINDLDAGAGRMGGTTQ 669 +F +++DA + G Q Sbjct: 302 VFFDEIDAITPKRDGGAQ 319
>PEX6_KLULA (Q6CPV1) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1000 Score = 33.1 bits (74), Expect = 0.79 Identities = 19/75 (25%), Positives = 37/75 (49%) Frame = +1 Query: 433 WGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMC 612 +G G GK+ + + + +N + EL + GE +R+ +++A D K C Sbjct: 741 YGPPGTGKTLLAKAIASNFSLNFFSVKGPELLNMYIGESEANVRRVFQKARD----AKPC 796 Query: 613 CLFINDLDAGAGRMG 657 +F ++LD+ A + G Sbjct: 797 VIFFDELDSVAPKRG 811
>PEX1_PICPA (P46463) Peroxisome biosynthesis protein PAS1 (Peroxin-1)| Length = 1157 Score = 33.1 bits (74), Expect = 0.79 Identities = 20/76 (26%), Positives = 37/76 (48%) Frame = +1 Query: 430 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 609 ++G G GK+ V A+ G+N I + E+ + G + +R+ + A + K Sbjct: 838 LYGYPGCGKTLLASAVAAQCGLNFISIKGPEILNKYIGPSEQSVRELFERA----QAAKP 893 Query: 610 CCLFINDLDAGAGRMG 657 C LF ++ D+ A + G Sbjct: 894 CILFFDEFDSIAPKRG 909
>FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 679 Score = 33.1 bits (74), Expect = 0.79 Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 5/89 (5%) Frame = +1 Query: 409 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 588 +IP + + G G GK+ V + G+ +S + G A +R + A Sbjct: 197 RIPKGVLLVGPPGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENA-- 254 Query: 589 MIKKGKMCCLFINDLDA-----GAGRMGG 660 KK C +FI+++DA GAG GG Sbjct: 255 --KKNAPCIIFIDEIDAVGRQRGAGLGGG 281
>TERA_XENLA (P23787) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) Length = 805 Score = 32.7 bits (73), Expect = 1.0 Identities = 22/78 (28%), Positives = 39/78 (50%) Frame = +1 Query: 406 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 585 +K P + ++G G GK+ V + G +++ E+ S AGE +R+ + EA Sbjct: 235 VKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA- 293 Query: 586 DMIKKGKMCCLFINDLDA 639 +K +FI++LDA Sbjct: 294 ---EKNAPAIIFIDELDA 308
>TERA_RAT (P46462) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 32.7 bits (73), Expect = 1.0 Identities = 22/78 (28%), Positives = 39/78 (50%) Frame = +1 Query: 406 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 585 +K P + ++G G GK+ V + G +++ E+ S AGE +R+ + EA Sbjct: 234 VKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA- 292 Query: 586 DMIKKGKMCCLFINDLDA 639 +K +FI++LDA Sbjct: 293 ---EKNAPAIIFIDELDA 307
>TERA_PIG (P03974) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 32.7 bits (73), Expect = 1.0 Identities = 22/78 (28%), Positives = 39/78 (50%) Frame = +1 Query: 406 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 585 +K P + ++G G GK+ V + G +++ E+ S AGE +R+ + EA Sbjct: 234 VKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA- 292 Query: 586 DMIKKGKMCCLFINDLDA 639 +K +FI++LDA Sbjct: 293 ---EKNAPAIIFIDELDA 307
>TERA_MOUSE (Q01853) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 32.7 bits (73), Expect = 1.0 Identities = 22/78 (28%), Positives = 39/78 (50%) Frame = +1 Query: 406 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 585 +K P + ++G G GK+ V + G +++ E+ S AGE +R+ + EA Sbjct: 234 VKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA- 292 Query: 586 DMIKKGKMCCLFINDLDA 639 +K +FI++LDA Sbjct: 293 ---EKNAPAIIFIDELDA 307
>TERA_HUMAN (P55072) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 32.7 bits (73), Expect = 1.0 Identities = 22/78 (28%), Positives = 39/78 (50%) Frame = +1 Query: 406 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 585 +K P + ++G G GK+ V + G +++ E+ S AGE +R+ + EA Sbjct: 234 VKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA- 292 Query: 586 DMIKKGKMCCLFINDLDA 639 +K +FI++LDA Sbjct: 293 ---EKNAPAIIFIDELDA 307
>PEX6_PICAN (Q9UVU5) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1135 Score = 32.7 bits (73), Expect = 1.0 Identities = 19/75 (25%), Positives = 36/75 (48%) Frame = +1 Query: 433 WGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMC 612 +G G GK+ + + +N + EL + GE +R+ +++A D K C Sbjct: 852 YGPPGTGKTLLAKAIATNFALNFFSVKGPELLNMYIGESEANVRRVFQKARD----AKPC 907 Query: 613 CLFINDLDAGAGRMG 657 +F ++LD+ A + G Sbjct: 908 VIFFDELDSVAPKRG 922
>PEX6_ASHGO (Q74Z13) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1021 Score = 32.7 bits (73), Expect = 1.0 Identities = 20/75 (26%), Positives = 35/75 (46%) Frame = +1 Query: 433 WGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMC 612 +G G GK+ + V +N + EL + GE +R+ ++ A D K C Sbjct: 762 YGPPGTGKTLLAKAVATNFSLNFFSVKGPELLNMYIGESEANVRRVFQRARD----AKPC 817 Query: 613 CLFINDLDAGAGRMG 657 +F ++LD+ A + G Sbjct: 818 VIFFDELDSVAPKRG 832
>PRS7_CAEEL (Q18787) Probable 26S protease regulatory subunit 7| Length = 435 Score = 32.7 bits (73), Expect = 1.0 Identities = 19/73 (26%), Positives = 35/73 (47%) Frame = +1 Query: 430 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 609 ++G G GK+ V + I + EL GE A+++R+ + +M + K Sbjct: 216 LYGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELF----EMARTKKA 271 Query: 610 CCLFINDLDAGAG 648 C +F +++DA G Sbjct: 272 CLIFFDEIDAVGG 284
>RECA_GEOSL (P62215) Protein recA (Recombinase A)| Length = 338 Score = 32.7 bits (73), Expect = 1.0 Identities = 16/51 (31%), Positives = 25/51 (49%) Frame = +1 Query: 517 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQ 669 GE+ + G A+L+ Q R+ +I K C +FIN + G M G + Sbjct: 157 GEMGDSHMGLQARLMSQALRKLTGIISKSNCCVIFINQIRMKIGVMFGNPE 207
>PEX6_DEBHA (Q6BS73) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1198 Score = 32.7 bits (73), Expect = 1.0 Identities = 19/75 (25%), Positives = 36/75 (48%) Frame = +1 Query: 433 WGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMC 612 +G G GK+ + + +N + EL + GE +R+ +++A D K C Sbjct: 878 YGPPGTGKTLLAKAIATNFSLNFFSVKGPELLNMYIGESEANVRRVFQKARD----AKPC 933 Query: 613 CLFINDLDAGAGRMG 657 +F ++LD+ A + G Sbjct: 934 VIFFDELDSVAPKRG 948
>CDC48_SCHPO (Q9P3A7) Cell division cycle protein 48| Length = 815 Score = 32.7 bits (73), Expect = 1.0 Identities = 21/78 (26%), Positives = 39/78 (50%) Frame = +1 Query: 406 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 585 IK P + ++G G GK+ V + G +++ E+ S AGE +R+ + EA Sbjct: 255 IKPPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEA- 313 Query: 586 DMIKKGKMCCLFINDLDA 639 +K +FI+++D+ Sbjct: 314 ---EKNSPAIIFIDEIDS 328
>PRS6A_ORYSA (P46465) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 429 Score = 32.7 bits (73), Expect = 1.0 Identities = 20/78 (25%), Positives = 39/78 (50%) Frame = +1 Query: 406 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 585 I+ P + ++G G GK+ A+ + ++ +L G+ AKL+ R+A Sbjct: 207 IRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLV----RDAF 262 Query: 586 DMIKKGKMCCLFINDLDA 639 + K+ C +FI+++DA Sbjct: 263 QLAKEKSPCIIFIDEIDA 280
>RECA_VIBCH (P45383) Protein recA (Recombinase A)| Length = 354 Score = 32.3 bits (72), Expect = 1.3 Identities = 23/108 (21%), Positives = 46/108 (42%) Frame = +1 Query: 346 PAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 525 P + KL V++ + ++ P+ L I + + +V + + P GE+ Sbjct: 100 PVYAKKLGVNIDELLVSQPDTG-EQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEM 158 Query: 526 ESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQ 669 + G A+++ Q R+ +K+ C+FIN + G M G + Sbjct: 159 GDSHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPE 206
>RECA_LISMO (Q9L723) Protein recA (Recombinase A)| Length = 348 Score = 32.3 bits (72), Expect = 1.3 Identities = 16/51 (31%), Positives = 26/51 (50%) Frame = +1 Query: 517 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQ 669 GE+ + G A+L+ Q R+ + +I K K +FIN + G M G + Sbjct: 155 GEMGDAHVGLQARLMSQALRKLSGVINKSKTIAIFINQIREKVGVMFGNPE 205
>RECA_LISMF (Q71ZS2) Protein recA (Recombinase A)| Length = 348 Score = 32.3 bits (72), Expect = 1.3 Identities = 16/51 (31%), Positives = 26/51 (50%) Frame = +1 Query: 517 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQ 669 GE+ + G A+L+ Q R+ + +I K K +FIN + G M G + Sbjct: 155 GEMGDAHVGLQARLMSQALRKLSGVINKSKTIAIFINQIREKVGVMFGNPE 205
