ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal35n21
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|CP000249.1| Frankia sp. CcI3, complete genome 46 0.15
2ref|XM_396395.2| PREDICTED: Apis mellifera similar to KIAA1573 p... 44 0.59
3gb|AC132345.4| Mus musculus BAC clone RP24-177P9 from chromosome... 42 2.3
4emb|CR954247.1| Pseudoalteromonas haloplanktis str. TAC125 chrom... 42 2.3
5gb|AC092909.6| Homo sapiens 3q BAC RP11-620O17 (Roswell Park Can... 42 2.3
6gb|AC173477.2| Mus musculus BAC clone RP24-344P5 from chromosome... 42 2.3
7gb|DQ079352.1| Drosophila mojavensis strain 15081-1352.02 Acp48 ... 42 2.3
8gb|DQ079351.1| Drosophila mojavensis strain 15081-1352.01 Acp48 ... 42 2.3
9gb|DQ079350.1| Drosophila mojavensis strain 15081-1352.00 Acp48 ... 42 2.3
10gb|DQ079349.1| Drosophila mojavensis strain 15081-1351.14 Acp48 ... 42 2.3
11gb|DQ079348.1| Drosophila mojavensis strain 15081-1351.12 Acp48 ... 42 2.3
12gb|DQ079347.1| Drosophila mojavensis strain 15081-1351.09 Acp48 ... 42 2.3
13gb|DQ079346.1| Drosophila mojavensis strain 15081-1351.03 Acp48 ... 42 2.3
14gb|AC126598.13| Mus musculus chromosome 5, clone RP24-486L9, com... 40 9.3
15gb|BT017055.1| Zea mays clone EL01N0356C10.c mRNA sequence 40 9.3
16gb|AF121351.2| Mus musculus chromosome X clone CT7-228O4 complet... 40 9.3
17gb|AC091473.2| Mus musculus chromosome X clones RP21-114F21, RP2... 40 9.3
18gb|AC141425.3| Mus musculus BAC clone RP23-283P2 from chromosome... 40 9.3
19gb|AC124394.4| Mus musculus BAC clone RP24-335M3 from chromosome... 40 9.3
20gb|AC098727.3| Mus musculus BAC clone RP23-3H16 from 4, complete... 40 9.3
21gb|AC006019.2| Homo sapiens PAC clone RP5-1048B16 from 7, comple... 40 9.3
22gb|AC007964.3| Homo sapiens BAC clone GS1-179L18 from 7, complet... 40 9.3
23gb|AC146555.5| Medicago truncatula clone mth2-10p14, complete se... 40 9.3
24emb|AL590673.6| Human DNA sequence from clone RP11-202K9 on chro... 40 9.3
25ref|XM_785025.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 9.3
26emb|AL160394.19| Human DNA sequence from clone RP11-218I21 on ch... 40 9.3
27dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 9.3
28dbj|AK052676.1| Mus musculus 0 day neonate kidney cDNA, RIKEN fu... 40 9.3
29gb|AC116616.5| Homo sapiens BAC clone RP11-51M24 from 4, complet... 40 9.3
30gb|AC011753.6| Homo sapiens BAC clone RP11-537E18 from 2, comple... 40 9.3
31gb|AC153556.5| Mus musculus 10 BAC RP23-395M5 (Roswell Park Canc... 40 9.3
32gb|AC005035.2| Homo sapiens BAC clone RP11-353P23 from 2, comple... 40 9.3
33gb|AC074117.7| Homo sapiens BAC clone RP11-413M20 from 2, comple... 40 9.3
34gb|AC125345.4| Mus musculus BAC clone RP24-346N18 from 6, comple... 40 9.3
35emb|AL691475.18| Mouse DNA sequence from clone RP23-264P11 on ch... 40 9.3
36gb|AC155172.4| Mus musculus BAC clone RP23-36N9 from chromosome ... 40 9.3
37emb|AL627257.9| Mouse DNA sequence from clone RP23-3L4 on chromo... 40 9.3
38emb|AL672002.14| Mouse DNA sequence from clone RP23-252M19 on ch... 40 9.3
39gb|M65289.1|BACGLDA Bacillus stearothermophilus glycerol dehydro... 40 9.3 
>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                          
Query: 117     cgccgcggcagccgcggaggagagcag 143
               ||||| |||||||||||||||||||||
Sbjct: 1808474 cgccgaggcagccgcggaggagagcag 1808500
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>ref|XM_396395.2| PREDICTED: Apis mellifera similar to KIAA1573 protein (LOC412944),
           mRNA
          Length = 3216

