ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal36c20
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1B2_DAUCA (P37707) B2 protein 211 5e-55
2Y3536_METJA (Q60257) UPF0310 protein MJECL36 33 0.33
3Y1033_PYRHO (O58764) UPF0310 protein PH1033 30 2.2
4Y2356_ARCFU (O30314) UPF0310 protein AF2356 30 3.7
5Y875_PYRAB (Q9V0B5) UPF0310 protein PYRAB08750 29 4.8
6HUTI_RHILO (Q983I1) Imidazolonepropionase (EC 3.5.2.7) (Imidazol... 28 8.2

>B2_DAUCA (P37707) B2 protein|
          Length = 207

 Score =  211 bits (538), Expect = 5e-55
 Identities = 101/123 (82%), Positives = 109/123 (88%)
 Frame = +1

Query: 70  GDNNHGAASEKRFKTLPASEALPRNEPIGGYIFVXNNDTMEENLKRQLFGLPSRYRDSVR 249
           G+N +G   EKRFKTLP +E+LPRNE +GGYIFV NNDTM+ENLKRQLFGLP RYRDSVR
Sbjct: 49  GENKNGV--EKRFKTLPPAESLPRNETVGGYIFVCNNDTMQENLKRQLFGLPPRYRDSVR 106

Query: 250 AIRPGLPLFLYNYSTHQLHGIFEAASFGGANIDPAAWEDKKCNGESRFPAQVRVATRKIC 429
           AI PGLPLFLYNYSTHQLHG+FEAASFGG NIDP AWEDKK  GESRFPAQVRV TRKIC
Sbjct: 107 AITPGLPLFLYNYSTHQLHGVFEAASFGGTNIDPTAWEDKKNQGESRFPAQVRVMTRKIC 166

Query: 430 DPL 438
           +PL
Sbjct: 167 EPL 169



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>Y3536_METJA (Q60257) UPF0310 protein MJECL36|
          Length = 144

 Score = 33.1 bits (74), Expect = 0.33
 Identities = 18/99 (18%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
 Frame = +1

Query: 160 YIFVXNNDTMEENLKRQLFGLPSRYRDSVRAIRPGLPLFLY-------NYSTHQLHGIFE 318
           ++ + N D  +   +++++G+  RY++++  ++ G  L +Y       +Y    + G++E
Sbjct: 4   WLCITNEDNWKVIKEKKIWGVAERYKNTINKVKVGDKLIIYEIQRSGKDYKPPYIRGVYE 63

Query: 319 AASFGGANIDPAAWEDKKCNGESRFPAQVRVATRKICDP 435
             S    +     ++    N   +FP +V++   K+ +P
Sbjct: 64  VVSEVYKD-SSKIFKPTPRNPNEKFPYRVKLKEIKVFEP 101



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>Y1033_PYRHO (O58764) UPF0310 protein PH1033|
          Length = 145

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 20/98 (20%), Positives = 46/98 (46%), Gaps = 9/98 (9%)
 Frame = +1

Query: 160 YIFVXNNDTMEENLKRQLFGLPSRYRDSVRAIRPGLPLFLY---------NYSTHQLHGI 312
           +I + N +  E   +  ++G+P ++++++  ++PG  L +Y         N    ++ GI
Sbjct: 4   WICITNRENWEVIKRHNVWGVPKKHKNTLSRVKPGDKLVIYVRQEKDKEGNLLEPKIVGI 63

Query: 313 FEAASFGGANIDPAAWEDKKCNGESRFPAQVRVATRKI 426
           +E  S     +D +        G+  +P +V++   KI
Sbjct: 64  YEVTS--EPYVDFSRIFKPHRGGKETYPYRVKIKPIKI 99



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>Y2356_ARCFU (O30314) UPF0310 protein AF2356|
          Length = 147

 Score = 29.6 bits (65), Expect = 3.7
 Identities = 18/99 (18%), Positives = 45/99 (45%), Gaps = 8/99 (8%)
 Frame = +1

Query: 160 YIFVXNNDTMEENLKRQLFGLPSRYRDSVRAIRPGLPLFLY--------NYSTHQLHGIF 315
           ++ + N D      ++ ++G+P R+++++  ++ G  L +Y             ++  ++
Sbjct: 4   WLCITNEDNWRVIKEKNIWGVPERHKNTIAKVKKGDKLLIYIKQENVNGEVKPSRIVAVY 63

Query: 316 EAASFGGANIDPAAWEDKKCNGESRFPAQVRVATRKICD 432
           E AS    +     ++  K  G   FP ++++   KI D
Sbjct: 64  ETASEVYRD-SSRIFKSPKGMGNETFPLRIKLKPVKIFD 101



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>Y875_PYRAB (Q9V0B5) UPF0310 protein PYRAB08750|
          Length = 142

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 18/92 (19%), Positives = 41/92 (44%), Gaps = 3/92 (3%)
 Frame = +1

Query: 160 YIFVXNNDTMEENLKRQLFGLPSRYRDSVRAIRPGLPLFLYNYSTHQLHGIFEAASFGGA 339
           ++ + N D  +   ++ ++G+P R+ ++++ ++PG  L  Y     +   + E    G  
Sbjct: 4   WLCITNRDNWKVVKEKNVWGVPRRHENTMKRVKPGDKLVFYVKQESRKGEVLEPMIVGIF 63

Query: 340 NIDPAAWEDKKCNGESRFPAQ---VRVATRKI 426
            +    + D     +S  P +   +RV  R I
Sbjct: 64  EVVSEPYSDSTKIFKSHTPGETYPIRVKIRPI 95



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>HUTI_RHILO (Q983I1) Imidazolonepropionase (EC 3.5.2.7)|
           (Imidazolone-5-propionate hydrolase)
          Length = 409

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 17/48 (35%), Positives = 25/48 (52%)
 Frame = +1

Query: 226 SRYRDSVRAIRPGLPLFLYNYSTHQLHGIFEAASFGGANIDPAAWEDK 369
           +R  D  RA+  GLP+ L+      LHG   AAS+G  + D   + D+
Sbjct: 232 ARVFDKARAL--GLPVKLHADQLSNLHGAALAASYGALSADHLEYTDE 277


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,699,785
Number of Sequences: 219361
Number of extensions: 737437
Number of successful extensions: 1974
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1961
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1973
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2793557952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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