>RECA_LISIN (Q92BV7) Protein recA (Recombinase A)| Length = 348 Score = 32.3 bits (72), Expect = 1.3 Identities = 16/51 (31%), Positives = 26/51 (50%) Frame = +1 Query: 517 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQ 669 GE+ + G A+L+ Q R+ + +I K K +FIN + G M G + Sbjct: 155 GEMGDAHVGLQARLMSQALRKLSGVINKSKTIAIFINQIREKVGVMFGNPE 205
>RECA_CHLTE (O52393) Protein recA (Recombinase A)| Length = 346 Score = 32.3 bits (72), Expect = 1.3 Identities = 18/51 (35%), Positives = 24/51 (47%) Frame = +1 Query: 517 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQ 669 GE+ G A+L+ Q R+ I K CLFIN L G M G+ + Sbjct: 170 GEMGDSVVGLQARLMSQALRKLTGAISKSSSVCLFINQLRDKIGVMYGSPE 220
>RECA_AERSA (P94190) Protein recA (Recombinase A)| Length = 353 Score = 32.3 bits (72), Expect = 1.3 Identities = 18/66 (27%), Positives = 30/66 (45%) Frame = +1 Query: 472 LVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGR 651 +V + + P GE+ + G A+L+ Q R+ IK C+FIN + G Sbjct: 141 IVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKNANCLCIFINQIRMKIGV 200 Query: 652 MGGTTQ 669 M G+ + Sbjct: 201 MFGSPE 206
>PSMR_METKA (Q8TX03) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 436 Score = 32.3 bits (72), Expect = 1.3 Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 1/80 (1%) Frame = +1 Query: 430 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 609 ++G G GK+ + V I ++A EL GE A+L+R+ + ++ ++ Sbjct: 218 LYGPPGTGKTLLAKAVANHADATFIRLAAPELVQKFIGEGARLVRELF----ELAREKAP 273 Query: 610 CCLFINDLDA-GAGRMGGTT 666 +FI+++DA GA RM T Sbjct: 274 SIIFIDEIDAIGARRMRDAT 293
>RECA2_MYXXA (P48292) Protein recA 2 (Recombinase A 2)| Length = 358 Score = 32.3 bits (72), Expect = 1.3 Identities = 16/51 (31%), Positives = 25/51 (49%) Frame = +1 Query: 517 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQ 669 GE+ + G A+L+ Q R+ I K + C +FIN + G M G + Sbjct: 160 GEMGDAHMGVQARLMSQALRKLTGTIAKSQTCVIFINQIRMKIGVMFGNPE 210
>RECA_VIBVY (Q7MHR4) Protein recA (Recombinase A)| Length = 349 Score = 32.3 bits (72), Expect = 1.3 Identities = 23/108 (21%), Positives = 46/108 (42%) Frame = +1 Query: 346 PAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 525 P + KL V++ + ++ P+ L I + + +V + + P GE+ Sbjct: 100 PVYAKKLGVNIDQLLVSQPDTG-EQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEM 158 Query: 526 ESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQ 669 + G A+++ Q R+ +K+ C+FIN + G M G + Sbjct: 159 GDSHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPE 206
>RECA_VIBVU (Q8DC51) Protein recA (Recombinase A)| Length = 349 Score = 32.3 bits (72), Expect = 1.3 Identities = 23/108 (21%), Positives = 46/108 (42%) Frame = +1 Query: 346 PAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 525 P + KL V++ + ++ P+ L I + + +V + + P GE+ Sbjct: 100 PVYAKKLGVNIDQLLVSQPDTG-EQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEM 158 Query: 526 ESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQ 669 + G A+++ Q R+ +K+ C+FIN + G M G + Sbjct: 159 GDSHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPE 206
>PRS6A_LYCES (P54776) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) (Mg(2+)-dependent ATPase 1) (LEMA-1) Length = 423 Score = 32.3 bits (72), Expect = 1.3 Identities = 18/70 (25%), Positives = 35/70 (50%) Frame = +1 Query: 430 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 609 ++G G GK+ A+ + ++ +L G+ AKL+ R+A + K+ Sbjct: 209 LYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLV----RDAFQLAKEKSP 264 Query: 610 CCLFINDLDA 639 C +FI+++DA Sbjct: 265 CIIFIDEIDA 274
>KCY_MOUSE (Q9DBP5) UMP-CMP kinase (EC 2.7.4.14) (Cytidylate kinase)| (Deoxycytidylate kinase) (Cytidine monophosphate kinase) (Uridine monophosphate/cytidine monophosphate kinase) (UMP/CMP kinase) (UMP/CMPK) (Uridine monophosphate kinase) Length = 196 Score = 32.0 bits (71), Expect = 1.8 Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 1/66 (1%) Frame = +1 Query: 415 PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD-M 591 PL++ + GG G GK QC + K G +SAGEL P +Y E + Sbjct: 3 PLVVFVLGGPGAGKGTQCARIVEKYGYT--HLSAGELLRDERKNP----DSQYGELIEKY 56 Query: 592 IKKGKM 609 IK+GK+ Sbjct: 57 IKEGKI 62
>KCY_HUMAN (P30085) UMP-CMP kinase (EC 2.7.4.14) (Cytidylate kinase)| (Deoxycytidylate kinase) (Cytidine monophosphate kinase) (Uridine monophosphate/cytidine monophosphate kinase) (UMP/CMP kinase) (UMP/CMPK) (Uridine monophosphate kinase) Length = 196 Score = 32.0 bits (71), Expect = 1.8 Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 1/66 (1%) Frame = +1 Query: 415 PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD-M 591 PL++ + GG G GK QC + K G +SAGEL P +Y E + Sbjct: 3 PLVVFVLGGPGAGKGTQCARIVEKYGYT--HLSAGELLRDERKNP----DSQYGELIEKY 56 Query: 592 IKKGKM 609 IK+GK+ Sbjct: 57 IKEGKI 62
>FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chloroplast| precursor (EC 3.4.24.-) Length = 716 Score = 32.0 bits (71), Expect = 1.8 Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 5/92 (5%) Frame = +1 Query: 409 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 588 KIP + G G GK+ V + G+ +A E G A +R + +A Sbjct: 293 KIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKA-- 350 Query: 589 MIKKGKMCCLFINDLDA-----GAGRMGGTTQ 669 K C +FI+++DA GAG GG + Sbjct: 351 --KSKAPCIVFIDEIDAVGRQRGAGMGGGNDE 380
>RECA_CLOTE (Q895I5) Protein recA (Recombinase A)| Length = 350 Score = 32.0 bits (71), Expect = 1.8 Identities = 17/51 (33%), Positives = 25/51 (49%) Frame = +1 Query: 517 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQ 669 GE+ + G A+L+ Q R+ A I K +FIN L G M G+ + Sbjct: 156 GEMGDSHVGLQARLMSQALRKLAGSINKSNCVAIFINQLREKVGIMFGSPE 206
>FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) (DS9) Length = 714 Score = 32.0 bits (71), Expect = 1.8 Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 5/92 (5%) Frame = +1 Query: 409 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 588 KIP + G G GK+ V + G+ +A E G A +R + +A Sbjct: 284 KIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKA-- 341 Query: 589 MIKKGKMCCLFINDLDA-----GAGRMGGTTQ 669 K C +FI+++DA GAG GG + Sbjct: 342 --KSKAPCIVFIDEIDAVGRQRGAGMGGGNDE 371
>FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)| Length = 644 Score = 32.0 bits (71), Expect = 1.8 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 5/89 (5%) Frame = +1 Query: 409 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 588 KIP + + G G GK+ + + + + +S + G A +R + +A Sbjct: 183 KIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQA-- 240 Query: 589 MIKKGKMCCLFINDLDA-----GAGRMGG 660 KK C +FI+++DA GAG GG Sbjct: 241 --KKAAPCIIFIDEIDAVGRQRGAGLGGG 267
>FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 32.0 bits (71), Expect = 1.8 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 5/89 (5%) Frame = +1 Query: 409 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 588 KIP + + G G GK+ + + + + +S + G A +R + +A Sbjct: 183 KIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQA-- 240 Query: 589 MIKKGKMCCLFINDLDA-----GAGRMGG 660 KK C +FI+++DA GAG GG Sbjct: 241 --KKAAPCIIFIDEIDAVGRQRGAGLGGG 267
>FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 32.0 bits (71), Expect = 1.8 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 5/89 (5%) Frame = +1 Query: 409 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 588 KIP + + G G GK+ + + + + +S + G A +R + +A Sbjct: 183 KIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQA-- 240 Query: 589 MIKKGKMCCLFINDLDA-----GAGRMGG 660 KK C +FI+++DA GAG GG Sbjct: 241 --KKAAPCIIFIDEIDAVGRQRGAGLGGG 267
>FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)| Length = 644 Score = 32.0 bits (71), Expect = 1.8 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 5/89 (5%) Frame = +1 Query: 409 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 588 KIP + + G G GK+ + + + + +S + G A +R + +A Sbjct: 183 KIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQA-- 240 Query: 589 MIKKGKMCCLFINDLDA-----GAGRMGG 660 KK C +FI+++DA GAG GG Sbjct: 241 --KKAAPCIIFIDEIDAVGRQRGAGLGGG 267
>FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 32.0 bits (71), Expect = 1.8 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 5/89 (5%) Frame = +1 Query: 409 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 588 KIP + + G G GK+ + + + + +S + G A +R + +A Sbjct: 183 KIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQA-- 240 Query: 589 MIKKGKMCCLFINDLDA-----GAGRMGG 660 KK C +FI+++DA GAG GG Sbjct: 241 --KKAAPCIIFIDEIDAVGRQRGAGLGGG 267
>RECA_VIBAN (P26348) Protein recA (Recombinase A)| Length = 348 Score = 32.0 bits (71), Expect = 1.8 Identities = 22/108 (20%), Positives = 46/108 (42%) Frame = +1 Query: 346 PAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 525 P + KL V++ + ++ P+ L I + + ++ + + P GE+ Sbjct: 100 PIYAKKLGVNIDELLVSQPDTG-EQALEICDALARSGAIDVIVIDSVAALTPKAEIEGEM 158 Query: 526 ESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQ 669 + G A+++ Q R+ +K+ C+FIN + G M G + Sbjct: 159 GDSHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPE 206
>PRS6A_BRACM (O23894) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 424 Score = 32.0 bits (71), Expect = 1.8 Identities = 18/70 (25%), Positives = 35/70 (50%) Frame = +1 Query: 430 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 609 ++G G GK+ A+ + ++ +L G+ AKL+ R+A + K+ Sbjct: 210 LYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLV----RDAFQLAKEKAP 265 Query: 610 CCLFINDLDA 639 C +FI+++DA Sbjct: 266 CIIFIDEIDA 275
>PEX6_PICPA (P33289) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome| biosynthesis protein PAS5) Length = 1165 Score = 32.0 bits (71), Expect = 1.8 Identities = 19/75 (25%), Positives = 35/75 (46%) Frame = +1 Query: 433 WGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMC 612 +G G GK+ + + +N + EL + GE +R+ ++ A D K C Sbjct: 858 YGPPGTGKTLLAKAIATNFALNFFSVKGPELLNMYIGESEANVRKVFQRARD----AKPC 913 Query: 613 CLFINDLDAGAGRMG 657 +F ++LD+ A + G Sbjct: 914 VVFFDELDSVAPKRG 928
>CELR2_MOUSE (Q9R0M0) Cadherin EGF LAG seven-pass G-type receptor 2 precursor| (Flamingo 1) (mFmi1) Length = 2920 Score = 32.0 bits (71), Expect = 1.8 Identities = 28/78 (35%), Positives = 35/78 (44%), Gaps = 6/78 (7%) Frame = +3 Query: 366 CCP--SLQKLHDPAQHQDPTHLGYLGRQGSRKIIPV*ACVRQDGHQPHHDECRRAGE--- 530 C P SL ++ DP Q P G +GRQ R P A V +G + ++D C RA E Sbjct: 1927 CYPTGSLSRVCDPEDGQCPCKPGVIGRQCDRCDNPF-AEVTTNGCEVNYDSCPRAIEAGI 1985 Query: 531 -WERWRASQAHQAAVP*G 581 W R R A P G Sbjct: 1986 WWPRTRFGLPAAAPCPKG 2003
>PRS7_MOUSE (P46471) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 32.0 bits (71), Expect = 1.8 Identities = 19/73 (26%), Positives = 35/73 (47%) Frame = +1 Query: 430 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 609 ++G G GK+ V + I + EL GE A+++R+ + +M + K Sbjct: 213 LFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELF----EMARTKKA 268 Query: 610 CCLFINDLDAGAG 648 C +F +++DA G Sbjct: 269 CLIFFDEIDAIGG 281
>PRS7_HUMAN (P35998) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 32.0 bits (71), Expect = 1.8 Identities = 19/73 (26%), Positives = 35/73 (47%) Frame = +1 Query: 430 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 609 ++G G GK+ V + I + EL GE A+++R+ + +M + K Sbjct: 213 LFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELF----EMARTKKA 268 Query: 610 CCLFINDLDAGAG 648 C +F +++DA G Sbjct: 269 CLIFFDEIDAIGG 281
>G6PI_PSEHT (Q3IKH4) Glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI)| (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) Length = 548 Score = 32.0 bits (71), Expect = 1.8 Identities = 19/62 (30%), Positives = 29/62 (46%) Frame = +1 Query: 283 YVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSF 462 Y SQ + YD M Y+ M+ H++ T+P +P+I G+ G GQ + Sbjct: 328 YTSQAILPYDQALHMLPAYLQQGEMESNGKHVNFAGETVPYTTVPIIWGMTGINGQHAFY 387 Query: 463 QC 468 QC Sbjct: 388 QC 389
>FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chloroplast| precursor (EC 3.4.24.-) Length = 704 Score = 32.0 bits (71), Expect = 1.8 Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 5/92 (5%) Frame = +1 Query: 409 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 588 KIP + G G GK+ V + G+ +A E G A +R + +A Sbjct: 281 KIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKA-- 338 Query: 589 MIKKGKMCCLFINDLDA-----GAGRMGGTTQ 669 K C +FI+++DA GAG GG + Sbjct: 339 --KSKAPCIVFIDEIDAVGRQRGAGMGGGNDE 368
>CELR2_HUMAN (Q9HCU4) Cadherin EGF LAG seven-pass G-type receptor 2 precursor| (Epidermal growth factor-like 2) (Multiple epidermal growth factor-like domains 3) (Flamingo 1) Length = 2923 Score = 32.0 bits (71), Expect = 1.8 Identities = 28/78 (35%), Positives = 35/78 (44%), Gaps = 6/78 (7%) Frame = +3 Query: 366 CCP--SLQKLHDPAQHQDPTHLGYLGRQGSRKIIPV*ACVRQDGHQPHHDECRRAGE--- 530 C P SL ++ DP Q P G +GRQ R P A V +G + ++D C RA E Sbjct: 1926 CYPTGSLSRVCDPEDGQCPCKPGVIGRQCDRCDNPF-AEVTTNGCEVNYDSCPRAIEAGI 1984 Query: 531 -WERWRASQAHQAAVP*G 581 W R R A P G Sbjct: 1985 WWPRTRFGLPAAAPCPKG 2002
>RECA_CLOAB (P58254) Protein recA (Recombinase A)| Length = 349 Score = 32.0 bits (71), Expect = 1.8 Identities = 17/51 (33%), Positives = 24/51 (47%) Frame = +1 Query: 517 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQ 669 GE+ + G A+L+ Q R+ I K K +FIN L G M G + Sbjct: 156 GEMGDSHVGLQARLMSQALRKLTGSINKSKCIAIFINQLREKVGIMFGNPE 206
>RECA1_LACLA (Q01840) Protein recA, chromosomal (Recombinase A)| Length = 387 Score = 32.0 bits (71), Expect = 1.8 Identities = 17/51 (33%), Positives = 26/51 (50%) Frame = +1 Query: 517 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQ 669 GE+ + G A+++ Q R+ A I K K +FIN L G M G+ + Sbjct: 171 GEIGDSSVGLQARMMSQAMRKLAGHINKTKTTAIFINQLREKVGVMFGSPE 221
>PRS7_XENLA (P46472) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 433 Score = 32.0 bits (71), Expect = 1.8 Identities = 19/73 (26%), Positives = 35/73 (47%) Frame = +1 Query: 430 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 609 ++G G GK+ V + I + EL GE A+++R+ + +M + K Sbjct: 214 LFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELF----EMARTKKA 269 Query: 610 CCLFINDLDAGAG 648 C +F +++DA G Sbjct: 270 CLIFFDEIDAIGG 282
>CDC48_YEAST (P25694) Cell division control protein 48| Length = 835 Score = 32.0 bits (71), Expect = 1.8 Identities = 23/86 (26%), Positives = 42/86 (48%) Frame = +1 Query: 406 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 585 IK P + ++G G GK+ V + G +++ E+ S AGE +R+ + EA Sbjct: 245 IKPPRGVLMYGPPGTGKTLMARAVANETGAFFFLINGPEVMSKMAGESESNLRKAFEEA- 303 Query: 586 DMIKKGKMCCLFINDLDAGAGRMGGT 663 +K +FI+++D+ A + T Sbjct: 304 ---EKNAPAIIFIDEIDSIAPKRDKT 326
>CELR2_RAT (Q9QYP2) Cadherin EGF LAG seven-pass G-type receptor 2 (Multiple| epidermal growth factor-like domains 3) (Fragment) Length = 2144 Score = 32.0 bits (71), Expect = 1.8 Identities = 28/78 (35%), Positives = 35/78 (44%), Gaps = 6/78 (7%) Frame = +3 Query: 366 CCP--SLQKLHDPAQHQDPTHLGYLGRQGSRKIIPV*ACVRQDGHQPHHDECRRAGE--- 530 C P SL ++ DP Q P G +GRQ R P A V +G + ++D C RA E Sbjct: 1151 CYPTGSLSRVCDPEDGQCPCKPGVIGRQCDRCDNPF-AEVTTNGCEVNYDSCPRAIEAGI 1209 Query: 531 -WERWRASQAHQAAVP*G 581 W R R A P G Sbjct: 1210 WWPRTRFGLPAAAPCPKG 1227
>RECA_ACHLA (P29225) Protein recA (Recombinase A)| Length = 331 Score = 32.0 bits (71), Expect = 1.8 Identities = 14/52 (26%), Positives = 28/52 (53%) Frame = +1 Query: 514 AGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQ 669 AG++ + + G A+++ Q R+ + +I K + +FIN + G M G + Sbjct: 156 AGDMSANHVGLQARMMSQAMRKMSGVISKSNVVAIFINQIREKVGVMFGNPE 207
>FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3.4.24.-)| Length = 635 Score = 32.0 bits (71), Expect = 1.8 Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 5/89 (5%) Frame = +1 Query: 409 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 588 KIP + + G G GK+ + + + +S + G A +R + +A Sbjct: 182 KIPKGILMVGPPGTGKTLLARAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQA-- 239 Query: 589 MIKKGKMCCLFINDLDA-----GAGRMGG 660 KK C +FI+++DA GAG GG Sbjct: 240 --KKNAPCLIFIDEIDAVGRQRGAGLGGG 266
>RECA_VIBPA (Q87LR1) Protein recA (Recombinase A)| Length = 347 Score = 31.6 bits (70), Expect = 2.3 Identities = 23/108 (21%), Positives = 44/108 (40%) Frame = +1 Query: 346 PAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 525 P + KL V + ++ P+ L I + + +V + + P GE+ Sbjct: 100 PVYAKKLGVDIDALLVSQPDTG-EQALEICDALARSGAIDVMVVDSVAALTPKAEIEGEM 158 Query: 526 ESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQ 669 + G A+++ Q R+ +K+ C+FIN + G M G + Sbjct: 159 GDSHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPE 206
>RECA_OCEIH (Q8CXG7) Protein recA (Recombinase A)| Length = 347 Score = 31.6 bits (70), Expect = 2.3 Identities = 16/51 (31%), Positives = 25/51 (49%) Frame = +1 Query: 517 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQ 669 GE+ + G A+L+ Q R+ + I K K +FIN + G M G + Sbjct: 155 GEMGDSHVGLQARLMSQALRKLSGAINKSKTTAIFINQIREKVGVMFGNPE 205
>RECA_THETN (Q8RA55) Protein recA (Recombinase A)| Length = 342 Score = 31.6 bits (70), Expect = 2.3 Identities = 17/51 (33%), Positives = 25/51 (49%) Frame = +1 Query: 517 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQ 669 GE+ + G A+L+ Q R+ A + K K +FIN L G M G + Sbjct: 156 GEMGDSHVGLQARLMSQALRKLAGVTSKSKSIVVFINQLREKVGVMFGNPE 206
>RECA_BACSK (Q5WFX1) Protein recA (Recombinase A)| Length = 350 Score = 31.6 bits (70), Expect = 2.3 Identities = 16/51 (31%), Positives = 25/51 (49%) Frame = +1 Query: 517 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQ 669 GE+ + G A+L+ Q R+ + I K K +FIN + G M G + Sbjct: 155 GEMGDSHVGLQARLMSQALRKLSGAINKSKTIAIFINQIREKVGVMFGNPE 205
>RECA_LISWE (Q83TH3) Protein recA (Recombinase A)| Length = 348 Score = 31.6 bits (70), Expect = 2.3 Identities = 16/51 (31%), Positives = 25/51 (49%) Frame = +1 Query: 517 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQ 669 GE+ + G A+L+ Q R+ + I K K +FIN + G M G + Sbjct: 155 GEMGDAHVGLQARLMSQALRKLSGAINKSKTIAIFINQIREKVGVMFGNPE 205
>RECA_LISSE (Q83TH4) Protein recA (Recombinase A)| Length = 348 Score = 31.6 bits (70), Expect = 2.3 Identities = 16/51 (31%), Positives = 25/51 (49%) Frame = +1 Query: 517 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQ 669 GE+ + G A+L+ Q R+ + I K K +FIN + G M G + Sbjct: 155 GEMGDAHVGLQARLMSQALRKLSGAINKSKTIAIFINQIREKVGVMFGNPE 205
>RECA_LISIV (Q83TH2) Protein recA (Recombinase A)| Length = 348 Score = 31.6 bits (70), Expect = 2.3 Identities = 16/51 (31%), Positives = 25/51 (49%) Frame = +1 Query: 517 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQ 669 GE+ + G A+L+ Q R+ + I K K +FIN + G M G + Sbjct: 155 GEMGDAHVGLQARLMSQALRKLSGAINKSKTIAIFINQIREKVGVMFGNPE 205
>RECA_BACHD (Q9KAA7) Protein recA (Recombinase A)| Length = 349 Score = 31.6 bits (70), Expect = 2.3 Identities = 16/51 (31%), Positives = 25/51 (49%) Frame = +1 Query: 517 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQ 669 GE+ + G A+L+ Q R+ + I K K +FIN + G M G + Sbjct: 155 GEMGDSHVGLQARLMSQALRKLSGAINKSKTIAIFINQIREKVGVMFGNPE 205
>PRS7_RAT (Q63347) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 31.6 bits (70), Expect = 2.3 Identities = 19/73 (26%), Positives = 35/73 (47%) Frame = +1 Query: 430 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 609 ++G G GK+ V + I + EL GE A+++R+ + +M + K Sbjct: 213 LFGPPGTGKTLCARAVANRTDACFIPVIGSELVQKYVGEGARMVRELF----EMARTKKA 268 Query: 610 CCLFINDLDAGAG 648 C +F +++DA G Sbjct: 269 CLIFFDEIDAIGG 281
>FTSH_BACSU (P37476) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 31.6 bits (70), Expect = 2.3 Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 5/89 (5%) Frame = +1 Query: 409 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 588 +IP + + G G GK+ + + G+ +S + G A +R + A Sbjct: 192 RIPKGVLLVGPPGTGKTLLAKACAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENA-- 249 Query: 589 MIKKGKMCCLFINDLDA-----GAGRMGG 660 KK C +FI+++DA GAG GG Sbjct: 250 --KKNAPCLIFIDEIDAVGRQRGAGLGGG 276
>SPAST_MOUSE (Q9QYY8) Spastin| Length = 614 Score = 31.2 bits (69), Expect = 3.0 Identities = 23/95 (24%), Positives = 44/95 (46%), Gaps = 9/95 (9%) Frame = +1 Query: 382 KNFMTLPNIKIPLILGI---------WGGKGQGKSFQCELVFAKMGINPIMMSAGELESG 534 + + LP+++ L G+ +G G GK+ + V A+ +SA L S Sbjct: 353 QEIVILPSLRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSK 412 Query: 535 NAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDA 639 GE KL+R + A ++ + +FI+++D+ Sbjct: 413 YVGEGEKLVRALFAVAREL----QPSIIFIDEVDS 443
>RECA_CHLAU (O52394) Protein recA (Recombinase A)| Length = 351 Score = 31.2 bits (69), Expect = 3.0 Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 11/79 (13%) Frame = +1 Query: 466 CELVFAKMGINPIMMSA-----------GELESGNAGEPAKLIRQRYREAADMIKKGKMC 612 CE++ I+ I++ + GE+ G A+L+ Q R+ + I K + Sbjct: 131 CEMLVRSNAIDVIVIDSVAALVPRAEIEGEMGDSMPGMQARLMSQALRKLSGAISKSRTV 190 Query: 613 CLFINDLDAGAGRMGGTTQ 669 +FIN L G M GT + Sbjct: 191 VIFINQLRMKIGVMLGTPE 209
>PRS6A_ARATH (O04019) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 419 Score = 31.2 bits (69), Expect = 3.0 Identities = 20/78 (25%), Positives = 39/78 (50%) Frame = +1 Query: 406 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 585 I+ P + ++G G GK+ A+ + ++ +L G+ AKL+ R+A Sbjct: 197 IRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLV----RDAF 252 Query: 586 DMIKKGKMCCLFINDLDA 639 + K+ C +FI+++DA Sbjct: 253 LLAKEKSPCIIFIDEIDA 270
>RECA_PORGI (P77925) Protein recA (Recombinase A)| Length = 340 Score = 31.2 bits (69), Expect = 3.0 Identities = 16/51 (31%), Positives = 23/51 (45%) Frame = +1 Query: 517 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQ 669 GE+ G A+L+ Q R+ I K C+FIN L G + G + Sbjct: 165 GEMGDNKVGLHARLMSQALRKMTGAISKSNTTCIFINQLREKIGVLFGNPE 215
>RECA_ENTFA (P42444) Protein recA (Recombinase A)| Length = 348 Score = 31.2 bits (69), Expect = 3.0 Identities = 16/51 (31%), Positives = 26/51 (50%) Frame = +1 Query: 517 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQ 669 GE+ + + G A+L+ Q R+ + I K K +FIN + G M G + Sbjct: 156 GEMGASHVGLQARLMSQALRKLSGSINKTKTIAIFINQIREKVGVMFGNPE 206
>FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) (Fragment) Length = 662 Score = 31.2 bits (69), Expect = 3.0 Identities = 26/92 (28%), Positives = 38/92 (41%), Gaps = 5/92 (5%) Frame = +1 Query: 409 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 588 KIP + G G GK+ V + G+ +A E G A +R + A Sbjct: 261 KIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRHLFENA-- 318 Query: 589 MIKKGKMCCLFINDLDA-----GAGRMGGTTQ 669 K C +FI+++DA GAG GG + Sbjct: 319 --KSKAPCIVFIDEIDAVGRQRGAGLGGGNDE 348
>RECA_RHOBA (Q7UJJ0) Protein recA (Recombinase A)| Length = 375 Score = 31.2 bits (69), Expect = 3.0 Identities = 26/119 (21%), Positives = 48/119 (40%), Gaps = 11/119 (9%) Frame = +1 Query: 346 PAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSA--- 516 P++ KL V L ++ P+ G+ CE++ ++ I++ + Sbjct: 123 PSWAKKLGVELDSLLVSQPS------------SGEEAMQICEMLVKSNAVDVIIIDSVAA 170 Query: 517 --------GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQ 669 GE+ + G A+L+ Q R+ I K K +FIN + G M G+ + Sbjct: 171 LVPKAELEGEIGDSHVGLQARLMSQSMRKLTGAIAKSKSAVVFINQIREKVGVMFGSPE 229
>PCRB_SULAC (Q4JAS3) Protein pcrB homolog| Length = 257 Score = 31.2 bits (69), Expect = 3.0 Identities = 17/59 (28%), Positives = 31/59 (52%) Frame = -3 Query: 339 VEASHGVVEVVLPQALADVLVGAEDGLVGAVARGRLEERVHDALPSGDVLLVVGDIVRK 163 +EA G E V P+A+ V +DG+V EER + + +G ++V G+++ + Sbjct: 176 LEAGSGASETVKPEAIKVVKNTVKDGVVIVGGGVTSEERARNLVLAGADIIVTGNVIER 234