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 642 ataacattaacatgatctgtat 663
           ||||||||||||||||||||||
Sbjct: 740 ataacattaacatgatctgtat 719
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>gb|AC132345.4| Mus musculus BAC clone RP24-177P9 from chromosome 9, complete sequence
          Length = 183638

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 344   tgtcaattctctggcctctgg 364
             |||||||||||||||||||||
Sbjct: 53644 tgtcaattctctggcctctgg 53624
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>emb|CR954247.1| Pseudoalteromonas haloplanktis str. TAC125 chromosome II, complete
              sequence
          Length = 635328

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 372    tgctcatcattttcaatgccg 392
              |||||||||||||||||||||
Sbjct: 256400 tgctcatcattttcaatgccg 256380
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>gb|AC092909.6| Homo sapiens 3q BAC RP11-620O17 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 165589

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 571   gttcatcttctgtatcttcta 591
             |||||||||||||||||||||
Sbjct: 91405 gttcatcttctgtatcttcta 91385
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>gb|AC173477.2| Mus musculus BAC clone RP24-344P5 from chromosome 17, complete sequence
          Length = 155999

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 360   tctggctgcacctgctcatca 380
             |||||||||||||||||||||
Sbjct: 94643 tctggctgcacctgctcatca 94663
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>gb|DQ079352.1| Drosophila mojavensis strain 15081-1352.02 Acp48 (Acp48) gene,
           partial cds
          Length = 516

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 481 tttcttcatgaaattctttat 501
           |||||||||||||||||||||
Sbjct: 498 tttcttcatgaaattctttat 478
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>gb|DQ079351.1| Drosophila mojavensis strain 15081-1352.01 Acp48 (Acp48) gene,
           partial cds
          Length = 516

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 481 tttcttcatgaaattctttat 501
           |||||||||||||||||||||
Sbjct: 498 tttcttcatgaaattctttat 478
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>gb|DQ079350.1| Drosophila mojavensis strain 15081-1352.00 Acp48 (Acp48) gene,
           partial cds
          Length = 516

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 481 tttcttcatgaaattctttat 501
           |||||||||||||||||||||
Sbjct: 498 tttcttcatgaaattctttat 478
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>gb|DQ079349.1| Drosophila mojavensis strain 15081-1351.14 Acp48 (Acp48) gene,
           partial cds
          Length = 517

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 481 tttcttcatgaaattctttat 501
           |||||||||||||||||||||
Sbjct: 499 tttcttcatgaaattctttat 479
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>gb|DQ079348.1| Drosophila mojavensis strain 15081-1351.12 Acp48 (Acp48) gene,
           partial cds
          Length = 516

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 481 tttcttcatgaaattctttat 501
           |||||||||||||||||||||
Sbjct: 498 tttcttcatgaaattctttat 478
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>gb|DQ079347.1| Drosophila mojavensis strain 15081-1351.09 Acp48 (Acp48) gene,
           partial cds
          Length = 516

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 481 tttcttcatgaaattctttat 501
           |||||||||||||||||||||
Sbjct: 498 tttcttcatgaaattctttat 478
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>gb|DQ079346.1| Drosophila mojavensis strain 15081-1351.03 Acp48 (Acp48) gene,
           partial cds
          Length = 517

