ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal35n21 |
|---|---|
| Clone Library Name | barley_pub |
>CHS5_SCHPO (Q92357) Probable chitin biosynthesis protein C6G9.12 (CHS5| homolog) Length = 620 Score = 32.3 bits (72), Expect = 1.4 Identities = 24/102 (23%), Positives = 44/102 (43%), Gaps = 2/102 (1%) Frame = -2 Query: 643 IHMSNVNQMGGSPKRARVEDTEDEHDDAARNL--DELIAAADQANKETIDKEFHEEMPIQ 470 + NVN+ +P+ +ED ++E++ AA +L E + + K T++ +EE Sbjct: 420 VEQINVNEENNTPETEGLEDEKEENNTAAESLINQEETTSGEAVTKSTVESSANEEEAEP 479 Query: 469 GRSADGRRWIYGPDSALNTEVPSYDLGIENDEQVQPEARELT 344 + S LN E P+ + +E + A LT Sbjct: 480 NEIIEEN----AVKSLLNQEGPATNEEVEKNNANSENANGLT 517
>FTSA_STAAW (Q8NX33) Cell division protein ftsA| Length = 470 Score = 32.0 bits (71), Expect = 1.8 Identities = 18/66 (27%), Positives = 36/66 (54%) Frame = -2 Query: 676 SKETDTDHVNVIHMSNVNQMGGSPKRARVEDTEDEHDDAARNLDELIAAADQANKETIDK 497 S+ET+ D ++V N +++GG R + +D H++ + DE I ++ ++E K Sbjct: 386 SEETEEDVIDVKDKDNESKLGGFDWFKRKTNKKDTHENEVESTDEEIYQSEDNHQE--HK 443 Query: 496 EFHEEM 479 + HE + Sbjct: 444 QNHEHV 449
>FTSA_STAAS (Q6GA27) Cell division protein ftsA| Length = 470 Score = 32.0 bits (71), Expect = 1.8 Identities = 18/66 (27%), Positives = 36/66 (54%) Frame = -2 Query: 676 SKETDTDHVNVIHMSNVNQMGGSPKRARVEDTEDEHDDAARNLDELIAAADQANKETIDK 497 S+ET+ D ++V N +++GG R + +D H++ + DE I ++ ++E K Sbjct: 386 SEETEEDVIDVKDKDNESKLGGFDWFKRKTNKKDTHENEVESTDEEIYQSEDNHQE--HK 443 Query: 496 EFHEEM 479 + HE + Sbjct: 444 QNHEHV 449
>Y3605_XANCP (Q8P4V1) Putative NADH dehydrogenase/NAD(P)H nitroreductase XCC3605| (EC 1.-.-.-) Length = 196 Score = 31.2 bits (69), Expect = 3.0 Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 4/68 (5%) Frame = -2 Query: 613 GSPKRARVEDTEDEHDDAARNLDELIAAADQANKET----IDKEFHEEMPIQGRSADGRR 446 GSP R T + + L E AA A T D++FHE++P AD + Sbjct: 49 GSPARFVFVTTAEGKEKLKPALSEGNAAKTLAAPVTAIIGFDEDFHEKLPYLFPHADAKS 108 Query: 445 WIYGPDSA 422 W GP +A Sbjct: 109 WFDGPRTA 116
>FTSA_STAAN (P63765) Cell division protein ftsA| Length = 470 Score = 30.8 bits (68), Expect = 4.0 Identities = 17/66 (25%), Positives = 36/66 (54%) Frame = -2 Query: 676 SKETDTDHVNVIHMSNVNQMGGSPKRARVEDTEDEHDDAARNLDELIAAADQANKETIDK 497 ++ET+ D ++V N +++GG R + +D H++ + DE I ++ ++E K Sbjct: 386 NEETEEDVIDVKDKDNESKLGGFDWFKRKTNKKDTHENEVESTDEEIYQSEDNHQE--HK 443 Query: 496 EFHEEM 479 + HE + Sbjct: 444 QNHEHV 449
>FTSA_STAAM (P63764) Cell division protein ftsA| Length = 470 Score = 30.8 bits (68), Expect = 4.0 Identities = 17/66 (25%), Positives = 36/66 (54%) Frame = -2 Query: 676 SKETDTDHVNVIHMSNVNQMGGSPKRARVEDTEDEHDDAARNLDELIAAADQANKETIDK 497 ++ET+ D ++V N +++GG R + +D H++ + DE I ++ ++E K Sbjct: 386 NEETEEDVIDVKDKDNESKLGGFDWFKRKTNKKDTHENEVESTDEEIYQSEDNHQE--HK 443 Query: 496 EFHEEM 479 + HE + Sbjct: 444 QNHEHV 449