>RS3A_PICTO (Q6KYU3) 30S ribosomal protein S3Ae| Length = 209 Score = 31.2 bits (69), Expect = 3.0 Identities = 21/85 (24%), Positives = 45/85 (52%), Gaps = 2/85 (2%) Frame = +1 Query: 4 APASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDISD 183 +PA+ P+ +G+K++ V+ ++ G K++ + + KR T ++ G + +SD Sbjct: 35 SPAADPSLMIGRKVEVPVS---DFTGNFRKSSTMVIFRVKECTGKRCTTEFIG--HKVSD 89 Query: 184 D--QQDITRGKGIVDSLFQAPTGDG 252 D ++ + R K +D + + T DG Sbjct: 90 DTIRRMVRRRKERIDIIMPSKTKDG 114
>PTR2_CANAL (P46030) Peptide transporter PTR2| Length = 623 Score = 31.2 bits (69), Expect = 3.0 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 10/59 (16%) Frame = -1 Query: 251 PSPVGAWKSESTMPFPLVMSCW----SSEISYAR------PFHLSVFLFSSMFSAAMTV 105 P+P+ AWK+ S CW + E++Y R ++FL S FSAA+++ Sbjct: 488 PAPITAWKASSLFILAAAGECWAYTTAYELAYTRSPPALKSLVYALFLVMSAFSAALSL 546
>AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-)| Length = 663 Score = 31.2 bits (69), Expect = 3.0 Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 6/93 (6%) Frame = +1 Query: 409 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGE-LESGNAGEPAKLIRQRYREAA 585 KIP + G G GK+ + + + I ++ E LE PA R R+ Sbjct: 205 KIPKGAMLTGPPGTGKTLLAKATAGEANVPFITVNGSEFLEMFVGVGPA-----RVRDMF 259 Query: 586 DMIKKGKMCCLFINDLDA-----GAGRMGGTTQ 669 M +K C LFI+++DA G G +GG ++ Sbjct: 260 AMARKHAPCILFIDEIDAIGRKRGRGHLGGQSE 292
>SPAST_HUMAN (Q9UBP0) Spastin| Length = 616 Score = 31.2 bits (69), Expect = 3.0 Identities = 23/95 (24%), Positives = 44/95 (46%), Gaps = 9/95 (9%) Frame = +1 Query: 382 KNFMTLPNIKIPLILGI---------WGGKGQGKSFQCELVFAKMGINPIMMSAGELESG 534 + + LP+++ L G+ +G G GK+ + V A+ +SA L S Sbjct: 355 QEIVILPSLRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSK 414 Query: 535 NAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDA 639 GE KL+R + A ++ + +FI+++D+ Sbjct: 415 YVGEGEKLVRALFAVAREL----QPSIIFIDEVDS 445
>PEX1_YEAST (P24004) Peroxisome biosynthesis protein PAS1 (Peroxin-1)| Length = 1043 Score = 30.8 bits (68), Expect = 3.9 Identities = 20/76 (26%), Positives = 36/76 (47%) Frame = +1 Query: 430 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 609 ++G G GK+ V + G+N I + E+ + G + IR+ + A + K Sbjct: 736 LYGYPGCGKTLLASAVAQQCGLNFISVKGPEILNKFIGASEQNIRELFERAQSV----KP 791 Query: 610 CCLFINDLDAGAGRMG 657 C LF ++ D+ A + G Sbjct: 792 CILFFDEFDSIAPKRG 807
>YCF46_ODOSI (P49541) Hypothetical 56.9 kDa protein ycf46 (ORF497)| Length = 497 Score = 30.8 bits (68), Expect = 3.9 Identities = 21/80 (26%), Positives = 38/80 (47%) Frame = +1 Query: 397 LPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYR 576 LP + L++GI +G GKS + + + + + + G L G GE R R Sbjct: 256 LPTPRGLLLIGI---QGTGKSLTAKAIATEWQLPLLKLDVGRLFGGIVGES----ESRLR 308 Query: 577 EAADMIKKGKMCCLFINDLD 636 + D+ + C L+I+++D Sbjct: 309 QMIDVAETLSPCILWIDEMD 328
>PSMR_METAC (Q8TI88) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 421 Score = 30.8 bits (68), Expect = 3.9 Identities = 21/74 (28%), Positives = 36/74 (48%) Frame = +1 Query: 430 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 609 ++G G GK+ + V + I + EL G+ +KL+ RE +M +K Sbjct: 198 LYGLPGTGKTLLAKAVAHRTNATFIRVVGSELVQKYIGDGSKLV----REIFEMARKKAP 253 Query: 610 CCLFINDLDAGAGR 651 +FI++LD+ A R Sbjct: 254 SIIFIDELDSIAAR 267
>RECA_LACPE (Q6KCK3) Protein recA (Recombinase A)| Length = 378 Score = 30.8 bits (68), Expect = 3.9 Identities = 16/51 (31%), Positives = 25/51 (49%) Frame = +1 Query: 517 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQ 669 GE+ + G A+L+ Q R+ + + K K LFIN + G M G + Sbjct: 156 GEMGDAHVGLQARLMSQALRKLSGTLNKTKTIALFINQIREKVGVMFGNPE 206
>RECA_BORBU (Q59180) Protein recA (Recombinase A)| Length = 365 Score = 30.8 bits (68), Expect = 3.9 Identities = 15/59 (25%), Positives = 27/59 (45%) Frame = +1 Query: 493 INPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQ 669 + P + GE+ G A+L+ + R+ ++ K C +FIN + G M G + Sbjct: 164 LTPKLEIDGEMGDSQIGLQARLMSKALRKITGILSKSNTCIMFINQIRMRIGVMFGNPE 222
>PSMR_METMA (Q8PY58) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 420 Score = 30.8 bits (68), Expect = 3.9 Identities = 21/74 (28%), Positives = 36/74 (48%) Frame = +1 Query: 430 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 609 ++G G GK+ + V + I + EL G+ +KL+ RE +M +K Sbjct: 198 LYGLPGTGKTLLAKAVAHRTNATFIRVVGSELVQKYIGDGSKLV----REIFEMARKKAP 253 Query: 610 CCLFINDLDAGAGR 651 +FI++LD+ A R Sbjct: 254 SIIFIDELDSIAAR 267
>AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-)| Length = 802 Score = 30.8 bits (68), Expect = 3.9 Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 6/93 (6%) Frame = +1 Query: 409 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGE-LESGNAGEPAKLIRQRYREAA 585 KIP + G G GK+ + + + I +S E LE PA R R+ Sbjct: 338 KIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPA-----RVRDLF 392 Query: 586 DMIKKGKMCCLFINDLDA-----GAGRMGGTTQ 669 + +K C LFI+++DA G G GG ++ Sbjct: 393 ALARKNAPCILFIDEIDAVGRKRGRGNFGGQSE 425
>RECA_ENTMU (Q6KCJ3) Protein recA (Recombinase A)| Length = 346 Score = 30.8 bits (68), Expect = 3.9 Identities = 16/51 (31%), Positives = 25/51 (49%) Frame = +1 Query: 517 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQ 669 GE+ + G A+L+ Q R+ + I K K +FIN + G M G + Sbjct: 156 GEMGDSHVGLQARLMSQALRKLSGSINKTKTIAIFINQIREKVGVMFGNPE 206
>RECA_ENTHR (Q6KCJ5) Protein recA (Recombinase A)| Length = 346 Score = 30.8 bits (68), Expect = 3.9 Identities = 16/51 (31%), Positives = 25/51 (49%) Frame = +1 Query: 517 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQ 669 GE+ + G A+L+ Q R+ + I K K +FIN + G M G + Sbjct: 156 GEMGDSHVGLQARLMSQALRKLSGSINKTKTIAIFINQIREKVGVMFGNPE 206
>RECA_BORHE (Q8VS69) Protein recA (Recombinase A)| Length = 356 Score = 30.8 bits (68), Expect = 3.9 Identities = 15/51 (29%), Positives = 24/51 (47%) Frame = +1 Query: 517 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQ 669 GE+ G A+L+ + R+ ++ K C +FIN L G M G + Sbjct: 170 GEMGDSQIGLQARLMSKALRKITGILSKSNTCIMFINQLRMKIGVMFGNPE 220
>RECA_LACPL (Q88UZ4) Protein recA (Recombinase A)| Length = 380 Score = 30.8 bits (68), Expect = 3.9 Identities = 16/51 (31%), Positives = 25/51 (49%) Frame = +1 Query: 517 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQ 669 GE+ + G A+L+ Q R+ + + K K LFIN + G M G + Sbjct: 156 GEMGDAHVGLQARLMSQALRKLSGTLNKTKTIALFINQIREKVGVMFGNPE 206
>RECA_LACAC (Q5FL82) Protein recA (Recombinase A)| Length = 363 Score = 30.8 bits (68), Expect = 3.9 Identities = 16/51 (31%), Positives = 25/51 (49%) Frame = +1 Query: 517 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQ 669 GE+ + G A+L+ Q R+ + I K K +FIN + G M G + Sbjct: 157 GEMGDAHVGLQARLMSQALRKLSGTISKTKTIAIFINQIREKVGVMFGNPE 207
>RPK1_IPONI (P93194) Receptor-like protein kinase precursor (EC 2.7.11.1)| Length = 1109 Score = 30.8 bits (68), Expect = 3.9 Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%) Frame = -3 Query: 585 CSLTVPLPDELGWLSSVPTLQLSGTHHDG-VDAHLGEHKLTLE 460 C+L+ P+P G L+ + TL L+G H G + LG+ K ++ Sbjct: 294 CALSGPIPSCFGQLTKLDTLYLAGNHFSGRIPPELGKCKSMID 336
>RECA_ENTFC (Q6KCJ6) Protein recA (Recombinase A)| Length = 349 Score = 30.8 bits (68), Expect = 3.9 Identities = 16/51 (31%), Positives = 25/51 (49%) Frame = +1 Query: 517 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQ 669 GE+ + G A+L+ Q R+ + I K K +FIN + G M G + Sbjct: 156 GEMGDSHVGLQARLMSQALRKLSGSINKTKTIAIFINQIREKVGVMFGNPE 206
>RECA_BORGA (Q662N0) Protein recA (Recombinase A)| Length = 362 Score = 30.8 bits (68), Expect = 3.9 Identities = 15/59 (25%), Positives = 27/59 (45%) Frame = +1 Query: 493 INPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQ 669 + P + GE+ G A+L+ + R+ ++ K C +FIN + G M G + Sbjct: 164 LTPKLEIDGEMGDSQIGLQARLMSKSLRKITGILSKSNTCIMFINQIRMRIGIMFGNPE 222