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 481 tttcttcatgaaattctttat 501
           |||||||||||||||||||||
Sbjct: 499 tttcttcatgaaattctttat 479
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>gb|AC126598.13| Mus musculus chromosome 5, clone RP24-486L9, complete sequence
          Length = 168471

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 281   tgttcatcctggaatggagt 300
             ||||||||||||||||||||
Sbjct: 64100 tgttcatcctggaatggagt 64119
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>gb|BT017055.1| Zea mays clone EL01N0356C10.c mRNA sequence
          Length = 845

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 114 ggtcgccgcggcagccgcgg 133
           ||||||||||||||||||||
Sbjct: 456 ggtcgccgcggcagccgcgg 437
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>gb|AF121351.2| Mus musculus chromosome X clone CT7-228O4 complete sequence
          Length = 123212

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 364   gctgcacctgctcatcattt 383
             ||||||||||||||||||||
Sbjct: 59794 gctgcacctgctcatcattt 59775
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>gb|AC091473.2| Mus musculus chromosome X clones RP21-114F21, RP21-430D6 complete
            sequence
          Length = 221860

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 364  gctgcacctgctcatcattt 383
            ||||||||||||||||||||
Sbjct: 3265 gctgcacctgctcatcattt 3246
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>gb|AC141425.3| Mus musculus BAC clone RP23-283P2 from chromosome 14, complete sequence
          Length = 174986

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 565    cgtcatgttcatcttctgta 584
              ||||||||||||||||||||
Sbjct: 155998 cgtcatgttcatcttctgta 156017
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>gb|AC124394.4| Mus musculus BAC clone RP24-335M3 from chromosome 19, complete sequence
          Length = 171122

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 71    accaccccagatgctggtccaggc 94
             ||||||||||||||||| ||||||
Sbjct: 10644 accaccccagatgctggcccaggc 10667
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>gb|AC098727.3| Mus musculus BAC clone RP23-3H16 from 4, complete sequence
          Length = 231302

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 344   tgtcaattctctggcctctg 363
             ||||||||||||||||||||
Sbjct: 70417 tgtcaattctctggcctctg 70398
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>gb|AC006019.2| Homo sapiens PAC clone RP5-1048B16 from 7, complete sequence
          Length = 124615

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 355    tggcctctggctgcacctgc 374
              ||||||||||||||||||||
Sbjct: 119252 tggcctctggctgcacctgc 119233
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>gb|AC007964.3| Homo sapiens BAC clone GS1-179L18 from 7, complete sequence
          Length = 154706

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 235   agcaaatgtccaatgttgct 254
             ||||||||||||||||||||
Sbjct: 37872 agcaaatgtccaatgttgct 37853
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>gb|AC146555.5| Medicago truncatula clone mth2-10p14, complete sequence
          Length = 127640

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 319   aaacgacagaaagatgagca 338
             ||||||||||||||||||||
Sbjct: 91974 aaacgacagaaagatgagca 91955
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>emb|AL590673.6| Human DNA sequence from clone RP11-202K9 on chromosome 6, complete
              sequence
          Length = 123236

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 636    atatggataacattaacatgatct 659
              ||||| ||||||||||||||||||
Sbjct: 112896 atatgtataacattaacatgatct 112873
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>ref|XM_785025.1| PREDICTED: Strongylocentrotus purpuratus similar to ELOVL family
           member 6, elongation of long chain fatty acids
           (LOC585188), mRNA
          Length = 807

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 480 atttcttcatgaaattcttt 499
           ||||||||||||||||||||
Sbjct: 740 atttcttcatgaaattcttt 759
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>emb|AL160394.19| Human DNA sequence from clone RP11-218I21 on chromosome 13 Contains a
              voltage dependent anion channel protein pseudogene,
              complete sequence
          Length = 168073