>FTSA_STAAC (Q5HGP6) Cell division protein ftsA| Length = 470 Score = 30.8 bits (68), Expect = 4.0 Identities = 17/66 (25%), Positives = 36/66 (54%) Frame = -2 Query: 676 SKETDTDHVNVIHMSNVNQMGGSPKRARVEDTEDEHDDAARNLDELIAAADQANKETIDK 497 ++ET+ D ++V N +++GG R + +D H++ + DE I ++ ++E K Sbjct: 386 NEETEEDVIDVKDKDNESKLGGFDWFKRKTNKKDTHENEVESTDEEIYQSEDNHQE--HK 443 Query: 496 EFHEEM 479 + HE + Sbjct: 444 QNHEHV 449
>FTSA_STAAU (O07325) Cell division protein ftsA| Length = 471 Score = 30.8 bits (68), Expect = 4.0 Identities = 17/66 (25%), Positives = 36/66 (54%) Frame = -2 Query: 676 SKETDTDHVNVIHMSNVNQMGGSPKRARVEDTEDEHDDAARNLDELIAAADQANKETIDK 497 ++ET+ D ++V N +++GG R + +D H++ + DE I ++ ++E K Sbjct: 387 NEETEEDVIDVKDKDNESKLGGFDWFKRKTNKKDTHENEVESTDEEIYQSEDNHQE--HK 444 Query: 496 EFHEEM 479 + HE + Sbjct: 445 QNHEHV 450
>FTSA_STAAR (Q6GHQ0) Cell division protein ftsA| Length = 468 Score = 30.4 bits (67), Expect = 5.2 Identities = 17/66 (25%), Positives = 36/66 (54%) Frame = -2 Query: 676 SKETDTDHVNVIHMSNVNQMGGSPKRARVEDTEDEHDDAARNLDELIAAADQANKETIDK 497 ++ET+ D ++V N +++GG R + +D H++ + DE I ++ ++E K Sbjct: 386 NEETEEDVIDVKDKDNESKLGGFDWFKRKTNKKDTHENEVESSDEEIYQSEDNHQE--HK 443 Query: 496 EFHEEM 479 + HE + Sbjct: 444 QNHEHV 449
>FKBP4_ASPFU (Q4WMV5) FK506-binding protein 4 (EC 5.2.1.8) (Peptidyl-prolyl| cis-trans isomerase) (PPIase) (Rotamase) Length = 489 Score = 30.0 bits (66), Expect = 6.7 Identities = 16/53 (30%), Positives = 24/53 (45%) Frame = -2 Query: 604 KRARVEDTEDEHDDAARNLDELIAAADQANKETIDKEFHEEMPIQGRSADGRR 446 K +D ED+ D LDE++ T+D E H + P+ A+G R Sbjct: 139 KAPATDDDEDDESDEGLELDEMVVC-------TLDPERHCQQPLDITVAEGER 184
>YSX1_CAEEL (Q10020) Hypothetical protein T28D9.1| Length = 129 Score = 30.0 bits (66), Expect = 6.7 Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 6/78 (7%) Frame = -2 Query: 670 ETDTDHVNVIHMSNVNQMGGSPKRARVEDTEDEHDDAARNLDELIAAADQANKETIDKE- 494 ET +D V VI Q G + + E TE++++ A D+ A + K+T + Sbjct: 25 ETGSDDVVVIDEKTSEQNGEKTEETQAEATEEKNETEAEEADKDKAVENGEAKDTNGNDR 84 Query: 493 -----FHEEMPIQGRSAD 455 HEE P+ D Sbjct: 85 KRVSSAHEEAPVADAEED 102
>DP2L_ARCFU (O28552) DNA polymerase II large subunit (EC 2.7.7.7) (Pol II)| Length = 1143 Score = 29.6 bits (65), Expect = 8.8 Identities = 14/47 (29%), Positives = 23/47 (48%) Frame = -2 Query: 595 RVEDTEDEHDDAARNLDELIAAADQANKETIDKEFHEEMPIQGRSAD 455 R+E+ H+ LD + A+ A K+ +D E E+PI A+ Sbjct: 22 RIEEIRRYHESLMVELDRIYRIAEAARKKGLDPELSVEIPIAKNMAE 68 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 91,719,394 Number of Sequences: 219361 Number of extensions: 1793498 Number of successful extensions: 5061 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 4867 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5057 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6655306086 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