>CLPX_BIFLO (Q8G5R1) ATP-dependent Clp protease ATP-binding subunit clpX| Length = 472 Score = 30.8 bits (68), Expect = 3.9 Identities = 20/79 (25%), Positives = 41/79 (51%), Gaps = 2/79 (2%) Frame = +1 Query: 436 GGKGQGKSFQCELVFAKMGINPIMMSAGEL-ESGNAGEPAKLIRQRYREAAD-MIKKGKM 609 G G GK++ + + M + ++ A L E+G G+ + + QR +AAD + + + Sbjct: 154 GPTGVGKTYLAQALARVMNVPFVITDATTLTEAGYVGDDVETVLQRLLQAADGDVSRAQH 213 Query: 610 CCLFINDLDAGAGRMGGTT 666 ++I+++D A + G T Sbjct: 214 GIIYIDEIDKIARKSGENT 232
>AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Paraplegin-like| protein) Length = 797 Score = 30.8 bits (68), Expect = 3.9 Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 6/93 (6%) Frame = +1 Query: 409 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGE-LESGNAGEPAKLIRQRYREAA 585 KIP + G G GK+ + + + I +S E LE PA R R+ Sbjct: 339 KIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPA-----RVRDLF 393 Query: 586 DMIKKGKMCCLFINDLDA-----GAGRMGGTTQ 669 + +K C LFI+++DA G G GG ++ Sbjct: 394 ALARKNAPCILFIDEIDAVGRKRGRGNFGGQSE 426
>FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)| Length = 613 Score = 30.4 bits (67), Expect = 5.1 Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 5/89 (5%) Frame = +1 Query: 409 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 588 KIP + + G G GK+ + + + + +S + G A +R + A Sbjct: 183 KIPKGILMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEHA-- 240 Query: 589 MIKKGKMCCLFINDLDA-----GAGRMGG 660 +K C +FI+++DA GAG GG Sbjct: 241 --RKSAPCIIFIDEIDAVGRQRGAGLGGG 267
>KADC2_ARATH (Q9FIJ7) Probable adenylate kinase 2, chloroplast precursor (EC| 2.7.4.3) (ATP-AMP transphosphorylase) Length = 283 Score = 30.4 bits (67), Expect = 5.1 Identities = 20/65 (30%), Positives = 33/65 (50%) Frame = +1 Query: 415 PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMI 594 PL + I G GK QCEL+ K G+ + +SAG+L + + R A + + Sbjct: 64 PLKIMISGAPASGKGTQCELITHKYGL--VHISAGDLLRAEIASGS----ENGRRAKEHM 117 Query: 595 KKGKM 609 +KG++ Sbjct: 118 EKGQL 122
>UMPK_ARATH (O04905) Uridylate kinase (EC 2.7.4.-) (UK) (Uridine monophosphate| kinase) (UMP kinase) (UMP/CMP kinase) Length = 202 Score = 30.4 bits (67), Expect = 5.1 Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 3/70 (4%) Frame = +1 Query: 409 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL---ESGNAGEPAKLIRQRYRE 579 K P ++ + GG G GK QC + G +SAG+L E + E +I+ Sbjct: 12 KKPTVIFVLGGPGSGKGTQCAYIVEHYGYT--HLSAGDLLRAEIKSGSENGTMIQ----- 64 Query: 580 AADMIKKGKM 609 +MIK+GK+ Sbjct: 65 --NMIKEGKI 72
>RECA_PSEOL (Q9R9U2) Protein recA (Recombinase A)| Length = 348 Score = 30.4 bits (67), Expect = 5.1 Identities = 14/51 (27%), Positives = 24/51 (47%) Frame = +1 Query: 517 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQ 669 GE+ + G A+++ Q R+ +K C+FIN + G M G + Sbjct: 156 GEIGDSHVGLAARMMSQAMRKITGNLKNSNTMCIFINQIRMKIGVMFGNPE 206
>PRS6A_YEAST (P33297) 26S protease regulatory subunit 6A (TAT-binding protein| homolog 1) (TBP-1) Length = 434 Score = 30.4 bits (67), Expect = 5.1 Identities = 22/78 (28%), Positives = 38/78 (48%) Frame = +1 Query: 406 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 585 I+ P ++G G GK+ A+ + ++A +L GE AKL+ R+A Sbjct: 212 IRAPKGALMYGPPGTGKTLLARACAAQTNATFLKLAAPQLVQMYIGEGAKLV----RDAF 267 Query: 586 DMIKKGKMCCLFINDLDA 639 + K+ +FI++LDA Sbjct: 268 ALAKEKAPTIIFIDELDA 285
>RECA_PHOPR (Q6LMU2) Protein recA (Recombinase A)| Length = 352 Score = 30.4 bits (67), Expect = 5.1 Identities = 14/51 (27%), Positives = 24/51 (47%) Frame = +1 Query: 517 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQ 669 GE+ + G A+++ Q R+ +K C+FIN + G M G + Sbjct: 156 GEMGDSHMGLQARMLSQAMRKLTGNLKNANCMCIFINQIRMKIGVMFGNPE 206
>TRPC_HALVO (P18304) Indole-3-glycerol phosphate synthase (EC 4.1.1.48) (IGPS)| Length = 251 Score = 30.4 bits (67), Expect = 5.1 Identities = 26/95 (27%), Positives = 42/95 (44%) Frame = -3 Query: 444 LASPDTQDEWDLDVGQGHEVFGEMDNKLVHESRSDVEASHGVVEVVLPQALADVLVGAED 265 L T++E + G ++ G + L +E G E + P+A DVL+ AE Sbjct: 158 LVEVHTREELTAALAAGADIVGINNRDL-----GKLEVDLGTFEELAPEAPEDVLLVAES 212 Query: 264 GLVGAVARGRLEERVHDALPSGDVLLVVGDIVRKT 160 G+ R+ E DAL G ++ GD+ + T Sbjct: 213 GVQTVDDARRMREAGADALLVGTAIM-DGDVRQNT 246
>ACCA_STRT2 (Q5M5R1) Acetyl-coenzyme A carboxylase carboxyl transferase subunit| alpha (EC 6.4.1.2) (Acetyl-CoA carboxylase carboxyltransferase subunit alpha) (ACCase subunit alpha) Length = 256 Score = 30.4 bits (67), Expect = 5.1 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 3/89 (3%) Frame = +1 Query: 196 ITRGKGIVDSL---FQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKL 366 I +GK + D+L F P +G +A+ + G F NT G + A Sbjct: 62 IQKGKNLQDNLNRNFGQPHPEGYRKALRLMKQAEKFGRSVVTFINTAGAYPGVGAEERGQ 121 Query: 367 VVHLSKNFMTLPNIKIPLILGIWGGKGQG 453 +++N M + ++K+P+I I G G G Sbjct: 122 GEAIARNLMEMSDLKVPIIAIIIGEGGSG 150
>TERA1_CAEEL (P54811) Transitional endoplasmic reticulum ATPase homolog 1| (p97/CDC48 homolog 1) Length = 809 Score = 30.4 bits (67), Expect = 5.1 Identities = 21/78 (26%), Positives = 39/78 (50%) Frame = +1 Query: 406 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 585 IK P + ++G G GK+ V + G +++ E+ S +GE +R+ + E Sbjct: 241 IKPPRGILLFGPPGTGKTLIARAVANETGSFFFLINGPEVMSKMSGESESNLRKAFEEC- 299 Query: 586 DMIKKGKMCCLFINDLDA 639 +K + LFI+++DA Sbjct: 300 ---EKNQPAILFIDEIDA 314
>RECA_LACHE (Q02348) Protein recA (Recombinase A) (Fragment)| Length = 104 Score = 30.4 bits (67), Expect = 5.1 Identities = 16/48 (33%), Positives = 24/48 (50%) Frame = +1 Query: 517 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGG 660 GE+ + G A+L+ Q R+ + I K K +FIN + G M G Sbjct: 56 GEMGDAHVGLQARLMSQALRKLSGTISKTKTIAIFINQIREKVGIMFG 103
>RECA1_MYXXA (P48291) Protein recA 1 (Recombinase A 1)| Length = 342 Score = 30.0 bits (66), Expect = 6.7 Identities = 14/51 (27%), Positives = 24/51 (47%) Frame = +1 Query: 517 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQ 669 GE+ + G A+L+ Q R+ + + C +FIN + G M G + Sbjct: 159 GEMGDAHMGVQARLMSQALRKLTGAVSRSGTCIIFINQIRMKIGVMFGNPE 209
>Y1420_RALSO (Q8XZH5) UPF0085 protein RSc1420| Length = 279 Score = 30.0 bits (66), Expect = 6.7 Identities = 33/102 (32%), Positives = 41/102 (40%), Gaps = 6/102 (5%) Frame = -3 Query: 630 IVDEEA------AHLTLLDHVCSLTVPLPDELGWLSSVPTLQLSGTHHDGVDAHLGEHKL 469 +VD EA A T+LD + PL ELG SS G H D +K Sbjct: 77 LVDAEANRIVHQARATILDMFQTFIEPLERELGLKSS----HAIGRFHQNADTEA--YKN 130 Query: 468 TLE*FSLTLASPDTQDEWDLDVGQGHEVFGEMDNKLVHESRS 343 +E + +LA D GQ H+ E D LV SRS Sbjct: 131 RIEAINFSLAHDD---------GQSHKNLAEADVILVGVSRS 163
>COAE_CHLTE (Q8KD46) Dephospho-CoA kinase (EC 2.7.1.24) (Dephosphocoenzyme A| kinase) Length = 208 Score = 30.0 bits (66), Expect = 6.7 Identities = 13/28 (46%), Positives = 21/28 (75%) Frame = +1 Query: 409 KIPLILGIWGGKGQGKSFQCELVFAKMG 492 ++PL++G+ GG G GKS C ++ A+MG Sbjct: 4 RLPLLVGVTGGIGSGKSTVCAML-AEMG 30
>RECA_STRRM (P95846) Protein recA (Recombinase A)| Length = 376 Score = 30.0 bits (66), Expect = 6.7 Identities = 15/51 (29%), Positives = 25/51 (49%) Frame = +1 Query: 517 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQ 669 GE+ + G A+L+ Q R+ + + K +FIN L G M G+ + Sbjct: 157 GEMGDSHVGLQARLMSQALRKITSALNQSKTTAIFINQLREKIGVMFGSPE 207
>RECA_STRVL (P48295) Protein recA (Recombinase A)| Length = 377 Score = 30.0 bits (66), Expect = 6.7 Identities = 15/51 (29%), Positives = 25/51 (49%) Frame = +1 Query: 517 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQ 669 GE+ + G A+L+ Q R+ + + K +FIN L G M G+ + Sbjct: 157 GEMGDSHVGLQARLMSQALRKITSALNQSKTTAIFINQLREKIGVMFGSPE 207
>RECA_STRAW (Q82KB1) Protein recA (Recombinase A)| Length = 377 Score = 30.0 bits (66), Expect = 6.7 Identities = 15/51 (29%), Positives = 25/51 (49%) Frame = +1 Query: 517 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQ 669 GE+ + G A+L+ Q R+ + + K +FIN L G M G+ + Sbjct: 157 GEMGDSHVGLQARLMSQALRKITSALNQSKTTAIFINQLREKIGVMFGSPE 207