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 588    tctacccttgctctttttgg 607
              ||||||||||||||||||||
Sbjct: 112728 tctacccttgctctttttgg 112747
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 76      cccagatgctggtccaggcggtct 99
               |||||||||| |||||||||||||
Sbjct: 3122710 cccagatgctcgtccaggcggtct 3122733
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>dbj|AK052676.1| Mus musculus 0 day neonate kidney cDNA, RIKEN full-length enriched
            library, clone:D630021H01 product:unclassifiable, full
            insert sequence
          Length = 3237

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 364  gctgcacctgctcatcattt 383
            ||||||||||||||||||||
Sbjct: 2167 gctgcacctgctcatcattt 2186
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>gb|AC116616.5| Homo sapiens BAC clone RP11-51M24 from 4, complete sequence
          Length = 94560

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 508  tctctttgtttgcttggtct 527
            ||||||||||||||||||||
Sbjct: 2474 tctctttgtttgcttggtct 2493
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>gb|AC011753.6| Homo sapiens BAC clone RP11-537E18 from 2, complete sequence
          Length = 192802

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 446    tcttctaccatctgctgatc 465
              ||||||||||||||||||||
Sbjct: 137645 tcttctaccatctgctgatc 137626
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>gb|AC153556.5| Mus musculus 10 BAC RP23-395M5 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 184751

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 180   gaatccatcaagcaggtcttgagg 203
             |||||||| |||||||||||||||
Sbjct: 39536 gaatccattaagcaggtcttgagg 39559
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>gb|AC005035.2| Homo sapiens BAC clone RP11-353P23 from 2, complete sequence
          Length = 193708

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 361    ctggctgcacctgctcatca 380
              ||||||||||||||||||||
Sbjct: 169897 ctggctgcacctgctcatca 169878
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>gb|AC074117.7| Homo sapiens BAC clone RP11-413M20 from 2, complete sequence
          Length = 195880

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 347    caattctctggcctctggct 366
              ||||||||||||||||||||
Sbjct: 140526 caattctctggcctctggct 140507
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>gb|AC125345.4| Mus musculus BAC clone RP24-346N18 from 6, complete sequence
          Length = 152279

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 361   ctggctgcacctgctcatca 380
             ||||||||||||||||||||
Sbjct: 42921 ctggctgcacctgctcatca 42940
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>emb|AL691475.18| Mouse DNA sequence from clone RP23-264P11 on chromosome 4 Contains part
              of the Astn2 gene for astrotactin 2 and a CpG island,
              complete sequence
          Length = 174567

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 344    tgtcaattctctggcctctg 363
              ||||||||||||||||||||
Sbjct: 109039 tgtcaattctctggcctctg 109020
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>gb|AC155172.4| Mus musculus BAC clone RP23-36N9 from chromosome 14, complete
           sequence
          Length = 255753

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 565 cgtcatgttcatcttctgta 584
           ||||||||||||||||||||
Sbjct: 599 cgtcatgttcatcttctgta 580
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>emb|AL627257.9| Mouse DNA sequence from clone RP23-3L4 on chromosome 4, complete sequence
          Length = 241053

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 485    ttcatgaaattctttatcaa 504
              ||||||||||||||||||||
Sbjct: 108446 ttcatgaaattctttatcaa 108427
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>emb|AL672002.14| Mouse DNA sequence from clone RP23-252M19 on chromosome X, complete
              sequence
          Length = 225712

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 364    gctgcacctgctcatcattt 383
              ||||||||||||||||||||
Sbjct: 200444 gctgcacctgctcatcattt 200425
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>gb|M65289.1|BACGLDA Bacillus stearothermophilus glycerol dehydrogenase (proposed gld)
            gene, complete cds
          Length = 4161

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 471  tgaattggcatttcttcatg 490
            ||||||||||||||||||||
Sbjct: 1860 tgaattggcatttcttcatg 1879


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,431,501
Number of Sequences: 3902068
Number of extensions: 6431501
Number of successful extensions: 123445
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 123296
Number of HSP's gapped (non-prelim): 149
length of query: 677
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 654
effective length of database: 17,143,297,704
effective search space: 11211716698416
effective search space used: 11211716698416
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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