>RECA_ENTGA (Q6KCK0) Protein recA (Recombinase A)| Length = 348 Score = 30.0 bits (66), Expect = 6.7 Identities = 16/51 (31%), Positives = 25/51 (49%) Frame = +1 Query: 517 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQ 669 GE+ + G A+L+ Q R+ + I K K +FIN + G M G + Sbjct: 156 GEMGDTHVGLQARLMSQALRKLSGSINKTKTIAIFINQIREKVGIMFGNPE 206
>VPG_BLRV (P19127) Putative genome-linked protein precursor (VPG) (16 kDa| protein) (ORF 2) Length = 142 Score = 30.0 bits (66), Expect = 6.7 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Frame = -1 Query: 494 MPILANTSSHWNDFP*PL-PPQIPKMSGILMLGRVMKFLERWTTSLS 357 M I++ TSS W P PL PPQ+P + ++ R + + T S S Sbjct: 49 MSIISRTSS-WRTSPRPLPPPQVPSLMNSILTSRTQQSSPKLTNSAS 94
>RECA_STRCT (P41055) Protein recA (Recombinase A) (Fragment)| Length = 142 Score = 30.0 bits (66), Expect = 6.7 Identities = 15/51 (29%), Positives = 25/51 (49%) Frame = +1 Query: 517 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQ 669 GE+ + G A+L+ Q R+ + + K +FIN L G M G+ + Sbjct: 89 GEMGDSHVGLQARLMSQALRKITSALNQSKTTAIFINQLREKIGVMFGSPE 139
>PRMA_LEGPH (Q5ZYB1) Ribosomal protein L11 methyltransferase (EC 2.1.1.-) (L11| Mtase) Length = 289 Score = 30.0 bits (66), Expect = 6.7 Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 5/83 (6%) Frame = -3 Query: 411 LDVGQGHEVFGEMDNKLVHESRSDVEASH---GVVEVVLPQALADV--LVGAEDGLVGAV 247 + +G H ++DN+ + ++S+ A+H + + P+AL + LV A L + Sbjct: 174 IKLGAKHVYAVDIDNQALQATQSNAHANHITESQLSISFPEALQNPVHLVIANILLAPLI 233 Query: 246 ARGRLEERVHDALPSGDVLLVVG 178 + L+ER H LPSG L+ G Sbjct: 234 S---LKERFHQLLPSGAHLVTSG 253
>RECA_STRAM (P41054) Protein recA (Recombinase A)| Length = 372 Score = 30.0 bits (66), Expect = 6.7 Identities = 15/51 (29%), Positives = 25/51 (49%) Frame = +1 Query: 517 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQ 669 GE+ + G A+L+ Q R+ + + K +FIN L G M G+ + Sbjct: 157 GEMGDSHVGLQARLMSQALRKITSALNQSKTTAIFINQLREKIGVMFGSPE 207
>KAD1_HUMAN (P00568) Adenylate kinase isoenzyme 1 (EC 2.7.4.3) (ATP-AMP| transphosphorylase) (AK1) (Myokinase) Length = 194 Score = 30.0 bits (66), Expect = 6.7 Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 3/71 (4%) Frame = +1 Query: 406 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIM---MSAGELESGNAGEPAKLIRQRYR 576 +K I+ + GG G GK QCE + K G + + E+ SG+A R + Sbjct: 5 LKKTKIIFVVGGPGSGKGTQCEKIVQKYGYTHLSTGDLLRSEVSSGSA---------RGK 55 Query: 577 EAADMIKKGKM 609 + +++++KG++ Sbjct: 56 KLSEIMEKGQL 66
>FTSH_STRR6 (P59652) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 652 Score = 30.0 bits (66), Expect = 6.7 Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 5/92 (5%) Frame = +1 Query: 409 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 588 +IP + + G G GK+ + V + G+ +S + G A +R + +A Sbjct: 218 RIPAGVLLEGPPGTGKTLLAKAVAGEAGVPFFSISGSDFVEMFVGVGASRVRSLFEDA-- 275 Query: 589 MIKKGKMCCLFINDLDA-----GAGRMGGTTQ 669 KK +FI+++DA G G GG + Sbjct: 276 --KKAAPAIIFIDEIDAVGRQRGVGLGGGNDE 305
>FTSH_STRPN (O69076) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 652 Score = 30.0 bits (66), Expect = 6.7 Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 5/92 (5%) Frame = +1 Query: 409 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 588 +IP + + G G GK+ + V + G+ +S + G A +R + +A Sbjct: 218 RIPAGVLLEGPPGTGKTLLAKAVAGEAGVPFFSISGSDFVEMFVGVGASRVRSLFEDA-- 275 Query: 589 MIKKGKMCCLFINDLDA-----GAGRMGGTTQ 669 KK +FI+++DA G G GG + Sbjct: 276 --KKAAPAIIFIDEIDAVGRQRGVGLGGGNDE 305
>ACCA_STRT1 (Q5M174) Acetyl-coenzyme A carboxylase carboxyl transferase subunit| alpha (EC 6.4.1.2) (Acetyl-CoA carboxylase carboxyltransferase subunit alpha) (ACCase subunit alpha) Length = 256 Score = 30.0 bits (66), Expect = 6.7 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 3/89 (3%) Frame = +1 Query: 196 ITRGKGIVDSL---FQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKL 366 I +GK + D+L F P +G +A+ + G F NT G + A Sbjct: 62 IQKGKNLQDNLNRNFGQPHPEGYRKALRLMKQAEKFGRPVVTFINTAGAYPGVGAEERGQ 121 Query: 367 VVHLSKNFMTLPNIKIPLILGIWGGKGQG 453 +++N M + ++K+P+I I G G G Sbjct: 122 GEAIARNLMEMSDLKVPIIAIIIGEGGSG 150
>TERA2_CAEEL (P54812) Transitional endoplasmic reticulum ATPase homolog 2| (p97/CDC48 homolog 2) Length = 810 Score = 30.0 bits (66), Expect = 6.7 Identities = 20/78 (25%), Positives = 38/78 (48%) Frame = +1 Query: 406 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 585 +K P + ++G G GK+ V + G +++ E+ S +GE +R+ + E Sbjct: 240 VKPPRGILLFGPPGTGKTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAEC- 298 Query: 586 DMIKKGKMCCLFINDLDA 639 +K LFI+++DA Sbjct: 299 ---EKNSPAILFIDEIDA 313
>RECA_TREDE (P62221) Protein recA (Recombinase A)| Length = 414 Score = 30.0 bits (66), Expect = 6.7 Identities = 17/59 (28%), Positives = 28/59 (47%) Frame = +1 Query: 493 INPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQ 669 + P AGE+ + G A+L+ Q R+ +I K +FIN + G M G+ + Sbjct: 161 LTPQAEIAGEMGDSHMGLQARLMSQALRKLTAIIGKSNCMIIFINQIRMKIGVMFGSPE 219
>RECA_LACDE (Q02347) Protein recA (Recombinase A) (Fragment)| Length = 104 Score = 30.0 bits (66), Expect = 6.7 Identities = 16/48 (33%), Positives = 24/48 (50%) Frame = +1 Query: 517 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGG 660 GE+ + G A+L+ Q R+ + I K K +FIN + G M G Sbjct: 56 GEMGDSHVGLQARLMSQALRKLSGTIAKTKTIAIFINQIREKVGVMFG 103
>RECA_CLOBE (P42441) Protein recA (Recombinase A) (Fragment)| Length = 104 Score = 30.0 bits (66), Expect = 6.7 Identities = 17/49 (34%), Positives = 24/49 (48%) Frame = +1 Query: 517 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGT 663 GE+ + G A+L+ Q R+ A I K +FIN L G M G+ Sbjct: 56 GEMGDSHIGLQARLMSQALRKLAGTINKTNCVAIFINQLREKLGFMFGS 104
>ACCA_STRR6 (Q8DR13) Acetyl-coenzyme A carboxylase carboxyl transferase subunit| alpha (EC 6.4.1.2) (Acetyl-CoA carboxylase carboxyltransferase subunit alpha) (ACCase subunit alpha) Length = 255 Score = 30.0 bits (66), Expect = 6.7 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 3/89 (3%) Frame = +1 Query: 196 ITRGKGIVDSL---FQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKL 366 I +GK + D+L F P +G +A+ + G F NT G + A Sbjct: 61 IQKGKSLQDNLKRNFGQPHPEGYRKALRLMKQAEKFGRPVVTFINTAGAYPGVGAEERGQ 120 Query: 367 VVHLSKNFMTLPNIKIPLILGIWGGKGQG 453 +++N M + ++K+P+I I G G G Sbjct: 121 GEAIARNLMEMSDLKVPIIAIIIGEGGSG 149
>ACCA_STRPN (Q9FBB7) Acetyl-coenzyme A carboxylase carboxyl transferase subunit| alpha (EC 6.4.1.2) (Acetyl-CoA carboxylase carboxyltransferase subunit alpha) (ACCase subunit alpha) Length = 255 Score = 30.0 bits (66), Expect = 6.7 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 3/89 (3%) Frame = +1 Query: 196 ITRGKGIVDSL---FQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKL 366 I +GK + D+L F P +G +A+ + G F NT G + A Sbjct: 61 IQKGKSLQDNLKRNFGQPHPEGYRKALRLMKQAEKFGRPVVTFINTAGAYPGVGAEERGQ 120 Query: 367 VVHLSKNFMTLPNIKIPLILGIWGGKGQG 453 +++N M + ++K+P+I I G G G Sbjct: 121 GEAIARNLMEMSDLKVPIIAIIIGEGGSG 149
>RECA_STRLI (P48294) Protein recA (Recombinase A)| Length = 374 Score = 30.0 bits (66), Expect = 6.7 Identities = 15/51 (29%), Positives = 25/51 (49%) Frame = +1 Query: 517 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQ 669 GE+ + G A+L+ Q R+ + + K +FIN L G M G+ + Sbjct: 157 GEMGDSHVGLQARLMSQALRKITSALNQSKTTAIFINQLREKIGVMFGSPE 207
>RECA_STRCO (O50487) Protein recA (Recombinase A)| Length = 374 Score = 30.0 bits (66), Expect = 6.7 Identities = 15/51 (29%), Positives = 25/51 (49%) Frame = +1 Query: 517 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQ 669 GE+ + G A+L+ Q R+ + + K +FIN L G M G+ + Sbjct: 157 GEMGDSHVGLQARLMSQALRKITSALNQSKTTAIFINQLREKIGVMFGSPE 207
>RECA_CHRVO (Q7NXL9) Protein recA (Recombinase A)| Length = 350 Score = 29.6 bits (65), Expect = 8.7 Identities = 18/79 (22%), Positives = 35/79 (44%), Gaps = 11/79 (13%) Frame = +1 Query: 466 CELVFAKMGINPIMMSA-----------GELESGNAGEPAKLIRQRYREAADMIKKGKMC 612 C+++ G++ I++ + GE+ + G A+L+ Q R+ IK+ Sbjct: 130 CDMLVRSSGVDVIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGNIKRTNTL 189 Query: 613 CLFINDLDAGAGRMGGTTQ 669 +FIN + G M G + Sbjct: 190 VIFINQIRMKIGVMFGNPE 208
>CDC48_CAPAN (Q96372) Cell division cycle protein 48 homolog| Length = 805 Score = 29.6 bits (65), Expect = 8.7 Identities = 20/78 (25%), Positives = 38/78 (48%) Frame = +1 Query: 406 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 585 +K P + ++G G GK+ V + G ++ E+ S AGE +R+ + EA Sbjct: 239 VKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEA- 297 Query: 586 DMIKKGKMCCLFINDLDA 639 +K +FI+++D+ Sbjct: 298 ---EKNAPSIIFIDEIDS 312
>KAD1_CAEEL (Q20140) Probable adenylate kinase isoenzyme F38B2.4 (EC 2.7.4.3)| (ATP-AMP transphosphorylase) Length = 210 Score = 29.6 bits (65), Expect = 8.7 Identities = 17/47 (36%), Positives = 25/47 (53%) Frame = +1 Query: 385 NFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 525 N L +P+ I GG G GK QC+ + AK G+ +S+G+L Sbjct: 11 NLAPLKAAGVPIFF-IVGGPGSGKGTQCDKIVAKYGLT--HLSSGDL 54
>KATL1_RAT (Q5XIK7) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 488 Score = 29.6 bits (65), Expect = 8.7 Identities = 20/79 (25%), Positives = 37/79 (46%) Frame = +1 Query: 436 GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCC 615 G G GK+ + V + G +S+ L S GE KL+R + +M + Sbjct: 246 GPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLF----EMARFYAPTT 301 Query: 616 LFINDLDAGAGRMGGTTQY 672 +FI+++D+ R G + ++ Sbjct: 302 IFIDEIDSICSRRGTSDEH 320
>KATL1_MOUSE (Q8K0T4) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 488 Score = 29.6 bits (65), Expect = 8.7 Identities = 20/79 (25%), Positives = 37/79 (46%) Frame = +1 Query: 436 GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCC 615 G G GK+ + V + G +S+ L S GE KL+R + +M + Sbjct: 246 GPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLF----EMARFYAPTT 301 Query: 616 LFINDLDAGAGRMGGTTQY 672 +FI+++D+ R G + ++ Sbjct: 302 IFIDEIDSICSRRGTSDEH 320
>FTSH_ODOSI (P49825) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 644 Score = 29.6 bits (65), Expect = 8.7 Identities = 23/97 (23%), Positives = 44/97 (45%), Gaps = 5/97 (5%) Frame = +1 Query: 394 TLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRY 573 T+ KIP + + G G GK+ + + + + ++ E G A +R + Sbjct: 212 TIVGAKIPKGILLVGPPGTGKTLLAKAIANEADVPFFSVAGSEFVEMFIGIGAARVRDLF 271 Query: 574 REAADMIKKGKMCCLFINDLDA-----GAGRMGGTTQ 669 ++A++ C +FI+++DA GAG GG + Sbjct: 272 KKASE----NAPCIVFIDEIDAVGRERGAGVGGGNDE 304
>RECA_RUMAL (P49985) Protein recA (Recombinase A) (Fragment)| Length = 121 Score = 29.6 bits (65), Expect = 8.7 Identities = 16/51 (31%), Positives = 25/51 (49%) Frame = +1 Query: 517 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQ 669 GE+ + G A+L+ Q R+ + I K K +FIN + G M G + Sbjct: 66 GEMGDTHVGLQARLMSQALRKLSGEINKTKTIAIFINQIREKVGVMFGNPE 116
>RECA_CLOPE (P94666) Protein recA (Recombinase A)| Length = 352 Score = 29.6 bits (65), Expect = 8.7 Identities = 16/51 (31%), Positives = 23/51 (45%) Frame = +1 Query: 517 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQ 669 GE+ + G A+L+ Q R+ I K +FIN L G M G + Sbjct: 159 GEMGDSHVGLQARLMSQALRKLTGTINKSNCVVIFINQLREKVGIMFGNPE 209
>KAD1_RABIT (P00569) Adenylate kinase isoenzyme 1 (EC 2.7.4.3) (ATP-AMP| transphosphorylase) (AK1) (Myokinase) Length = 194 Score = 29.6 bits (65), Expect = 8.7 Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 3/71 (4%) Frame = +1 Query: 406 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIM---MSAGELESGNAGEPAKLIRQRYR 576 +K I+ + GG G GK QCE + K G + + E+ SG+A R + Sbjct: 5 LKKAKIIFVVGGPGSGKGTQCEKIVHKYGYTHLSTGDLLRAEVSSGSA---------RGK 55 Query: 577 EAADMIKKGKM 609 + +++++KG++ Sbjct: 56 KLSEIMEKGQL 66
>CD48D_ARATH (Q9SCN8) Putative cell division control protein 48 homolog D| (AtCDC48d) (Transitional endoplasmic reticulum ATPase D) Length = 815 Score = 29.6 bits (65), Expect = 8.7 Identities = 20/78 (25%), Positives = 38/78 (48%) Frame = +1 Query: 406 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 585 +K P + ++G G GK+ V + G ++ E+ S AGE +R+ + EA Sbjct: 239 VKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEA- 297 Query: 586 DMIKKGKMCCLFINDLDA 639 +K +FI+++D+ Sbjct: 298 ---EKNAPSIIFIDEIDS 312
>DPO3A_LACLA (Q9CI70) DNA polymerase III alpha subunit (EC 2.7.7.7)| Length = 1060 Score = 29.6 bits (65), Expect = 8.7 Identities = 30/115 (26%), Positives = 46/115 (40%), Gaps = 2/115 (1%) Frame = +1 Query: 70 NYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGD 249 N+H K + + A + D R LAY+++D + D +F A +G Sbjct: 807 NFHKKENILPLIQIGAFDYADSNRGK-----LAYNLADHANLLNYYS---DDIFMASSGG 858 Query: 250 GT--HEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNI 408 G HEA E S+ KYDF+ + G + P + L NF L + Sbjct: 859 GFAYHEA-----EDYSE-TEKYDFEKNLLGIGVTPHPLQNLARRFEGNFTPLAQL 907
>CD48E_ARATH (Q9LZF6) Cell division control protein 48 homolog E (AtCDC48e)| (Transitional endoplasmic reticulum ATPase E) Length = 810 Score = 29.6 bits (65), Expect = 8.7 Identities = 20/78 (25%), Positives = 38/78 (48%) Frame = +1 Query: 406 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 585 +K P + ++G G GK+ V + G ++ E+ S AGE +R+ + EA Sbjct: 238 VKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEA- 296 Query: 586 DMIKKGKMCCLFINDLDA 639 +K +FI+++D+ Sbjct: 297 ---EKNAPSIIFIDEIDS 311
>PSMR_AERPE (Q9YAC7) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 409 Score = 29.6 bits (65), Expect = 8.7 Identities = 21/72 (29%), Positives = 35/72 (48%) Frame = +1 Query: 436 GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCC 615 G G GK+ + V + I + EL + GE A+L+R+ +R A + Sbjct: 180 GPPGTGKTLLAKAVAGETEATFIRVVGSELVNKFIGEGARLVREIFRLAREKAPS----I 235 Query: 616 LFINDLDAGAGR 651 LFI+++DA A + Sbjct: 236 LFIDEIDAIASK 247
>CDC48_SOYBN (P54774) Cell division cycle protein 48 homolog (Valosin-containing| protein homolog) (VCP) Length = 807 Score = 29.6 bits (65), Expect = 8.7 Identities = 20/78 (25%), Positives = 38/78 (48%) Frame = +1 Query: 406 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 585 +K P + ++G G GK+ V + G ++ E+ S AGE +R+ + EA Sbjct: 239 VKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEA- 297 Query: 586 DMIKKGKMCCLFINDLDA 639 +K +FI+++D+ Sbjct: 298 ---EKNAPSIIFIDEIDS 312
>CD48A_ARATH (P54609) Cell division control protein 48 homolog A (AtCDC48a)| Length = 809 Score = 29.6 bits (65), Expect = 8.7 Identities = 20/78 (25%), Positives = 38/78 (48%) Frame = +1 Query: 406 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 585 +K P + ++G G GK+ V + G ++ E+ S AGE +R+ + EA Sbjct: 238 VKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEA- 296 Query: 586 DMIKKGKMCCLFINDLDA 639 +K +FI+++D+ Sbjct: 297 ---EKNAPSIIFIDEIDS 311
>KATL1_HUMAN (Q9BW62) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 490 Score = 29.6 bits (65), Expect = 8.7 Identities = 20/79 (25%), Positives = 37/79 (46%) Frame = +1 Query: 436 GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCC 615 G G GK+ + V + G +S+ L S GE KL+R + +M + Sbjct: 248 GPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLF----EMARFYAPTT 303 Query: 616 LFINDLDAGAGRMGGTTQY 672 +FI+++D+ R G + ++ Sbjct: 304 IFIDEIDSICSRRGTSDEH 322 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.317 0.136 0.399 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 96,021,556 Number of Sequences: 219361 Number of extensions: 2097640 Number of successful extensions: 7182 Number of sequences better than 10.0: 191 Number of HSP's better than 10.0 without gapping: 6895 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7151 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6598423128 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
